CSPI03G31120 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCCTCAAAGCTAAATGGGCTGGGCCGGAATGTAAACTTCTGAAATTGCAAAATATCTCCGACATCGAGAGCCGTCTCAGCTCCATTTCTTCCCGATGGCTGCAATCAACCTTCCTCTAATCCACACTCCTCCGTCAATTCAGAATTTTTCAATCAAATCTTCCCAGAAAACTTTCAAATTCTTCCCCTTCTCTCAATCTTATCCTTCTCCTCTCCTTTCCAGTTCCTTCAAGCTCTACACTACAGCCAAAGCTCGCGCTTCTTCCTTAATCGCTTTTGCTGCCAAGAATCTATCAGAATCTGAGCTCAACTCCGTGCCGGAGACCGCCGGGGAAATTGCTGGAAAATTTCCTTCTGACGCGGGTGTTTATGCCGTTTACGATAAGGAGGGCGATGTTCAGTTTATCGGCATTACAAGAAACATAGCGGGGAGCGTCGCCACTCACTGGAGATCAGTACCGGAGCTCTGCGTTTCTGTCAAGGTTGGGGTTGTCTTTCGCTGTTGTTTCTCTCTTCGTTTTTCTCATTTTCAGCTCTAATTGATTGTTGGTAGGATTTTTTTGAGGTTATTGTTTTAGTGTGATGCAAGATGAATTAAACATGAGGATGCTATACTCTGTGGAGTACAGATATTCTTCGTTTGGAAGTAATCTTGAAAGGTTTCGTTTGTTCTTGCGAAAAATTCTGTGCACATGAATTCATTATTGTCTCCAATGAACTGATGCTTCATTTTTTTGTTAATCGAGTCTTGGATACTTAATCTAGTCTAGGCTTCTTAGTTTTCGTCGGTATTGTAATGATGCATCTGCGTCATAATCATGTGGTCTTCTTCGTGCTCTGCTGCTGATAGTTGTTCCGTTAGATCTTCACTCATCAGTGCATTGGTTAAAAATTGAAATGGTGTAGAAGTAAAAGATAGCTGGAACTAGAATTAGGGGAATTCGTGCAAATTGCAATTAATGATGGGAGATAGTCAGTCACTCACTTGCTGGACACAGGGAAATTTGTTTTTCACTTGCTGCTCTTGCAATCTTATAGTTCTTTAGACTTTGCAAAATTGTTTGAACATATATTTCAACATTATTATGGTTGGTAGCTGACATCAAATCGCTGGCAGTTTTCTTAAAAAAGAGGGTGCGTTTATCAGCTTTCTGAATTAGGACCTTCTGAGTGGCAGTTACTCTTTACATGATCATTTTTGTTCTGCAATGGGTATATCTCTTTACGGATTGAACGTATATAGGACTGATACTCCTTTTTGCACGCCTTGAATATGCCCGTTGTGGAAACTCATAGGATATTAGATTGTAAGAAAGTGGCCACCAATGTTTGTACTCATTCCCCATTTGTTAGAACATATGCTTGATAATTATCAACCTACCTTACTCTACATGTTTTAGTGCATTTGATTCTCATGTGAATTAAACTTGTAATGTAAATAGTGATCCGAGGAACCTAAATTTACTCACAAAAGAAGTAGGAATAGTTCTAGCCTTTAGGAAGCAAATTATAATTGAGAGGTACTGTGCTACTTTATCTATTCTTTTGATGAGGAGTTGTGCTAGAATTTGAGTTTTCTGTGCAGTAGAATTCTGATCTTGCCTGATTTTCTAATTTTGAATGTTTACTTTCTGTAGTTTGGAGTAGTAGATGAACCTGATAGAACAAACTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAAGTCACCGGGAAGATACCGCCAGGTAATGAATCTGGCAATGCAACATGGACAAGGCAGCCACCAAAGAAGAAGGCCGATCTGAGGTTGACGCCTGGTCGACATGTCCAACTTACAGTCCCATTGGAAGAACTCATTGATCAATTAGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGCTCCAGAAGCGCACCAATGTGTGGTTTTTCGCAAAGAGTAGTAGGGATTCTTGAAGCTGTAGGTGTAGATTACGAGAGCGTTGATGTGCTCGATGAAGAATACAACAACGGGCTAAGGGAAACTCTCAAAACATATAGTAACTGGCCTACATTTCCTCAAATCTTCGTGGATGGGCAATTAATTGGAGGTTGTGACATTCTTAGTTCTATGCATGAAACAGGTGAACTTGCTGGTTTGTTCAAGAAGTGATTATCAAATTTTAACTTTCAGCAACCAATATTTTGGTGGGGTTAGAGGCATAATTGGAAGGAGGTGAGAATGTGCCTGCTTTCCATGCTTTTGCCAGTTGCTCCATAGAAGTGTAGTTTAAAGTTTCATCAAGTCGAACAACTAATTTGTTAAAAAGCCTTCTCTCCCTCTTCTTATTTCCTCTCAAAGCAAGACCTGAAGTTTTGGGGATTTTGAAATTGTTTATTTTACCTTCAAAATTAGTAGATGGTTAAAGCTTGAAATCGATAGA GTTCCTCAAAGCTAAATGGGCTGGGCCGGAATGTAAACTTCTGAAATTGCAAAATATCTCCGACATCGAGAGCCGTCTCAGCTCCATTTCTTCCCGATGGCTGCAATCAACCTTCCTCTAATCCACACTCCTCCGTCAATTCAGAATTTTTCAATCAAATCTTCCCAGAAAACTTTCAAATTCTTCCCCTTCTCTCAATCTTATCCTTCTCCTCTCCTTTCCAGTTCCTTCAAGCTCTACACTACAGCCAAAGCTCGCGCTTCTTCCTTAATCGCTTTTGCTGCCAAGAATCTATCAGAATCTGAGCTCAACTCCGTGCCGGAGACCGCCGGGGAAATTGCTGGAAAATTTCCTTCTGACGCGGGTGTTTATGCCGTTTACGATAAGGAGGGCGATGTTCAGTTTATCGGCATTACAAGAAACATAGCGGGGAGCGTCGCCACTCACTGGAGATCAGTACCGGAGCTCTGCGTTTCTGTCAAGTTTGGAGTAGTAGATGAACCTGATAGAACAAACTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAAGTCACCGGGAAGATACCGCCAGGTAATGAATCTGGCAATGCAACATGGACAAGGCAGCCACCAAAGAAGAAGGCCGATCTGAGGTTGACGCCTGGTCGACATGTCCAACTTACAGTCCCATTGGAAGAACTCATTGATCAATTAGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGCTCCAGAAGCGCACCAATGTGTGGTTTTTCGCAAAGAGTAGTAGGGATTCTTGAAGCTGTAGGTGTAGATTACGAGAGCGTTGATGTGCTCGATGAAGAATACAACAACGGGCTAAGGGAAACTCTCAAAACATATAGTAACTGGCCTACATTTCCTCAAATCTTCGTGGATGGGCAATTAATTGGAGGTTGTGACATTCTTAGTTCTATGCATGAAACAGGTGAACTTGCTGGTTTGTTCAAGAAGTGATTATCAAATTTTAACTTTCAGCAACCAATATTTTGGTGGGGTTAGAGGCATAATTGGAAGGAGGTGAGAATGTGCCTGCTTTCCATGCTTTTGCCAGTTGCTCCATAGAAGTGTAGTTTAAAGTTTCATCAAGTCGAACAACTAATTTGTTAAAAAGCCTTCTCTCCCTCTTCTTATTTCCTCTCAAAGCAAGACCTGAAGTTTTGGGGATTTTGAAATTGTTTATTTTACCTTCAAAATTAGTAGATGGTTAAAGCTTGAAATCGATAGA ATGGCTGCAATCAACCTTCCTCTAATCCACACTCCTCCGTCAATTCAGAATTTTTCAATCAAATCTTCCCAGAAAACTTTCAAATTCTTCCCCTTCTCTCAATCTTATCCTTCTCCTCTCCTTTCCAGTTCCTTCAAGCTCTACACTACAGCCAAAGCTCGCGCTTCTTCCTTAATCGCTTTTGCTGCCAAGAATCTATCAGAATCTGAGCTCAACTCCGTGCCGGAGACCGCCGGGGAAATTGCTGGAAAATTTCCTTCTGACGCGGGTGTTTATGCCGTTTACGATAAGGAGGGCGATGTTCAGTTTATCGGCATTACAAGAAACATAGCGGGGAGCGTCGCCACTCACTGGAGATCAGTACCGGAGCTCTGCGTTTCTGTCAAGTTTGGAGTAGTAGATGAACCTGATAGAACAAACTTAACACAAGCATGGAAGTCATGGATGGAAGAACACATAAAAGTCACCGGGAAGATACCGCCAGGTAATGAATCTGGCAATGCAACATGGACAAGGCAGCCACCAAAGAAGAAGGCCGATCTGAGGTTGACGCCTGGTCGACATGTCCAACTTACAGTCCCATTGGAAGAACTCATTGATCAATTAGTGAAGGAGAACAAGGTTGTTGCATTCATCAAGGGCTCCAGAAGCGCACCAATGTGTGGTTTTTCGCAAAGAGTAGTAGGGATTCTTGAAGCTGTAGGTGTAGATTACGAGAGCGTTGATGTGCTCGATGAAGAATACAACAACGGGCTAAGGGAAACTCTCAAAACATATAGTAACTGGCCTACATTTCCTCAAATCTTCGTGGATGGGCAATTAATTGGAGGTTGTGACATTCTTAGTTCTATGCATGAAACAGGTGAACTTGCTGGTTTGTTCAAGAAGTGA MAAINLPLIHTPPSIQNFSIKSSQKTFKFFPFSQSYPSPLLSSSFKLYTTAKARASSLIAFAAKNLSESELNSVPETAGEIAGKFPSDAGVYAVYDKEGDVQFIGITRNIAGSVATHWRSVPELCVSVKFGVVDEPDRTNLTQAWKSWMEEHIKVTGKIPPGNESGNATWTRQPPKKKADLRLTPGRHVQLTVPLEELIDQLVKENKVVAFIKGSRSAPMCGFSQRVVGILEAVGVDYESVDVLDEEYNNGLRETLKTYSNWPTFPQIFVDGQLIGGCDILSSMHETGELAGLFKK* Homology
BLAST of CSPI03G31120 vs. ExPASy Swiss-Prot
Match: Q8H7F6 (Bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GRXS16 PE=1 SV=2) HSP 1 Score: 359.0 bits (920), Expect = 5.2e-98 Identity = 179/263 (68.06%), Postives = 216/263 (82.13%), Query Frame = 0
BLAST of CSPI03G31120 vs. ExPASy Swiss-Prot
Match: Q2QX01 (Monothiol glutaredoxin-S12, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS12 PE=2 SV=1) HSP 1 Score: 320.9 bits (821), Expect = 1.6e-86 Identity = 166/264 (62.88%), Postives = 196/264 (74.24%), Query Frame = 0
BLAST of CSPI03G31120 vs. ExPASy Swiss-Prot
Match: Q6PBM1 (Glutaredoxin-related protein 5, mitochondrial OS=Danio rerio OX=7955 GN=glrx5 PE=2 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 6.5e-24 Identity = 55/131 (41.98%), Postives = 87/131 (66.41%), Query Frame = 0
BLAST of CSPI03G31120 vs. ExPASy Swiss-Prot
Match: Q0IWL9 (Monothiol glutaredoxin-S11 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS11 PE=2 SV=2) HSP 1 Score: 112.5 bits (280), Expect = 8.5e-24 Identity = 48/102 (47.06%), Postives = 74/102 (72.55%), Query Frame = 0
BLAST of CSPI03G31120 vs. ExPASy Swiss-Prot
Match: Q68W05 (Probable monothiol glutaredoxin 2 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=grxC2 PE=3 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 2.5e-23 Identity = 45/99 (45.45%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of CSPI03G31120 vs. ExPASy TrEMBL
Match: A0A0A0LF87 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G731030 PE=3 SV=1) HSP 1 Score: 586.6 bits (1511), Expect = 5.6e-164 Identity = 292/296 (98.65%), Postives = 292/296 (98.65%), Query Frame = 0
BLAST of CSPI03G31120 vs. ExPASy TrEMBL
Match: A0A6J1GAT7 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111452232 PE=3 SV=1) HSP 1 Score: 547.0 bits (1408), Expect = 5.0e-152 Identity = 270/295 (91.53%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of CSPI03G31120 vs. ExPASy TrEMBL
Match: A0A6J1I8B1 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111470101 PE=3 SV=1) HSP 1 Score: 546.2 bits (1406), Expect = 8.5e-152 Identity = 270/295 (91.53%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of CSPI03G31120 vs. ExPASy TrEMBL
Match: A0A5D3DMV3 (Bifunctional monothiol glutaredoxin-S16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00630 PE=3 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 2.5e-151 Identity = 271/296 (91.55%), Postives = 277/296 (93.58%), Query Frame = 0
BLAST of CSPI03G31120 vs. ExPASy TrEMBL
Match: A0A1S3B6C9 (bifunctional monothiol glutaredoxin-S16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486275 PE=3 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 2.5e-151 Identity = 271/296 (91.55%), Postives = 277/296 (93.58%), Query Frame = 0
BLAST of CSPI03G31120 vs. NCBI nr
Match: XP_004137706.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucumis sativus] >KGN58741.1 hypothetical protein Csa_001627 [Cucumis sativus]) HSP 1 Score: 586.6 bits (1511), Expect = 1.2e-163 Identity = 292/296 (98.65%), Postives = 292/296 (98.65%), Query Frame = 0
BLAST of CSPI03G31120 vs. NCBI nr
Match: XP_022949016.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita moschata] >KAG6596337.1 Bifunctional monothiol glutaredoxin-S16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027889.1 Bifunctional monothiol glutaredoxin-S16, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 547.0 bits (1408), Expect = 1.0e-151 Identity = 270/295 (91.53%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of CSPI03G31120 vs. NCBI nr
Match: XP_022971349.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucurbita maxima]) HSP 1 Score: 546.2 bits (1406), Expect = 1.7e-151 Identity = 270/295 (91.53%), Postives = 280/295 (94.92%), Query Frame = 0
BLAST of CSPI03G31120 vs. NCBI nr
Match: XP_008442396.1 (PREDICTED: bifunctional monothiol glutaredoxin-S16, chloroplastic [Cucumis melo] >KAA0044185.1 bifunctional monothiol glutaredoxin-S16 [Cucumis melo var. makuwa] >TYK24947.1 bifunctional monothiol glutaredoxin-S16 [Cucumis melo var. makuwa]) HSP 1 Score: 544.7 bits (1402), Expect = 5.1e-151 Identity = 271/296 (91.55%), Postives = 277/296 (93.58%), Query Frame = 0
BLAST of CSPI03G31120 vs. NCBI nr
Match: XP_038906340.1 (bifunctional monothiol glutaredoxin-S16, chloroplastic [Benincasa hispida]) HSP 1 Score: 544.7 bits (1402), Expect = 5.1e-151 Identity = 267/295 (90.51%), Postives = 278/295 (94.24%), Query Frame = 0
BLAST of CSPI03G31120 vs. TAIR 10
Match: AT2G38270.1 (CAX-interacting protein 2 ) HSP 1 Score: 359.0 bits (920), Expect = 3.7e-99 Identity = 179/263 (68.06%), Postives = 216/263 (82.13%), Query Frame = 0
BLAST of CSPI03G31120 vs. TAIR 10
Match: AT3G54900.1 (CAX interacting protein 1 ) HSP 1 Score: 109.4 bits (272), Expect = 5.1e-24 Identity = 50/100 (50.00%), Postives = 69/100 (69.00%), Query Frame = 0
BLAST of CSPI03G31120 vs. TAIR 10
Match: AT4G04950.1 (thioredoxin family protein ) HSP 1 Score: 107.1 bits (266), Expect = 2.5e-23 Identity = 48/101 (47.52%), Postives = 70/101 (69.31%), Query Frame = 0
BLAST of CSPI03G31120 vs. TAIR 10
Match: AT3G15660.1 (glutaredoxin 4 ) HSP 1 Score: 93.2 bits (230), Expect = 3.8e-19 Identity = 40/99 (40.40%), Postives = 67/99 (67.68%), Query Frame = 0
BLAST of CSPI03G31120 vs. TAIR 10
Match: AT3G15660.2 (glutaredoxin 4 ) HSP 1 Score: 93.2 bits (230), Expect = 3.8e-19 Identity = 40/99 (40.40%), Postives = 67/99 (67.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|