CSPI03G37200 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G37200
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 32276160 .. 32279131 (+)
RNA-Seq ExpressionCSPI03G37200
SyntenyCSPI03G37200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGATATATATGCATCTCCTCATTCCCATTACGCATCGCCAAATTCCGGTGTTCGAAGTCGTAACCTGGTAGTGTCATTTCAAACCTTACAGCACCATAGATTATGGTATTTTCAACTGCTTCGTACTTTTCAATTCCCTGTCGTTCCATTATTCTTATGGGACAATTGATGATCTGCAAGGTTCTCAAAGTTTCTGCCGAGTTTTCAAGCCATTGGGGTAATCTTTCCACTCTTGGAAGCTCTTTGATCGTGAATCTTTGAAGCTTGAATTCCACTTCTTTTAAGTTTAGTGTAAGTTGCTTGCAACTCCAAATCATCAAATTTTGTAGTGATTTTAGATATCTCATCTCGTCTGGCAACAATTTCAAGGTAGTGCAATTATATATCATTAGGGTTTCGAGGCCTGCAAGGCAATCTGGGCGTTCAAATAGATTTTCTAGGTTATTGCACCCTCCAATGGCAAGAAACCGCAGAGAATTCATGGTTCCAACTCCGTTTTTGTCCAGACGAAGCTTGTTTGTTGTTACCCACAAGTATCTCAGGCTGATCAAATTCCTTATATCCTTGGGCAGGTCTTCAAGTGCGGAACAAGATCCAAGAATTAAGGTTTGCAAACTTTGTAGATTACATATTGAATTTGGTAGATGCTTGATTTTCGTATTGCCATGCAAGTCGAGGTATCTCAGGTACTTGAGTGTTCCTATGGAATTTGGAATTTCCTGTAGGTCTGCATTGCTTAAATACAACAATCTTAACCCTTTGTACTTCCAGATGCACTTTTCAGTTAGGGATGCATTAGGTAGCACCATATTTCTTTCTTGAAAGGCTATGGATCTTATTTCAGTGACTTCTTTGGGATGATTGTTGCCCCCCGAGCTCTCAGATTGTTCTTGTGTGATTTTGTGTGCAAGCTTTTGGATGAGAGGGTGCAATTTAATCCAGTAGCCAAGCCCATGTTCTTCAATTTCTTGAATGAAATATCTTGACCATAGCTCCATGAAGTACTTCTCACCTATATTTTCCATAGTTGAGTTCTTCTCTTCAGGTGAATGGAGGAGCCCATTTGCCATCCATAACTGAATCATATCATTTGAAGAAATTATGCGATCGTTTGGTAATTGAGAACAATGCAGAAAACAAGGCTTCAGTTGTGAGGGCATTTGATCATAGCAAACTCTGAGTACATGTAAAATACCGTTTTCCTTTTTCTCTTGGAGCGACAACTTTTCCTCGATGTTTTTCCACTCGGCTATGCTAGTTTCTGAAGATAGCAAGCTTCCTAGACACTTTATTGCCAAAGGAACTCCCATGCATTTCTCCAAAAGTTGATCAACTATTTTAGTGAGTTCTGGATTTTCTACTTCTTGTCTGTTTCTGAAAGCATATTCTTTGAATAAACGAGATGAACTTTGCTTTGACAGTTTCTCAAGTTTGAAAATTGTTTGATATTCCGTATCATCTTGCTTTATCGGTGGGATATCTGGATTGATCCCCAAGCCAATATTAGTATCTTCTGTAACTTGTGGAATTGGAACTTCTAGATTCTGAGCATCTTCTGTTAATGATAGGCTGTGTTCATAGATTTTGTTTGCTATAGCGTCTGCAGTTTCCTCAATTTGTGAACCTGGAACTGCTTGGTTCTGGGTATTTTTTGTTAACGACTGATTGTGTGCAGATACTCTGTCACCATTCGCCAGATTTTCCTTTGATCGTCTCTCAGTCTTGTAGCCACGGTCTTGTAAATAATTTGCAATTTCCTCAGTTTGTGTGGTCACTATGATCTTGCTGCCATGTTGTCCCATCTCCAATAATTCATATAACACTAAAGGGGAACGATCTTTCAAGTTGGTGATTGAAAGGTCTTGAAAGACGAGCAAAAAAGTTTCCACTTTCAGAAGTCGTTTAACCTTAGAAAGCAATTGTTCTGTCGTCAAGTCCTCGCAAATTTCTTTATTGTCTGCATGACTATAAACCTCCTTCACCAATCTATGTTTATTAAAGCCTTCCTCCACACAAACCCAGTATCTGGAAGTATACGTACCAACTACATCGTTATGATTGTACAAGAATCTGGCCACTGTGCTCTTACCTATACCTGCTTCCCCAACTATGTGGAATACATGAGTACATTCATTGAAAACATTCAAAATTCCATCATATATTTTGTCATATTTTCTGGAAGCATCTATTAAAGGGTAAAGCAATTGCCAACTTGGTTTCAGGTGTCTTATTGAAATTTCTGAAGCACTAGGGAAAGTGTGTGTTGTCTCCATACTTATGGAATCAATGTGCTTTACTTTGAGATGAAATTCATACATTCTGGTTGCAATGTTATTGAGTTCGTCGCATACTTGCTTCCTTTTACATTTCTGTTTCAATTTATTTGCAGAAATTTGATTAGAGCACGAGAAAGGGGCAAGTACCTGTTTTCCAATGTCCTTTTGTTTGAAGACTTCCCATTTGAATTCATCTATGGAGTCCTCAACTTGGTAAAAGACATTTTGAAGTTCCTTTAGCCAGTTCTGTAGACGTTGATTTTGTTCTTGCTTCTCTTCAGCATCCAAAAGAACCGCTTTAAGGCTCGACATCGCATACTCTATTCTTTTTTGGTAGGGTGGGGAATCTTTTAGCTTAGTCAAGATATTTTCAGCTTGGGTGTAGATGCAATGAGCCATATTATTTTTGGAAAATATCGCTCTCACAATTTTCTTGAGTTTGGAATGGTAAAAATGAGGGTAGTTGATATAAACACTTACTCCATGGTGATTCTTTGTGTTTTTTGTGAAGCAAGATAGCTTCAAAAACTCAACACTCTTGGGAAAGGTATCTTCTTCCTTCTACTCTCAAGAATAGAATAGGATTACTCTTAGGTTTTGTAATTATATAGACAATAATTTAAATAGGAGGAGTTTTAGAGAAGCTGAAACTAATTTATATATTTCGGTGCAATATTTTTCTTTGCTAACGGGAAC

mRNA sequence

GGATATATATGCATCTCCTCATTCCCATTACGCATCGCCAAATTCCGGTGTTCGAAGTCGTAACCTGGTAGTGTCATTTCAAACCTTACAGCACCATAGATTATGGTATTTTCAACTGCTTCGTACTTTTCAATTCCCTGTCGTTCCATTATTCTTATGGGACAATTGATGATCTGCAAGGTTCTCAAAGTTTCTGCCGAGTTTTCAAGCCATTGGGGTAATCTTTCCACTCTTGGAAGCTCTTTGATCGTGAATCTTTGAAGCTTGAATTCCACTTCTTTTAAGTTTAGTGTAAGTTGCTTGCAACTCCAAATCATCAAATTTTGTAGTGATTTTAGATATCTCATCTCGTCTGGCAACAATTTCAAGGTAGTGCAATTATATATCATTAGGGTTTCGAGGCCTGCAAGGCAATCTGGGCGTTCAAATAGATTTTCTAGGTTATTGCACCCTCCAATGGCAAGAAACCGCAGAGAATTCATGGTTCCAACTCCGTTTTTGTCCAGACGAAGCTTGTTTGTTGTTACCCACAAGTATCTCAGGCTGATCAAATTCCTTATATCCTTGGGCAGGTCTTCAAGTGCGGAACAAGATCCAAGAATTAAGGTTTGCAAACTTTGTAGATTACATATTGAATTTGGTAGATGCTTGATTTTCGTATTGCCATGCAAGTCGAGGTATCTCAGGTACTTGAGTGTTCCTATGGAATTTGGAATTTCCTGTAGGTCTGCATTGCTTAAATACAACAATCTTAACCCTTTGTACTTCCAGATGCACTTTTCAGTTAGGGATGCATTAGGTAGCACCATATTTCTTTCTTGAAAGGCTATGGATCTTATTTCAGTGACTTCTTTGGGATGATTGTTGCCCCCCGAGCTCTCAGATTGTTCTTGTGTGATTTTGTGTGCAAGCTTTTGGATGAGAGGGTGCAATTTAATCCAGTAGCCAAGCCCATGTTCTTCAATTTCTTGAATGAAATATCTTGACCATAGCTCCATGAAGTACTTCTCACCTATATTTTCCATAGTTGAGTTCTTCTCTTCAGGTGAATGGAGGAGCCCATTTGCCATCCATAACTGAATCATATCATTTGAAGAAATTATGCGATCGTTTGGTAATTGAGAACAATGCAGAAAACAAGGCTTCAGTTGTGAGGGCATTTGATCATAGCAAACTCTGAGTACATGTAAAATACCGTTTTCCTTTTTCTCTTGGAGCGACAACTTTTCCTCGATGTTTTTCCACTCGGCTATGCTAGTTTCTGAAGATAGCAAGCTTCCTAGACACTTTATTGCCAAAGGAACTCCCATGCATTTCTCCAAAAGTTGATCAACTATTTTAAAATTTGATTAGAGCACGAGAAAGGGGCAAGTACCTGTTTTCCAATGTCCTTTTGTTTGAAGACTTCCCATTTGAATTCATCTATGGAGTCCTCAACTTGGTAAAAGACATTTTGAAGTTCCTTTAGCCAGTTCTGTAGACGTTGATTTTGTTCTTGCTTCTCTTCAGCATCCAAAAGAACCGCTTTAAGGCTCGACATCGCATACTCTATTCTTTTTTGGTAGGGTGGGGAATCTTTTAGCTTAGTCAAGATATTTTCAGCTTGGGTGTAGATGCAATGAGCCATATTATTTTTGGAAAATATCGCTCTCACAATTTTCTTGAGTTTGGAATGGTAAAAATGAGGGTAGTTGATATAAACACTTACTCCATGGTGATTCTTTGTGTTTTTTGTGAAGCAAGATAGCTTCAAAAACTCAACACTCTTGGGAAAGGTATCTTCTTCCTTCTACTCTCAAGAATAGAATAGGATTACTCTTAGGTTTTGTAATTATATAGACAATAATTTAAATAGGAGGAGTTTTAGAGAAGCTGAAACTAATTTATATATTTCGGTGCAATATTTTTCTTTGCTAACGGGAAC

Coding sequence (CDS)

ATGGCAAGAAACCGCAGAGAATTCATGGTTCCAACTCCGTTTTTGTCCAGACGAAGCTTGTTTGTTGTTACCCACAAGTATCTCAGGCTGATCAAATTCCTTATATCCTTGGGCAGGTCTTCAAGTGCGGAACAAGATCCAAGAATTAAGGTTTGCAAACTTTGTAGATTACATATTGAATTTGGTAGATGCTTGATTTTCGTATTGCCATGCAAGTCGAGGTATCTCAGGTACTTGAGTGTTCCTATGGAATTTGGAATTTCCTGTAGGTCTGCATTGCTTAAATACAACAATCTTAACCCTTTGTACTTCCAGATGCACTTTTCAGTTAGGGATGCATTAGGTAGCACCATATTTCTTTCTTGA

Protein sequence

MARNRREFMVPTPFLSRRSLFVVTHKYLRLIKFLISLGRSSSAEQDPRIKVCKLCRLHIEFGRCLIFVLPCKSRYLRYLSVPMEFGISCRSALLKYNNLNPLYFQMHFSVRDALGSTIFLS*
Homology
[Close]
BLAST of CSPI03G37200 vs. ExPASy TrEMBL
Match: A0A0A0LH56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815405 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.4e-62
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0 

Query: 1   MARNRREFMVPTPFLSRRSLFVVTHKYLRLIKFLISLGRSSSAEQDPRIKVCKLCRLHIE 60
           MARNRREFMVPTPFLSRRSLFVVTHKYLRLIKFLISLGRSSSAEQDPRIKVCKLCRLHIE
Sbjct: 1   MARNRREFMVPTPFLSRRSLFVVTHKYLRLIKFLISLGRSSSAEQDPRIKVCKLCRLHIE 60

Query: 61  FGRCLIFVLPCKSRYLRYLSVPMEFGISCRSALLKYNNLNPLYFQMHFSVRDALGSTIFL 120
           FGRCLIFVLPCKSRYLRYLSVPMEFGISCRSALLKYNNLNPLYFQMHFSVRDALGSTIFL
Sbjct: 61  FGRCLIFVLPCKSRYLRYLSVPMEFGISCRSALLKYNNLNPLYFQMHFSVRDALGSTIFL 120

Query: 121 S 122
           S
Sbjct: 121 S 121

[Close]
BLAST of CSPI03G37200 vs. ExPASy TrEMBL
Match: A0A0A0LC31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814395 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 5.6e-25
Identity = 67/112 (59.82%), Postives = 73/112 (65.18%), Query Frame = 0 

Query: 9   MVPTPFLSRRSLFVVTHKYLRLIKFLISLGRSSSAEQDPRIKVCKLCRLHIEFGRCLIFV 68
           MVPTPFL RR LF VT +YLRL+  LISLG S SAEQD RIKVCK   L IEFG  LIF+
Sbjct: 1   MVPTPFLCRRRLFAVTQRYLRLVNCLISLGSSLSAEQDARIKVCKFFSLKIEFGSRLIFL 60

Query: 69  LPCKSRYLRYLSVPMEFGISCRSALLKYNNLNPLYFQMHFSVRDALGSTIFL 121
            PCKSRYL         GI CR AL K N+L  L   MH   R+ALG T+ L
Sbjct: 61  FPCKSRYLSCTRFSTALGIPCRFALPKCNSLKYLNLSMHAFARNALGGTLSL 112

The following BLAST results are available for this feature:
BLAST of CSPI03G37200 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G37200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LH564.4e-62100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G815405 PE=4 SV=1[more]
A0A0A0LC315.6e-2559.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814395 PE=4 SV=1[more]
BLAST of CSPI03G37200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI03G37200 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G37200.1CSPI03G37200.1mRNA