CSPI03G34550 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G34550
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 30340865 .. 30341308 (-)
RNA-Seq ExpressionCSPI03G34550
SyntenyCSPI03G34550
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACATCCTCAGAAACCCATTACCTAACAAGCAAAAACCCATACCAAAAGTGTTAAAAGAAAGCATGAACATGGGGCAAACTAACATTGAAATGCGTGTAAATAACCATATAAGAAATCAGGAATCAGGACAAAATCAATATGACTATGTGATGATTATCGGCATCAACGAAGTGCAAAACAAGCACAATCAATTTCATTCACGACAACAATTTAGTAAACAGGAAAGTAGGGAGGAGATAGCATTGATTTGGAGAAACCATACAAATTACTTAGCAACAGATGGAAATGAAATGGGTAAAAGGTTTGAGAAAGATACCAGTTTGCTTTAGAACCTACGAACACCAAGTGTTAATTTCCCTCTACTAGATAATAGTGTGAAGCGTATGGTTCGGCTCCAATTTTCATAAAACCAGAGTTGAACTGGTTAATTGATGAAAGAAAAC

mRNA sequence

TACATCCTCAGAAACCCATTACCTAACAAGCAAAAACCCATACCAAAAGTGTTAAAAGAAAGCATGAACATGGGGCAAACTAACATTGAAATGCGTGTAAATAACCATATAAGAAATCAGGAATCAGGACAAAATCAATATGACTATGTGATGATTATCGGCATCAACGAAGTGCAAAACAAGCACAATCAATTTCATTCACGACAACAATTTAGTAAACAGGAAAGTAGGGAGGAGATAGCATTGATTTGGAGAAACCATACAAATTACTTAGCAACAGATGGAAATGAAATGGGTAAAAGGTTTGAGAAAGATACCAGTTTGCTTTAGAACCTACGAACACCAAGTGTTAATTTCCCTCTACTAGATAATAGTGTGAAGCGTATGGTTCGGCTCCAATTTTCATAAAACCAGAGTTGAACTGGTTAATTGATGAAAGAAAAC

Coding sequence (CDS)

ATGAACATGGGGCAAACTAACATTGAAATGCGTGTAAATAACCATATAAGAAATCAGGAATCAGGACAAAATCAATATGACTATGTGATGATTATCGGCATCAACGAAGTGCAAAACAAGCACAATCAATTTCATTCACGACAACAATTTAGTAAACAGGAAAGTAGGGAGGAGATAGCATTGATTTGGAGAAACCATACAAATTACTTAGCAACAGATGGAAATGAAATGGGTAAAAGGTTTGAGAAAGATACCAGTTTGCTTTAG

Protein sequence

MNMGQTNIEMRVNNHIRNQESGQNQYDYVMIIGINEVQNKHNQFHSRQQFSKQESREEIALIWRNHTNYLATDGNEMGKRFEKDTSLL*
Homology
[Close]
BLAST of CSPI03G34550 vs. ExPASy TrEMBL
Match: A0A0A0LBC0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769100 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 9.9e-40
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0 

Query: 3  MGQTNIEMRVNNHIRNQESGQNQYDYVMIIGINEVQNKHNQFHSRQQFSKQESREEIALI 62
          MGQTN+EMRVNNHIRNQESGQNQYDYVMIIGINEVQNKHNQFHSRQQFSKQESREEIALI
Sbjct: 1  MGQTNVEMRVNNHIRNQESGQNQYDYVMIIGINEVQNKHNQFHSRQQFSKQESREEIALI 60

Query: 63 WRNHTNYLATDGNEMGKRFEKDTSL 88
          WRNHTNYLATDGNEMGKRFEKDT L
Sbjct: 61 WRNHTNYLATDGNEMGKRFEKDTKL 85

[Close]
BLAST of CSPI03G34550 vs. NCBI nr
Match: KAE8645987.1 (hypothetical protein Csa_015478 [Cucumis sativus])

HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39
Identity = 83/85 (97.65%), Postives = 84/85 (98.82%), Query Frame = 0 

Query: 3  MGQTNIEMRVNNHIRNQESGQNQYDYVMIIGINEVQNKHNQFHSRQQFSKQESREEIALI 62
          MGQTN+EMRVNNHIRNQESGQNQYDYVMIIGINEVQNKHNQFHSRQQFSKQESREEIALI
Sbjct: 1  MGQTNVEMRVNNHIRNQESGQNQYDYVMIIGINEVQNKHNQFHSRQQFSKQESREEIALI 60

Query: 63 WRNHTNYLATDGNEMGKRFEKDTSL 88
          WRNHTNYLATDGNEMGKRFEKDT L
Sbjct: 61 WRNHTNYLATDGNEMGKRFEKDTKL 85

The following BLAST results are available for this feature:
BLAST of CSPI03G34550 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G34550 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBC09.9e-4097.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G769100 PE=4 SV=1[more]
BLAST of CSPI03G34550 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8645987.12.1e-3997.65hypothetical protein Csa_015478 [Cucumis sativus][more]
BLAST of CSPI03G34550 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G34550.1CSPI03G34550.1mRNA