CSPI03G35350 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G35350
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUbiquitin-conjugating enzyme E2 variant 1D
LocationChr3: 30869193 .. 30873648 (+)
RNA-Seq ExpressionCSPI03G35350
SyntenyCSPI03G35350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTAATTTTCGTTGCCCCTTTTTCTAACCTATCGATTCCATAAGCCTTCAAGTTTTCCTCTTTATTCCCTTCGTTCTGTCCTTTATCTTCTTAGATTCTTCTTCTTCAAGTGTTCTATTTCCCTCACTCTTCGATCAGATCCTTGCTTGCTGATCGCAATTAACCTTTTTTTATTCATCTATGACGCTCGGTTCAGGAGGCTCGAGTGTTGTTGGTCAGTCTTTTTTATCTGTTCATCGAATTTTTCATTGATCTCATTCTCCCTTTCTTTTTATGCTGATTTGACTATTTCGTTCGTATTTTTTATTAATCGTTGATGGGTTTGTGTTAATTGTTCGATACTTCTATATTTATTTCACCCCTTTTGCTAATATTTGTTTGTTGCATTTTGTTAACTCCGATTTGCTGTGTGTTCTATGAGATTCGGTTTCCTCCTTGATTGTGGGTTAGATTAGTTTTGGTATGAAATTAATGGTCGGTCCTTCACGATTGAACTCGGCTCACTTTTTTGCGTATGATCTTTGTGGCTTATTTTGGATAGATATCTGCTACATCGTATTTTTTGGGGGTAGGGTTTGGTTATTGGCTATTGGTTACATGTGTTTTCGTGAAATAGCAACACTTACACGGTTCAGATTGATGAATCACAGTCTTCTTTGCTGTATACGTACTTGTGTCTCTCAGCTGTTCTCGTTACATATATTATTAGGCTAATCTAATGATTTGCTGTTTTTTTTTTAATCCAATCTGTAATCATGAATTCAAGGTGAACTTATTTTAATAATCACCTCAAACGTATAAACTTAGACCCGGAGGAAAATGGCCCACTTTGACTGATGCAGATTTTTTGTTTACTGCATGTCGCATGCATACTGTACTTTCAAATACTTTTGAGGCTTAGGATGAAGACTTGTTTTGGACGAGGCTCAGATGAACTCTGTTAACAAATTCGTAAAGAATGAGTAGAACTTGTCTGTGATAATAACGTTGACATTTAGAATATTTATTTATGTTGTGAATCTTTGTTAATGCAATTTTGTTGTTTTTATTGATGCATTTTGTATTTAGATTGAGGCTGATCCTTTATGCTAAATTGAGGTTTGTGCCTCACATCATTAGAAGAAAAACCCCGAGACTTCTTTTTACTTTTTTAACATTGTTTTGATACTTGAACAATAGGATTTGCAAATGAAATTATGAAAGAACATGCTCATATGCTCTGCTATATAATCGTTCTCTGAAACTTGTGCATTTTTCTAAAAATGAAATTAGTTAATTTACAGATGCACAATAGTCTGTAATTGTCATAACATGACTGGGATGTTAATTGTTTTTCTGTGAATTCTCATTTTAGGCTGATGTGTGGCTGGGAGATCATCCTGCCACCTTCTTCTTTCTTTTATTTCCTTTCAATCTACAGTCTTTCTCCCACTGAAACTGTCAGCAATTGAAATTTCACTCTCTTTCTTTGGGCTAGTTAACTATAACACTACAGGACAGATTTCTACTCTAGAACGCTATATATTGTATTGTTATGACATGTTTTGACTGTTGAACCTTCTCCACATGGTTCATCTTAGGATTAGTTATAAAGTGGCATAGAGATGGATGAACCATGGTTATTAAAATGGTTGATATACAATTTTCTGGTATTATAGATCATTGTTTCTTCTACATATTATTGTTATAGATATTAACCATTTATTCAATTAATTTTATGCATACCTCATTTTACTAGGGATGGTTCCTTTTGTGCCATTTGTAGGCCTCTTGCTTTCGTGTTAATCTTTTTTTTTTCTTTTGTCTTAGGGTTTATCTTGCACTGTGATAATGAAAACCTGACAAACAAGTGGTTCTTTCCATTTGAAGGATTAGGAACTGTCTGTGTTGGGTTGTTCTTCTGATGTGTTTTGTTTTTCCTAATTGGGTATACCTTAATCAAATTTTTGTCTAAATGCAATATTAAAAGTGCATTGATTTTATTTTGTATAAACATATGAAGTCTGTGCCTTAATTTCTTTTGATACAGTCCAGGCACAACTTTCCTTGTTTGTTGAAGAATTTGTGGCTTATTTTGTTGGGCTGTTTATTTTTGGCATATTCTGAAAAAATGCCAGGCGTATGGTTGGATGAGGGCTATCAGATGGGTATAACTTTGATGAAGGTCAATGTGTGTTCCAAGGCGGCAAGTAGTATTAACTCTTATGTGCTGGTCTCTGGATGAGTCATTGGAAATATGGAATGGTTGATGGGTATCAAAATGATTGGGAGATTAGTTCATAGGAGGTGGTTATAAAAATAAATGGAGCAGGAGTAGGATGGGGAGGGCTGATAATGAGAACCTGGAGTAGCTTGGGAATTAGGAGAGAAAGGGGAGAACTCTCAAATTTCATCCTTCTGTTTTCTATCTTTTCTTCATTTTAGTTCAAATATCAATTTGGTTAGTAGATGTGATTGCATATGAAGCTTTGATCCAGGAGATGTCTTTTAGACCCTAACGAACATAGGAGAAATGTCTGAAGGGGGATTATTGAATATTTTAATACAATTATCAATATATACATACTTCTCTCTGAACAAAATTAGTTGGCATCGAGTGATTTAAACCAGTCGGTTGGGTCCACTCTTTTTCTGTGTTGCTCTTTGAGAGGGCAAATCGATTAAATAATTTGTACATTGCAGATTGTGGAGTTGAATATGACGTTGATGTCTCACCAATGGCAGAACTTAAGCATCTTCTAAGTGTTTGCTTTCCATCACAGTTCCTAGGAACTTCAGGTTGCTGGAGGAACTTGAACGTGGAGAAAAGGGCATTGGCGATGGTACTGTTAGCTATGGAATGGATGATGGAGATGATATTTATATGCGTTCGTGGACTGGCACCATTATTGGTCCACACAATGTAATGGCTTTTGCCCTTCTTTTCAGGACTTTTTCTTAATGGTTTGGTCATGAAAACAATTCGAAAATTTAGAATTCGTTCTTACCAAAAAAAAAAAAAAGAAAAACTTATAATCCATTGACAATCATTGTTAACCACAATTACTACTCCTGCTCTTTCCCAATGTAATTGGCATAACACGTCTTTCTTCTTGAAGTTTGGAGTTCTCCTATTTTAAAAGCTTTGTATGAACAACCTGAGGGGGCAGATTCTATAAATGGTTGAACAATAAGTACTGTGAGGTGTCCTGAGCAGAAAATTGGCAGCCTACCTTATTTTACAATTTCCACTATATGGTGACACATACAAGGGAGTAAAATTTAATTCTTTTCTCCTTGCAGACGGTACATGAAGGTAGAATTTATCAGTTGAAGCTGTTCTGTGATAAAGATTACCCTGAGAAGCCACCAAGTGTTCGATTTCATTCAAGAGTCAACATGACATGCGTAAACCATGAAACTGGAGTGGTATCTCTGATTCCATTTACATACTTGTCAATATGAATCTCAGTACTTTTAATTAAACTAAAAATGGATATTTGAAAGAAAGAACAAGAGATAAGTGTAGTATAAATGTATAGTCGTATATCAAACTTATGTTTTTCTGAATTTTTGCTCCAATAGCAGCAAGTTCACCAACATGTTGTCACCTGCATTAACTAGAAATGATCAATATTAGCTGATAGTGACCTTTTCCGAGCTGATTATGTTTTGTAACATACATAATGATTAATTTCCAACAGGTTGAGTCAAAGAAATTTGGACTTCTTGCAAATTGGCAGCGAGAATACACAATGGAGGATATACTCACGCAGCTGAAAAAGGAAATGGCAGCTCCACATAACCGAAAGCTGGTCCAACCTCCTGAGGGCACCTACTTCTAGTTCCAAGATCATGTAAACATGATCATATGGTGTGCAATATGCAAATATAGTTTGCAATGCTGTGTAATTCTGTGGAAATTGAGCACATTCCTGGAAAGAACCAAAATCTTGATGATGATTAGCATTGCTTCATCGTTGATCAATAGTCTTTTTCTTGTCATTCTGTGTTTAAGGGATGGTCTTTTAATGATGGAAATGTGTCGAAATACAAATTTACCCAATAGTATTATCTAATTTGAGCGTTGGTTGTTTGCTGCAATACTCTGTCTGAACCCTTTTGTTGAAAGCTTTGCAGGAGAGTGGTAATTTCCCTCCACCATTCGGTTTTACTTTAATGCCCACAGCTTCATTGGAGTTAATGTACTGTTCATTCTCAAAATGACTTTGCAACTTGGAAGTAACCATTTTAGGTTAATCAAGGACGTGTCCTGAAGTTCTGGCGATGAAATATGTGGCTTTTTCATTCTTACCAGTCAGCAAGTTTGGAATGTAAAATCTAACGTCCACATTTCATAGCCTTTCAAGGAACATTTCTCAATCTCGGTATGGTTTTACATGAAAGATTACAATTGTTTCTTTGATTAATGAAACTGCCTTGTTTAGTTCCTACCATAATCTTACTACATACCTG

mRNA sequence

AATTAATTTTCGTTGCCCCTTTTTCTAACCTATCGATTCCATAAGCCTTCAAGTTTTCCTCTTTATTCCCTTCGTTCTGTCCTTTATCTTCTTAGATTCTTCTTCTTCAAGTGTTCTATTTCCCTCACTCTTCGATCAGATCCTTGCTTGCTGATCGCAATTAACCTTTTTTTATTCATCTATGACGCTCGGTTCAGGAGGCTCGAGTGTTGTTGTTCCTAGGAACTTCAGGTTGCTGGAGGAACTTGAACGTGGAGAAAAGGGCATTGGCGATGGTACTGTTAGCTATGGAATGGATGATGGAGATGATATTTATATGCGTTCGTGGACTGGCACCATTATTGGTCCACACAATACGGTACATGAAGGTAGAATTTATCAGTTGAAGCTGTTCTGTGATAAAGATTACCCTGAGAAGCCACCAAGTGTTCGATTTCATTCAAGAGTCAACATGACATGCGTAAACCATGAAACTGGAGTGGTTGAGTCAAAGAAATTTGGACTTCTTGCAAATTGGCAGCGAGAATACACAATGGAGGATATACTCACGCAGCTGAAAAAGGAAATGGCAGCTCCACATAACCGAAAGCTGGTCCAACCTCCTGAGGGCACCTACTTCTAGTTCCAAGATCATGTAAACATGATCATATGGTGTGCAATATGCAAATATAGTTTGCAATGCTGTGTAATTCTGTGGAAATTGAGCACATTCCTGGAAAGAACCAAAATCTTGATGATGATTAGCATTGCTTCATCGTTGATCAATAGTCTTTTTCTTGTCATTCTGTGTTTAAGGGATGGTCTTTTAATGATGGAAATGTGTCGAAATACAAATTTACCCAATAGTATTATCTAATTTGAGCGTTGGTTGTTTGCTGCAATACTCTGTCTGAACCCTTTTGTTGAAAGCTTTGCAGGAGAGTGGTAATTTCCCTCCACCATTCGGTTTTACTTTAATGCCCACAGCTTCATTGGAGTTAATGTACTGTTCATTCTCAAAATGACTTTGCAACTTGGAAGTAACCATTTTAGGTTAATCAAGGACGTGTCCTGAAGTTCTGGCGATGAAATATGTGGCTTTTTCATTCTTACCAGTCAGCAAGTTTGGAATGTAAAATCTAACGTCCACATTTCATAGCCTTTCAAGGAACATTTCTCAATCTCGGTATGGTTTTACATGAAAGATTACAATTGTTTCTTTGATTAATGAAACTGCCTTGTTTAGTTCCTACCATAATCTTACTACATACCTG

Coding sequence (CDS)

ATGACGCTCGGTTCAGGAGGCTCGAGTGTTGTTGTTCCTAGGAACTTCAGGTTGCTGGAGGAACTTGAACGTGGAGAAAAGGGCATTGGCGATGGTACTGTTAGCTATGGAATGGATGATGGAGATGATATTTATATGCGTTCGTGGACTGGCACCATTATTGGTCCACACAATACGGTACATGAAGGTAGAATTTATCAGTTGAAGCTGTTCTGTGATAAAGATTACCCTGAGAAGCCACCAAGTGTTCGATTTCATTCAAGAGTCAACATGACATGCGTAAACCATGAAACTGGAGTGGTTGAGTCAAAGAAATTTGGACTTCTTGCAAATTGGCAGCGAGAATACACAATGGAGGATATACTCACGCAGCTGAAAAAGGAAATGGCAGCTCCACATAACCGAAAGCTGGTCCAACCTCCTGAGGGCACCTACTTCTAG

Protein sequence

MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF*
Homology
[Close]
BLAST of CSPI03G35350 vs. ExPASy Swiss-Prot
Match: Q9SJ44 (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.2e-79
Identity = 137/146 (93.84%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGS-GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCVNH+TGVV+SKKFG+LANWQR+YTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAA HNRKLVQPPEGT+F
Sbjct: 121 ILTQLKKEMAASHNRKLVQPPEGTFF 145

[Close]
BLAST of CSPI03G35350 vs. ExPASy Swiss-Prot
Match: Q9SVD7 (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.2e-79
Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPP+VRFHSRVNM CVNHETGVV+ KKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           IL QLKKEM+  HNRKLVQPPEGT F
Sbjct: 121 ILVQLKKEMSTSHNRKLVQPPEGTCF 146

[Close]
BLAST of CSPI03G35350 vs. ExPASy Swiss-Prot
Match: Q93YP0 (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-60
Identity = 105/141 (74.47%), Postives = 119/141 (84.40%), Query Frame = 0 

Query: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62
           + S  + VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM+SWTGTI+GP NT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 63  GRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMEDIL 122
           G+I+QLKLFC K+YPE PP+VRF +R+NM CVN ETGVVE   F +L NW+REYTMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 123 TQLKKEMAAPHNRKLVQPPEG 144
            +LKKEM   HNRKL QPPEG
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEG 141

[Close]
BLAST of CSPI03G35350 vs. ExPASy Swiss-Prot
Match: Q9CAB6 (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 5.2e-59
Identity = 103/141 (73.05%), Postives = 118/141 (83.69%), Query Frame = 0 

Query: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62
           +GS    VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDI M+SWTGTI+GPHNT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 63  GRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMEDIL 122
           G+I+QLKLFC KDYPE PP+VRF SR+NM CVN E GVV+   F +L+NW+RE+TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 123 TQLKKEMAAPHNRKLVQPPEG 144
            QLKKEM +  NRKL QP EG
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEG 141

[Close]
BLAST of CSPI03G35350 vs. ExPASy Swiss-Prot
Match: Q54D06 (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=44689 GN=ube2v PE=3 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-44
Identity = 76/135 (56.30%), Postives = 103/135 (76.30%), Query Frame = 0 

Query: 12  VPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLF 71
           +PRNF LLEELE GEK  GDGT+SYG++  DDI + SW GTIIGP NT  + R Y LKL+
Sbjct: 4   IPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLY 63

Query: 72  CDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMEDILTQLKKEMAA 131
           CDKDYP KPP+VRF +++N+ CVN + GVV+ K   +L+NW  +  +++IL++L++EM++
Sbjct: 64  CDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSS 123

Query: 132 PHNRKLVQPPEGTYF 147
             N+KLVQPPEG  F
Sbjct: 124 SSNKKLVQPPEGANF 138

[Close]
BLAST of CSPI03G35350 vs. ExPASy TrEMBL
Match: A0A0A0LE42 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778350 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. ExPASy TrEMBL
Match: A0A1S3B6A6 (ubiquitin-conjugating enzyme E2 variant 1C OS=Cucumis melo OX=3656 GN=LOC103486656 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.7e-82
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. ExPASy TrEMBL
Match: A0A6P6AQA1 (ubiquitin-conjugating enzyme E2 variant 1C OS=Durio zibethinus OX=66656 GN=LOC111311670 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 3.5e-82
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPPSVRFHSR+NMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. ExPASy TrEMBL
Match: A0A6J1CTV6 (ubiquitin-conjugating enzyme E2 variant 1C OS=Momordica charantia OX=3673 GN=LOC111014288 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.0e-82
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYP+KPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPDKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. ExPASy TrEMBL
Match: A0A7J6HQG0 (UBC core domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_004917 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 7.8e-82
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPE+PPSVRFHSR+NMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPERPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. NCBI nr
Match: XP_004136503.1 (ubiquitin-conjugating enzyme E2 variant 1C [Cucumis sativus] >XP_008442892.1 PREDICTED: ubiquitin-conjugating enzyme E2 variant 1C [Cucumis melo] >KGN59179.1 hypothetical protein Csa_001903 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 5.5e-82
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. NCBI nr
Match: XP_021636663.1 (ubiquitin-conjugating enzyme E2 variant 1C isoform X2 [Hevea brasiliensis] >XP_022766996.1 ubiquitin-conjugating enzyme E2 variant 1C [Durio zibethinus])

HSP 1 Score: 313.9 bits (803), Expect = 7.2e-82
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPPSVRFHSR+NMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. NCBI nr
Match: XP_022144653.1 (ubiquitin-conjugating enzyme E2 variant 1C [Momordica charantia] >XP_038904037.1 ubiquitin-conjugating enzyme E2 variant 1C [Benincasa hispida])

HSP 1 Score: 313.2 bits (801), Expect = 1.2e-81
Identity = 145/146 (99.32%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYP+KPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPDKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. NCBI nr
Match: XP_030485037.1 (ubiquitin-conjugating enzyme E2 variant 1C [Cannabis sativa] >KAF4396949.1 hypothetical protein F8388_004917 [Cannabis sativa] >KAF4402830.1 hypothetical protein G4B88_010282 [Cannabis sativa])

HSP 1 Score: 312.8 bits (800), Expect = 1.6e-81
Identity = 144/146 (98.63%), Postives = 146/146 (100.00%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPE+PPSVRFHSR+NMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPERPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. NCBI nr
Match: XP_030543544.1 (ubiquitin-conjugating enzyme E2 variant 1C [Rhodamnia argentea] >XP_030543555.1 ubiquitin-conjugating enzyme E2 variant 1C [Rhodamnia argentea] >XP_030543563.1 ubiquitin-conjugating enzyme E2 variant 1C [Rhodamnia argentea])

HSP 1 Score: 312.4 bits (799), Expect = 2.1e-81
Identity = 144/146 (98.63%), Postives = 145/146 (99.32%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGS VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSGVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPPSVRFHSR+NMTCVNHETGVVESKKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVESKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAAPHNRKLVQPPEGTYF
Sbjct: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 146

[Close]
BLAST of CSPI03G35350 vs. TAIR 10
Match: AT2G36060.1 (MMS ZWEI homologue 3 )

HSP 1 Score: 297.0 bits (759), Expect = 8.5e-81
Identity = 137/146 (93.84%), Postives = 144/146 (98.63%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGS-GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCVNH+TGVV+SKKFG+LANWQR+YTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAA HNRKLVQPPEGT+F
Sbjct: 121 ILTQLKKEMAASHNRKLVQPPEGTFF 145

[Close]
BLAST of CSPI03G35350 vs. TAIR 10
Match: AT3G52560.1 (ubiquitin E2 variant 1D-4 )

HSP 1 Score: 297.0 bits (759), Expect = 8.5e-81
Identity = 137/146 (93.84%), Postives = 140/146 (95.89%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPP+VRFHSRVNM CVNHETGVV+ KKFGLLANWQREYTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           IL QLKKEM+  HNRKLVQPPEGT F
Sbjct: 121 ILVQLKKEMSTSHNRKLVQPPEGTCF 146

[Close]
BLAST of CSPI03G35350 vs. TAIR 10
Match: AT2G36060.2 (MMS ZWEI homologue 3 )

HSP 1 Score: 292.4 bits (747), Expect = 2.1e-79
Identity = 137/147 (93.20%), Postives = 144/147 (97.96%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN-T 60
           MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN T
Sbjct: 1   MTLGS-GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVT 60

Query: 61  VHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTME 120
           VHEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCVNH+TGVV+SKKFG+LANWQR+YTME
Sbjct: 61  VHEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTME 120

Query: 121 DILTQLKKEMAAPHNRKLVQPPEGTYF 147
           DILTQLKKEMAA HNRKLVQPPEGT+F
Sbjct: 121 DILTQLKKEMAASHNRKLVQPPEGTFF 146

[Close]
BLAST of CSPI03G35350 vs. TAIR 10
Match: AT3G52560.2 (ubiquitin E2 variant 1D-4 )

HSP 1 Score: 292.4 bits (747), Expect = 2.1e-79
Identity = 137/147 (93.20%), Postives = 140/147 (95.24%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN-T 60
           MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHN T
Sbjct: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVT 60

Query: 61  VHEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTME 120
           VHEGRIYQLKLFCDKDYPEKPP+VRFHSRVNM CVNHETGVV+ KKFGLLANWQREYTME
Sbjct: 61  VHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTME 120

Query: 121 DILTQLKKEMAAPHNRKLVQPPEGTYF 147
           DIL QLKKEM+  HNRKLVQPPEGT F
Sbjct: 121 DILVQLKKEMSTSHNRKLVQPPEGTCF 147

[Close]
BLAST of CSPI03G35350 vs. TAIR 10
Match: AT2G36060.3 (MMS ZWEI homologue 3 )

HSP 1 Score: 290.4 bits (742), Expect = 8.0e-79
Identity = 136/146 (93.15%), Postives = 143/146 (97.95%), Query Frame = 0 

Query: 1   MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60
           MTLGS GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV
Sbjct: 1   MTLGS-GSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTV 60

Query: 61  HEGRIYQLKLFCDKDYPEKPPSVRFHSRVNMTCVNHETGVVESKKFGLLANWQREYTMED 120
           HEGRIYQLKLFCDKDYPEKPP+VRFHSR+NMTCVNH+TG V+SKKFG+LANWQR+YTMED
Sbjct: 61  HEGRIYQLKLFCDKDYPEKPPTVRFHSRINMTCVNHDTG-VDSKKFGVLANWQRQYTMED 120

Query: 121 ILTQLKKEMAAPHNRKLVQPPEGTYF 147
           ILTQLKKEMAA HNRKLVQPPEGT+F
Sbjct: 121 ILTQLKKEMAASHNRKLVQPPEGTFF 144

The following BLAST results are available for this feature:
BLAST of CSPI03G35350 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SJ441.2e-7993.84Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q9SVD71.2e-7993.84Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q93YP02.1e-6074.47Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q9CAB65.2e-5973.05Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UE... [more]
Q54D061.3e-4456.30Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=... [more]
BLAST of CSPI03G35350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LE422.7e-82100.00UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G778350 PE... [more]
A0A1S3B6A62.7e-82100.00ubiquitin-conjugating enzyme E2 variant 1C OS=Cucumis melo OX=3656 GN=LOC1034866... [more]
A0A6P6AQA13.5e-8299.32ubiquitin-conjugating enzyme E2 variant 1C OS=Durio zibethinus OX=66656 GN=LOC11... [more]
A0A6J1CTV66.0e-8299.32ubiquitin-conjugating enzyme E2 variant 1C OS=Momordica charantia OX=3673 GN=LOC... [more]
A0A7J6HQG07.8e-8298.63UBC core domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_004917 PE... [more]
BLAST of CSPI03G35350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004136503.15.5e-82100.00ubiquitin-conjugating enzyme E2 variant 1C [Cucumis sativus] >XP_008442892.1 PRE... [more]
XP_021636663.17.2e-8299.32ubiquitin-conjugating enzyme E2 variant 1C isoform X2 [Hevea brasiliensis] >XP_0... [more]
XP_022144653.11.2e-8199.32ubiquitin-conjugating enzyme E2 variant 1C [Momordica charantia] >XP_038904037.1... [more]
XP_030485037.11.6e-8198.63ubiquitin-conjugating enzyme E2 variant 1C [Cannabis sativa] >KAF4396949.1 hypot... [more]
XP_030543544.12.1e-8198.63ubiquitin-conjugating enzyme E2 variant 1C [Rhodamnia argentea] >XP_030543555.1 ... [more]
BLAST of CSPI03G35350 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G36060.18.5e-8193.84MMS ZWEI homologue 3 [more]
AT3G52560.18.5e-8193.84ubiquitin E2 variant 1D-4 [more]
AT2G36060.22.1e-7993.20MMS ZWEI homologue 3 [more]
AT3G52560.22.1e-7993.20ubiquitin E2 variant 1D-4 [more]
AT2G36060.38.0e-7993.15MMS ZWEI homologue 3 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 4..110
e-value: 6.4E-31
score: 108.8
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 11..103
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 43..103
e-value: 3.2E-11
score: 43.0
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 13..111
score: 24.852596
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 11..107
NoneNo IPR availablePANTHERPTHR24068:SF380BNAA05G13430D PROTEINcoord: 11..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G35350.1CSPI03G35350.1mRNA
CSPI03G35350.2CSPI03G35350.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006402 mRNA catabolic process
biological_process GO:0006301 postreplication repair
biological_process GO:0070534 protein K63-linked ubiquitination
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component GO:0030014 CCR4-NOT complex
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004535 poly(A)-specific ribonuclease activity