CSPI03G35100 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G35100
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 30733201 .. 30733446 (+)
RNA-Seq ExpressionCSPI03G35100
SyntenyCSPI03G35100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGAACCTCTTTGAATGTCAATATTCAAAAGCGATCAGCCATCTTGAAGCTGCTTTCCAGCGAAAATCAGAGCCTTCGGATTCTGATGGAATTCCTGTTTATGGCTAACAATTCATTTCCAATTTACAACCCCAAAAACGAATATGAAACGAAACCGTCTTTGTAATGGATTGAATTTTGGCTTAGACATTGTCGATGGCGTTACAGCTCTCGACTTCGAGATTGAAATCTTCCCCATTCTAG

mRNA sequence

ATGTCGAACCTCTTTGAATGTCAATATTCAAAAGCGATCAGCCATCTTGAAGCTGCTTTCCAGCGAAAATCAGAGCCTTCGGATTCTGATGGAATTCCTACATTGTCGATGGCGTTACAGCTCTCGACTTCGAGATTGAAATCTTCCCCATTCTAG

Coding sequence (CDS)

ATGTCGAACCTCTTTGAATGTCAATATTCAAAAGCGATCAGCCATCTTGAAGCTGCTTTCCAGCGAAAATCAGAGCCTTCGGATTCTGATGGAATTCCTACATTGTCGATGGCGTTACAGCTCTCGACTTCGAGATTGAAATCTTCCCCATTCTAG

Protein sequence

MSNLFECQYSKAISHLEAAFQRKSEPSDSDGIPTLSMALQLSTSRLKSSPF*
Homology
[Close]
BLAST of CSPI03G35100 vs. ExPASy TrEMBL
Match: A0A0A0LEM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777600 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.6e-19
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 1  MSNLFECQYSKAISHLEAAFQRKSEPSDSDGIPTLSMALQLSTSRLKSSPF 52
          MSNLFECQYSKAISHLEAAFQRKSEPSDSDGIPTLSMALQLSTSRLKSSPF
Sbjct: 1  MSNLFECQYSKAISHLEAAFQRKSEPSDSDGIPTLSMALQLSTSRLKSSPF 51

[Close]
BLAST of CSPI03G35100 vs. NCBI nr
Match: KGN59152.1 (hypothetical protein Csa_001573 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 2.0e-18
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 1  MSNLFECQYSKAISHLEAAFQRKSEPSDSDGIPTLSMALQLSTSRLKSSPF 52
          MSNLFECQYSKAISHLEAAFQRKSEPSDSDGIPTLSMALQLSTSRLKSSPF
Sbjct: 1  MSNLFECQYSKAISHLEAAFQRKSEPSDSDGIPTLSMALQLSTSRLKSSPF 51

The following BLAST results are available for this feature:
BLAST of CSPI03G35100 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G35100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEM39.6e-19100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G777600 PE=4 SV=1[more]
BLAST of CSPI03G35100 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN59152.12.0e-18100.00hypothetical protein Csa_001573 [Cucumis sativus][more]
BLAST of CSPI03G35100 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G35100.1CSPI03G35100.1mRNA