CSPI03G29960 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTATGAAGTTGATGATGAATGAGTACAAAGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTTTATGTCTTTGAAGGATGTCAAACTTTTTCCGAGGTTGAGTCTTCATTTGCCTCCTCCAACACTAATGATCATCACCACCACTTTCTTATGTCTTCATCTCTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAACTGTTCCCAAGAGTTTGATGGTGAGAACTGTTCTTGGTCATGTGAGGAGTTGATGCCAATTAATCGCAACAAAAAGGTCAGTTTATAAAAGTACTTGCCTTGTTCTTGAATTTCATTCCAAAAAGTTGTGTATTGATAAAATTGATCTTTTTTTTTTCCTTTAGCTTAACTACTACTTACTATGTTCTTATACTTTTAGCTTGGATTGATTTAGCCCATGTACCTACAAATATTGAAAGGAATGTACTAAAATAGTCACTTTTCAAAAGTGAAAGATGTACTCTTAGTTTTAGTTCATTTTAATTTTTGTACTTTCAAGATGTCAATTTTGGTTTATGTGCCTTGAAAAGTGACCATTTTTGTTCTACTTTGCAAAATTTAGAGGAAAAGTAAGATGGAAATAAAAATAAATTGGCTAAAATGTCTTTCAAAAGTACAGAGAGAGAAGTAAGGGTAAGAGTACTAAAACCAACTGAAGTAGTATTTAAACAGTTTTTTTTTTCTTTTTTTTTTTTGTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTGTTCTTGTTCCCGTGCAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACGGAAGAGCTTCACCAAAAGTTCACCAATTGCGTCGATCAGCTCGGAGGCGCACAAAGTAAGTAACGTATATTGTAAACGATCAAAGATGTTATGGCCATCTGAGAATTAGTAACTCAGTGTTTGTTGCAAGTGCAGAAGCCACACCAAAGCAACTCTTTCACTTAATGAAAACTAAAGGATTGACTCTCATCCATATAAAAAGCCACTTACAGGTTTGCGTTTGCTATGCAGTAAAAGTTAATAACATTTCACTCTCGGTTTGTCATTCTTTTGATTTGGTTTTTGATCAAATCCTTTTTTCCTTTTCAGAAATATCGCATTTCCCAGCAGATTCAAGAACTTTCAAAAGGTGTATATTCTTGTTCTAATCCTAAACTCTATCAAACTAGAAATGTAAACTTAACTAAAACTCTCAACAAAACCAATCAAATACTGATGTGTTTTGTGAAGCAGGAAAATCTGAGAGACAAATTAACAAGAAAGAAACGATGCAGGGTAGCCAAAACATGTAAGTTTGTGTATCTGGTTTGCATTTACATTAATCACAATAAGAAAATGTTACAAACTTTGATTAATTTCCAAGCAGAGGGAAACAGTTGATGGAAGTAGTGAGACAACAACTTCATGCTCAGAGTAGTTTGAATGAACAATTGAAGGTTTGATAATTCCATCTTAGAAATTATTGATTGTAATGCTCTTTTTTCAGTGAAGTGTCCTGTTTTCCTAAATTCTAAATAAATAAATAAAAATTGAGGGCATCATTTTTATCTATGCAAGAGGGCACTTGAGCCAAGAAGTAGAGTTGTGAACCCAAGGAGTACTGTGAAGCCTCAGTGAGTTATGAATGCTTGAGACATGCTTGTCAAGATATAAACTTGATATTACTTAGTCTTGAGACTCATAAACACTACTCAAGGAATAAGTGAGTTCATGAACTCTTTGACCAACTTCTTGGACCAAACACCTGCTAAAGTTAATTGAGTCAATTTTAACTTCAAAGTGTATTTAACCCACAAATTTAGAAAGCTTGTAATTATCATTTAGGGTTGTTTTGGTTTGTTAGGGGTTTAGATTAGATTGTGTGAAGAAATGAGTTTGGAGTTTTAGAAGCCAAGATTTATGTTTAGCTTATGTCTAGTTTATAGGTTTAAAATTCATAAAAGGTTGTAAATAATTTAAGAGGTAGGTTCACATGTTAAAGTTTACAAAATATAGATTTCATGTTATGTATCCTTAACCATGTAAGTATTTTAGGAGACAAATCCTAATCCTACCATATGTAGCTATCGTGGAAACTATCTAGATATTAAATCCTATTTATGGTCATTATAGTTAGAGAACTAATTTCACTTGATATGTTTTATGAAACTGAAACTAACAAATAGAATTAGCAATTTAAAACTCAAAGCAAAACAGAGTACAATAGTCTAAGGTGATTGCAGCATTCCTAATTCATGCCCTATTCCGTGAGTCTCGTCTTTTTAAGGCGAGCCAGAGGACTTTTTAAAATATTGCTTAGGATAACTGAACTTGTACATGCAAAGACATTTGAAAGTTCTAGTTTCATCTGATTCGTCCTTGGACATAAAAATAACATTGAGGTTTAGGATATACTACCGTTGATTGTTGCTTTTTGGGTACAGGTTCAGAAGAAATTGATCTCGGCCATTGAAGAACAAATGAAGCAACTGAGAGGAAACCTATTGTGTTTAGAAAAGACTAAGGGAGAATAAAATGGACTTCTCTTTGATCAGAAAAGTGTGTTCAGTTCCT CTATGAAGTTGATGATGAATGAGTACAAAGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTTTATGTCTTTGAAGGATGTCAAACTTTTTCCGAGGTTGAGTCTTCATTTGCCTCCTCCAACACTAATGATCATCACCACCACTTTCTTATGTCTTCATCTCTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAACTGTTCCCAAGAGTTTGATGGTGAGAACTGTTCTTGGTCATGTGAGGAGTTGATGCCAATTAATCGCAACAAAAAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACGGAAGAGCTTCACCAAAAGTTCACCAATTGCGTCGATCAGCTCGGAGGCGCACAAAAAGCCACACCAAAGCAACTCTTTCACTTAATGAAAACTAAAGGATTGACTCTCATCCATATAAAAAGCCACTTACAGAAATATCGCATTTCCCAGCAGATTCAAGAACTTTCAAAAGGAAAATCTGAGAGACAAATTAACAAGAAAGAAACGATGCAGGGTAGCCAAAACATAGGGAAACAGTTGATGGAAGTAGTGAGACAACAACTTCATGCTCAGAGTAGTTTGAATGAACAATTGAAGGTTCAGAAGAAATTGATCTCGGCCATTGAAGAACAAATGAAGCAACTGAGAGGAAACCTATTGTGTTTAGAAAAGACTAAGGGAGAATAAAATGGACTTCTCTTTGATCAGAAAAGTGTGTTCAGTTCCT ATGAAGTTGATGATGAATGAGTACAAAGAGTTTTGTCCACTCTCCTATTTGGATTCCCCATTTCATGATTTTTATGTCTTTGAAGGATGTCAAACTTTTTCCGAGGTTGAGTCTTCATTTGCCTCCTCCAACACTAATGATCATCACCACCACTTTCTTATGTCTTCATCTCTTCATTCACCAAATCCTCAAGAAGCTCAACATCAATCAAACTGTTCCCAAGAGTTTGATGGTGAGAACTGTTCTTGGTCATGTGAGGAGTTGATGCCAATTAATCGCAACAAAAAGTTAAAATCAAGTATCGTTTCTAAGACACGAATTAAATGGACGGAAGAGCTTCACCAAAAGTTCACCAATTGCGTCGATCAGCTCGGAGGCGCACAAAAAGCCACACCAAAGCAACTCTTTCACTTAATGAAAACTAAAGGATTGACTCTCATCCATATAAAAAGCCACTTACAGAAATATCGCATTTCCCAGCAGATTCAAGAACTTTCAAAAGGAAAATCTGAGAGACAAATTAACAAGAAAGAAACGATGCAGGGTAGCCAAAACATAGGGAAACAGTTGATGGAAGTAGTGAGACAACAACTTCATGCTCAGAGTAGTTTGAATGAACAATTGAAGGTTCAGAAGAAATTGATCTCGGCCATTGAAGAACAAATGAAGCAACTGAGAGGAAACCTATTGTGTTTAGAAAAGACTAAGGGAGAATAA MKLMMNEYKEFCPLSYLDSPFHDFYVFEGCQTFSEVESSFASSNTNDHHHHFLMSSSLHSPNPQEAQHQSNCSQEFDGENCSWSCEELMPINRNKKLKSSIVSKTRIKWTEELHQKFTNCVDQLGGAQKATPKQLFHLMKTKGLTLIHIKSHLQKYRISQQIQELSKGKSERQINKKETMQGSQNIGKQLMEVVRQQLHAQSSLNEQLKVQKKLISAIEEQMKQLRGNLLCLEKTKGE* Homology
BLAST of CSPI03G29960 vs. ExPASy Swiss-Prot
Match: Q0WVU3 (Myb family transcription factor PHL5 OS=Arabidopsis thaliana OX=3702 GN=PHL5 PE=2 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 6.2e-25 Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 0
BLAST of CSPI03G29960 vs. ExPASy Swiss-Prot
Match: B8B5N8 (Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. indica OX=39946 GN=PHR2 PE=3 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20 Identity = 60/126 (47.62%), Postives = 83/126 (65.87%), Query Frame = 0
BLAST of CSPI03G29960 vs. ExPASy Swiss-Prot
Match: Q6Z156 (Protein PHOSPHATE STARVATION RESPONSE 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR2 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20 Identity = 60/126 (47.62%), Postives = 83/126 (65.87%), Query Frame = 0
BLAST of CSPI03G29960 vs. ExPASy Swiss-Prot
Match: A2X0Q0 (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. indica OX=39946 GN=PHR3 PE=3 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.5e-20 Identity = 59/160 (36.88%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of CSPI03G29960 vs. ExPASy Swiss-Prot
Match: Q6YXZ4 (Protein PHOSPHATE STARVATION RESPONSE 3 OS=Oryza sativa subsp. japonica OX=39947 GN=PHR3 PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.5e-20 Identity = 59/160 (36.88%), Postives = 98/160 (61.25%), Query Frame = 0
BLAST of CSPI03G29960 vs. ExPASy TrEMBL
Match: A0A5D3CJQ9 (Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00080 PE=4 SV=1) HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95 Identity = 185/211 (87.68%), Postives = 193/211 (91.47%), Query Frame = 0
BLAST of CSPI03G29960 vs. ExPASy TrEMBL
Match: A0A5A7U415 (Protein PHR1-LIKE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00100 PE=4 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 5.0e-94 Identity = 185/212 (87.26%), Postives = 193/212 (91.04%), Query Frame = 0
BLAST of CSPI03G29960 vs. ExPASy TrEMBL
Match: A0A0A0LEY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G702590 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 4.5e-79 Identity = 149/160 (93.12%), Postives = 152/160 (95.00%), Query Frame = 0
BLAST of CSPI03G29960 vs. ExPASy TrEMBL
Match: A0A6J1F3G0 (myb family transcription factor PHL5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441832 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 7.2e-69 Identity = 158/230 (68.70%), Postives = 175/230 (76.09%), Query Frame = 0
BLAST of CSPI03G29960 vs. ExPASy TrEMBL
Match: A0A6J1J569 (myb family transcription factor PHL5-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481412 PE=4 SV=1) HSP 1 Score: 256.5 bits (654), Expect = 1.1e-64 Identity = 152/218 (69.72%), Postives = 165/218 (75.69%), Query Frame = 0
BLAST of CSPI03G29960 vs. NCBI nr
Match: XP_011652834.2 (myb family transcription factor PHL5 [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 1.0e-125 Identity = 234/238 (98.32%), Postives = 236/238 (99.16%), Query Frame = 0
BLAST of CSPI03G29960 vs. NCBI nr
Match: KAE8650941.1 (hypothetical protein Csa_001106 [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 1.0e-125 Identity = 234/238 (98.32%), Postives = 236/238 (99.16%), Query Frame = 0
BLAST of CSPI03G29960 vs. NCBI nr
Match: TYK10646.1 (protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 358.6 bits (919), Expect = 4.2e-95 Identity = 185/211 (87.68%), Postives = 193/211 (91.47%), Query Frame = 0
BLAST of CSPI03G29960 vs. NCBI nr
Match: KAA0048301.1 (protein PHR1-LIKE 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 354.0 bits (907), Expect = 1.0e-93 Identity = 185/212 (87.26%), Postives = 193/212 (91.04%), Query Frame = 0
BLAST of CSPI03G29960 vs. NCBI nr
Match: XP_038904770.1 (myb family transcription factor PHL5-like isoform X2 [Benincasa hispida]) HSP 1 Score: 330.9 bits (847), Expect = 9.3e-87 Identity = 181/229 (79.04%), Postives = 195/229 (85.15%), Query Frame = 0
BLAST of CSPI03G29960 vs. TAIR 10
Match: AT5G06800.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 115.9 bits (289), Expect = 4.4e-26 Identity = 77/194 (39.69%), Postives = 111/194 (57.22%), Query Frame = 0
BLAST of CSPI03G29960 vs. TAIR 10
Match: AT5G06800.2 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 104.4 bits (259), Expect = 1.3e-22 Identity = 68/172 (39.53%), Postives = 98/172 (56.98%), Query Frame = 0
BLAST of CSPI03G29960 vs. TAIR 10
Match: AT3G04450.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20 Identity = 60/166 (36.14%), Postives = 94/166 (56.63%), Query Frame = 0
BLAST of CSPI03G29960 vs. TAIR 10
Match: AT3G04450.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 97.8 bits (242), Expect = 1.2e-20 Identity = 60/166 (36.14%), Postives = 94/166 (56.63%), Query Frame = 0
BLAST of CSPI03G29960 vs. TAIR 10
Match: AT2G01060.1 (myb-like HTH transcriptional regulator family protein ) HSP 1 Score: 93.2 bits (230), Expect = 3.0e-19 Identity = 54/130 (41.54%), Postives = 84/130 (64.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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