CSPI03G34300 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGGATGAAATGTATTAAAAAAAGAATTTCAAACTTTTTTTAGGGAAGAAAATGGTATTTAATAAAAGGAGGAGGCTGGGGGGTGGGCACTTTCAAAAGGCATTTCTATTCTATTCTTAGTTTTTATAAGCACTTAGCAATACCCATAACCCACAAGCTGAAAAGAAAAATTGAAAATACAGCACAAACCCCATCATTCCAAAAGCAAAAGCGAAAGAAGAGAGAGAAAAAGCAACAAACCCAGAAAACACAAAGGAGGAGGAAGAGGAAGAAGAAGAAGAAGAATCAGAAGAACAGAGGAATTTTTTTAAGGAAATTCAAAGAAATACGAAACAAGGGTTTTGTGGGTTAACAGGATGCAGCCTGAACAAGCTCAACAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTTTCCACTTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTAAGAGAGAAGGTTCAAGCTCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTTGCTTGCATCCGTGAGGTAAGGAGGGATTTCTTTTCTTTTTTTTTCACAGCATTTTAAGGGTTTTTACCTTTAAATCTTTCATGGGTTTTTCTTAGATTTTGGTTTTTGAGACACGCTTTTAACTTTTCTGCTGTGTTTTACATGAATTTGGTGGGTTTGGGGGAAAAGTTGGGTATAAAATTGTGGAAGATCTCTTCAATATGACTGTAATTTTGAGGGAAATATTTGCTAAAAAGGTCTGAGGACAAGGGGTTCTTAACCCCTTTTGCATGATTTAGTTCTATTATCTATGGGATTTGGGATTAAATTAATGTTTTATCAAGGAATTAGGAGCAGCTTTATGTCAGATTTGTAAGTTTCTTTGTATTATTTTGACTTGCATTCTTAACATATAACCTTTTCTAGACTAATGTCCCATTTTGTATGTGTATTTTCGTTACTTTAGTTACCTGAAAATGAGGCTCTGATCTGAATTTTAGCCTTTTATTTTTGTGTTGTCTTCAAACCTTTTCATGTCAAGGAACAAGAGCAGTTGAAAGAGCTTAAAAAACACCTCATTCCCTTGAGAGAGAAGAGAGATTCTCATTTGCATAGTCTATTTACTCATGAATTCAAGGAGTAGATGATTATGGTGCTAAAACATTATCTACAATGCTTTGATGTTCGTCTGTGGTTGGTTAGTTCAAAGAATCTTTTAGTTCTATGATTAGATTAGGTGGACAAGCAATTAGTAGAAGAAGAGTTTATATGGCAATGTCCAACGATTTATATCAGAAGTAGAAATATGAAGAAATAGTTACAGCAGATACTTTATTCTATGGATAAAGGATGTATTTGATAGAAGAATCACCGTAAAGATCAACTAGTCAGATTTTTGGTTGTTTTCGAATTGGATTCTGTTTGTTGTTCTTGTTGTTTCGGATAATCAGATGAATTTTACATACACCAGGAACTTGAGGCACTGGCAGATCCAATGAGGAAGGAAGTGGCACAAGTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGTGAGATTTGGGGGAAAGAATAGCTGTGTGGACAAGCATTGCCTAGCATATAAGATGATGTTGCATTCTGTGAATCTCAATTATTGTACCTTACAATATCAAATAGGACCACTGAGCTGGTTTTCGTATTGTCTGTAATAGGAAAAAGAGTACAAGGAAGCCCTTGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGGTAAGTTCCCTTGAGTTCCTTTCGTTCTCCATCATCTGCACGTCAAACGTCATAAATAACCGGGTGATAGGAACCAAATTTTGCACAACTGGAGGCTATTCAATAAATTTTGAACCTTGTTGATTTGGACGCATCAGTTCAGCAATTGAAAAATCTTATCGATTTGGCCTCCATTAGTTGTAAAACTCTTGTTCTGGTCGTGTATTATCATTCGGGTTTCAATTGATGGATTGACTTGTTTTGTTTTTTTGGTGGGCAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAACTGAATTGATTGATTGATTGATTGGAGTGACGGATGACAAAGTGATAACCCTCTGTTTATTAGGCTTTTGGTGTGTGTGATGTATTTAATATAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTTGTGTTTTGGGTGTATTTTTATAATTTGTCCTTGTTTGTTTATTTTTCCTTTAGAGAAGTTACTCAAAAACATTTTAACTGATTTTAGGAAGGGAATTGCCCTATAAACAGGTTTGTAACTCATCTCCCCC AAAAGGATGAAATGTATTAAAAAAAGAATTTCAAACTTTTTTTAGGGAAGAAAATGGTATTTAATAAAAGGAGGAGGCTGGGGGGTGGGCACTTTCAAAAGGCATTTCTATTCTATTCTTAGTTTTTATAAGCACTTAGCAATACCCATAACCCACAAGCTGAAAAGAAAAATTGAAAATACAGCACAAACCCCATCATTCCAAAAGCAAAAGCGAAAGAAGAGAGAGAAAAAGCAACAAACCCAGAAAACACAAAGGAGGAGGAAGAGGAAGAAGAAGAAGAAGAATCAGAAGAACAGAGGAATTTTTTTAAGGAAATTCAAAGAAATACGAAACAAGGGTTTTGTGGGTTAACAGGATGCAGCCTGAACAAGCTCAACAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTTTCCACTTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTAAGAGAGAAGGTTCAAGCTCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTTGCTTGCATCCGTGAGGAACTTGAGGCACTGGCAGATCCAATGAGGAAGGAAGTGGCACAAGTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTTGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAACTGAATTGATTGATTGATTGATTGGAGTGACGGATGACAAAGTGATAACCCTCTGTTTATTAGGCTTTTGGTGTGTGTGATGTATTTAATATAAAGAAGAAAAAGGACTTGTTTGTGTATTTATTGAAATCTGGGTGTTCTCTTGTGTTTTGGGTGTATTTTTATAATTTGTCCTTGTTTGTTTATTTTTCCTTTAGAGAAGTTACTCAAAAACATTTTAACTGATTTTAGGAAGGGAATTGCCCTATAAACAGGTTTGTAACTCATCTCCCCC ATGCAGCCTGAACAAGCTCAACAACAGCAACAATTAATGGTGCAGAACAACACAGGAAGCTTAAGCTTCAGCAGCCATTTGTCTAAGGAAGATGAAGAGATTTCCAGGTCGGCTCTTTCCACTTTCAGAGCTAAGGAAGAGGAGATCGAGAGGAAGAAGATGGAAGTAAGAGAGAAGGTTCAAGCTCAGTTAGGCCGAGTTGAAGAAGAAACCAAACGCCTTGCTTGCATCCGTGAGGAACTTGAGGCACTGGCAGATCCAATGAGGAAGGAAGTGGCACAAGTTCGTAAAAAGATCGATGCTGTAAACAAGGAATTAAAGCCTCTGGGACATACTTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTTGAAGCCTTTAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACGAAATTAATGGAGCTGGTGAGTGAAAGTGAGAGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAA MQPEQAQQQQQLMVQNNTGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQAQLGRVEEETKRLACIREELEALADPMRKEVAQVRKKIDAVNKELKPLGHTCQKKEKEYKEALEAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR* Homology
BLAST of CSPI03G34300 vs. ExPASy TrEMBL
Match: A0A0A0LGI7 (RAB6-interacting golgin OS=Cucumis sativus OX=3659 GN=Csa_3G751460 PE=3 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 6.6e-77 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of CSPI03G34300 vs. ExPASy TrEMBL
Match: A0A5D3DPH8 (RAB6-interacting golgin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003590 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76 Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of CSPI03G34300 vs. ExPASy TrEMBL
Match: A0A1S3B6L6 (RAB6-interacting golgin OS=Cucumis melo OX=3656 GN=LOC103486581 PE=3 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76 Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of CSPI03G34300 vs. ExPASy TrEMBL
Match: A0A6J1KYK3 (RAB6-interacting golgin OS=Cucurbita maxima OX=3661 GN=LOC111498737 PE=3 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74 Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of CSPI03G34300 vs. ExPASy TrEMBL
Match: A0A6J1G0J9 (RAB6-interacting golgin OS=Cucurbita moschata OX=3662 GN=LOC111449572 PE=3 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 1.4e-74 Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of CSPI03G34300 vs. NCBI nr
Match: XP_004137876.1 (GRB10-interacting GYF protein 2 [Cucumis sativus] >KGN59071.1 hypothetical protein Csa_000951 [Cucumis sativus]) HSP 1 Score: 296.6 bits (758), Expect = 1.4e-76 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of CSPI03G34300 vs. NCBI nr
Match: XP_008442808.1 (PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo] >KAA0043908.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa] >TYK25229.1 putative DNA double-strand break repair Rad50 ATPase isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 295.4 bits (755), Expect = 3.0e-76 Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of CSPI03G34300 vs. NCBI nr
Match: XP_038903091.1 (GRB10-interacting GYF protein 2-like [Benincasa hispida]) HSP 1 Score: 293.5 bits (750), Expect = 1.2e-75 Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0
BLAST of CSPI03G34300 vs. NCBI nr
Match: XP_022945279.1 (uncharacterized protein LOC111449572 [Cucurbita moschata] >XP_023005860.1 uncharacterized protein LOC111498737 [Cucurbita maxima] >XP_023539891.1 uncharacterized protein LOC111800435 [Cucurbita pepo subsp. pepo] >KAG6596553.1 hypothetical protein SDJN03_09733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028089.1 hypothetical protein SDJN02_09269 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 288.9 bits (738), Expect = 2.8e-74 Identity = 162/167 (97.01%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of CSPI03G34300 vs. NCBI nr
Match: XP_022144720.1 (uncharacterized protein LOC111014340 [Momordica charantia]) HSP 1 Score: 275.4 bits (703), Expect = 3.3e-70 Identity = 158/167 (94.61%), Postives = 161/167 (96.41%), Query Frame = 0
BLAST of CSPI03G34300 vs. TAIR 10
Match: AT3G09980.1 (Family of unknown function (DUF662) ) HSP 1 Score: 230.3 bits (586), Expect = 1.1e-60 Identity = 125/149 (83.89%), Postives = 142/149 (95.30%), Query Frame = 0
BLAST of CSPI03G34300 vs. TAIR 10
Match: AT2G36410.2 (Family of unknown function (DUF662) ) HSP 1 Score: 219.2 bits (557), Expect = 2.6e-57 Identity = 121/165 (73.33%), Postives = 149/165 (90.30%), Query Frame = 0
BLAST of CSPI03G34300 vs. TAIR 10
Match: AT2G36410.3 (Family of unknown function (DUF662) ) HSP 1 Score: 215.3 bits (547), Expect = 3.7e-56 Identity = 120/165 (72.73%), Postives = 147/165 (89.09%), Query Frame = 0
BLAST of CSPI03G34300 vs. TAIR 10
Match: AT2G36410.1 (Family of unknown function (DUF662) ) HSP 1 Score: 213.8 bits (543), Expect = 1.1e-55 Identity = 121/168 (72.02%), Postives = 149/168 (88.69%), Query Frame = 0
BLAST of CSPI03G34300 vs. TAIR 10
Match: AT3G52920.2 (Family of unknown function (DUF662) ) HSP 1 Score: 210.3 bits (534), Expect = 1.2e-54 Identity = 121/159 (76.10%), Postives = 141/159 (88.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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