CSPI03G40640 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G40640
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 34818290 .. 34818728 (-)
RNA-Seq ExpressionCSPI03G40640
SyntenyCSPI03G40640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGATACTTGATTTTACAACAAGGTCCACGATCTTGGATGTACTTGGTCTCGCCCCCACCCCGTTATTGTTAACCCTATTAGACACTTGTAAATTTTTAAAACTAACTTATAGATAAGACATAATTAGGTGATTGTACTATTTGGCAATGCAAAGGAAAACAGTAAAATTATTAAGAAAATAATTAGGATTTCTTCTACAAATCTTTTTGAATTTCCTATTTCTTTAAGATTTTCTATTGGGCAGAGATAATGGGCTTGACCTCAACCGAGTTGGAGTGGCCTGAACCAGTCTTGAAACGAAATGGACCGATTGTTGAAGATAGGACAGGTCCATTCTGTTTAGTAGGATGGTGGCCTCAGTTCGGCCGAGGCCGACTAAAGCCAATTGCCTTCAGGCCAATATTGCCTCTATTCTTATGCCTTTTCTTTTTCTCTTAG

mRNA sequence

TAGATACTTGATTTTACAACAAGGTCCACGATCTTGGATGTACTTGGTCTCGCCCCCACCCCGTTATTGTTAACCCTATTAGACACTTGTAAATTTTTAAAACTAACTTATAGATAAGACATAATTAGGTGATTGTACTATTTGGCAATGCAAAGGAAAACAGTAAAATTATTAAGAAAATAATTAGGATTTCTTCTACAAATCTTTTTGAATTTCCTATTTCTTTAAGATTTTCTATTGGGCAGAGATAATGGGCTTGACCTCAACCGAGTTGGAGTGGCCTGAACCAGTCTTGAAACGAAATGGACCGATTGTTGAAGATAGGACAGGTCCATTCTGTTTAGTAGGATGGTGGCCTCAGTTCGGCCGAGGCCGACTAAAGCCAATTGCCTTCAGGCCAATATTGCCTCTATTCTTATGCCTTTTCTTTTTCTCTTAG

Coding sequence (CDS)

ATGGGCTTGACCTCAACCGAGTTGGAGTGGCCTGAACCAGTCTTGAAACGAAATGGACCGATTGTTGAAGATAGGACAGGTCCATTCTGTTTAGTAGGATGGTGGCCTCAGTTCGGCCGAGGCCGACTAAAGCCAATTGCCTTCAGGCCAATATTGCCTCTATTCTTATGCCTTTTCTTTTTCTCTTAG

Protein sequence

MGLTSTELEWPEPVLKRNGPIVEDRTGPFCLVGWWPQFGRGRLKPIAFRPILPLFLCLFFFS*
Homology
[Close]
BLAST of CSPI03G40640 vs. ExPASy TrEMBL
Match: A0A0A0LG94 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842685 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.1e-30
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MGLTSTELEWPEPVLKRNGPIVEDRTGPFCLVGWWPQFGRGRLKPIAFRPILPLFLCLFF 60
          MGLTSTELEWPEPVLKRNGPIVEDRTGPFCLVGWWPQFGRGRLKPIAFRPILPLFLC FF
Sbjct: 1  MGLTSTELEWPEPVLKRNGPIVEDRTGPFCLVGWWPQFGRGRLKPIAFRPILPLFLCPFF 60

Query: 61 FS 63
          FS
Sbjct: 61 FS 62

[Close]
BLAST of CSPI03G40640 vs. NCBI nr
Match: KGN59747.1 (hypothetical protein Csa_001695 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 1.0e-29
Identity = 61/62 (98.39%), Postives = 61/62 (98.39%), Query Frame = 0 

Query: 1  MGLTSTELEWPEPVLKRNGPIVEDRTGPFCLVGWWPQFGRGRLKPIAFRPILPLFLCLFF 60
          MGLTSTELEWPEPVLKRNGPIVEDRTGPFCLVGWWPQFGRGRLKPIAFRPILPLFLC FF
Sbjct: 1  MGLTSTELEWPEPVLKRNGPIVEDRTGPFCLVGWWPQFGRGRLKPIAFRPILPLFLCPFF 60

Query: 61 FS 63
          FS
Sbjct: 61 FS 62

The following BLAST results are available for this feature:
BLAST of CSPI03G40640 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G40640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LG945.1e-3098.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G842685 PE=4 SV=1[more]
BLAST of CSPI03G40640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59747.11.0e-2998.39hypothetical protein Csa_001695 [Cucumis sativus][more]
BLAST of CSPI03G40640 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G40640.1CSPI03G40640.1mRNA