CSPI03G33810 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G33810
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	F-box protein CPR30-like
Location	Chr3: 29702988 .. 29703503 (+)
RNA-Seq Expression	CSPI03G33810
Synteny	CSPI03G33810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTCACGAAGGAATATTTTATTGGTGGGGATATGGTGAACCAAGGATTAACGAAGTGGACTCTATTATAACATTTGACATGAGTGAAGAGATTTTTGGTAAAATTTCACTACCGGAGAGCTTCAATGACACAAAGCATAAAATAAGTTTAAGGGTTTTGAATAAATCCATTATCCTTTTTGTCTATCCATTTGAAAGTAATGAGACAAATATTGACATTTGGGAGATGGAGAAGGATGAATCTAGTGTTGTTTCGTGGTCGAAGCTATTGACCATTGACCCTCCTTTTGGAGTTGAGCATCCATTGTTGTTTGTAAGTTGTGAAGAACTGTTAATGGAGTCCAGTGAAGGACATGTGATTATGTATAACACGGCAACTCAACTATTCAAAAAGCTTCCAATAGAAGGGGATGTAACTTATGCAAAACCTCACAGATTTGAAGCTCATGATCTTTTTATTGAGAGTTTGTTACCGGTGGAAGGGGGAAGAGATATGATCAATTACGATTTTTAG

mRNA sequence

ATGTGTCACGAAGGAATATTTTATTGGTGGGGATATGGTGAACCAAGGATTAACGAAGTGGACTCTATTATAACATTTGACATGAGTGAAGAGATTTTTGGTAAAATTTCACTACCGGAGAGCTTCAATGACACAAAGCATAAAATAAGTTTAAGGGTTTTGAATAAATCCATTATCCTTTTTGTCTATCCATTTGAAAGTAATGAGACAAATATTGACATTTGGGAGATGGAGAAGGATGAATCTAGTGTTGTTTCGTGGTCGAAGCTATTGACCATTGACCCTCCTTTTGGAGTTGAGCATCCATTGTTGTTTGTAAGTTGTGAAGAACTGTTAATGGAGTCCAGTGAAGGACATGTGATTATGTATAACACGGCAACTCAACTATTCAAAAAGCTTCCAATAGAAGGGGATGTAACTTATGCAAAACCTCACAGATTTGAAGCTCATGATCTTTTTATTGAGAGTTTGTTACCGGTGGAAGGGGGAAGAGATATGATCAATTACGATTTTTAG

Coding sequence (CDS)

ATGTGTCACGAAGGAATATTTTATTGGTGGGGATATGGTGAACCAAGGATTAACGAAGTGGACTCTATTATAACATTTGACATGAGTGAAGAGATTTTTGGTAAAATTTCACTACCGGAGAGCTTCAATGACACAAAGCATAAAATAAGTTTAAGGGTTTTGAATAAATCCATTATCCTTTTTGTCTATCCATTTGAAAGTAATGAGACAAATATTGACATTTGGGAGATGGAGAAGGATGAATCTAGTGTTGTTTCGTGGTCGAAGCTATTGACCATTGACCCTCCTTTTGGAGTTGAGCATCCATTGTTGTTTGTAAGTTGTGAAGAACTGTTAATGGAGTCCAGTGAAGGACATGTGATTATGTATAACACGGCAACTCAACTATTCAAAAAGCTTCCAATAGAAGGGGATGTAACTTATGCAAAACCTCACAGATTTGAAGCTCATGATCTTTTTATTGAGAGTTTGTTACCGGTGGAAGGGGGAAGAGATATGATCAATTACGATTTTTAG

Protein sequence

MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIILFVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDMINYDF*

Homology

[Close]

BLAST of CSPI03G33810 vs. ExPASy Swiss-Prot
Match: Q9FH73 (F-box protein At5g41490 OS=Arabidopsis thaliana OX=3702 GN=At5g41490 PE=2 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.9e-04
Identity = 34/111 (30.63%), Postives = 48/111 (43.24%), Query Frame = 0


Query: 4   EGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISL----RVLNKSII 63
           +G  YW          +D II FD + E FG   LP  F  T    S      V  + + 
Sbjct: 213 KGNAYWPVVKSSSEANIDHIIYFDFTRESFGP-PLPLPFGATDRGYSYVNLSCVKEEKLA 272

Query: 64  LFVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEE 111
            F   + S +   +IW   K E+ +VSWSK L +D    ++ P+ F   EE
Sbjct: 273 AFFQHYISYKYEFEIWVTTKIEAEMVSWSKFLRMDLGPNIDIPITFFIDEE 322

[Close]

BLAST of CSPI03G33810 vs. ExPASy TrEMBL
Match: A0A5A7TRC3 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003120 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 132/171 (77.19%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 1   MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 60
           M HEG FY+WG+GE  I E D I+TFDMS+E+F KIS+PES++D KHK SL VLN+S++L
Sbjct: 214 MYHEGTFYFWGHGESSIFEADHIVTFDMSQEVFSKISVPESYDDKKHKTSLGVLNRSMVL 273

Query: 61  FVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMESSEGHV 120
           FVYPFESNE NIDIWEMEK+ESSVVSWSKLLTIDP  G+EHPLLFVS EELLMESSEGHV
Sbjct: 274 FVYPFESNEKNIDIWEMEKNESSVVSWSKLLTIDPTLGIEHPLLFVSSEELLMESSEGHV 333

Query: 121 IMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDMINYDF 172
           IMYNT T  FKKLPIEG+VTY KP+RFEA DLFI+SL+ VEGGRDMINY F
Sbjct: 334 IMYNTKTHRFKKLPIEGEVTYTKPNRFEATDLFIKSLVSVEGGRDMINYAF 384

[Close]

BLAST of CSPI03G33810 vs. ExPASy TrEMBL
Match: A0A1S4DUI5 (F-box/kelch-repeat protein At3g23880-like OS=Cucumis melo OX=3656 GN=LOC103487139 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 132/171 (77.19%), Postives = 149/171 (87.13%), Query Frame = 0


Query: 1   MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 60
           M HEG FY+WG+GE  I E D I+TFDMS+E+F KIS+PES++D KHK SL VLN+S++L
Sbjct: 129 MYHEGTFYFWGHGESSIFEADHIVTFDMSQEVFSKISVPESYDDKKHKTSLGVLNRSMVL 188

Query: 61  FVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMESSEGHV 120
           FVYPFESNE NIDIWEMEK+ESSVVSWSKLLTIDP  G+EHPLLFVS EELLMESSEGHV
Sbjct: 189 FVYPFESNEKNIDIWEMEKNESSVVSWSKLLTIDPTLGIEHPLLFVSSEELLMESSEGHV 248

Query: 121 IMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDMINYDF 172
           IMYNT T  FKKLPIEG+VTY KP+RFEA DLFI+SL+ VEGGRDMINY F
Sbjct: 249 IMYNTKTHRFKKLPIEGEVTYTKPNRFEATDLFIKSLVSVEGGRDMINYAF 299

[Close]

BLAST of CSPI03G33810 vs. ExPASy TrEMBL
Match: A0A1S3B6F9 (F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486535 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.5e-71
Identity = 130/170 (76.47%), Postives = 147/170 (86.47%), Query Frame = 0


Query: 1   MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 60
           M HEGIFY+WGYGE R++  D IITFDMS+E+ GKIS+PES++D KHK SL VLN SI+L
Sbjct: 211 MYHEGIFYFWGYGESRLSTADHIITFDMSQEVCGKISVPESYDDKKHKTSLGVLNSSIVL 270

Query: 61  FVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMESSEGHV 120
           FVYPFESNE NIDIWEM+KDESSVVSWSKLLTIDP  G+EHPLLFVS EELLMESSEGHV
Sbjct: 271 FVYPFESNEKNIDIWEMKKDESSVVSWSKLLTIDPTLGIEHPLLFVSSEELLMESSEGHV 330

Query: 121 IMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDMINYD 171
           IMYNT TQ  KKLPIEG+  Y  P+RF+A DLFI+SL+ VEGGRD+INYD
Sbjct: 331 IMYNTKTQESKKLPIEGEALYGIPNRFQAIDLFIKSLVSVEGGRDIINYD 380

[Close]

BLAST of CSPI03G33810 vs. ExPASy TrEMBL
Match: A0A5A7TQ58 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003090 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.5e-71
Identity = 130/170 (76.47%), Postives = 147/170 (86.47%), Query Frame = 0


Query: 1   MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 60
           M HEGIFY+WGYGE R++  D IITFDMS+E+ GKIS+PES++D KHK SL VLN SI+L
Sbjct: 211 MYHEGIFYFWGYGESRLSTADHIITFDMSQEVCGKISVPESYDDKKHKTSLGVLNSSIVL 270

Query: 61  FVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMESSEGHV 120
           FVYPFESNE NIDIWEM+KDESSVVSWSKLLTIDP  G+EHPLLFVS EELLMESSEGHV
Sbjct: 271 FVYPFESNEKNIDIWEMKKDESSVVSWSKLLTIDPTLGIEHPLLFVSSEELLMESSEGHV 330

Query: 121 IMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDMINYD 171
           IMYNT TQ  KKLPIEG+  Y  P+RF+A DLFI+SL+ VEGGRD+INYD
Sbjct: 331 IMYNTKTQESKKLPIEGEALYGIPNRFQAIDLFIKSLVSVEGGRDIINYD 380

[Close]

BLAST of CSPI03G33810 vs. ExPASy TrEMBL
Match: A0A5D3DPH7 (F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003060 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.3e-64
Identity = 127/174 (72.99%), Postives = 146/174 (83.91%), Query Frame = 0


Query: 1   MCHEGIFYWWGYGEPRINE---VDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKS 60
           M HEG FYWWG GEPRINE   ++ IITFDMSEE+FGKIS+P+S++D KHK SL VLN+S
Sbjct: 207 MYHEGTFYWWGCGEPRINEAGRIEHIITFDMSEEVFGKISVPKSYDDKKHKTSLGVLNRS 266

Query: 61  IILFVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMESSE 120
           I+LFVYPFESNETNIDIWEM+KDESSVVSWSKLLTI P FG+E PLLFVSCEELLMES  
Sbjct: 267 IVLFVYPFESNETNIDIWEMKKDESSVVSWSKLLTIVPTFGIEQPLLFVSCEELLMESRN 326

Query: 121 GHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDMINYDF 172
           GHVIMYN  TQ FKKLPIEG +   + +RFEA  L+I+SL+ +E GRDM +YDF
Sbjct: 327 GHVIMYNCKTQEFKKLPIEGQLIGVETNRFEA-TLYIKSLVSLE-GRDM-SYDF 377

[Close]

BLAST of CSPI03G33810 vs. NCBI nr
Match: XP_031738544.1 (F-box protein CPR1-like [Cucumis sativus] >XP_031738545.1 F-box protein CPR1-like [Cucumis sativus] >XP_031738546.1 F-box protein CPR1-like [Cucumis sativus] >KAE8651060.1 hypothetical protein Csa_002427 [Cucumis sativus])

HSP 1 Score: 362.8 bits (930), Expect = 1.6e-96
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 60
           MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL
Sbjct: 211 MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 270

Query: 61  FVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMESSEGHV 120
           FVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMESSEGHV
Sbjct: 271 FVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEELLMESSEGHV 330

Query: 121 IMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDMINYDF 172
           IMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDMINYDF
Sbjct: 331 IMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDMINYDF 381

[Close]

BLAST of CSPI03G33810 vs. NCBI nr
Match: XP_031738688.1 (F-box protein CPR1-like isoform X1 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 6.5e-82
Identity = 153/185 (82.70%), Postives = 160/185 (86.49%), Query Frame = 0


Query: 1   MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 60
           M HEGIFYWWG GEPRI+E D IITFDMSEEIFGK+SLPESF++ KHKI LRVLNKSI+L
Sbjct: 211 MYHEGIFYWWGEGEPRISETDHIITFDMSEEIFGKVSLPESFDNKKHKIVLRVLNKSIVL 270

Query: 61  FVYPFESN--------------ETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFV 120
           FVYP++SN              ETNIDIWEMEKDE  VVSWSKLLTIDPPFGVEHPLLFV
Sbjct: 271 FVYPYKSNETNIGTYETIIGTDETNIDIWEMEKDEFGVVSWSKLLTIDPPFGVEHPLLFV 330

Query: 121 SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDM 172
           SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLL VE  RDM
Sbjct: 331 SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLLVEERRDM 390

[Close]

BLAST of CSPI03G33810 vs. NCBI nr
Match: XP_031738689.1 (F-box protein CPR1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 6.5e-82
Identity = 153/185 (82.70%), Postives = 160/185 (86.49%), Query Frame = 0


Query: 1   MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 60
           M HEGIFYWWG GEPRI+E D IITFDMSEEIFGK+SLPESF++ KHKI LRVLNKSI+L
Sbjct: 164 MYHEGIFYWWGEGEPRISETDHIITFDMSEEIFGKVSLPESFDNKKHKIVLRVLNKSIVL 223

Query: 61  FVYPFESN--------------ETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFV 120
           FVYP++SN              ETNIDIWEMEKDE  VVSWSKLLTIDPPFGVEHPLLFV
Sbjct: 224 FVYPYKSNETNIGTYETIIGTDETNIDIWEMEKDEFGVVSWSKLLTIDPPFGVEHPLLFV 283

Query: 121 SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDM 172
           SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLL VE  RDM
Sbjct: 284 SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLLVEERRDM 343

[Close]

BLAST of CSPI03G33810 vs. NCBI nr
Match: KAE8651056.1 (hypothetical protein Csa_002370 [Cucumis sativus])

HSP 1 Score: 314.3 bits (804), Expect = 6.5e-82
Identity = 153/185 (82.70%), Postives = 160/185 (86.49%), Query Frame = 0


Query: 1    MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 60
            M HEGIFYWWG GEPRI+E D IITFDMSEEIFGK+SLPESF++ KHKI LRVLNKSI+L
Sbjct: 1167 MYHEGIFYWWGEGEPRISETDHIITFDMSEEIFGKVSLPESFDNKKHKIVLRVLNKSIVL 1226

Query: 61   FVYPFESN--------------ETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFV 120
            FVYP++SN              ETNIDIWEMEKDE  VVSWSKLLTIDPPFGVEHPLLFV
Sbjct: 1227 FVYPYKSNETNIGTYETIIGTDETNIDIWEMEKDEFGVVSWSKLLTIDPPFGVEHPLLFV 1286

Query: 121  SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDM 172
            SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLL VE  RDM
Sbjct: 1287 SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLLVEERRDM 1346

[Close]

BLAST of CSPI03G33810 vs. NCBI nr
Match: XP_031738543.1 (F-box protein CPR1-like [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 9.3e-81
Identity = 147/185 (79.46%), Postives = 159/185 (85.95%), Query Frame = 0


Query: 1   MCHEGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISLRVLNKSIIL 60
           M HEGIFYWWGYGEPRI+E D IITFDMSEEIFGK+SLPES++D KHKI LRVLNKSI+L
Sbjct: 211 MYHEGIFYWWGYGEPRISERDHIITFDMSEEIFGKVSLPESYDDKKHKIVLRVLNKSIVL 270

Query: 61  FVYPFESN--------------ETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFV 120
           FVYP++SN              ETNIDIWEMEKDE  VVSWSKLLTIDPPFGVEHPLLFV
Sbjct: 271 FVYPYKSNETNIGIFETIVGTDETNIDIWEMEKDEFGVVSWSKLLTIDPPFGVEHPLLFV 330

Query: 121 SCEELLMESSEGHVIMYNTATQLFKKLPIEGDVTYAKPHRFEAHDLFIESLLPVEGGRDM 172
           SCEE+LMESSEGHVIMYN  TQ FKKLPIEGDVTY KPHRFEAHDLFI+SL+ VEGG+D+
Sbjct: 331 SCEEMLMESSEGHVIMYNNKTQQFKKLPIEGDVTYVKPHRFEAHDLFIKSLVSVEGGKDI 390

[Close]

BLAST of CSPI03G33810 vs. TAIR 10
Match: AT5G41490.1 (F-box associated ubiquitination effector family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.4e-05
Identity = 34/111 (30.63%), Postives = 48/111 (43.24%), Query Frame = 0


Query: 4   EGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTKHKISL----RVLNKSII 63
           +G  YW          +D II FD + E FG   LP  F  T    S      V  + + 
Sbjct: 213 KGNAYWPVVKSSSEANIDHIIYFDFTRESFGP-PLPLPFGATDRGYSYVNLSCVKEEKLA 272

Query: 64  LFVYPFESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEE 111
            F   + S +   +IW   K E+ +VSWSK L +D    ++ P+ F   EE
Sbjct: 273 AFFQHYISYKYEFEIWVTTKIEAEMVSWSKFLRMDLGPNIDIPITFFIDEE 322

[Close]

BLAST of CSPI03G33810 vs. TAIR 10
Match: AT5G41510.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 45.8 bits (107), Expect = 4.0e-05
Identity = 36/110 (32.73%), Postives = 48/110 (43.64%), Query Frame = 0


Query: 4   EGIFYWWGYGEPRINEVDSIITFDMSEEIFGK-ISLPESFNDTKHKISLRVLNKSIILFV 63
           +G  YW           D II FD + E FG  ++LP     +   +S     K   LF 
Sbjct: 211 KGNTYWPAKERSTQGFQDYIIRFDFTRERFGPLLALPTDRESSFVSLSCVKEEKLAALFK 270

Query: 64  YPF--ESNETNIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSCEE 111
           +    +S E   +IW   K E  +VSWSK L +D    +E PL F   EE
Sbjct: 271 HRLHHDSYEYEFEIWITTKIEVEMVSWSKFLRMDMRPKMELPLTFYIDEE 320

[Close]

BLAST of CSPI03G33810 vs. TAIR 10
Match: AT3G17560.1 (F-box and associated interaction domains-containing protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.2e-04
Identity = 32/107 (29.91%), Postives = 56/107 (52.34%), Query Frame = 0


Query: 4   EGIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLP-ESFNDTKHKISLRVLNKSIILFV 63
           +G  YW    + R     S+++FD S E F  + +P     D    ++L V+ +  +  +
Sbjct: 252 KGNAYWVYMSKRRGVNDYSLLSFDFSTESFQHLCVPFHQEADCFGTMALSVVREEHLSLL 311

Query: 64  YPFESNET-NIDIWEMEKDESSVVSWSKLLTIDPPFGVEHPLLFVSC 109
           Y  +S ET  ++IW  ++ +++ VSW K LT+D    + H L+F SC
Sbjct: 312 Y--QSCETLKVEIWMTKEIDTTFVSWKKFLTVDLEPHLPHLLMF-SC 355

[Close]

BLAST of CSPI03G33810 vs. TAIR 10
Match: AT5G62830.1 (F-box associated ubiquitination effector family protein )

HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04
Identity = 28/92 (30.43%), Postives = 48/92 (52.17%), Query Frame = 0


Query: 5   GIFYWWGYGEPRINEVDSIITFDMSEEIFGKISLPESFNDTK-HKISLRVLNKSIILFVY 64
           G  YW  + E   N+  S+++FD S E F ++         +   I+L V+ +  +   Y
Sbjct: 36  GNTYWVSWIEKGDNDDYSLLSFDFSTERFQRLCAHFHHQPCRVDTIALSVVREEHLSLFY 95

Query: 65  PFESNET-NIDIWEMEKDESSVVSWSKLLTID 95
             +S +T  ++IW   + E++ VSWSK LT+D
Sbjct: 96  --QSRQTLKVEIWVTVEIETTFVSWSKFLTLD 125

The following BLAST results are available for this feature:

BLAST of CSPI03G33810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FH73	1.9e-04	30.63	F-box protein At5g41490 OS=Arabidopsis thaliana OX=3702 GN=At5g41490 PE=2 SV=1	[more]

BLAST of CSPI03G33810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRC3	1.7e-72	77.19	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S4DUI5	1.7e-72	77.19	F-box/kelch-repeat protein At3g23880-like OS=Cucumis melo OX=3656 GN=LOC10348713...	[more]
A0A1S3B6F9	9.5e-71	76.47	F-box protein CPR30-like OS=Cucumis melo OX=3656 GN=LOC103486535 PE=4 SV=1	[more]
A0A5A7TQ58	9.5e-71	76.47	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5D3DPH7	2.3e-64	72.99	F-box protein CPR30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of CSPI03G33810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031738544.1	1.6e-96	100.00	F-box protein CPR1-like [Cucumis sativus] >XP_031738545.1 F-box protein CPR1-lik...	[more]
XP_031738688.1	6.5e-82	82.70	F-box protein CPR1-like isoform X1 [Cucumis sativus]	[more]
XP_031738689.1	6.5e-82	82.70	F-box protein CPR1-like isoform X2 [Cucumis sativus]	[more]
KAE8651056.1	6.5e-82	82.70	hypothetical protein Csa_002370 [Cucumis sativus]	[more]
XP_031738543.1	9.3e-81	79.46	F-box protein CPR1-like [Cucumis sativus]	[more]

BLAST of CSPI03G33810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41490.1	1.4e-05	30.63	F-box associated ubiquitination effector family protein	[more]
AT5G41510.1	4.0e-05	32.73	F-box and associated interaction domains-containing protein	[more]
AT3G17560.1	1.2e-04	29.91	F-box and associated interaction domains-containing protein	[more]
AT5G62830.1	3.4e-04	30.43	F-box associated ubiquitination effector family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006527	F-box associated domain, type 1	PFAM	PF07734	FBA_1	coord: 4..125 e-value: 1.1E-12 score: 48.2
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 2..100 e-value: 5.5E-11 score: 40.2
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 4..167
None	No IPR available	PANTHER	PTHR47993:SF44	F-BOX PROTEIN CPR30-LIKE ISOFORM X1	coord: 4..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G33810.1	CSPI03G33810.1	mRNA