CSPI03G35190 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G35190
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 30773008 .. 30773761 (+)
RNA-Seq ExpressionCSPI03G35190
SyntenyCSPI03G35190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAATATTTTAATTAACGTTCATCTTTCACAATAAATAGGGAAGCTCTCCAGAGGAAAGAATATAGAAGCAAAAAAGAAAACTTGAGAAAAGAGTTAAAAGAGAAAACACGAGAGCCAAAGATGGAGGGGAAGAAGCTAGCTTTGGTGGTGCTGATGGTGATGACGATATTTACGTGCTCTTTAGCTCAGGATGCCTTAAACGACGACAAACGTCAGTTCGAGAAAAATGAAAACAAAGAGTACATTCAGCTCTTCTCCGATGGCAGTAACGACAAAGGAGTAAGGTACAAAGACGATTACTCAAGAAAGATGATGAAAGAGGCACCAACACCGACACCAACACCGCCGCCACCACCCATCTGTTTTGGAAATTTCTGTGGTGGTGGACTACTCGATTGCGATGAACCCTGCTTTTGCAACATTCCAATGGGTGCAACAAGGGGAAATTGTGTTTTGTATTAATTAATTCACTTCCATGTTACATTATGCATGCATGTAAGCTTAACTATTTGCTTTCATATTGATGAATGTGAACTGCAAATAATTATAAATAAAAGTGGAAAAGGTCAGTTAAGTACTGATCTTTTGCTAGTTATTATTATTATATATATATATATATATGAATTGTTTCATCTTTGTAAAGTTTTCTTTTCAAAACACCATTCACCTTTCGTACGTGAACCTTTTAAGGGTGTGTTCCAGGGAAAAGGTTATGGAAAAAGGGTTATATCCTTTCCTTGTTTGGTTCCCCAA

mRNA sequence

ATAATATTTTAATTAACGTTCATCTTTCACAATAAATAGGGAAGCTCTCCAGAGGAAAGAATATAGAAGCAAAAAAGAAAACTTGAGAAAAGAGTTAAAAGAGAAAACACGAGAGCCAAAGATGGAGGGGAAGAAGCTAGCTTTGGTGGTGCTGATGGTGATGACGATATTTACGTGCTCTTTAGCTCAGGATGCCTTAAACGACGACAAACGTCAGTTCGAGAAAAATGAAAACAAAGAGTACATTCAGCTCTTCTCCGATGGCAGTAACGACAAAGGAGTAAGGTACAAAGACGATTACTCAAGAAAGATGATGAAAGAGGCACCAACACCGACACCAACACCGCCGCCACCACCCATCTGTTTTGGAAATTTCTGTGGTGGTGGACTACTCGATTGCGATGAACCCTGCTTTTGCAACATTCCAATGGGTGCAACAAGGGGAAATTGTGTTTTGTATTAATTAATTCACTTCCATGTTACATTATGCATGCATGTAAGCTTAACTATTTGCTTTCATATTGATGAATGTGAACTGCAAATAATTATAAATAAAAGTGGAAAAGGTCAGTTAAGTACTGATCTTTTGCTAGTTATTATTATTATATATATATATATATATGAATTGTTTCATCTTTGTAAAGTTTTCTTTTCAAAACACCATTCACCTTTCGTACGTGAACCTTTTAAGGGTGTGTTCCAGGGAAAAGGTTATGGAAAAAGGGTTATATCCTTTCCTTGTTTGGTTCCCCAA

Coding sequence (CDS)

ATGGAGGGGAAGAAGCTAGCTTTGGTGGTGCTGATGGTGATGACGATATTTACGTGCTCTTTAGCTCAGGATGCCTTAAACGACGACAAACGTCAGTTCGAGAAAAATGAAAACAAAGAGTACATTCAGCTCTTCTCCGATGGCAGTAACGACAAAGGAGTAAGGTACAAAGACGATTACTCAAGAAAGATGATGAAAGAGGCACCAACACCGACACCAACACCGCCGCCACCACCCATCTGTTTTGGAAATTTCTGTGGTGGTGGACTACTCGATTGCGATGAACCCTGCTTTTGCAACATTCCAATGGGTGCAACAAGGGGAAATTGTGTTTTGTATTAA

Protein sequence

MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY*
Homology
[Close]
BLAST of CSPI03G35190 vs. ExPASy TrEMBL
Match: A0A0A0LGQ3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 7.7e-61
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60
           MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY
Sbjct: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60

Query: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 114
           SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY
Sbjct: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113

[Close]
BLAST of CSPI03G35190 vs. ExPASy TrEMBL
Match: A0A5D3E3L2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold9509G00010 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.7e-45
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKD 60
           MEGKKLALVV+M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+
Sbjct: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKN 60

Query: 61  DYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 114
           DYSRKM+KEAPTPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  DYSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114

[Close]
BLAST of CSPI03G35190 vs. ExPASy TrEMBL
Match: A0A5A7TKL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G001870 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.4e-40
Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 12  MVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKDDYSRKMMKEAP 71
           M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+DYSRKM+KEAP
Sbjct: 1   MTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAP 60

Query: 72  TPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 114
           TPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  TPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 103

[Close]
BLAST of CSPI03G35190 vs. NCBI nr
Match: KGN59161.1 (hypothetical protein Csa_002402 [Cucumis sativus])

HSP 1 Score: 242.7 bits (618), Expect = 1.6e-60
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60
           MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY
Sbjct: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60

Query: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 114
           SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY
Sbjct: 61  SRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 113

[Close]
BLAST of CSPI03G35190 vs. NCBI nr
Match: TYK30388.1 (hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 191.0 bits (484), Expect = 5.5e-45
Identity = 91/115 (79.13%), Postives = 103/115 (89.57%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKD 60
           MEGKKLALVV+M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+
Sbjct: 1   MEGKKLALVVVMTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKN 60

Query: 61  DYSRKMMKEAPTPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 114
           DYSRKM+KEAPTPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  DYSRKMIKEAPTPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 114

[Close]
BLAST of CSPI03G35190 vs. NCBI nr
Match: KAA0043852.1 (hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa])

HSP 1 Score: 173.7 bits (439), Expect = 9.0e-40
Identity = 81/104 (77.88%), Postives = 92/104 (88.46%), Query Frame = 0 

Query: 12  MVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSND--KGVRYKDDYSRKMMKEAP 71
           M   IFTC LA  ALN++ RQFE+NENKEYIQLFSD SN+  +GV+YK+DYSRKM+KEAP
Sbjct: 1   MTTMIFTCCLAHVALNEE-RQFEENENKEYIQLFSDDSNNVGEGVKYKNDYSRKMIKEAP 60

Query: 72  TPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCVLY 114
           TPTPTPPPP IC+GNFCGGGLL CDEPCFC+IP+GATRGNCVLY
Sbjct: 61  TPTPTPPPPSICYGNFCGGGLLPCDEPCFCSIPLGATRGNCVLY 103

[Close]
BLAST of CSPI03G35190 vs. NCBI nr
Match: KAG6580718.1 (hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 106.3 bits (264), Expect = 1.8e-19
Identity = 58/113 (51.33%), Postives = 69/113 (61.06%), Query Frame = 0 

Query: 1   MEGKKLALVVLMVMTIFTCSLAQDALNDDKRQFEKNENKEYIQLFSDGSNDKGVRYKDDY 60
           MEGKK+ALVVL+V   FT +LA++                  QL +DGSND+    + D 
Sbjct: 1   MEGKKVALVVLLVTMAFTSALARN------------------QLIADGSNDRAGSDEYDE 60

Query: 61  SRKMMKEAP--TPTPTPPPPPICFGNFCGGGLLDCDEPCFCNIPMGATRGNCV 112
             KM + AP   P P P P P CFGNFCGGGLL CDEPCFC IPMG+ RG+CV
Sbjct: 61  LIKMAEGAPEAAPEPAPSPRPSCFGNFCGGGLLPCDEPCFCFIPMGSQRGSCV 95

The following BLAST results are available for this feature:
BLAST of CSPI03G35190 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G35190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGQ37.7e-61100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778180 PE=4 SV=1[more]
A0A5D3E3L22.7e-4579.13Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TKL84.4e-4077.88Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of CSPI03G35190 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59161.11.6e-60100.00hypothetical protein Csa_002402 [Cucumis sativus][more]
TYK30388.15.5e-4579.13hypothetical protein E5676_scaffold9509G00010 [Cucumis melo var. makuwa][more]
KAA0043852.19.0e-4077.88hypothetical protein E6C27_scaffold236G001870 [Cucumis melo var. makuwa][more]
KAG6580718.11.8e-1951.33hypothetical protein SDJN03_20720, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CSPI03G35190 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G35190.1CSPI03G35190.1mRNA