CSPI03G30600 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G30600
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ty3/gypsy retrotransposon protein
Location	Chr3: 28001308 .. 28002585 (+)
RNA-Seq Expression	CSPI03G30600
Synteny	CSPI03G30600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAGATGATGAAATTAGCCCTGAAGATTGAAAATAGAGAGATGGTTCGACGGGAATGTGAGCTAAGTAGTTTGTTTGGAGGGGGAATGTGGGCTAAGTTTGTTCGGAGGGAATCAACAATTCAAACAAAATTATGTGAAGCCAACCTTGATTGTAACAAACAATAAGAAACAAACGGAAGGAAGCTGGCCGATGAGAATGATTACGTTAAAAGGGGTGACAACAGAGGAAAAGAGGAAGGAAGGTCCGACCAAACGTCTGTTCGACGTCGGATTTCAAGCATGGAGGGAAAAGAGATTGTGTTTTCGATGTGAGGAGAAGTATCACGCGGGACACATATGTAAGGTGAAGGAACAAAAGGAATTGCGGATGCTAGTGGTGAGGGAAAATGGAGAAGAACTGGAAATTATTGAGGAATTCTTTGACGCGGAAACAGAGGCCCAGACCATCGAAATAGGAAAAGTGGAGAATCTGAATATAGAGCTGTCCATTAATTCAATTGTGGGGCTATCCAATCTAGGAACAATGAAAGTAAAATGGAAGATCAAAGAGACCGAAGTGGTAGTACTCATTGACTGTGGAGCTACCCACAATTTTATTGAAGAGAATTTGGTAACAACCCTTAGCCTACTAGTGACAGAAACATCCAACTATGGGGTGATTTTGGGATCAGGGGCTGCGGTCAAAGGAAAGGGAATATGCGACAATGTGGAAGTAAGGGTAGGAGAATGGAATGTTGTAGATAGCTTTTTACCCTTGGAAATAGGGGAGTTGATGTACTATTGGGTATGCAGTGGTTGCACTCATTGGGAGTGACTGGAAAAATTTAGTGATGAGATTCCAACATGGTGGGAGGAAGATAGTGATAAAGGGGGATCCTAGCTCACCGAAACTAGAGTGAGCTTAAAGTCTATGATGAAGACATGGGGAGTTGGTGATCATGGATATTTAGTGGAATGTCGGGCGATAGAAGGAAGGGTAGCCGTGGAAGATTTAGATGATGAAGACGTGCTAGCCATTGTTATGATCTCCCCTCTGTTGAACAAATTTAGTGATGTGTCTGATTGACCGGAAGAACTACCTTCAAAAAGGGACATTGAACACCATATATACCTTAAAAAGGGAGTGGATCTCGTTAATGCCAGACCTTATCGTTACGCTCACCACCAAAAGGAAGAAATAGAAAAACTAGTTGATTAAATGCTAAAAACAGACATCATAAGGCCAAGTACCATTCCGTATTCTAGCCCAGTACTTCTCGTGAAAAAGAAAGACGAC

mRNA sequence

CCCAGATGATGAAATTAGCCCTGAAGATTGAAAATAGAGAGATGGTTCGACGGGAATGTGAGCTAAGTAGTTTGTTTGGAGGGGGAATGTGGGCTAAGTTTGTTCGGAGGGAATCAACAATTCAAACAAAATTATGTGAAGCCAACCTTGATTGTAACAAACAATAAGAAACAAACGGAAGGAAGCTGGCCGATGAGAATGATTACGTTAAAAGGGGTGACAACAGAGGAAAAGAGGAAGGAAGGTCCGACCAAACGTCTGTTCGACGTCGGATTTCAAGCATGGAGGGAAAAGAGATTGTGTTTTCGATGTGAGGAGAAGTATCACGCGGGACACATATGTAAGGTGAAGGAACAAAAGGAATTGCGGATGCTAGTGGTGAGGGAAAATGGAGAAGAACTGGAAATTATTGAGGAATTCTTTGACGCGGAAACAGAGGCCCAGACCATCGAAATAGGAAAAGTGGAGAATCTGAATATAGAGCTGTCCATTAATTCAATTGTGGGGCTATCCAATCTAGGAACAATGAAAGTAAAATGGAAGATCAAAGAGACCGAAGTGGTAGTACTCATTGACTGTGGAGCTACCCACAATTTTATTGAAGAGAATTTGGTAACAACCCTTAGCCTACTAGTGACAGAAACATCCAACTATGGGGTGATTTTGGGATCAGGGGCTGCGGTCAAAGGAAAGGGAATATGCGACAATGTGGAAGTAAGGGTAGGAGAATGGAATGTTGTAGATAGCTTTTTACCCTTGGAAATAGGGGAGTTGATGTACTATTGGGTATGCAGTGGTTGCACTCATTGGGAGTGACTGGAAAAATTTAGTGATGAGATTCCAACATGGTGGGAGGAAGATAGTGATAAAGGGGGATCCTAGCTCACCGAAACTAGAGTGAGCTTAAAGTCTATGATGAAGACATGGGGAGTTGGTGATCATGGATATTTAGTGGAATGTCGGGCGATAGAAGGAAGGGTAGCCGTGGAAGATTTAGATGATGAAGACGTGCTAGCCATTGTTATGATCTCCCCTCTGTTGAACAAATTTAGTGATGTGTCTGATTGACCGGAAGAACTACCTTCAAAAAGGGACATTGAACACCATATATACCTTAAAAAGGGAGTGGATCTCGTTAATGCCAGACCTTATCGTTACGCTCACCACCAAAAGGAAGAAATAGAAAAACTAGTTGATTAAATGCTAAAAACAGACATCATAAGGCCAAGTACCATTCCGTATTCTAGCCCAGTACTTCTCGTGAAAAAGAAAGACGAC

Coding sequence (CDS)

ATGAGAATGATTACGTTAAAAGGGGTGACAACAGAGGAAAAGAGGAAGGAAGGTCCGACCAAACGTCTGTTCGACGTCGGATTTCAAGCATGGAGGGAAAAGAGATTGTGTTTTCGATGTGAGGAGAAGTATCACGCGGGACACATATGTAAGGTGAAGGAACAAAAGGAATTGCGGATGCTAGTGGTGAGGGAAAATGGAGAAGAACTGGAAATTATTGAGGAATTCTTTGACGCGGAAACAGAGGCCCAGACCATCGAAATAGGAAAAGTGGAGAATCTGAATATAGAGCTGTCCATTAATTCAATTGTGGGGCTATCCAATCTAGGAACAATGAAAGTAAAATGGAAGATCAAAGAGACCGAAGTGGTAGTACTCATTGACTGTGGAGCTACCCACAATTTTATTGAAGAGAATTTGGTAACAACCCTTAGCCTACTAGTGACAGAAACATCCAACTATGGGGTGATTTTGGGATCAGGGGCTGCGGTCAAAGGAAAGGGAATATGCGACAATGTGGAAGTAAGGGTAGGAGAATGGAATGTTGTAGATAGCTTTTTACCCTTGGAAATAGGGGAGTTGATGTACTATTGGGTATGCAGTGGTTGCACTCATTGGGAGTGA

Protein sequence

MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRMLVVRENGEELEIIEEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIKETEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGEWNVVDSFLPLEIGELMYYWVCSGCTHWE*

Homology

[Close]

BLAST of CSPI03G30600 vs. ExPASy TrEMBL
Match: A0A5A7TWF5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00310 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 1.0e-66
Identity = 134/193 (69.43%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR ITL+ V T + R+EGPTK+L D  FQA REK LCFRC EKY AGH CK KE KELRM
Sbjct: 361 MRTITLREVATGDNRREGPTKQLSDAEFQARREKGLCFRCGEKYFAGHRCKSKEHKELRM 420

Query: 61  LVVRENGEELEII-EEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIK 120
           LVV+E GEELEI+ EEFFDAETE + +E+  VENLNIELSINS+VGL+N GTMKVK ++ 
Sbjct: 421 LVVKEGGEELEIVEEEFFDAETEMKQVEVQNVENLNIELSINSVVGLNNPGTMKVKGRVG 480

Query: 121 ETEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGE 180
           E EVV+LIDCGATHNF+ E+LVT L L + ET NYGVILGSG AVKGKG+C NVEV++  
Sbjct: 481 EEEVVILIDCGATHNFVAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGVCRNVEVQLDG 540

Query: 181 WNVVDSFLPLEIG 193
           W V DSFLPL++G
Sbjct: 541 WQVTDSFLPLQLG 553

[Close]

BLAST of CSPI03G30600 vs. ExPASy TrEMBL
Match: A0A5D3BBV5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001450 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.3e-66
Identity = 136/193 (70.47%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR ITL+ V T + R+EGPTKRL D  FQA REK LCFRC EKY AGH CK KE KELRM
Sbjct: 304 MRTITLREVGTGDNRREGPTKRLSDAEFQARREKGLCFRCGEKYFAGHRCKSKEHKELRM 363

Query: 61  LVVRENGEELEII-EEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIK 120
           LVV+E GEELEI+ EEFFDAETE + +E+  VENLNIELSINS+VGL+N GTMKVK K+ 
Sbjct: 364 LVVKEGGEELEIVEEEFFDAETEMKPVEVQNVENLNIELSINSVVGLNNPGTMKVKGKVG 423

Query: 121 ETEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGE 180
           E EVV+LIDCGATHNFI E+LVT L L + ET NYGVILGSG AVKGKG+C +VEV++  
Sbjct: 424 EEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLDG 483

Query: 181 WNVVDSFLPLEIG 193
           W V DSFLPL++G
Sbjct: 484 WKVTDSFLPLQLG 496

[Close]

BLAST of CSPI03G30600 vs. ExPASy TrEMBL
Match: A0A5A7U1D6 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001050 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.3e-66
Identity = 136/193 (70.47%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR ITL+ V T + R+EGPTKRL D  FQA REK LCFRC EKY AGH CK KE KELRM
Sbjct: 304 MRTITLREVGTGDNRREGPTKRLSDAEFQARREKGLCFRCGEKYFAGHRCKSKEHKELRM 363

Query: 61  LVVRENGEELEII-EEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIK 120
           LVV+E GEELEI+ EEFFDAETE + +E+  VENLNIELSINS+VGL+N GTMKVK K+ 
Sbjct: 364 LVVKEGGEELEIVEEEFFDAETEMKPVEVQNVENLNIELSINSVVGLNNPGTMKVKGKVG 423

Query: 121 ETEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGE 180
           E EVV+LIDCGATHNFI E+LVT L L + ET NYGVILGSG AVKGKG+C +VEV++  
Sbjct: 424 EEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLDG 483

Query: 181 WNVVDSFLPLEIG 193
           W V DSFLPL++G
Sbjct: 484 WKVTDSFLPLQLG 496

[Close]

BLAST of CSPI03G30600 vs. ExPASy TrEMBL
Match: A0A5D3BRX1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00150 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.2e-66
Identity = 133/192 (69.27%), Postives = 154/192 (80.21%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR ITL+ V T + R+EGPTKRL D  FQA REK LCFRC EKY AGH CK KE KELRM
Sbjct: 275 MRTITLREVATGDNRREGPTKRLSDAEFQARREKGLCFRCGEKYFAGHRCKSKEHKELRM 334

Query: 61  LVVRENGEELEIIEEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIKE 120
           LVV+E GEELEI+EEFFDAETE + +E+  VENLNIELS+NS+VGL+N GTMKVK ++ E
Sbjct: 335 LVVKEGGEELEIVEEFFDAETEMKQVEVQNVENLNIELSLNSVVGLTNPGTMKVKGRVGE 394

Query: 121 TEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGEW 180
            EVV+LIDCGATHNFI ENLVT L L + ET  YGVILGS  AVKGKG+C +VEV++  W
Sbjct: 395 EEVVILIDCGATHNFIAENLVTRLGLTLQETPIYGVILGSETAVKGKGVCRDVEVQLEGW 454

Query: 181 NVVDSFLPLEIG 193
            V DSFLPL++G
Sbjct: 455 QVTDSFLPLQLG 466

[Close]

BLAST of CSPI03G30600 vs. ExPASy TrEMBL
Match: A0A5A7V723 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00260 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.2e-66
Identity = 133/193 (68.91%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR +TL+G TT + R+EGP+KRL D  FQA REK LCF+C EKYHAGH CK KE KELRM
Sbjct: 274 MRTVTLRGATTADNRREGPSKRLTDAEFQARREKGLCFKCGEKYHAGHRCKTKENKELRM 333

Query: 61  LVVRENGEELEIIEEFFDAE-TEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIK 120
           LV+ ENGEE EIIEE  + E  +   IE+G V+NLNIELSINS+VGL+N GTMKVK K+K
Sbjct: 334 LVMWENGEEFEIIEEDGEEEVADENVIEVGAVKNLNIELSINSVVGLTNPGTMKVKGKVK 393

Query: 121 ETEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGE 180
           + +VVVLIDCGATHNFI E LVT L+L +  T+NYGVILGSGAA+KGKGIC  VEV +G+
Sbjct: 394 DEQVVVLIDCGATHNFISEKLVTNLNLPLKATTNYGVILGSGAAIKGKGICGKVEVLLGD 453

Query: 181 WNVVDSFLPLEIG 193
           W VVDSFLPLE+G
Sbjct: 454 WKVVDSFLPLELG 466

[Close]

BLAST of CSPI03G30600 vs. NCBI nr
Match: KAA0047238.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 263.1 bits (671), Expect = 2.1e-66
Identity = 134/193 (69.43%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR ITL+ V T + R+EGPTK+L D  FQA REK LCFRC EKY AGH CK KE KELRM
Sbjct: 361 MRTITLREVATGDNRREGPTKQLSDAEFQARREKGLCFRCGEKYFAGHRCKSKEHKELRM 420

Query: 61  LVVRENGEELEII-EEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIK 120
           LVV+E GEELEI+ EEFFDAETE + +E+  VENLNIELSINS+VGL+N GTMKVK ++ 
Sbjct: 421 LVVKEGGEELEIVEEEFFDAETEMKQVEVQNVENLNIELSINSVVGLNNPGTMKVKGRVG 480

Query: 121 ETEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGE 180
           E EVV+LIDCGATHNF+ E+LVT L L + ET NYGVILGSG AVKGKG+C NVEV++  
Sbjct: 481 EEEVVILIDCGATHNFVAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGVCRNVEVQLDG 540

Query: 181 WNVVDSFLPLEIG 193
           W V DSFLPL++G
Sbjct: 541 WQVTDSFLPLQLG 553

[Close]

BLAST of CSPI03G30600 vs. NCBI nr
Match: TYJ96499.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 262.7 bits (670), Expect = 2.7e-66
Identity = 136/193 (70.47%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR ITL+ V T + R+EGPTKRL D  FQA REK LCFRC EKY AGH CK KE KELRM
Sbjct: 304 MRTITLREVGTGDNRREGPTKRLSDAEFQARREKGLCFRCGEKYFAGHRCKSKEHKELRM 363

Query: 61  LVVRENGEELEII-EEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIK 120
           LVV+E GEELEI+ EEFFDAETE + +E+  VENLNIELSINS+VGL+N GTMKVK K+ 
Sbjct: 364 LVVKEGGEELEIVEEEFFDAETEMKPVEVQNVENLNIELSINSVVGLNNPGTMKVKGKVG 423

Query: 121 ETEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGE 180
           E EVV+LIDCGATHNFI E+LVT L L + ET NYGVILGSG AVKGKG+C +VEV++  
Sbjct: 424 EEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLDG 483

Query: 181 WNVVDSFLPLEIG 193
           W V DSFLPL++G
Sbjct: 484 WKVTDSFLPLQLG 496

[Close]

BLAST of CSPI03G30600 vs. NCBI nr
Match: KAA0048037.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 262.7 bits (670), Expect = 2.7e-66
Identity = 136/193 (70.47%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR ITL+ V T + R+EGPTKRL D  FQA REK LCFRC EKY AGH CK KE KELRM
Sbjct: 304 MRTITLREVGTGDNRREGPTKRLSDAEFQARREKGLCFRCGEKYFAGHRCKSKEHKELRM 363

Query: 61  LVVRENGEELEII-EEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIK 120
           LVV+E GEELEI+ EEFFDAETE + +E+  VENLNIELSINS+VGL+N GTMKVK K+ 
Sbjct: 364 LVVKEGGEELEIVEEEFFDAETEMKPVEVQNVENLNIELSINSVVGLNNPGTMKVKGKVG 423

Query: 121 ETEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGE 180
           E EVV+LIDCGATHNFI E+LVT L L + ET NYGVILGSG AVKGKG+C +VEV++  
Sbjct: 424 EEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLDG 483

Query: 181 WNVVDSFLPLEIG 193
           W V DSFLPL++G
Sbjct: 484 WKVTDSFLPLQLG 496

[Close]

BLAST of CSPI03G30600 vs. NCBI nr
Match: TYK02491.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 261.9 bits (668), Expect = 4.6e-66
Identity = 133/192 (69.27%), Postives = 154/192 (80.21%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR ITL+ V T + R+EGPTKRL D  FQA REK LCFRC EKY AGH CK KE KELRM
Sbjct: 275 MRTITLREVATGDNRREGPTKRLSDAEFQARREKGLCFRCGEKYFAGHRCKSKEHKELRM 334

Query: 61  LVVRENGEELEIIEEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIKE 120
           LVV+E GEELEI+EEFFDAETE + +E+  VENLNIELS+NS+VGL+N GTMKVK ++ E
Sbjct: 335 LVVKEGGEELEIVEEFFDAETEMKQVEVQNVENLNIELSLNSVVGLTNPGTMKVKGRVGE 394

Query: 121 TEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGEW 180
            EVV+LIDCGATHNFI ENLVT L L + ET  YGVILGS  AVKGKG+C +VEV++  W
Sbjct: 395 EEVVILIDCGATHNFIAENLVTRLGLTLQETPIYGVILGSETAVKGKGVCRDVEVQLEGW 454

Query: 181 NVVDSFLPLEIG 193
            V DSFLPL++G
Sbjct: 455 QVTDSFLPLQLG 466

[Close]

BLAST of CSPI03G30600 vs. NCBI nr
Match: KAA0062226.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 261.9 bits (668), Expect = 4.6e-66
Identity = 133/193 (68.91%), Postives = 156/193 (80.83%), Query Frame = 0


Query: 1   MRMITLKGVTTEEKRKEGPTKRLFDVGFQAWREKRLCFRCEEKYHAGHICKVKEQKELRM 60
           MR +TL+G TT + R+EGP+KRL D  FQA REK LCF+C EKYHAGH CK KE KELRM
Sbjct: 274 MRTVTLRGATTADNRREGPSKRLTDAEFQARREKGLCFKCGEKYHAGHRCKTKENKELRM 333

Query: 61  LVVRENGEELEIIEEFFDAE-TEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIK 120
           LV+ ENGEE EIIEE  + E  +   IE+G V+NLNIELSINS+VGL+N GTMKVK K+K
Sbjct: 334 LVMWENGEEFEIIEEDGEEEVADENVIEVGAVKNLNIELSINSVVGLTNPGTMKVKGKVK 393

Query: 121 ETEVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGE 180
           + +VVVLIDCGATHNFI E LVT L+L +  T+NYGVILGSGAA+KGKGIC  VEV +G+
Sbjct: 394 DEQVVVLIDCGATHNFISEKLVTNLNLPLKATTNYGVILGSGAAIKGKGICGKVEVLLGD 453

Query: 181 WNVVDSFLPLEIG 193
           W VVDSFLPLE+G
Sbjct: 454 WKVVDSFLPLELG 466

[Close]

BLAST of CSPI03G30600 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 40/134 (29.85%), Postives = 66/134 (49.25%), Query Frame = 0


Query: 72  IIEEFFDAETEAQTIEIGKVENLNIELSINSIVGLSNLGTMKVKWKIKETEVVVLIDCGA 131
           +I E  + E ++ T+  G +E L I+L+ N          M+    I + +VVV ID GA
Sbjct: 93  VINELEELEQDSYTLRQG-MEQLVIDLTRNK--------GMRFYGFILDHKVVVAIDSGA 152

Query: 132 THNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGEWNVVDSFLPLEI 191
           T NFI   L  +L L  + T+   V+LG    ++  G C  + + V E  + ++FL L++
Sbjct: 153 TDNFILVELAFSLKLPTSITNQASVLLGQRQCIQSVGTCLGIRLWVQEVEITENFLLLDL 212

Query: 192 GE------LMYYWV 200
            +      L Y W+
Sbjct: 213 AKTDVDVILGYEWL 217

[Close]

BLAST of CSPI03G30600 vs. TAIR 10
Match: AT3G30770.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 48.9 bits (115), Expect = 5.7e-06
Identity = 25/70 (35.71%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 122 EVVVLIDCGATHNFIEENLVTTLSLLVTETSNYGVILGSGAAVKGKGICDNVEVRVGEWN 181
           +VVV+ID GAT+NFI + L   L L  + T+   V+LG    ++  G C  + + V E  
Sbjct: 294 KVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCFGINLLVQEVE 353

Query: 182 VVDSFLPLEI 192
           + ++FL L++
Sbjct: 354 INENFLLLDL 363

The following BLAST results are available for this feature:

BLAST of CSPI03G30600 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G30600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWF5	1.0e-66	69.43	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BBV5	1.3e-66	70.47	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7U1D6	1.3e-66	70.47	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BRX1	2.2e-66	69.27	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V723	2.2e-66	68.91	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of CSPI03G30600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0047238.1	2.1e-66	69.43	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYJ96499.1	2.7e-66	70.47	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048037.1	2.7e-66	70.47	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK02491.1	4.6e-66	69.27	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0062226.1	4.6e-66	68.91	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI03G30600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29750.1	2.0e-06	29.85	Eukaryotic aspartyl protease family protein	[more]
AT3G30770.1	5.7e-06	35.71	Eukaryotic aspartyl protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 118..193 e-value: 7.4E-7 score: 29.0
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 13..192
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 13..192
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 114..192 e-value: 2.31825E-10 score: 53.4944
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 101..195 e-value: 5.1E-10 score: 41.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G30600.1	CSPI03G30600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006488	dolichol-linked oligosaccharide biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding