CSPI03G39260 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G39260
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Thioredoxin h
Location	Chr3: 33797451 .. 33800264 (+)
RNA-Seq Expression	CSPI03G39260
Synteny	CSPI03G39260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGTTTTCAATTATATTGTCGATCTTATCTTTCTTCTCACTTCCTTCAATTTATTGGACTGTGGGCAACTAGATGGAGATTCATTTCTCCGCAACTTAGTGCAGCTCATGGAGCCAGCCTTCAACGTCATGGCTGAAAAATGCACTGATGTTGAGTTCGCTAGAATACAGGTTGGTTATATTGCAATAATAAGTAAGTTCAGGTTATATATTATTTTAGTTTAGATTACAATAACATGGTATAATAAGAAAATAGTTAATGTAAAATAGTAAAAACAGTAACAGTATTTACATCCAAACAACTCCTTGTTATCTATCTTTCTTCTTATATTAACAAAAACCTCAAATATAATCATTGATCTGAGGTTATTCGACTTCAAAAGTAGAGATGTTTTAATATTTTACTCCATAGTCAAATTTATAAACATGGTTGGTTGTCATAGAAGTAAACAAAATCTATATTCACGTAACAAAAGGTGAGCAATCTCCCACCTCACCTCAAGGTTAGAGGTTAAAATCTACTTCTAATTAATTTAATATTACAAAGATACAAATTCTAAAGAAATGGAATCATGTTAGATGGTGGTTTATGATATTCATATTCTCAATGACTATATTTTTTGCACTTGAAGAGTTGATACCAGGGATTATCTATTCTTGGAGTGTGCCTTAAATGTGAAGGTATTCCCATTTGATATCGGGATTTACCATTTTAGAAAAAGAAATAATATGAGGTAGAAGGTTTAGAGATTTATTTGGTGTGCAATTCTTTATCTTGTTTAGTGTGAGCACAATGAGCATATCCATGGTTACTTTGTATTCTTCATAGGTAATTAGTCTATATATATATATATACGATATTAGGTTTCTAGATATATTCTAAGTGGATGATTGTTTCTTTTATAAAAAATCAATGAGACTTTTTTTCTTTAAGTGTTTGTTTCTTTTTATTATATCTTTATTTATTTGTAATGTCTGTATCTTGACCTCAGACTGTGAGTTTTTTTTTTCTTAGACAATCGAAACTAGAATTTAAAGGTATTTTTTCTTTTAAGATTTTGGTTGTTTCAAGTTTAGATTTTAAATTGATATAATTTTTTTTATTTTGTTTATATGAAGATATAAATTAATAAATTAACAGGAGTTAGAGTATAATTAATACTCGGTTGGAACAATATTCCAATTTCGCAAGATTGTATTTAGTTTATTGGGCCAAAATGGAATGATAAAAAGGCGATGGGCCCATTTGGTTATCAAAATTCTACGCCGTCGCATCCATTTTTCTTGCGCTACTGAAGGGGAGAGAGAAAGGGAGAAAAATGGGAGTTCTTCTATCAAGAATCGGAGCTCTTCTTTCTAATTGGTTCGGCCCCCCCACGGCCACCGCCGAAGCTGCCTCATCCGACTCATCCTCGGTTCACTCTTTTCACTCCTCAGCCAGATGGCAACTCCACTTCAATTCCCTTCAGGAAACTCCCAAGCTTGTAAGCCTCTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCAATTCCCACTCATTTGATCCAACGCCATTTTTCTAGGGTTACTGTTTCCGATTCTATTGGTGATCTGATCTTTCTTCTCTCTTCCCCTTCGTTTTGTTGGACCCTCGGTGAGTAGATGGTGGTTGATTTCTCCGCAACTTGGTGTGGACCCTGTAGACTCATGGAGCCAGCCTTCAATGCCATGGCTAGCAAATACACTGATGTTGAGTTTGCTAAAATCGACGTCGACGAGTTATCTGTACGTCTCTCTCCTTCTTCCAATTTTGGATTCTCTTATTTCTGTTTGATTCTGCTATTGTAGCTACTTGTACATCTTTGTGGATAATGTGTAATTTAATCTTCCCGTTGCTCAATCTTCAACTGGGGTGATTTTAAACAATACTTGGTGAGTCATCATAAGTTTAGAAAAGGAATTACGAATTGGGCATATAAGAGAACAAAAAGTTGTATTTTTTGCCAACTTCTTAGAAAGTTGAAGGAGAAGTATCAATATAAGGAGAAATCTCCCATCGTAGGAGATACCATTTAAGTTTAGTTTGTCATGAGCCAATATCAATATTGACTTGTGGAAATGATGTTATCGAACATTTTCAAAATGTGCAAACATGGTCATAGCTATTCTCACCTAAAGGTATCTCTAGTCTCACTTGTTGCTGCACTCAAAGAACAAAAAATGTTGAAATTTAGAGATTTTATTGGAACTTTTTGAACGACATGAAGTAAATTTTAAAAGAACACTAGAATATTGGAAACTAAAACATATATTTAGCTGAGATTTAATTGCAAGATTAACGCGGTTATTTGTGGAATCAGGATGTGGCTCAGCATTTCGGAGTACAAGCAATGCCAACATTTGTGTTCCTGAAGAGAGGGAAAGTGGTGGATACAGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTGAGAAGCACCGATCGGTATCTGGTTCAACTTAGATCCAAAAACCCCCAATAATAAGTTATCTCACTCTCACTCTTACTCTTACTCTTCTTTATCTTTTTATGTAAACATTTGAAATTTATCTATATTCTAACTTGGTCACCGGTTTGAATTTAAATATGTCATATAAACTACAACCTTGTTCTTGTTTGAAATCAATCTATCTATCTTATCCCTCCTGTAAAGCGTACCCATTATTGCCTTATTTGGTGTAATGATTTTTTTTATTGATTTCTTTTCTCCTATCCTTCATCTGCAGA

mRNA sequence

CTTGTTTTCAATTATATTGTCGATCTTATCTTTCTTCTCACTTCCTTCAATTTATTGGACTGTGGGCAACTAGATGGAGATTCATTTCTCCGCAACTTAGTGCAGCTCATGGAGCCAGCCTTCAACGTCATGGCTGAAAAATGCACTGATGTTGAGTTCGCTAGAATACAGATATAAATTAATAAATTAACAGGAGTTAGAGTATAATTAATACTCGGTTGGAACAATATTCCAATTTCGCAAGATTGTATTTAGTTTATTGGGCCAAAATGGAATGATAAAAAGGCGATGGGCCCATTTGGTTATCAAAATTCTACGCCGTCGCATCCATTTTTCTTGCGCTACTGAAGGGGAGAGAGAAAGGGAGAAAAATGGGAGTTCTTCTATCAAGAATCGGAGCTCTTCTTTCTAATTGGTTCGGCCCCCCCACGGCCACCGCCGAAGCTGCCTCATCCGACTCATCCTCGGTTCACTCTTTTCACTCCTCAGCCAGATGGCAACTCCACTTCAATTCCCTTCAGGAAACTCCCAAGCTTATGGTGGTTGATTTCTCCGCAACTTGGTGTGGACCCTGTAGACTCATGGAGCCAGCCTTCAATGCCATGGCTAGCAAATACACTGATGTTGAGTTTGCTAAAATCGACGTCGACGAGTTATCTGATGTGGCTCAGCATTTCGGAGTACAAGCAATGCCAACATTTGTGTTCCTGAAGAGAGGGAAAGTGGTGGATACAGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTGAGAAGCACCGATCGGTATCTGGTTCAACTTAGATCCAAAAACCCCCAATAATAAGTTATCTCACTCTCACTCTTACTCTTACTCTTCTTTATCTTTTTATGTAAACATTTGAAATTTATCTATATTCTAACTTGGTCACCGGTTTGAATTTAAATATGTCATATAAACTACAACCTTGTTCTTGTTTGAAATCAATCTATCTATCTTATCCCTCCTGTAAAGCGTACCCATTATTGCCTTATTTGGTGTAATGATTTTTTTTATTGATTTCTTTTCTCCTATCCTTCATCTGCAGA

Coding sequence (CDS)

ATGGGAGTTCTTCTATCAAGAATCGGAGCTCTTCTTTCTAATTGGTTCGGCCCCCCCACGGCCACCGCCGAAGCTGCCTCATCCGACTCATCCTCGGTTCACTCTTTTCACTCCTCAGCCAGATGGCAACTCCACTTCAATTCCCTTCAGGAAACTCCCAAGCTTATGGTGGTTGATTTCTCCGCAACTTGGTGTGGACCCTGTAGACTCATGGAGCCAGCCTTCAATGCCATGGCTAGCAAATACACTGATGTTGAGTTTGCTAAAATCGACGTCGACGAGTTATCTGATGTGGCTCAGCATTTCGGAGTACAAGCAATGCCAACATTTGTGTTCCTGAAGAGAGGGAAAGTGGTGGATACAGTGGTTGGAGCCCGTAAGGAAGAGCTGGAGAAGAAGATTGAGAAGCACCGATCGGTATCTGGTTCAACTTAG

Protein sequence

MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDFSATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVDTVVGARKEELEKKIEKHRSVSGST*

Homology

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BLAST of CSPI03G39260 vs. ExPASy Swiss-Prot
Match: Q38879 (Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2)

HSP 1 Score: 162.5 bits (410), Expect = 3.5e-39
Identity = 78/133 (58.65%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 8   IGALLSNWFGP-PTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDFSATWCG 67
           +G  LS  FG    ATA    S+ S V  F SSARWQLHFN ++E+ KL+VVDFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVDTVVGAR 127
           PCR++EPA +AMA K+ DV+F K+DVDEL DVA+ F V AMPTFV +KRGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIEKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

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BLAST of CSPI03G39260 vs. ExPASy Swiss-Prot
Match: Q851R5 (Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.6e-30
Identity = 69/137 (50.36%), Postives = 90/137 (65.69%), Query Frame = 0


Query: 8   IGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETP-KLMVVDFSATWCG 67
           +G+  S  F PP A   A     S V + HS+A W   + + +  P KL+V+DFSATWCG
Sbjct: 1   MGSFFSTMFTPPPA---ADDGGDSRVVAVHSTATWDEQWGAHKSNPNKLIVIDFSATWCG 60

Query: 68  PCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVDTVVGAR 127
           PCR +EPAF  MA ++ D  F KIDVDELS+VA+ + V+AMPTFV +K GK V  VVGA+
Sbjct: 61  PCRFIEPAFKDMAGRFADAVFFKIDVDELSEVARQWKVEAMPTFVLIKGGKEVSRVVGAK 120

Query: 128 KEELEKKIEKHRSVSGS 144
           K+ELE+K+    S S S
Sbjct: 121 KDELERKVNMFISSSSS 134

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BLAST of CSPI03G39260 vs. ExPASy Swiss-Prot
Match: Q6Z4I3 (Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-28
Identity = 61/122 (50.00%), Postives = 85/122 (69.67%), Query Frame = 0


Query: 23  AEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDFSATWCGPCRLMEPAFNAMASKY 82
           A       S+V + HS A+W   +++ + T KL+V+DFSA+WCGPC++MEP F  MA ++
Sbjct: 13  AAGEEGGESAVVAVHSKAKWDELWDAHKNTTKLVVIDFSASWCGPCKMMEPVFKEMAGRF 72

Query: 83  TDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVDTVVGARKEELEKKIEKHRSVSG 142
           TDV F K+DVDEL++VA+ + V+AMPTFV  + G+ V  +VGA K+ELEK I   RS S 
Sbjct: 73  TDVAFLKVDVDELAEVARTWRVEAMPTFVLARGGEEVGRIVGADKDELEKTINTLRSSSS 132

Query: 143 ST 145
           ST
Sbjct: 133 ST 134

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BLAST of CSPI03G39260 vs. ExPASy Swiss-Prot
Match: O64394 (Thioredoxin H-type OS=Triticum aestivum OX=4565 PE=2 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 6.8e-27
Identity = 58/118 (49.15%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 20  TATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDFSATWCGPCRLMEPAFNAMA 79
           TATA AA+  +  V S HS  +W +         KL+V+DF+A+WCGPCR+M P F  +A
Sbjct: 7   TATATAAAVGAGEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLA 66

Query: 80  SKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVDTVVGARKEELEKKIEKH 138
            K+    F K+DVDEL  +A+ F V+AMPTF+F+K G V D VVGA KEEL  K+  H
Sbjct: 67  KKFPAAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTTKVGLH 124

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BLAST of CSPI03G39260 vs. ExPASy Swiss-Prot
Match: Q42403 (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.4e-26
Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 37  HSSARWQLHFNSLQETPKLMVVDFSATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELS 96
           H+   W     +  E+ KL+V+DF+ATWC PCR + P F  +A K+ DV F K+DVDEL+
Sbjct: 11  HTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELN 70

Query: 97  DVAQHFGVQAMPTFVFLKRGKVVDTVVGARKEELEKKIEKHRSV 141
            VA+ F VQAMPTF+F+K G++ +TVVGA KEE+   +EKH++V
Sbjct: 71  TVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTV 114

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BLAST of CSPI03G39260 vs. ExPASy TrEMBL
Match: A0A0A0LHT3 (Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_3G827380 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 7.0e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIEKHRSVSGST 145
           TVVGARKEELEKKIEKHRSVSGST
Sbjct: 121 TVVGARKEELEKKIEKHRSVSGST 144

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BLAST of CSPI03G39260 vs. ExPASy TrEMBL
Match: A0A5D3DQ11 (Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008280 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 136/144 (94.44%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVLLSRIGALLSNWFGPPTA AEAASS+ SSV SFHSSARWQLHFNS+QET KLMV+DF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDEL+DVAQHFGVQAMPTFVFLKRGKVVD
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIEKHRSVSGST 145
           TVVGARKEELEKKIEKHRSVSGST
Sbjct: 121 TVVGARKEELEKKIEKHRSVSGST 144

[Close]

BLAST of CSPI03G39260 vs. ExPASy TrEMBL
Match: A0A1S3B804 (thioredoxin H2 OS=Cucumis melo OX=3656 GN=LOC103487024 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 136/144 (94.44%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVLLSRIGALLSNWFGPPTA AEAASS+ SSV SFHSSARWQLHFNS+QET KLMV+DF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDEL+DVAQHFGVQAMPTFVFLKRGKVVD
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIEKHRSVSGST 145
           TVVGARKEELEKKIEKHRSVSGST
Sbjct: 121 TVVGARKEELEKKIEKHRSVSGST 144

[Close]

BLAST of CSPI03G39260 vs. ExPASy TrEMBL
Match: A0A6J1F1R9 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 1.3e-60
Identity = 119/138 (86.23%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVLLS+IGALLSNWFGP TA AE ASS+ SSV SFHSSARWQLHFNS +E+ KLMV+DF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEP+FNAMASKYTDVEF KIDVDELSDVAQ FGVQAMPTF+ L+RGKVVD
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIEKHR 139
           TVVGARKEELEKKI+KHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of CSPI03G39260 vs. ExPASy TrEMBL
Match: A0A6J1EL53 (thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.7e-60
Identity = 118/144 (81.94%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVL S IG L+S WFGP TA+AEAASS+ SSV SFHSSARW+LHF+S+QE+ KLMV+DF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEP+FNAMAS YTDVEF KIDVDELSDVAQ FGVQAMPTFV L+RGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIEKHRSVSGST 145
           TVVGARKEELEKKI+KHRS SG T
Sbjct: 121 TVVGARKEELEKKIQKHRSASGGT 144

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BLAST of CSPI03G39260 vs. NCBI nr
Match: XP_004147463.1 (thioredoxin H2 [Cucumis sativus])

HSP 1 Score: 289.7 bits (740), Expect = 1.4e-74
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIEKHRSVSGST 145
           TVVGARKEELEKKIEKHRSVSGST
Sbjct: 121 TVVGARKEELEKKIEKHRSVSGST 144

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BLAST of CSPI03G39260 vs. NCBI nr
Match: XP_008443435.2 (PREDICTED: thioredoxin H2 [Cucumis melo] >TYK25664.1 thioredoxin H2 [Cucumis melo var. makuwa])

HSP 1 Score: 275.4 bits (703), Expect = 2.8e-70
Identity = 136/144 (94.44%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVLLSRIGALLSNWFGPPTA AEAASS+ SSV SFHSSARWQLHFNS+QET KLMV+DF
Sbjct: 1   MGVLLSRIGALLSNWFGPPTAAAEAASSEPSSVQSFHSSARWQLHFNSVQETSKLMVIDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDEL+DVAQHFGVQAMPTFVFLKRGKVVD
Sbjct: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELADVAQHFGVQAMPTFVFLKRGKVVD 120

Query: 121 TVVGARKEELEKKIEKHRSVSGST 145
           TVVGARKEELEKKIEKHRSVSGST
Sbjct: 121 TVVGARKEELEKKIEKHRSVSGST 144

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BLAST of CSPI03G39260 vs. NCBI nr
Match: XP_038903635.1 (thioredoxin H2 [Benincasa hispida])

HSP 1 Score: 257.3 bits (656), Expect = 7.9e-65
Identity = 125/142 (88.03%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVLLSRIG LLSNWFGPPTA+AEAASS+ SSV SFHSSARWQLH+NS QE+ KLMV+DF
Sbjct: 1   MGVLLSRIGVLLSNWFGPPTASAEAASSEPSSVLSFHSSARWQLHYNSAQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEP+FNAMASKYTDVEF KIDVDELSDVAQHFGVQAMPTFV L++GKVVD
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQHFGVQAMPTFVLLRKGKVVD 120

Query: 121 TVVGARKEELEKKIEKHRSVSG 143
           TVVGARKEELEKKI+KHRS SG
Sbjct: 121 TVVGARKEELEKKIQKHRSASG 142

[Close]

BLAST of CSPI03G39260 vs. NCBI nr
Match: XP_022934421.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023527983.1 thioredoxin H2-like [Cucurbita pepo subsp. pepo] >KAG7017722.1 Thioredoxin H2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 242.3 bits (617), Expect = 2.6e-60
Identity = 119/138 (86.23%), Postives = 128/138 (92.75%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVLLS+IGALLSNWFGP TA AE ASS+ SSV SFHSSARWQLHFNS +E+ KLMV+DF
Sbjct: 1   MGVLLSKIGALLSNWFGPSTARAEDASSEPSSVLSFHSSARWQLHFNSAKESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEP+FNAMASKYTDVEF KIDVDELSDVAQ FGVQAMPTF+ L+RGKVVD
Sbjct: 61  SATWCGPCRLMEPSFNAMASKYTDVEFVKIDVDELSDVAQEFGVQAMPTFMLLRRGKVVD 120

Query: 121 TVVGARKEELEKKIEKHR 139
           TVVGARKEELEKKI+KHR
Sbjct: 121 TVVGARKEELEKKIQKHR 138

[Close]

BLAST of CSPI03G39260 vs. NCBI nr
Match: XP_022928736.1 (thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023531187.1 thioredoxin H2-like isoform X3 [Cucurbita pepo subsp. pepo] >KAG6588389.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022236.1 Thioredoxin H2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 241.9 bits (616), Expect = 3.4e-60
Identity = 118/144 (81.94%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 1   MGVLLSRIGALLSNWFGPPTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDF 60
           MGVL S IG L+S WFGP TA+AEAASS+ SSV SFHSSARW+LHF+S+QE+ KLMV+DF
Sbjct: 1   MGVLFSTIGTLVSKWFGPSTASAEAASSEPSSVSSFHSSARWKLHFDSVQESSKLMVIDF 60

Query: 61  SATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVD 120
           SATWCGPCRLMEP+FNAMAS YTDVEF KIDVDELSDVAQ FGVQAMPTFV L+RGKV+D
Sbjct: 61  SATWCGPCRLMEPSFNAMASTYTDVEFIKIDVDELSDVAQDFGVQAMPTFVLLRRGKVLD 120

Query: 121 TVVGARKEELEKKIEKHRSVSGST 145
           TVVGARKEELEKKI+KHRS SG T
Sbjct: 121 TVVGARKEELEKKIQKHRSASGGT 144

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BLAST of CSPI03G39260 vs. TAIR 10
Match: AT5G39950.1 (thioredoxin 2 )

HSP 1 Score: 162.5 bits (410), Expect = 2.5e-40
Identity = 78/133 (58.65%), Postives = 101/133 (75.94%), Query Frame = 0


Query: 8   IGALLSNWFGP-PTATAEAASSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDFSATWCG 67
           +G  LS  FG    ATA    S+ S V  F SSARWQLHFN ++E+ KL+VVDFSA+WCG
Sbjct: 1   MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCG 60

Query: 68  PCRLMEPAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVDTVVGAR 127
           PCR++EPA +AMA K+ DV+F K+DVDEL DVA+ F V AMPTFV +KRGK ++ ++GA+
Sbjct: 61  PCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAK 120

Query: 128 KEELEKKIEKHRS 140
           K+ELEKK+ K R+
Sbjct: 121 KDELEKKVSKLRA 133

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BLAST of CSPI03G39260 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 2.4e-27
Identity = 55/116 (47.41%), Postives = 82/116 (70.69%), Query Frame = 0


Query: 27  SSDSSSVHSFHSSARWQLHFNSLQETPKLMVVDFSATWCGPCRLMEPAFNAMASKY-TDV 86
           +++   V   H++  W +  +  +E+ KL+V+DF+A+WC PCR++ P FN +A K+ +  
Sbjct: 2   AAEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSA 61

Query: 87  EFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVDTVVGARKEELEKKIEKHRSVS 142
            F K+DVDEL  VA+ FGV+AMPTFVF+K G+VVD +VGA KE+L+ KI KH  V+
Sbjct: 62  IFFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKIVKHTGVT 117

[Close]

BLAST of CSPI03G39260 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 119.4 bits (298), Expect = 2.4e-27
Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 0


Query: 37  HSSARWQLHFNSLQETPKLMVVDFSATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELS 96
           H+   W     +  E+ KL+V+DF+ATWC PCR + P F  +A K+ DV F K+DVDEL+
Sbjct: 11  HTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVVFFKVDVDELN 70

Query: 97  DVAQHFGVQAMPTFVFLKRGKVVDTVVGARKEELEKKIEKHRSV 141
            VA+ F VQAMPTF+F+K G++ +TVVGA KEE+   +EKH++V
Sbjct: 71  TVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTV 114

[Close]

BLAST of CSPI03G39260 vs. TAIR 10
Match: AT1G59730.1 (thioredoxin H-type 7 )

HSP 1 Score: 118.2 bits (295), Expect = 5.3e-27
Identity = 58/126 (46.03%), Postives = 82/126 (65.08%), Query Frame = 0


Query: 28  SDSSSVHSFHSS---------------ARWQLHFNSLQETPKLMVVDFSATWCGPCRLME 87
           S+ SSVH  HSS                +W+  F+S++ + KL+V+DF+A WCGPC+ ME
Sbjct: 3   SNVSSVHDVHSSMEITSNGFVVEIESRRQWKSLFDSMKGSNKLLVIDFTAVWCGPCKAME 62

Query: 88  PAFNAMASKYTDVEFAKIDVDELSDVAQHFGVQAMPTFVFLKRGKVVDTVVGARKEELEK 139
           P    +ASKY++  FA++DVD L DVA  +    +P FVF+KRG+ +D VVGA+ +EL K
Sbjct: 63  PRVREIASKYSEAVFARVDVDRLMDVAGTYRAITLPAFVFVKRGEEIDRVVGAKPDELVK 122

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BLAST of CSPI03G39260 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 117.9 bits (294), Expect = 7.0e-27
Identity = 54/107 (50.47%), Postives = 72/107 (67.29%), Query Frame = 0


Query: 37  HSSARWQLHFNSLQETPKLMVVDFSATWCGPCRLMEPAFNAMASKYTDVEFAKIDVDELS 96
           H+   W        E+ KL+V+DF+A+WC PCR + P F  MA K+T+V F KIDVDEL 
Sbjct: 11  HTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVVFFKIDVDELQ 70

Query: 97  DVAQHFGVQAMPTFVFLKRGKVVDTVVGARKEELEKKIEKHRSVSGS 144
            VAQ F V+AMPTFVF+K G ++D VVGA K+E+ +K+ KH  +  S
Sbjct: 71  AVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKLMKHGGLVAS 117

The following BLAST results are available for this feature:

BLAST of CSPI03G39260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38879	3.5e-39	58.65	Thioredoxin H2 OS=Arabidopsis thaliana OX=3702 GN=TRX2 PE=1 SV=2	[more]
Q851R5	8.6e-30	50.36	Thioredoxin H2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0800700 PE=2 S...	[more]
Q6Z4I3	2.1e-28	50.00	Thioredoxin H2-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0190800 PE=2 S...	[more]
O64394	6.8e-27	49.15	Thioredoxin H-type OS=Triticum aestivum OX=4565 PE=2 SV=3	[more]
Q42403	3.4e-26	50.96	Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1	[more]

BLAST of CSPI03G39260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LHT3	7.0e-75	100.00	Thioredoxin h OS=Cucumis sativus OX=3659 GN=Csa_3G827380 PE=4 SV=1	[more]
A0A5D3DQ11	1.4e-70	94.44	Thioredoxin H2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00828...	[more]
A0A1S3B804	1.4e-70	94.44	thioredoxin H2 OS=Cucumis melo OX=3656 GN=LOC103487024 PE=4 SV=1	[more]
A0A6J1F1R9	1.3e-60	86.23	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111441603 PE=4 SV=1	[more]
A0A6J1EL53	1.7e-60	81.94	thioredoxin H2-like OS=Cucurbita moschata OX=3662 GN=LOC111435554 PE=4 SV=1	[more]

BLAST of CSPI03G39260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147463.1	1.4e-74	100.00	thioredoxin H2 [Cucumis sativus]	[more]
XP_008443435.2	2.8e-70	94.44	PREDICTED: thioredoxin H2 [Cucumis melo] >TYK25664.1 thioredoxin H2 [Cucumis mel...	[more]
XP_038903635.1	7.9e-65	88.03	thioredoxin H2 [Benincasa hispida]	[more]
XP_022934421.1	2.6e-60	86.23	thioredoxin H2-like [Cucurbita moschata] >XP_023527983.1 thioredoxin H2-like [Cu...	[more]
XP_022928736.1	3.4e-60	81.94	thioredoxin H2-like [Cucurbita moschata] >XP_023531186.1 thioredoxin H2-like iso...	[more]

BLAST of CSPI03G39260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G39950.1	2.5e-40	58.65	thioredoxin 2	[more]
AT1G19730.1	2.4e-27	47.41	Thioredoxin superfamily protein	[more]
AT5G42980.1	2.4e-27	50.96	thioredoxin 3	[more]
AT1G59730.1	5.3e-27	46.03	thioredoxin H-type 7	[more]
AT1G45145.1	7.0e-27	50.47	thioredoxin H-type 5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 56..64 score: 52.47 coord: 64..73 score: 58.06 coord: 103..114 score: 39.81
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 19..141 e-value: 4.4E-41 score: 141.7
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 9..140
None	No IPR available	PANTHER	PTHR10438:SF413	THIOREDOXIN H2	coord: 9..140
None	No IPR available	CDD	cd02947	TRX_family	coord: 45..126 e-value: 2.66541E-38 score: 123.437
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 47..135 e-value: 3.2E-28 score: 97.7
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 12..139 score: 14.82492
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 57..75
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 49..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G39260.1	CSPI03G39260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
molecular_function	GO:0016712	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen