CSPI03G30630 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G30630
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr3: 28012095 .. 28012304 (+)
RNA-Seq Expression	CSPI03G30630
Synteny	CSPI03G30630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCAATGGAATTGCTCAATGAAGCGGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGATTCACCTTCATCAGAGCGTTATGCAGGACATCCTTGAAAGAAAAGGATGTATTGGAAGATGCCCATCAACTGTTTAAGAAAATGAAGGCCTGCTGA

mRNA sequence

ATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCAATGGAATTGCTCAATGAAGCGGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGATTCACCTTCATCAGAGCGTTATGCAGGACATCCTTGAAAGAAAAGGATGTATTGGAAGATGCCCATCAACTGTTTAAGAAAATGAAGGCCTGCTGA

Coding sequence (CDS)

ATGGATGGCTTGTGTAAGGTCGGCAGATCAGACGAGGCAATGGAATTGCTCAATGAAGCGGAGGAAAATGGTTTAAAACCAAGTGTTGTCACTTTCAACACCCTCTTCAATGGATTCACCTTCATCAGAGCGTTATGCAGGACATCCTTGAAAGAAAAGGATGTATTGGAAGATGCCCATCAACTGTTTAAGAAAATGAAGGCCTGCTGA

Protein sequence

MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAHQLFKKMKAC*

Homology

[Close]

BLAST of CSPI03G30630 vs. ExPASy Swiss-Prot
Match: Q9M9X9 (Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g06710 PE=3 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.1e-06
Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFI 43
           +DGLCKVG++DEA +L+   EE G +P+VVT+  + +GF  I
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792

[Close]

BLAST of CSPI03G30630 vs. ExPASy Swiss-Prot
Match: Q76C99 (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 7.1e-06
Identity = 28/68 (41.18%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60
           ++G C  G+ DEAM+LL+     GLKP+ VT++TL NG+      C+ S      +EDA 
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGY------CKISR-----MEDAL 574

Query: 61  QLFKKMKA 69
            LFK+M++
Sbjct: 578 VLFKEMES 574

[Close]

BLAST of CSPI03G30630 vs. ExPASy Swiss-Prot
Match: Q9C8T7 (Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX=3702 GN=At1g63330 PE=2 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-05
Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60
           ++G+CK G+ D+  +L       G+KP+VVT+NT+ +G      LC      K +L++A+
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG------LC-----SKRLLQEAY 492

Query: 61  QLFKKMK 68
            L KKMK
Sbjct: 497 ALLKKMK 492

[Close]

BLAST of CSPI03G30630 vs. ExPASy Swiss-Prot
Match: Q9LUR2 (Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g16710 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-05
Identity = 24/67 (35.82%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60
           + G+CK+G+ ++A +L       G+KP+V+T+ T+ +GF      CR  L     + +A 
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF------CRRGL-----IHEAD 495

Query: 61  QLFKKMK 68
            LFKKMK
Sbjct: 500 SLFKKMK 495

[Close]

BLAST of CSPI03G30630 vs. ExPASy Swiss-Prot
Match: Q9LVQ5 (Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX=3702 GN=At5g55840 PE=3 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 1.6e-05
Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF 40
           +DGLCK G  DEA+ LLNE  ++G+ P +VT++ L NGF
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 448

[Close]

BLAST of CSPI03G30630 vs. ExPASy TrEMBL
Match: A0A0A0LF40 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728080 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26
Identity = 61/62 (98.39%), Postives = 62/62 (100.00%), Query Frame = 0


Query: 1  MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60
          MDGLC+VGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH
Sbjct: 1  MDGLCRVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60

Query: 61 QL 63
          QL
Sbjct: 61 QL 62

[Close]

BLAST of CSPI03G30630 vs. ExPASy TrEMBL
Match: A0A6J1DW66 (pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charantia OX=3673 GN=LOC111024057 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.4e-17
Identity = 59/131 (45.04%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF--------------------- 60
           MDGLCKVGRSDEAMELLNEAEENGL+PSVVTFNTLFNG+                     
Sbjct: 243 MDGLCKVGRSDEAMELLNEAEENGLEPSVVTFNTLFNGYCKEGRPLDGIHVLKKMKQMNC 302

Query: 61  -------------------------------------------TFIRALCRTSLKEKDVL 68
                                                      TF+RALCR S KEKD+L
Sbjct: 303 MPDRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSWKEKDLL 362

[Close]

BLAST of CSPI03G30630 vs. ExPASy TrEMBL
Match: A0A6J1F9P1 (pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata OX=3662 GN=LOC111442091 PE=4 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.5e-16
Identity = 56/131 (42.75%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF--------------------- 60
           MDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNG+                     
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  -------------------------------------------TFIRALCRTSLKEKDVL 68
                                                      TF+RALCR + KEKD+L
Sbjct: 310 TPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLL 369

[Close]

BLAST of CSPI03G30630 vs. ExPASy TrEMBL
Match: A0A6J1J506 (pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111481420 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.0e-15
Identity = 56/131 (42.75%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF--------------------- 60
           MDGLCKVGRSDEAMELL+EAE NG+KPSVVTFNTLFNG+                     
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEGNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  -------------------------------------------TFIRALCRTSLKEKDVL 68
                                                      TF+RALCR + KEKD+L
Sbjct: 310 TPDRISYSTLLHGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLL 369

[Close]

BLAST of CSPI03G30630 vs. ExPASy TrEMBL
Match: A0A2I4EIR4 (pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Juglans regia OX=51240 GN=LOC108989956 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.0e-12
Identity = 50/131 (38.17%), Postives = 60/131 (45.80%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF--------------------- 60
           MDG CKVGRSDEAMELL+EAEE GL P+VV++NTLF G+                     
Sbjct: 279 MDGFCKVGRSDEAMELLDEAEEMGLTPNVVSYNTLFQGYCKEGRPLEGIGVLKQMKQRNC 338

Query: 61  -------------------------------------------TFIRALCRTSLKEKDVL 68
                                                      TF+R LCR S KEKD+L
Sbjct: 339 MPDYICYSTLLHGLLKWGKIRSALRTYKEMVGDGFEVDERMMNTFLRRLCRRSWKEKDML 398

[Close]

BLAST of CSPI03G30630 vs. NCBI nr
Match: KAE8650970.1 (hypothetical protein Csa_000996 [Cucumis sativus])

HSP 1 Score: 142.9 bits (359), Expect = 1.0e-30
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0


Query: 1  MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60
          MDGLC+VGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH
Sbjct: 1  MDGLCRVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60

Query: 61 QLFKKMKAC 70
          QLFKKMKAC
Sbjct: 61 QLFKKMKAC 69

[Close]

BLAST of CSPI03G30630 vs. NCBI nr
Match: XP_022157329.1 (pentatricopeptide repeat-containing protein At1g09900-like [Momordica charantia])

HSP 1 Score: 97.4 bits (241), Expect = 5.1e-17
Identity = 59/131 (45.04%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF--------------------- 60
           MDGLCKVGRSDEAMELLNEAEENGL+PSVVTFNTLFNG+                     
Sbjct: 243 MDGLCKVGRSDEAMELLNEAEENGLEPSVVTFNTLFNGYCKEGRPLDGIHVLKKMKQMNC 302

Query: 61  -------------------------------------------TFIRALCRTSLKEKDVL 68
                                                      TF+RALCR S KEKD+L
Sbjct: 303 MPDRISYTTLLHGLIKWGKIRTALRTYKEMVSSGHSVEEKMMNTFMRALCRRSWKEKDLL 362

[Close]

BLAST of CSPI03G30630 vs. NCBI nr
Match: XP_023528121.1 (pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.7 bits (234), Expect = 3.3e-16
Identity = 57/131 (43.51%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF--------------------- 60
           MDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNG+                     
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  -------------------------------------------TFIRALCRTSLKEKDVL 68
                                                      TF+RALCR S KEKD+L
Sbjct: 310 TPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLL 369

[Close]

BLAST of CSPI03G30630 vs. NCBI nr
Match: KAG7017186.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 94.7 bits (234), Expect = 3.3e-16
Identity = 57/131 (43.51%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF--------------------- 60
           MDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNG+                     
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  -------------------------------------------TFIRALCRTSLKEKDVL 68
                                                      TF+RALCR S KEKD+L
Sbjct: 310 TPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRSWKEKDLL 369

[Close]

BLAST of CSPI03G30630 vs. NCBI nr
Match: KAG6580429.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 93.6 bits (231), Expect = 7.3e-16
Identity = 56/131 (42.75%), Postives = 65/131 (49.62%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF--------------------- 60
           MDGLCKVGRSDEAMELL+EAE+NG+KPSVVTFNTLFNG+                     
Sbjct: 250 MDGLCKVGRSDEAMELLSEAEQNGVKPSVVTFNTLFNGYCKEGRPLDGIRVLKKMKQMNC 309

Query: 61  -------------------------------------------TFIRALCRTSLKEKDVL 68
                                                      TF+RALCR + KEKD+L
Sbjct: 310 TPDRISYSTLLQGLIKWGKIRTALRTYKEMVSSGHSIEEKMMNTFMRALCRRTWKEKDLL 369

[Close]

BLAST of CSPI03G30630 vs. TAIR 10
Match: AT1G06710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 50.8 bits (120), Expect = 5.1e-07
Identity = 21/42 (50.00%), Postives = 31/42 (73.81%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFI 43
           +DGLCKVG++DEA +L+   EE G +P+VVT+  + +GF  I
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMI 792

[Close]

BLAST of CSPI03G30630 vs. TAIR 10
Match: AT1G63330.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06
Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60
           ++G+CK G+ D+  +L       G+KP+VVT+NT+ +G      LC      K +L++A+
Sbjct: 437 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG------LC-----SKRLLQEAY 492

Query: 61  QLFKKMK 68
            L KKMK
Sbjct: 497 ALLKKMK 492

[Close]

BLAST of CSPI03G30630 vs. TAIR 10
Match: AT1G62590.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06
Identity = 25/67 (37.31%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60
           ++G+CK G+ D+  +L       G+KP+VVT+NT+ +G      LC      K +L++A+
Sbjct: 512 IEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG------LC-----SKRLLQEAY 567

Query: 61  QLFKKMK 68
            L KKMK
Sbjct: 572 ALLKKMK 567

[Close]

BLAST of CSPI03G30630 vs. TAIR 10
Match: AT3G16710.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06
Identity = 24/67 (35.82%), Postives = 39/67 (58.21%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGFTFIRALCRTSLKEKDVLEDAH 60
           + G+CK+G+ ++A +L       G+KP+V+T+ T+ +GF      CR  L     + +A 
Sbjct: 440 IQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGF------CRRGL-----IHEAD 495

Query: 61  QLFKKMK 68
            LFKKMK
Sbjct: 500 SLFKKMK 495

[Close]

BLAST of CSPI03G30630 vs. TAIR 10
Match: AT5G55840.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 1.1e-06
Identity = 21/39 (53.85%), Postives = 29/39 (74.36%), Query Frame = 0


Query: 1   MDGLCKVGRSDEAMELLNEAEENGLKPSVVTFNTLFNGF 40
           +DGLCK G  DEA+ LLNE  ++G+ P +VT++ L NGF
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGF 488

The following BLAST results are available for this feature:

BLAST of CSPI03G30630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9X9	7.1e-06	50.00	Pentatricopeptide repeat-containing protein At1g06710, mitochondrial OS=Arabidop...	[more]
Q76C99	7.1e-06	41.18	Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica OX=39946 GN=Rf1 PE=2 SV...	[more]
Q9C8T7	1.6e-05	37.31	Pentatricopeptide repeat-containing protein At1g63330 OS=Arabidopsis thaliana OX...	[more]
Q9LUR2	1.6e-05	35.82	Putative pentatricopeptide repeat-containing protein At3g16710, mitochondrial OS...	[more]
Q9LVQ5	1.6e-05	53.85	Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana OX...	[more]

BLAST of CSPI03G30630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LF40	1.7e-26	98.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G728080 PE=4 SV=1	[more]
A0A6J1DW66	2.4e-17	45.04	pentatricopeptide repeat-containing protein At1g09900-like OS=Momordica charanti...	[more]
A0A6J1F9P1	3.5e-16	42.75	pentatricopeptide repeat-containing protein At1g09900-like OS=Cucurbita moschata...	[more]
A0A6J1J506	1.0e-15	42.75	pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like OS=Cuc...	[more]
A0A2I4EIR4	4.0e-12	38.17	pentatricopeptide repeat-containing protein At1g13040, mitochondrial-like OS=Jug...	[more]

BLAST of CSPI03G30630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650970.1	1.0e-30	98.55	hypothetical protein Csa_000996 [Cucumis sativus]	[more]
XP_022157329.1	5.1e-17	45.04	pentatricopeptide repeat-containing protein At1g09900-like [Momordica charantia]	[more]
XP_023528121.1	3.3e-16	43.51	pentatricopeptide repeat-containing protein At5g39710-like [Cucurbita pepo subsp...	[more]
KAG7017186.1	3.3e-16	43.51	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]
KAG6580429.1	7.3e-16	42.75	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of CSPI03G30630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06710.1	5.1e-07	50.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G63330.1	1.1e-06	37.31	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G62590.1	1.1e-06	37.31	pentatricopeptide (PPR) repeat-containing protein	[more]
AT3G16710.1	1.1e-06	35.82	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G55840.1	1.1e-06	53.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 1..29 e-value: 5.2E-7 score: 27.4
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 1..39 e-value: 1.3E-11 score: 44.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 1..27 score: 10.314641
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..69 e-value: 3.2E-13 score: 51.4
None	No IPR available	PANTHER	PTHR47942:SF36	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..39
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 1..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G30630.1	CSPI03G30630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding