CSPI03G29600 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G29600
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DNA topoisomerase 2
Location	Chr3: 27144208 .. 27151229 (+)
RNA-Seq Expression	CSPI03G29600
Synteny	CSPI03G29600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTCGAAAAGAAACGGCCACTTCAGAACAGCAACGCCGCCAATGTCGACTCCAATCCGGCAGGTCCAAAGAAAACAATCGAAGAAATGTACCAAAAGAAGTCTCAGCTCGAGCACATTCTTCTCAGGCCCGATACCTATGTCGGATCTATTGAAAAGCATACCCAAAACCTCTGGGTTTACGAGAATGAAAAAATGGTCCACCGATCAATCTCTTACGTGCCTGGTCTTTACAAGATCTTTGATGAAATCTTGGTCAATGCCGCAGATAATAAGCAGAGAGACCCTTCCATGGATTCTGTCAAGGTCAATATTGATGTCGAACAGAACTGTATCAGTGTTTTCAACAATGGAGATGGAGTTCCGGTTGAAATTCATCAGGAAGAGAAGGTTTATGTGCCTGAGTTGATCTTTGGACATTTGTTGACTAGTAGTAACTACGATGATACCGAAAAGAAAACCACTGGTGGACGGAATGGGTATGGTGCGAAACTTACCAATATTTTTTCTTCTGAATTTGTGATCGAAACGGCTGATGGAAGGCGCCTGAAGAAGTATAAGCAGGTATAATTAGTGCATACTTCGTGAAGATTAAATATTTTTTCTTACTTTGTTTGGTTGCAATCAGGTAATTTATTAGATCTGTACACTGATTTGGTAAATTTATTTATCTGGTTCGAGTTTGGGAAATGACTCGAATGTTATGTTTAAGAAGGAAATGGTTAGCGATGTACCAAGTGTTTAGTAGGCTTTGAACTGATCGGGTGACAGGTTCATAATGCTGTGAACGTCTTTGTTTTTCCTTTCAAGTTTCTCTTCTATTTGTGCTTCAAGAACTGTAAAGAATATATTTTTTGCAAATTCTGTTTGCTTTATCTTCTATGTTTGATTCACGCTCTTTCGCTGAGCCTCATTTGAAAAATTACTCTTTCCATGTCATTTCACCATCTCATGAATGTAACTTTCTGTTCCCATATAAGATTTTTTATATTTTAGAGGTTAGCTTTCTTTTCGTATGACAATCTAATATGTTCTTTTAGCCAGAGCTGGAAACTAACTAATGTGTTTATTTTGCATATGAAAGGTATTCAATGATAACATGGGTAAAAAATCAGAGCCGATTATAACAAAGTGCAAGGATGGTGACAATTGGACCAGAGTAACTTTTAAACCAGACCTGGAAAAATTTAACATGACCCATCTTGAAGATGATGTTGTTGCACTGATGAAAAAGAGAGTCTTGGATTTGGCTGGATGCCTTGGTAAAACCGTGAAGGTTGAGCTGAATGGACAAAGGGTCCCTGTAAGATCATTTCAAGATTATGTAGATCTCTACCTCAAATCAGCATCCTCAATCCAGGCGGAACCTCCCAAAAGGTAGAGGCTGGTGAAACTTTTGTTTGCAAAAATTCAGAGTTTATATTGCGTTTTGAGGATATGGTAAAGGGTTTGTGAATCTTGTTTAGGTATCACATTAGGCCTAATGAGAGATGGGAAATTGTGGTGACCTTAAGTGAGGGCCAGTTCCAACAGGTATCTATCTTTTAAATGAATGTGTTTAATGCAACTACTGGATATTTGAAGTTTTTAAAGTTAGTAACTGTGTTTTATTGAACAGGTCAGCTTTGTGAACGGGATTGCAACAATCAAGGGTGGGACTCATGTTGAATACATCACTAATCAAATAGCAAATTTTGTGATGACTGCTGTAAATAAGAAGAACAAAAATGCTAACGTGAAGGCTCATAATGTGAAGAGCTATTTGTGGGTTTTTATCAATGCTCTCATTGATAATCCATCCTTCGACTCCCAAACCAAGGAAACTTTGACAAAACGTGCAAACAGTTTCGGTTCTGCATGTGAACTTACGCCAGATTTTTTGAAGAATGGTATGCACGCATTAATCACAAACGTTATTTATAATATTGGTTTATTATTTCAAATGTAAGATACTGATTAATTGCAAATATTGCAACCAGTGGCCACAAAATCTGGAATTATGGACAGCGTTCTCTCATGGGTTAATTTCAAGCAAAGCAAAGATTTGAAGAAAACGGATGGAGCAAAAACAGAAAAGATTAGTGGTATCGAAAAGTTGGAGGACGCCAATTGTGCTGGAGGGAAGAACTCAGAAAAATGTACCTTAATTTTGACGGAAGGAGATTCGGCTAAGGCCCTTGCAGTAAGTTCTCATTTTTCACACTTATGAATTGATGTTTGTTACTATCTCTCTCTCCCTAGATGGCTTATAACTTTGTTGCTGTGCCAATAGATGGCTGGGCTCGGTGTAGTAGGACGAGACTTTTATGGTGTATTCCCACTCAGAGGTAAATTGCTCAATGTGAGGGAAGCAAGTAGTAAACAAATCACAGAGAATAAAGAAATTCAGTACATCAAGCAAATTCTTGGACTTCAGCAAGGGAAGGAATACAACAATGCTAGGGCTTTGAGATACGGTCATTTGATGATTATGACCGATCAGGTCTGATGGCTTATGTTTTTCATGTTCATTTATGTTTTCACTTGTGTGTTATTTCTACTCGTTTCTGTCTACAACATGGGGTTAACATCAATGCCTATATATAGGACCACGATGGCTCACACATTAAAGGACTCTTGATCAACTTTATTCATTCTTTTTGGCCTTCTCTCCTAAGAGTGCCATCGTTCTTGGTTGAATTCATAACGCCAATTGTCAAGGTTGGTTATGCTTCGTTGATTGGTCCTCATTGATAAGTTTGCTAAAAGGCACTGCTTCTCACACATTCTTTTGACGTCTGCAGGCTACTCATAAGAATGGAACTGTTTTATCTTTCTATACCATGCCCGAGTACGAAGCCTGGAAAGAGAGCTTGAGGGGCAATGCAAGTGGCTGGTCAATCAAGTACTATAAGGTCGGTCTTCTAAGACTTAAGAATAGGAACTTCTTTGTGTAAGTTGTATTTCTTCAAATTACATTTGAAAGATATTAATGTTGCAATCCATTAATTTGTTATCCTAATTATGCAGGGGTTGGGAACAAGCACATCAAAAGAAGGAAGAGAGTACTTTGAACAGCTGACAAAGCACAAGAAAGATTTTATTTGGCAAGATGATAATGACGGGGAGGCCATTGAGCTTGCTTTCAGTAAGAAGAAGATTGAAGATAGAAAGAATTGGCTCCGTCAATTTGAGGTAAGAGAAGTATGATCAATTAACTACCCATGTATTAATGCCTTTGCAAGAAGTTAAATTGTCTTACTAATGTCACTCTCTTCAATAAACACATTGCAGCCTGGTACCCATCTAGATCAGACAGGAAAATTGATAAAATACAGTGACTTCGTTAACAAGGAGCTTATATTATTTTCAATGGCTGATTTACAAAGGTCTATTCCGTCAATGGTTGATGGCCTTAAGCCTGGCCAAAGGAAGATCCTTTTCTGTTCTTTCAAGAGGAACTTTATCAAAGAAGCAAAGGTTTCACAATTTTCCGGTTACGTATCTGAGCACTCTGCTTATCATCATGGTGAGCAGAGTCTTGCTAGTACCATCATTGGAATGGCACAGGACTTTGTTGGCAGTAACAACATTAATCTTCTTCTACCAAATGGACAGTTTGGCACACGGAACCATGTAGATATTTCCCTCATTTCTTTAAACATTTATGAAGTTAATTCTAGTCGTTGATTTATTCTGTGCATTTTTTCTCCAGGGAGGCAAAGATCATGCAAGTTCTAGGTACATTTACACTAAACTTTCAAATGTCACACGGTTCCTTTTCCCGAGAGATGATGACAAGCTTCTTAACTACTTAAATGAAGATGGCCAGTCGATTGAACCAACCTGGTAAATCTCTTCCTGTCTTGTGCTTCTCTTCCTTTTCACTGCCCCACTTTAGTGCGTTTTTCTTCATTCATTTTAAGAAAATTAAGTTTGCATAAGGCTTAGCGTTGTGTTTTTAATATTTTTCTTTTGTGCCTCTTAGGTATATGCCTATCATCCCAACCGTTCTTGTCAATGGAAGTGAAGGAATTGGAACTGGTTGGAGTTCATACGTTCCAAACTATAATCCTAGAGACATCATTAGAAATGTCAGACGCATGTTGGAGGGAGAAACGATGTTGCCAATGGATCCGTGGTATAGAGGTTTTTCAGGAACTATAGAGAAAACTGCCACTAAAGAAGGAGGTACTACTTACACTGTTAGTGGAATTATAGAGGAAGTCAGCGATACGACGTTGAGAATAGTTGAATTGCCAGTCCGCCGATGGACTAGTGACTACAAGGACTTTCTTGACTCTGTCACAAGAGTTGCATCAAAGCATGACAAAGATAAAGAAAAAGCAGCAAAAGATCCTTTTATTGAGGTACAGAAATGATTACATCTCAGTAAAAGCTTCTCTCTTGCATTCTTTTTTTTCACTGTGCTAAGAAATTCTTCTTTCCTTGTGATATGCAGCAAGCTGATCACCACAGCGATGACAAAATTGTTTCCATTGATGTTCACTTAACAGAGGAAAACATGTTATTGGCCATCCAGGAAGGTTTGAAGAAGAAATTCAAACTAACTACAACTGTCAGCACTAGCAACATGCACCTGTTTGATGCAAATGGCGTCATTAAGAAATATGACACCCCAGAACAAAGTATGCCGTGTTGAGATTTTTACTTAGCTTATAGTTATGCTGTTAGAGCTCTGTGATCTAATATAAAAAAAATTTAACTACTTTGCAGTTCTTGAGGAATTTTTCCCCCTTAGACTTGAATTCTACGAGAAAAGAAAGGTGAACTACTTGTATTTTTTTCCCTTATTCATCTGAAAGGTTGAGAGAGAGAGTCAATGATTTGACAAAATTGTTGACTTTTGAATGCAGAGAATTCTTTTGGATAACCTTGAAATGGAGTTGCTTAAACTGGAAAACAAGGTGAGGTTCATTCTTGCTGTTGTGAATGAAGAGATAAAAGTAAGCAATAGAAAAAAGGTTGATTTGTTCCACGAGCTTCAAGCGAAAGGCTTTACACCCTTTCCAAAGAAGACTAAATCTGTTGAGCCGGAGATTGCTGGGGCATCTAATGAAACTGATGAAGCAGAGGAGAGCCCGGAAGTGGTAAAAGGGGAACGAATTAGTGATTATGAGTATCTACTAGCTCTGCCAATTGGAACCTTGACCATCGAGAAGGTTCAGGAGCTATGTAGTGATAGAGACAAGCTGAAAGGAGAAGTGGACGATTTGAGGAAGGCAACCCCCAAGTCTTTGTGGCTGAATGACCTTGATTATCTTGAGAAAGAGCTTGATGTAAGATGAAAATAATAGTTTCTTTCACATTTCATATACTTGTTATCGGCTTTACATTTTGCTTAAGATTTTGATTGTTATACAGGAGATGGATAGAAATGATGCTCAGACAATGGAGTTAAGAAAACAACAGCGAGAGAAAGCAAATATCGATTTAAAGCCAAAAGTGTCAAGAAATGCACCAAAAGCTCCACGTAACAGTAAGAAAACCAGCAATGTGGAAACTGTCACCGAAAGTATGGACACAACATATAGTTCTACAACAACTGAAGTTGGTAGGTTCATTATTCACCCCTCTTCAGATACTCCAAATGTTTGTTTTTTGGTTTTATTTTCTTTGCATATGTTTTAAGTATTAATCTCAATGATTTTTACTTAACAGCAAATAACCCGGTGGTGAAGCCGAAAGGCAAAGCAGCTCCAAGAAAAGCTCCTGCTAAAAAGAAGGTAACATTTTGGCTCATTCATTTTAGTTGTTCTTGAGAAACTCCCACCATCAATTTGGCCCTTCCGAAATAAATTGACTTTGTTCTGCTGCGGAAACAAACTACAGGGTAAAGCAGCAGTTCTTGACGATGACGAAGATGACGAAGTCCTCGAGCTTAAAGATCGTCTTGCTGCCTATAAAATTGAGTCATCTCCTGAACCATCAGAAGGTTTAATTAATAGTACTCACTGTTGAAAATTTACTTTCAAGTTTGAACTTAAGTCCTTTATCCTGTTAGATTTAGATTTAACACTAATCCCAAAAGTTATAATGAGATGCCCTTAACAGCACTAAAGAAGATGTATGCTGTGATGATCATAACTTCTTTTTTAACTTTTCAGTTTCAGCCATGGAAACTGAAGTGCAGGAAGTACAACAACAAGCGGCCAAGAAGAAAGAACCTAGCAAGAGAGCACCTGCCAAGAAGAAAACTACTGCAAAGTCAGCTCAGATCTCCATTAGCGACGACGACAACGACGGAGATTTCGAAATAAAGGAAGTAGACCCTCCGGCAGCCAAGAAGGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAAAGGCAGCTGCAGGAAATAGCAAAACAACCAAGCCCCCTGCTGCAGGAGCGAAGTTGGGGCAGAAACTGATAACTCAAATGCTAGAACCAGCAGCAGAGAACTCCGGCATCTCACCAGAGAAGAAAGTGAGGAAGATAAGAGCATCACCTTTCAACAAGAAAAGTGGCTCTTTATTGGGAAGAACAATAGGGGAAGAAGAAGAGGATGAAAACGACGATGAAGGGAAGTTGATGGGTTCTGCTTCTTTCGAGACTAGTGAAGAAGTTCAGCTGGCGAGAGGGAGATCTCGGAGAGCAAACAGAACAACACAGGTCAGGTATGTGCTTAGTGATTCAGATGGTGAGGTAGCTTCTCAGGATTCAGACTTCGATGAAGACGAAGCCAGCCTTGATGAAGATTGACTGAAGAAATCTCCTTTGTATGTATATAGATAACTTCTTTCCGGTGAAAAAAATTAAGATCTTCCTGACTCTTATGTCTTCTATTGGTGTAACAGTATTTGCTAGAATTTAAGCGGTCAGTGTTGTTATTGGGGATCGCCATCTTATGAAGATTTGGCATTTGATGTAACTTTTCTATGTAACGTTGACATTCAGAACAAAAAAAGAACAGAATTCTACCCATACTTTGGAGGGTAAATAATATTCATTCCTATGGAAGAAAACGAAGAGTTTTGTAAAGCTGAAAAGCATAGTTTGC

mRNA sequence

ATGGTTGTCGAAAAGAAACGGCCACTTCAGAACAGCAACGCCGCCAATGTCGACTCCAATCCGGCAGGTCCAAAGAAAACAATCGAAGAAATGTACCAAAAGAAGTCTCAGCTCGAGCACATTCTTCTCAGGCCCGATACCTATGTCGGATCTATTGAAAAGCATACCCAAAACCTCTGGGTTTACGAGAATGAAAAAATGGTCCACCGATCAATCTCTTACGTGCCTGGTCTTTACAAGATCTTTGATGAAATCTTGGTCAATGCCGCAGATAATAAGCAGAGAGACCCTTCCATGGATTCTGTCAAGGTCAATATTGATGTCGAACAGAACTGTATCAGTGTTTTCAACAATGGAGATGGAGTTCCGGTTGAAATTCATCAGGAAGAGAAGGTTTATGTGCCTGAGTTGATCTTTGGACATTTGTTGACTAGTAGTAACTACGATGATACCGAAAAGAAAACCACTGGTGGACGGAATGGGTATGGTGCGAAACTTACCAATATTTTTTCTTCTGAATTTGTGATCGAAACGGCTGATGGAAGGCGCCTGAAGAAGTATAAGCAGGTATTCAATGATAACATGGGTAAAAAATCAGAGCCGATTATAACAAAGTGCAAGGATGGTGACAATTGGACCAGAGTAACTTTTAAACCAGACCTGGAAAAATTTAACATGACCCATCTTGAAGATGATGTTGTTGCACTGATGAAAAAGAGAGTCTTGGATTTGGCTGGATGCCTTGGTAAAACCGTGAAGGTTGAGCTGAATGGACAAAGGGTCCCTGTAAGATCATTTCAAGATTATGTAGATCTCTACCTCAAATCAGCATCCTCAATCCAGGCGGAACCTCCCAAAAGGTATCACATTAGGCCTAATGAGAGATGGGAAATTGTGGTGACCTTAAGTGAGGGCCAGTTCCAACAGGTCAGCTTTGTGAACGGGATTGCAACAATCAAGGGTGGGACTCATGTTGAATACATCACTAATCAAATAGCAAATTTTGTGATGACTGCTGTAAATAAGAAGAACAAAAATGCTAACGTGAAGGCTCATAATGTGAAGAGCTATTTGTGGGTTTTTATCAATGCTCTCATTGATAATCCATCCTTCGACTCCCAAACCAAGGAAACTTTGACAAAACGTGCAAACAGTTTCGGTTCTGCATGTGAACTTACGCCAGATTTTTTGAAGAATGTGGCCACAAAATCTGGAATTATGGACAGCGTTCTCTCATGGGTTAATTTCAAGCAAAGCAAAGATTTGAAGAAAACGGATGGAGCAAAAACAGAAAAGATTAGTGGTATCGAAAAGTTGGAGGACGCCAATTGTGCTGGAGGGAAGAACTCAGAAAAATGTACCTTAATTTTGACGGAAGGAGATTCGGCTAAGGCCCTTGCAATGGCTGGGCTCGGTGTAGTAGGACGAGACTTTTATGGTGTATTCCCACTCAGAGGTAAATTGCTCAATGTGAGGGAAGCAAGTAGTAAACAAATCACAGAGAATAAAGAAATTCAGTACATCAAGCAAATTCTTGGACTTCAGCAAGGGAAGGAATACAACAATGCTAGGGCTTTGAGATACGGTCATTTGATGATTATGACCGATCAGGACCACGATGGCTCACACATTAAAGGACTCTTGATCAACTTTATTCATTCTTTTTGGCCTTCTCTCCTAAGAGTGCCATCGTTCTTGGTTGAATTCATAACGCCAATTGTCAAGGCTACTCATAAGAATGGAACTGTTTTATCTTTCTATACCATGCCCGAGTACGAAGCCTGGAAAGAGAGCTTGAGGGGCAATGCAAGTGGCTGGTCAATCAAGTACTATAAGGGGTTGGGAACAAGCACATCAAAAGAAGGAAGAGAGTACTTTGAACAGCTGACAAAGCACAAGAAAGATTTTATTTGGCAAGATGATAATGACGGGGAGGCCATTGAGCTTGCTTTCAGTAAGAAGAAGATTGAAGATAGAAAGAATTGGCTCCGTCAATTTGAGCCTGGTACCCATCTAGATCAGACAGGAAAATTGATAAAATACAGTGACTTCGTTAACAAGGAGCTTATATTATTTTCAATGGCTGATTTACAAAGGTCTATTCCGTCAATGGTTGATGGCCTTAAGCCTGGCCAAAGGAAGATCCTTTTCTGTTCTTTCAAGAGGAACTTTATCAAAGAAGCAAAGGTTTCACAATTTTCCGGTTACGTATCTGAGCACTCTGCTTATCATCATGGTGAGCAGAGTCTTGCTAGTACCATCATTGGAATGGCACAGGACTTTGTTGGCAGTAACAACATTAATCTTCTTCTACCAAATGGACAGTTTGGCACACGGAACCATGGAGGCAAAGATCATGCAAGTTCTAGGTACATTTACACTAAACTTTCAAATGTCACACGGTTCCTTTTCCCGAGAGATGATGACAAGCTTCTTAACTACTTAAATGAAGATGGCCAGTCGATTGAACCAACCTGGTATATGCCTATCATCCCAACCGTTCTTGTCAATGGAAGTGAAGGAATTGGAACTGGTTGGAGTTCATACGTTCCAAACTATAATCCTAGAGACATCATTAGAAATGTCAGACGCATGTTGGAGGGAGAAACGATGTTGCCAATGGATCCGTGGTATAGAGGTTTTTCAGGAACTATAGAGAAAACTGCCACTAAAGAAGGAGGTACTACTTACACTGTTAGTGGAATTATAGAGGAAGTCAGCGATACGACGTTGAGAATAGTTGAATTGCCAGTCCGCCGATGGACTAGTGACTACAAGGACTTTCTTGACTCTGTCACAAGAGTTGCATCAAAGCATGACAAAGATAAAGAAAAAGCAGCAAAAGATCCTTTTATTGAGCAAGCTGATCACCACAGCGATGACAAAATTGTTTCCATTGATGTTCACTTAACAGAGGAAAACATGTTATTGGCCATCCAGGAAGGTTTGAAGAAGAAATTCAAACTAACTACAACTGTCAGCACTAGCAACATGCACCTGTTTGATGCAAATGGCGTCATTAAGAAATATGACACCCCAGAACAAATTCTTGAGGAATTTTTCCCCCTTAGACTTGAATTCTACGAGAAAAGAAAGAGAATTCTTTTGGATAACCTTGAAATGGAGTTGCTTAAACTGGAAAACAAGGTGAGGTTCATTCTTGCTGTTGTGAATGAAGAGATAAAAGTAAGCAATAGAAAAAAGGTTGATTTGTTCCACGAGCTTCAAGCGAAAGGCTTTACACCCTTTCCAAAGAAGACTAAATCTGTTGAGCCGGAGATTGCTGGGGCATCTAATGAAACTGATGAAGCAGAGGAGAGCCCGGAAGTGGTAAAAGGGGAACGAATTAGTGATTATGAGTATCTACTAGCTCTGCCAATTGGAACCTTGACCATCGAGAAGGTTCAGGAGCTATGTAGTGATAGAGACAAGCTGAAAGGAGAAGTGGACGATTTGAGGAAGGCAACCCCCAAGTCTTTGTGGCTGAATGACCTTGATTATCTTGAGAAAGAGCTTGATGAGATGGATAGAAATGATGCTCAGACAATGGAGTTAAGAAAACAACAGCGAGAGAAAGCAAATATCGATTTAAAGCCAAAAGTGTCAAGAAATGCACCAAAAGCTCCACGTAACAGTAAGAAAACCAGCAATGTGGAAACTGTCACCGAAAGTATGGACACAACATATAGTTCTACAACAACTGAAGTTGCAAATAACCCGGTGGTGAAGCCGAAAGGCAAAGCAGCTCCAAGAAAAGCTCCTGCTAAAAAGAAGGGTAAAGCAGCAGTTCTTGACGATGACGAAGATGACGAAGTCCTCGAGCTTAAAGATCGTCTTGCTGCCTATAAAATTGAGTCATCTCCTGAACCATCAGAAGTTTCAGCCATGGAAACTGAAGTGCAGGAAGTACAACAACAAGCGGCCAAGAAGAAAGAACCTAGCAAGAGAGCACCTGCCAAGAAGAAAACTACTGCAAAGTCAGCTCAGATCTCCATTAGCGACGACGACAACGACGGAGATTTCGAAATAAAGGAAGTAGACCCTCCGGCAGCCAAGAAGGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAAAGGCAGCTGCAGGAAATAGCAAAACAACCAAGCCCCCTGCTGCAGGAGCGAAGTTGGGGCAGAAACTGATAACTCAAATGCTAGAACCAGCAGCAGAGAACTCCGGCATCTCACCAGAGAAGAAAGTGAGGAAGATAAGAGCATCACCTTTCAACAAGAAAAGTGGCTCTTTATTGGGAAGAACAATAGGGGAAGAAGAAGAGGATGAAAACGACGATGAAGGGAAGTTGATGGGTTCTGCTTCTTTCGAGACTAGTGAAGAAGTTCAGCTGGCGAGAGGGAGATCTCGGAGAGCAAACAGAACAACACAGGTCAGGTATGTGCTTAGTGATTCAGATGGTGAGGTAGCTTCTCAGGATTCAGACTTCGATGAAGACGAAGCCAGCCTTGATGAAGATTGACTGAAGAAATCTCCTTTGTATGTATATAGATAACTTCTTTCCGGTGAAAAAAATTAAGATCTTCCTGACTCTTATGTCTTCTATTGGTGTAACAGTATTTGCTAGAATTTAAGCGGTCAGTGTTGTTATTGGGGATCGCCATCTTATGAAGATTTGGCATTTGATGTAACTTTTCTATGTAACGTTGACATTCAGAACAAAAAAAGAACAGAATTCTACCCATACTTTGGAGGGTAAATAATATTCATTCCTATGGAAGAAAACGAAGAGTTTTGTAAAGCTGAAAAGCATAGTTTGC

Coding sequence (CDS)

ATGGTTGTCGAAAAGAAACGGCCACTTCAGAACAGCAACGCCGCCAATGTCGACTCCAATCCGGCAGGTCCAAAGAAAACAATCGAAGAAATGTACCAAAAGAAGTCTCAGCTCGAGCACATTCTTCTCAGGCCCGATACCTATGTCGGATCTATTGAAAAGCATACCCAAAACCTCTGGGTTTACGAGAATGAAAAAATGGTCCACCGATCAATCTCTTACGTGCCTGGTCTTTACAAGATCTTTGATGAAATCTTGGTCAATGCCGCAGATAATAAGCAGAGAGACCCTTCCATGGATTCTGTCAAGGTCAATATTGATGTCGAACAGAACTGTATCAGTGTTTTCAACAATGGAGATGGAGTTCCGGTTGAAATTCATCAGGAAGAGAAGGTTTATGTGCCTGAGTTGATCTTTGGACATTTGTTGACTAGTAGTAACTACGATGATACCGAAAAGAAAACCACTGGTGGACGGAATGGGTATGGTGCGAAACTTACCAATATTTTTTCTTCTGAATTTGTGATCGAAACGGCTGATGGAAGGCGCCTGAAGAAGTATAAGCAGGTATTCAATGATAACATGGGTAAAAAATCAGAGCCGATTATAACAAAGTGCAAGGATGGTGACAATTGGACCAGAGTAACTTTTAAACCAGACCTGGAAAAATTTAACATGACCCATCTTGAAGATGATGTTGTTGCACTGATGAAAAAGAGAGTCTTGGATTTGGCTGGATGCCTTGGTAAAACCGTGAAGGTTGAGCTGAATGGACAAAGGGTCCCTGTAAGATCATTTCAAGATTATGTAGATCTCTACCTCAAATCAGCATCCTCAATCCAGGCGGAACCTCCCAAAAGGTATCACATTAGGCCTAATGAGAGATGGGAAATTGTGGTGACCTTAAGTGAGGGCCAGTTCCAACAGGTCAGCTTTGTGAACGGGATTGCAACAATCAAGGGTGGGACTCATGTTGAATACATCACTAATCAAATAGCAAATTTTGTGATGACTGCTGTAAATAAGAAGAACAAAAATGCTAACGTGAAGGCTCATAATGTGAAGAGCTATTTGTGGGTTTTTATCAATGCTCTCATTGATAATCCATCCTTCGACTCCCAAACCAAGGAAACTTTGACAAAACGTGCAAACAGTTTCGGTTCTGCATGTGAACTTACGCCAGATTTTTTGAAGAATGTGGCCACAAAATCTGGAATTATGGACAGCGTTCTCTCATGGGTTAATTTCAAGCAAAGCAAAGATTTGAAGAAAACGGATGGAGCAAAAACAGAAAAGATTAGTGGTATCGAAAAGTTGGAGGACGCCAATTGTGCTGGAGGGAAGAACTCAGAAAAATGTACCTTAATTTTGACGGAAGGAGATTCGGCTAAGGCCCTTGCAATGGCTGGGCTCGGTGTAGTAGGACGAGACTTTTATGGTGTATTCCCACTCAGAGGTAAATTGCTCAATGTGAGGGAAGCAAGTAGTAAACAAATCACAGAGAATAAAGAAATTCAGTACATCAAGCAAATTCTTGGACTTCAGCAAGGGAAGGAATACAACAATGCTAGGGCTTTGAGATACGGTCATTTGATGATTATGACCGATCAGGACCACGATGGCTCACACATTAAAGGACTCTTGATCAACTTTATTCATTCTTTTTGGCCTTCTCTCCTAAGAGTGCCATCGTTCTTGGTTGAATTCATAACGCCAATTGTCAAGGCTACTCATAAGAATGGAACTGTTTTATCTTTCTATACCATGCCCGAGTACGAAGCCTGGAAAGAGAGCTTGAGGGGCAATGCAAGTGGCTGGTCAATCAAGTACTATAAGGGGTTGGGAACAAGCACATCAAAAGAAGGAAGAGAGTACTTTGAACAGCTGACAAAGCACAAGAAAGATTTTATTTGGCAAGATGATAATGACGGGGAGGCCATTGAGCTTGCTTTCAGTAAGAAGAAGATTGAAGATAGAAAGAATTGGCTCCGTCAATTTGAGCCTGGTACCCATCTAGATCAGACAGGAAAATTGATAAAATACAGTGACTTCGTTAACAAGGAGCTTATATTATTTTCAATGGCTGATTTACAAAGGTCTATTCCGTCAATGGTTGATGGCCTTAAGCCTGGCCAAAGGAAGATCCTTTTCTGTTCTTTCAAGAGGAACTTTATCAAAGAAGCAAAGGTTTCACAATTTTCCGGTTACGTATCTGAGCACTCTGCTTATCATCATGGTGAGCAGAGTCTTGCTAGTACCATCATTGGAATGGCACAGGACTTTGTTGGCAGTAACAACATTAATCTTCTTCTACCAAATGGACAGTTTGGCACACGGAACCATGGAGGCAAAGATCATGCAAGTTCTAGGTACATTTACACTAAACTTTCAAATGTCACACGGTTCCTTTTCCCGAGAGATGATGACAAGCTTCTTAACTACTTAAATGAAGATGGCCAGTCGATTGAACCAACCTGGTATATGCCTATCATCCCAACCGTTCTTGTCAATGGAAGTGAAGGAATTGGAACTGGTTGGAGTTCATACGTTCCAAACTATAATCCTAGAGACATCATTAGAAATGTCAGACGCATGTTGGAGGGAGAAACGATGTTGCCAATGGATCCGTGGTATAGAGGTTTTTCAGGAACTATAGAGAAAACTGCCACTAAAGAAGGAGGTACTACTTACACTGTTAGTGGAATTATAGAGGAAGTCAGCGATACGACGTTGAGAATAGTTGAATTGCCAGTCCGCCGATGGACTAGTGACTACAAGGACTTTCTTGACTCTGTCACAAGAGTTGCATCAAAGCATGACAAAGATAAAGAAAAAGCAGCAAAAGATCCTTTTATTGAGCAAGCTGATCACCACAGCGATGACAAAATTGTTTCCATTGATGTTCACTTAACAGAGGAAAACATGTTATTGGCCATCCAGGAAGGTTTGAAGAAGAAATTCAAACTAACTACAACTGTCAGCACTAGCAACATGCACCTGTTTGATGCAAATGGCGTCATTAAGAAATATGACACCCCAGAACAAATTCTTGAGGAATTTTTCCCCCTTAGACTTGAATTCTACGAGAAAAGAAAGAGAATTCTTTTGGATAACCTTGAAATGGAGTTGCTTAAACTGGAAAACAAGGTGAGGTTCATTCTTGCTGTTGTGAATGAAGAGATAAAAGTAAGCAATAGAAAAAAGGTTGATTTGTTCCACGAGCTTCAAGCGAAAGGCTTTACACCCTTTCCAAAGAAGACTAAATCTGTTGAGCCGGAGATTGCTGGGGCATCTAATGAAACTGATGAAGCAGAGGAGAGCCCGGAAGTGGTAAAAGGGGAACGAATTAGTGATTATGAGTATCTACTAGCTCTGCCAATTGGAACCTTGACCATCGAGAAGGTTCAGGAGCTATGTAGTGATAGAGACAAGCTGAAAGGAGAAGTGGACGATTTGAGGAAGGCAACCCCCAAGTCTTTGTGGCTGAATGACCTTGATTATCTTGAGAAAGAGCTTGATGAGATGGATAGAAATGATGCTCAGACAATGGAGTTAAGAAAACAACAGCGAGAGAAAGCAAATATCGATTTAAAGCCAAAAGTGTCAAGAAATGCACCAAAAGCTCCACGTAACAGTAAGAAAACCAGCAATGTGGAAACTGTCACCGAAAGTATGGACACAACATATAGTTCTACAACAACTGAAGTTGCAAATAACCCGGTGGTGAAGCCGAAAGGCAAAGCAGCTCCAAGAAAAGCTCCTGCTAAAAAGAAGGGTAAAGCAGCAGTTCTTGACGATGACGAAGATGACGAAGTCCTCGAGCTTAAAGATCGTCTTGCTGCCTATAAAATTGAGTCATCTCCTGAACCATCAGAAGTTTCAGCCATGGAAACTGAAGTGCAGGAAGTACAACAACAAGCGGCCAAGAAGAAAGAACCTAGCAAGAGAGCACCTGCCAAGAAGAAAACTACTGCAAAGTCAGCTCAGATCTCCATTAGCGACGACGACAACGACGGAGATTTCGAAATAAAGGAAGTAGACCCTCCGGCAGCCAAGAAGGGAGGAGGAAGAGGAGGAGGAGGAGGAAGAAAGGCAGCTGCAGGAAATAGCAAAACAACCAAGCCCCCTGCTGCAGGAGCGAAGTTGGGGCAGAAACTGATAACTCAAATGCTAGAACCAGCAGCAGAGAACTCCGGCATCTCACCAGAGAAGAAAGTGAGGAAGATAAGAGCATCACCTTTCAACAAGAAAAGTGGCTCTTTATTGGGAAGAACAATAGGGGAAGAAGAAGAGGATGAAAACGACGATGAAGGGAAGTTGATGGGTTCTGCTTCTTTCGAGACTAGTGAAGAAGTTCAGCTGGCGAGAGGGAGATCTCGGAGAGCAAACAGAACAACACAGGTCAGGTATGTGCTTAGTGATTCAGATGGTGAGGTAGCTTCTCAGGATTCAGACTTCGATGAAGACGAAGCCAGCCTTGATGAAGATTGA

Protein sequence

MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLWVYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGDGVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETADGRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKRVLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVVTLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWVFINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSKDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYGVFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGFTPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPKVSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGKAAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAKKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAGAKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDEGKLMGSASFETSEEVQLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED*

Homology

[Close]

BLAST of CSPI03G29600 vs. ExPASy Swiss-Prot
Match: P30182 (DNA topoisomerase 2 OS=Arabidopsis thaliana OX=3702 GN=TOP2 PE=2 SV=2)

HSP 1 Score: 1759.6 bits (4556), Expect = 0.0e+00
Identity = 956/1512 (63.23%), Postives = 1163/1512 (76.92%), Query Frame = 0


Query: 6    KRPLQNSNAANVDSNPAGPK-----KTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 65
            K PLQNSNAANV   PA  +     KTIEEMYQKKSQLEHILLRPDTY+GSIEKHTQ LW
Sbjct: 4    KLPLQNSNAANVAKAPAKSRAAAGGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQTLW 63

Query: 66   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 125
            VYE ++MV R ++YVPGLYKIFDEILVNAADNKQRD  MDSV+V IDVEQN ISV N+G 
Sbjct: 64   VYEKDEMVQRPVTYVPGLYKIFDEILVNAADNKQRDAKMDSVQVVIDVEQNLISVCNSGA 123

Query: 126  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 185
            GVPVEIHQEE +YVPE+IFGHLLTSSNYDD  KKTTGGRNGYGAKLTNIFS+EF+IETAD
Sbjct: 124  GVPVEIHQEEGIYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 183

Query: 186  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 245
            G+RLKKYKQVF +NMGKKSEP+ITKC   +NWT+VTFKPDL+KFNMT LEDDVVALM KR
Sbjct: 184  GKRLKKYKQVFENNMGKKSEPVITKCNKSENWTKVTFKPDLKKFNMTELEDDVVALMSKR 243

Query: 246  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPP-KRYHIRPNERWEIV 305
            V D+AGCLGK+VKVELNG+++PV+SF DYVDLYL +A+  + E P  R   + N+RWE+ 
Sbjct: 244  VFDIAGCLGKSVKVELNGKQIPVKSFTDYVDLYLSAANKSRTEDPLPRLTEKVNDRWEVC 303

Query: 306  VTLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLW 365
            V+LSEGQFQQVSFVN IATIKGGTHV+Y+T+QI N ++ AVNKKNKNANVKAHNVK++LW
Sbjct: 304  VSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNHLW 363

Query: 366  VFINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQS 425
            VF+NALIDNP+FDSQTKETLT R +SFGS CEL+ DFLK V  KSG+++++LSW +FKQ+
Sbjct: 364  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVG-KSGVVENLLSWADFKQN 423

Query: 426  KDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFY 485
            KDLKK+DGAKT ++  +EKL+DA  AGGKNS  CTLILTEGDSAK+LA+AG  V+G ++ 
Sbjct: 424  KDLKKSDGAKTGRVL-VEKLDDAAEAGGKNSRLCTLILTEGDSAKSLALAGRSVLGNNYC 483

Query: 486  GVFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDH 545
            GVFPLRGKLLNVREAS+ QIT NKEI+ +K+ILGL+Q  +Y N  +LRYG +MIMTDQDH
Sbjct: 484  GVFPLRGKLLNVREASTTQITNNKEIENLKKILGLKQNMKYENVNSLRYGQMMIMTDQDH 543

Query: 546  DGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGT--VLSFYTMPEYEAWKE 605
            DGSHIKGLLINFIHSFWPSLL+VPSFLVEFITPIVKAT K GT  VLSFY+MPEYE WKE
Sbjct: 544  DGSHIKGLLINFIHSFWPSLLQVPSFLVEFITPIVKATRK-GTKKVLSFYSMPEYEEWKE 603

Query: 606  SLRGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIE 665
            SL+GNA+GW IKYYKGLGTST++EG+EYF  L  HKKDF+W+D+ DGEAIELAFSKKKIE
Sbjct: 604  SLKGNATGWDIKYYKGLGTSTAEEGKEYFSNLGLHKKDFVWEDEQDGEAIELAFSKKKIE 663

Query: 666  DRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 725
             RKNWL  + PG HLDQ    + YSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF
Sbjct: 664  ARKNWLSSYVPGNHLDQRQPKVTYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 723

Query: 726  CSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFG 785
             +FK+   KE KV+Q  GYVS  SAYHHGEQSLAS IIGMAQD+VGSNNINLLLPNGQFG
Sbjct: 724  VAFKKIARKEMKVAQLVGYVSLLSAYHHGEQSLASAIIGMAQDYVGSNNINLLLPNGQFG 783

Query: 786  TRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVN 845
            TR  GGKD AS+RYI+TKLS VTR LFP+DDD LL+YLNEDGQ IEPTWYMPIIPTVLVN
Sbjct: 784  TRTSGGKDSASARYIFTKLSPVTRILFPKDDDLLLDYLNEDGQRIEPTWYMPIIPTVLVN 843

Query: 846  GSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTY 905
            G+EGIGTGWS+++PNYNPR+I+ NVRR+L GE+M+PMDPWYRGF GTIEKTA+KEGG TY
Sbjct: 844  GAEGIGTGWSTFIPNYNPREIVANVRRLLNGESMVPMDPWYRGFKGTIEKTASKEGGCTY 903

Query: 906  TVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADH 965
            T++G+ EEV +TT+RI ELP+RRW  DYK+FL S+     K D         PF +    
Sbjct: 904  TITGLYEEVDETTIRITELPIRRWNDDYKNFLQSL-----KTDNGA------PFFQDVKA 963

Query: 966  HSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQIL 1025
            ++D+K V  D+ L+EENML A QEG  KKFKLTTT++TSNMHLFD  GVIKKY TPEQIL
Sbjct: 964  YNDEKSVDFDLILSEENMLAARQEGFLKKFKLTTTIATSNMHLFDKKGVIKKYVTPEQIL 1023

Query: 1026 EEFFPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQA 1085
            EEFF LR E+YEKRK  ++ N+E+ELLKLENK RFILAV++ EI V+ RKK D+  +L+ 
Sbjct: 1024 EEFFDLRFEYYEKRKETVVKNMEIELLKLENKARFILAVLSGEIIVNKRKKADIVEDLRQ 1083

Query: 1086 KGFTPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERI-------SDYEYLLALPIGTL 1145
            KGFTPFP+K +SVE  IAGA ++ D AEE  E++            S+Y+YLLA+ I +L
Sbjct: 1084 KGFTPFPRKAESVEAAIAGAVDD-DAAEEPEEILVDPESSSSYIPGSEYDYLLAMAIASL 1143

Query: 1146 TIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMEL--RKQ 1205
            TIEKV+EL +DRDK+   V D++K TPKSLWL+DL+ L+KEL+++D  DAQ  +     Q
Sbjct: 1144 TIEKVEELLADRDKMIIAVADMKKTTPKSLWLSDLESLDKELEKLDLKDAQVQQAIEAAQ 1203

Query: 1206 QREKANIDLKPKVSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGK- 1265
            ++ +A      KV R APK P   KKT+   + +E+ + +YS+  T+     VVKPK + 
Sbjct: 1204 KKIRAKSGAAVKVKRQAPKKPA-PKKTTKKASESETTEASYSAMDTDNNVAEVVKPKARQ 1263

Query: 1266 AAPRKAPAKKKGKAAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQA 1325
             A +KA   +  +A+    D D+ V E+         +     +     E E+ ++ Q+ 
Sbjct: 1264 GAKKKASESETTEASHSAMDTDNNVAEVVKPKGRQGAKKKAPAAAKEVEEDEMLDLAQRL 1323

Query: 1326 AKKKEPSKRAPAKKKTTAKSAQ-ISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAA 1385
            A+    S  APA    TA++++ I++ DDD+D   E+  V     KK       GGRK A
Sbjct: 1324 AQYNFGS--APADSSKTAETSKAIAVDDDDDDVVVEVAPV-----KK-------GGRKPA 1383

Query: 1386 AGNSKTTKPPAAGAKLGQKLI--TQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGR 1445
            A  +K  KPPAA  K G++ +  T++L       G+SPEKKVRK+R+SPFNKKS S++ R
Sbjct: 1384 A--TKAAKPPAAPRKRGKQTVASTEVLA-----IGVSPEKKVRKMRSSPFNKKSSSVMSR 1443

Query: 1446 TIGEEEEDENDDEGKLMGSASFETSEEVQLARGRSRRANRTTQVRYVLSDSDGEVASQDS 1497
                +EE+ +++   + G++S E S     A  R +RANR  ++ YVLSDS+ E A+ DS
Sbjct: 1444 LADNKEEESSEN---VAGNSSSEKSGGDVSAISRPQRANR-RKMTYVLSDSESESAN-DS 1473

[Close]

BLAST of CSPI03G29600 vs. ExPASy Swiss-Prot
Match: O24308 (DNA topoisomerase 2 OS=Pisum sativum OX=3888 GN=TOP2 PE=2 SV=1)

HSP 1 Score: 1735.7 bits (4494), Expect = 0.0e+00
Identity = 949/1524 (62.27%), Postives = 1124/1524 (73.75%), Query Frame = 0


Query: 5    KKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLWVYEN 64
            +KRPLQ SNAAN+      P KTIEEMYQKK+QLEHILLRPDTYVGSIEKHTQNLWVYEN
Sbjct: 2    EKRPLQTSNAANI------PSKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLWVYEN 61

Query: 65   EKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGDGVPV 124
            ++MVHR++SYVPGLYKIFDEILVNAADNKQRDPSMDS+KV ID E N +SV+NNGDGVPV
Sbjct: 62   DEMVHRAVSYVPGLYKIFDEILVNAADNKQRDPSMDSLKVTIDPEANTVSVYNNGDGVPV 121

Query: 125  EIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETADGRRL 184
            EIHQEEKVYVPELIFGHLLTSSNYDD  KKTTGGRNGYGAKLTNIFS+EF+IETADGRRL
Sbjct: 122  EIHQEEKVYVPELIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETADGRRL 181

Query: 185  KKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKRVLDL 244
            KKYKQVF++NMG K EP+ITKCK  +NWT+VTFKPDLEKF M +LE+DVVALMKKRVLD+
Sbjct: 182  KKYKQVFSNNMGTKCEPVITKCKASENWTKVTFKPDLEKFKMAYLEEDVVALMKKRVLDM 241

Query: 245  AGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVVTLSE 304
            AGC GKTVKVELNG  +  +SF+DY DL+LK A   +  P  R H +  +RWEI ++LS+
Sbjct: 242  AGCFGKTVKVELNGTLIRFKSFRDYADLFLKCAEKSKPMPLPRIHAKVGDRWEICISLSD 301

Query: 305  GQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWVFINA 364
            GQFQQVSFVN IATIKGGTHV+YITNQI  ++M  VNKK K+ANVKAH VK++LWVF+N+
Sbjct: 302  GQFQQVSFVNSIATIKGGTHVDYITNQITTYIMNKVNKKKKDANVKAHTVKNHLWVFVNS 361

Query: 365  LIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSKDLKK 424
            LIDNP+FDSQTKETLT R  SFGS C++    LK+V  KSGI+D++LSW +FKQSKDLKK
Sbjct: 362  LIDNPAFDSQTKETLTTRQASFGSKCDVPESMLKDV-EKSGIVDTLLSWADFKQSKDLKK 421

Query: 425  TDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYGVFPL 484
            TDG KT+++ G  K EDAN AGG+NSEKCTLILTEGDSAKALAMAGL VVGRD YGVFPL
Sbjct: 422  TDGTKTQRLRGC-KAEDANEAGGRNSEKCTLILTEGDSAKALAMAGLSVVGRDHYGVFPL 481

Query: 485  RGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHDGSHI 544
            RGKLLNVREASSKQI +N+EIQ IK+ILGLQQ KEY N ++LRYGHLMIM DQDHDGSHI
Sbjct: 482  RGKLLNVREASSKQIMDNEEIQNIKKILGLQQNKEYTNVKSLRYGHLMIMADQDHDGSHI 541

Query: 545  KGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLRGNAS 604
            KGLLINFIHSFWPSLL+VPSFLVEF TP+++A+H N T+ SFY+MPEYEAWKE L  +A+
Sbjct: 542  KGLLINFIHSFWPSLLKVPSFLVEFTTPVIRASHPNKTITSFYSMPEYEAWKERLGNSAT 601

Query: 605  GWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRKNWLR 664
             W IKYYKGLGTST +EGREYF  L +H+KDFIW D+ DG AIELAFSKKK E RK W+R
Sbjct: 602  SWKIKYYKGLGTSTPQEGREYFSDLGRHRKDFIWDDELDGNAIELAFSKKKAEGRKIWMR 661

Query: 665  QFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNF 724
             FEPGT  D   KLI Y DFVNKELILFS AD                   LF SFK+  
Sbjct: 662  NFEPGTCRDHEAKLINYKDFVNKELILFSRAD-------------------LFGSFKKKL 721

Query: 725  IKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRNHGGK 784
             KE KV+QF GYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLL PNGQFGT N GGK
Sbjct: 722  YKEIKVAQFIGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLKPNGQFGTCNLGGK 781

Query: 785  DHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSEGIGT 844
            DHAS+RYIYT+LS VTR LF   DDKLL YLNEDG+SIEP WYMPIIP VLVNGSEGIGT
Sbjct: 782  DHASARYIYTELSPVTRCLFHEHDDKLLEYLNEDGKSIEPNWYMPIIPLVLVNGSEGIGT 841

Query: 845  GWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVSGIIE 904
            GWSSY+PNYNPR+II NVRR+L GE ++PMDPWY+GF GTIEK+A KEGG  Y V+G + 
Sbjct: 842  GWSSYIPNYNPREIIANVRRLLNGEELVPMDPWYKGFRGTIEKSA-KEGG--YIVNGTVT 901

Query: 905  EVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSDDKIV 964
            E+ + T RI ELP+R+WT DYK FL+S+T        D     KDP IE    + DD IV
Sbjct: 902  EIDEQTFRITELPIRKWTQDYKQFLESIT--------DGAPNVKDPLIEDFRQNGDDAIV 961

Query: 965  SIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEFFPLR 1024
             I++ +  E +   +QEGL KKFKLT+T+STSNMHLFDA G  KK+DTPEQILEEFFPLR
Sbjct: 962  DIEIKMKPEKIATILQEGLFKKFKLTSTISTSNMHLFDAEG-NKKFDTPEQILEEFFPLR 1021

Query: 1025 LEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGFTPFP 1084
            L++YEK K  +L NL   LL L+NKVRFIL VVN EI VSNRKK +L  EL+ KGFTP P
Sbjct: 1022 LDYYEKSKEYILGNLNRLLLILDNKVRFILGVVNGEIIVSNRKKAELLIELKEKGFTPMP 1081

Query: 1085 KKTKSVEPEIAGASNETDEAEESPE--------VVKGERISDYEYLLALPIGTLTIEKVQ 1144
            +K KS +P++AGA+++  E +E  E         V+G    DY+ LL+LPIGTLT+E VQ
Sbjct: 1082 RKGKSTKPQVAGANDDDSEEQEDAEPETASQSVSVEGATWGDYDDLLSLPIGTLTLESVQ 1141

Query: 1145 ELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANID 1204
            +L  ++ + + E + L      SLWL DLD  EK+LDE+D   A+    R  Q  K    
Sbjct: 1142 KLLDEKTEKEKEYEILSGTPTTSLWLKDLDEFEKKLDELDLKYAEDDRKRASQGSKKANG 1201

Query: 1205 LKPKVSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAK 1264
               K ++  P+  +N+KK  +VE   ++      +         V KPKG+AAP+K    
Sbjct: 1202 FASKPAKKPPQPRKNTKKAKSVEPENDNSSMEIENAVEAAKPAEVAKPKGRAAPKKN--- 1261

Query: 1265 KKGKAAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKR 1324
                   +  + +D++  L++RLAAY IESS E S+  AME+E  EVQQ+AA KK+ +KR
Sbjct: 1262 -------IQKEPEDDIQSLQERLAAYNIESSGEKSQ--AMESE--EVQQKAAGKKQNNKR 1321

Query: 1325 APAKKKTTA----KSAQISISD-DDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSK 1384
              AKKK++       +   ++D DD+D DFE  +      KK       GGRK AA N+K
Sbjct: 1322 GGAKKKSSTIVLESDSDNEVNDVDDDDDDFEEVQQKAAPVKK-------GGRKPAAQNAK 1381

Query: 1385 ------TTKPPAAGAK--------LGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKK 1444
                    K PAA  K         GQKL+T ML+P AE +G SPEKKVRK+R SPFNKK
Sbjct: 1382 KAPAKAPAKAPAAPKKRSVGTKQSAGQKLLTDMLQP-AEGTGTSPEKKVRKMRESPFNKK 1441

Query: 1445 SGSLLGRTIGEEEEDENDDEGKLMGSASFETSEEV-----QLARGRSRRANRTTQVRYVL 1497
            SGS+LGR    ++     D      S +  + +EV     Q AR R +RANR TQ++Y L
Sbjct: 1442 SGSILGRAAAAKDISPIADCSAGSASNTPLSEDEVVEIAPQPARARPQRANR-TQMKYAL 1460

[Close]

BLAST of CSPI03G29600 vs. ExPASy Swiss-Prot
Match: P08096 (DNA topoisomerase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=top2 PE=1 SV=2)

HSP 1 Score: 1206.0 bits (3119), Expect = 0.0e+00
Identity = 656/1379 (47.57%), Postives = 905/1379 (65.63%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60
            M   ++ PL  +N  N +SN       +   YQ+ +  EH+L RPDTY+GSIE  T  +W
Sbjct: 55   MTASEQIPLVTNN-GNGNSN-------VSTQYQRLTPREHVLRRPDTYIGSIEPTTSEMW 114

Query: 61   VYENE--KMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNN 120
            V+++E  K+ +++++YVPGLYKIFDEI+VNAADNK RDP+M+++KV +D E N IS++NN
Sbjct: 115  VFDSEKNKLDYKAVTYVPGLYKIFDEIIVNAADNKVRDPNMNTLKVTLDPEANVISIYNN 174

Query: 121  GDGVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIET 180
            G G+P+EIH +EK+Y+PELIFG+LLTSSNYDD +KK TGGRNGYGAKL NIFS+EFV+ET
Sbjct: 175  GKGIPIEIHDKEKIYIPELIFGNLLTSSNYDDNQKKVTGGRNGYGAKLCNIFSTEFVVET 234

Query: 181  ADGRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMK 240
            AD  R+KKYKQ + DNM +KSEP+IT  K  D +T++TFKPDL KF M  ++DD+V+++K
Sbjct: 235  ADKERMKKYKQTWYDNMSRKSEPVITSLKKPDEYTKITFKPDLAKFGMDKIDDDMVSIIK 294

Query: 241  KRVLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEI 300
            +R+ D+AG + +T KV LN +R+ +  F+ YV++YL S +    EPP+  +   N+RW++
Sbjct: 295  RRIYDMAGTVRET-KVYLNNERISISGFKKYVEMYLASDTKPDEEPPRVIYEHVNDRWDV 354

Query: 301  VVTLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYL 360
               +S+GQF+QVSFVN I+TI+GGTHV Y+ N+I + +   V K+NK A VKA  +K+Y+
Sbjct: 355  AFAVSDGQFKQVSFVNNISTIRGGTHVNYVANKIVDAIDEVVKKENKKAPVKAFQIKNYV 414

Query: 361  WVFINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQ 420
             VF+N  I+NPSFDSQTKETLT + ++FGS C L+  FLK +  KS +++ VL +   K 
Sbjct: 415  QVFVNCQIENPSFDSQTKETLTTKVSAFGSQCTLSDKFLKAI-KKSSVVEEVLKFATAKA 474

Query: 421  SKDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDF 480
             + L K DG    +I+G+ KLEDAN AG K S KC LILTEGDSAK+LA++GL VVGRD+
Sbjct: 475  DQQLSKGDGGLRSRITGLTKLEDANKAGTKESHKCVLILTEGDSAKSLAVSGLSVVGRDY 534

Query: 481  YGVFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQD 540
            YGVFPLRGKLLNVREAS  QI  NKEIQ IK+I+G    K Y + + LRYGHLMIMTDQD
Sbjct: 535  YGVFPLRGKLLNVREASHSQILNNKEIQAIKKIMGFTHKKTYTDVKGLRYGHLMIMTDQD 594

Query: 541  HDGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKES 600
            HDGSHIKGL+IN++ S +PSLL++P FL++FITPI+K T  N  V +FYT+PEYE WKE+
Sbjct: 595  HDGSHIKGLIINYLESSYPSLLQIPGFLIQFITPIIKCTRGN-QVQAFYTLPEYEYWKEA 654

Query: 601  LRGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIED 660
               N  GW IKYYKGLGTS   + + YF  L +H K F    + D E IE+AF+KKK + 
Sbjct: 655  -NNNGRGWKIKYYKGLGTSDHDDMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADV 714

Query: 661  RKNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFC 720
            RK WLR + PG ++D T   I   DF+N+ELI FSMAD  RSIPS+VDGLKPGQRK+++ 
Sbjct: 715  RKEWLRTYRPGIYMDYTQPQIPIDDFINRELIQFSMADNIRSIPSVVDGLKPGQRKVVYY 774

Query: 721  SFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGT 780
             FKRN + E KVS+ +GYV+  +AYHHGE S+  TI+ +AQ+FVGSNNINLL+PNGQFGT
Sbjct: 775  CFKRNLVHETKVSRLAGYVASETAYHHGEVSMEQTIVNLAQNFVGSNNINLLMPNGQFGT 834

Query: 781  RNHGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNG 840
            R+ GGK+ ++SRY+ T LS + R LF  +DD+LLNY N++GQ IEP +Y+PI+P VLVNG
Sbjct: 835  RSEGGKNASASRYLNTALSPLARVLFNSNDDQLLNYQNDEGQWIEPEYYVPILPMVLVNG 894

Query: 841  SEGIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYT 900
            +EGIGTGWS+++PNYNP+DI  N+R ML GE +  M PWYRGF G+I K A       Y 
Sbjct: 895  AEGIGTGWSTFIPNYNPKDITANLRHMLNGEPLEIMTPWYRGFRGSITKVAPDR----YK 954

Query: 901  VSGIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHH 960
            +SGII ++ +  + I ELP+R WT D K++L++      K  K         FI   + H
Sbjct: 955  ISGIINQIGENKVEITELPIRFWTQDMKEYLEAGLVGTEKIRK---------FIVDYESH 1014

Query: 961  SDDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILE 1020
              +  V  +V LTE  M  A+ E L+ KFKL+ T +TSNM  FDA+G IKKYD+ E IL 
Sbjct: 1015 HGEGNVHFNVTLTEAGMKEALNESLEVKFKLSRTQATSNMIAFDASGRIKKYDSVEDILT 1074

Query: 1021 EFFPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAK 1080
            EF+ +RL  Y++RK  +++ LE    +  N+ RFI  ++  E+ VS +KK DL  EL+ K
Sbjct: 1075 EFYEVRLRTYQRRKEHMVNELEKRFDRFSNQARFIHMIIEGELVVSKKKKKDLIVELKEK 1134

Query: 1081 GFTPF--PKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQ 1140
             F P   PKK   V+ E+    N   E E+S +V + E    Y YLL++P+ +LT E+  
Sbjct: 1135 KFQPISKPKKGHLVDLEV---ENALAEEEQSGDVSQDEDSDAYNYLLSMPLWSLTYERYV 1194

Query: 1141 ELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDE-MDRNDAQTMELRKQQREKAN- 1200
            EL   +D++  E+D L K TPK LWL+DLD  E   ++ MD    + +E  +  R+  N 
Sbjct: 1195 ELLKKKDEVMAELDALIKKTPKELWLHDLDAFEHAWNKVMDDIQREMLEEEQSSRDFVNR 1254

Query: 1201 IDLKPKVSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAP 1260
               KP+      + PR    +S+   V +   +    +TT      ++    + A  K P
Sbjct: 1255 TKKKPRGKSTGTRKPRAIAGSSSSTAVKKEASSESKPSTTNRKQQTLL----EFAASKEP 1314

Query: 1261 AKKKGKAAVLDDDEDDEVLELKDRLAAYKIESSP--EPSEVSAMETEVQEVQQQAAKKKE 1320
             +K     ++  +++   L +++     +I  SP  + S+        Q V  + A  K+
Sbjct: 1315 -EKSSDINIVKTEDNSHGLSVEEN----RISKSPGLDSSDSGKSRKRSQSVDSEDAGSKK 1374

Query: 1321 PSKR----APAKKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAA 1368
            P K+    A  + + T K    +I   D++ D     + P             G+KA++
Sbjct: 1375 PVKKIAASASGRGRKTNKPVATTIFSSDDEDDLLPSSLKPSTITSTKASAKNKGKKASS 1396

[Close]

BLAST of CSPI03G29600 vs. ExPASy Swiss-Prot
Match: Q55BP5 (Probable DNA topoisomerase 2 OS=Dictyostelium discoideum OX=44689 GN=top2 PE=3 SV=1)

HSP 1 Score: 1166.0 bits (3015), Expect = 0.0e+00
Identity = 665/1414 (47.03%), Postives = 910/1414 (64.36%), Query Frame = 0


Query: 4    EKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLWVYE 63
            +K     N N     ++ A   K+IEE+YQKK  L+ ILLRPDTY+GS E+  + LWV+E
Sbjct: 79   DKSSSSDNENVFKNIASSAKKGKSIEEIYQKKELLDQILLRPDTYIGSTERQEEELWVWE 138

Query: 64   NEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGDGVP 123
            +++MVHR +S+VPG+YKIFDEILVNAADNKQR+ +M  +KV ID E+  ISV N+G G+P
Sbjct: 139  DKRMVHRKVSFVPGIYKIFDEILVNAADNKQREGNMKFIKVVIDREKGFISVTNDGAGIP 198

Query: 124  VEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETADGRR 183
            +++H E K+Y+PELIFG+LLTSS+YDD+EK+ TGGRNG+GAKL NIFS++F++E AD + 
Sbjct: 199  IQVHSEHKIYIPELIFGNLLTSSHYDDSEKRLTGGRNGFGAKLANIFSTKFIVECADSKS 258

Query: 184  LKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKRVLD 243
             K YKQ F +NM  K +P IT  ++  ++T++TF P+L++F M   +DD+VAL+ KRV D
Sbjct: 259  KKLYKQTFTNNMRSKEDPKITSYQNKTDYTKITFYPELDRFGMVEFDDDLVALLSKRVYD 318

Query: 244  LAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVVTLS 303
            +AGC   T+KV LN + + +RSF+ Y++LY       +   PK Y+ + ++RWE+ VTLS
Sbjct: 319  IAGC-NPTLKVSLNDEELGIRSFEKYINLYFPD----EENAPKVYYEKVSDRWELAVTLS 378

Query: 304  -EGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNK-NANVKAHNVKSYLWVF 363
             E QF QVSFVN I T+KGGTHV +  + I   +   VNKKNK +A++K   +K++L VF
Sbjct: 379  KESQFNQVSFVNSICTVKGGTHVTHALSNIVTAIQEQVNKKNKGSADIKPAFIKNHLSVF 438

Query: 364  INALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVA-TKSGIMDSVLSWVNFKQSK 423
            +N LI+NP FDSQTKETLT + +SFGS CE +  F+K V  +KSGI+ S+L +  FK   
Sbjct: 439  VNCLIENPHFDSQTKETLTSKISSFGSRCEPSEKFIKRVLDSKSGIVASILEFAQFKDQS 498

Query: 424  DLKK--TDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDF 483
             LK+  + G K  K+S I KL+DAN AGG  SE CTLILTEGDSAK+LA AG+ VVG+D 
Sbjct: 499  ALKRSTSSGGKKGKVS-IPKLDDANLAGGTKSEDCTLILTEGDSAKSLATAGISVVGKDH 558

Query: 484  YGVFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQD 543
            YG FPL+GKLLNVR+ S+K +  N EI  I  ILGL+ GK Y     LRYGHLMIMTDQD
Sbjct: 559  YGAFPLKGKLLNVRDQSTK-VINNDEINNIVTILGLKYGKVYETLSDLRYGHLMIMTDQD 618

Query: 544  HDGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKES 603
            HDGSHIKGL+IN +H FWP+LLR+P FLVEFITPIVK    N   +SFYTMPE+  W+E+
Sbjct: 619  HDGSHIKGLIINMVHHFWPTLLRMPGFLVEFITPIVKVFKNNQKPISFYTMPEFLKWRET 678

Query: 604  LRGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIED 663
               N  GW +KYYKGLGTST  EG+EYF  L +HK DF W D+   + IELAFSK + +D
Sbjct: 679  ---NDKGWDVKYYKGLGTSTPGEGKEYFSDLERHKIDFEW-DEGANDNIELAFSKSRADD 738

Query: 664  RKNWLRQFEPGTHLDQTG-KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 723
            RK W+ +   GT L+Q G K + YSDF+NKEL+LFS+AD +RSIP++VDGLK   RK L+
Sbjct: 739  RKKWMAEHIEGTFLEQFGVKKLTYSDFINKELVLFSIADCERSIPNIVDGLKTSHRKTLY 798

Query: 724  CSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFG 783
              FKRN  KE KV+Q  GYVSEHSAYHHGE SL STI+GMAQ+FVGSNNINLL P G +G
Sbjct: 799  SCFKRNLKKEIKVAQLIGYVSEHSAYHHGEASLYSTIVGMAQEFVGSNNINLLNPAGSYG 858

Query: 784  TRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVN 843
            TR  GGKD +S+RYI+T+L+++ R ++  DDD +L+ + +DG+ ++P +Y+P+IP +LVN
Sbjct: 859  TRIAGGKDCSSARYIHTRLNDIARAVYHADDDPILSCVVDDGKKVQPKFYIPVIPMILVN 918

Query: 844  GSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIE-KTATKEGGTT 903
            G  GIGTGWSS +PNYNPRD+I+N+R  ++G+ + P+ PWYRGF G+IE    +K  G  
Sbjct: 919  GCVGIGTGWSSTIPNYNPRDLIQNMRLAIDGKPLKPIKPWYRGFLGSIEANQGSKVQGGQ 978

Query: 904  YTVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLDSV----TRVASKHDKDKEKA------ 963
            Y   GI +++SD    I ELP+  WT DY++ LD +    TR   K +K+K+ A      
Sbjct: 979  YLSKGIWKKLSDNRFEITELPIGFWTQDYRELLDELETPGTRKKKKEEKEKKAASRKGTK 1038

Query: 964  AKDPFIEQADHHSDD----KIVSIDV------------HLTEENMLLAIQEGLKKKFKLT 1023
            AK    +++    DD    K+    V            H   + +    +  ++K FKL 
Sbjct: 1039 AKPTTTKRSKRVDDDDDNEKVTEATVKSYTNYSSESTIHFIIDTIQPVDEINIEKVFKLV 1098

Query: 1024 TTVSTSNMHLFDANGVIKKYDTPEQILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKV 1083
            +T++ +NM +FD  G I+++ T   + E FFPLR++ Y+ RK  L + L  E  +L NK 
Sbjct: 1099 STINETNMVVFDEEGRIQRFATTTALQEHFFPLRIKHYQMRKDFLSERLSEEYSRLSNKA 1158

Query: 1084 RFILAVVNEEIKVSNRKKVDLFHELQAKGFTPFPKK--TKSVEPEIAGASNETDE----- 1143
            RFILAVVN+E+ +SN KKVDL ++L+   F     K   KS   +I    N  DE     
Sbjct: 1159 RFILAVVNKELVISNVKKVDLINKLKEMKFDRIINKNSNKSARDKIKKKKNAFDEEDAAI 1218

Query: 1144 -AEESPEVVKGERISD---YEYLLALPIGTLTIEKVQELCSDRDKLKGEVDDLRKATPKS 1203
             ++E  +  + E+  D   Y+YLL+LP+ +LT+E+V++L  +RD  K E D L     + 
Sbjct: 1219 SSDEEKDGAQEEQDDDTKGYDYLLSLPLWSLTLERVKKLIEERDSKKKEWDILLSTPIQE 1278

Query: 1204 LWLNDLDYLEKELDEMDRNDA----QTMELRKQQREKA---NIDLKPKVSRNAPKAPRNS 1263
            ++  DLD LEK LD+ D  D     QT  L+K+ + KA      +  KV ++  +AP   
Sbjct: 1279 IYKRDLDALEKALDDQDAYDESLKNQTESLKKRTKTKALPRAKKISAKVVKDTKEAPLTK 1338

Query: 1264 --KKTSNVETVTESM----------DTTYSSTTTEVANN--PVVKPKGKAAPRKAPAKKK 1323
              K T  + T T+S           DTT +ST+T  ++N  P+     K   +  PA KK
Sbjct: 1339 LVKPTVKIPTTTDSNVSGSKRKKSDDTTSTSTSTTTSSNTKPIESFFAKEDKKPTPAVKK 1398

Query: 1324 GKAAVLDDD---EDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSK 1345
                 LD D   +DD V+  K +    K     E S+ S  E++ +  Q    +      
Sbjct: 1399 STLVSLDSDSDFDDDVVVSSKPKAPPKKTSKVIELSDESDQESDQESDQGSDPESPPKRS 1458

[Close]

BLAST of CSPI03G29600 vs. ExPASy Swiss-Prot
Match: P11388 (DNA topoisomerase 2-alpha OS=Homo sapiens OX=9606 GN=TOP2A PE=1 SV=3)

HSP 1 Score: 1123.2 bits (2904), Expect = 0.0e+00
Identity = 657/1403 (46.83%), Postives = 864/1403 (61.58%), Query Frame = 0


Query: 1    MVVEKKRPL-QNSNAANVDSNPAGPKK-TIEEMYQKKSQLEHILLRPDTYVGSIEKHTQN 60
            M V   +P+ +N     +  N    K+ ++E +YQKK+QLEHILLRPDTY+GS+E  TQ 
Sbjct: 1    MEVSPLQPVNENMQVNKIKKNEDAKKRLSVERIYQKKTQLEHILLRPDTYIGSVELVTQQ 60

Query: 61   LWVYENEKMV-HRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFN 120
            +WVY+ +  + +R +++VPGLYKIFDEILVNAADNKQRDP M  ++V ID E N IS++N
Sbjct: 61   MWVYDEDVGINYREVTFVPGLYKIFDEILVNAADNKQRDPKMSCIRVTIDPENNLISIWN 120

Query: 121  NGDGVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIE 180
            NG G+PV  H+ EK+YVP LIFG LLTSSNYDD EKK TGGRNGYGAKL NIFS++F +E
Sbjct: 121  NGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVE 180

Query: 181  TADGRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALM 240
            TA     K +KQ + DNMG+  E +  K  +G+++T +TF+PDL KF M  L+ D+VALM
Sbjct: 181  TASREYKKMFKQTWMDNMGRAGE-MELKPFNGEDYTCITFQPDLSKFKMQSLDKDIVALM 240

Query: 241  KKRVLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWE 300
             +R  D+AG   K VKV LNG ++PV+ F+ YVD+YLK          K  H + N RWE
Sbjct: 241  VRRAYDIAGST-KDVKVFLNGNKLPVKGFRSYVDMYLKDKLDETGNSLKVIHEQVNHRWE 300

Query: 301  IVVTLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNK-NANVKAHNVKS 360
            + +T+SE  FQQ+SFVN IAT KGG HV+Y+ +QI   ++  V KKNK    VKAH VK+
Sbjct: 301  VCLTMSEKGFQQISFVNSIATSKGGRHVDYVADQIVTKLVDVVKKKNKGGVAVKAHQVKN 360

Query: 361  YLWVFINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNF 420
            ++W+F+NALI+NP+FDSQTKE +T +  SFGS C+L+  F+K  A   GI++S+L+WV F
Sbjct: 361  HMWIFVNALIENPTFDSQTKENMTLQPKSFGSTCQLSEKFIK-AAIGCGIVESILNWVKF 420

Query: 421  KQSKDL-KKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVG 480
            K    L KK    K  +I GI KL+DAN AGG+NS +CTLILTEGDSAK LA++GLGVVG
Sbjct: 421  KAQVQLNKKCSAVKHNRIKGIPKLDDANDAGGRNSTECTLILTEGDSAKTLAVSGLGVVG 480

Query: 481  RDFYGVFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEY---NNARALRYGHLM 540
            RD YGVFPLRGK+LNVREAS KQI EN EI  I +I+GLQ  K Y   ++ + LRYG +M
Sbjct: 481  RDKYGVFPLRGKILNVREASHKQIMENAEINNIIKIVGLQYKKNYEDEDSLKTLRYGKIM 540

Query: 541  IMTDQDHDGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEY 600
            IMTDQD DGSHIKGLLINFIH  WPSLLR   FL EFITPIVK + KN   ++FY++PE+
Sbjct: 541  IMTDQDQDGSHIKGLLINFIHHNWPSLLR-HRFLEEFITPIVKVS-KNKQEMAFYSLPEF 600

Query: 601  EAWKESLRGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFS 660
            E WK S   N   W +KYYKGLGTSTSKE +EYF  + +H+  F +    D  AI LAFS
Sbjct: 601  EEWKSS-TPNHKKWKVKYYKGLGTSTSKEAKEYFADMKRHRIQFKYSGPEDDAAISLAFS 660

Query: 661  KKKIEDRKNWLRQFE-----------PGTHL-DQTGKLIKYSDFVNKELILFSMADLQRS 720
            KK+I+DRK WL  F            P  +L  QT   + Y+DF+NKELILFS +D +RS
Sbjct: 661  KKQIDDRKEWLTNFMEDRRQRKLLGLPEDYLYGQTTTYLTYNDFINKELILFSNSDNERS 720

Query: 721  IPSMVDGLKPGQRKILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQD 780
            IPSMVDGLKPGQRK+LF  FKRN  +E KV+Q +G V+E S+YHHGE SL  TII +AQ+
Sbjct: 721  IPSMVDGLKPGQRKVLFTCFKRNDKREVKVAQLAGSVAEMSSYHHGEMSLMMTIINLAQN 780

Query: 781  FVGSNNINLLLPNGQFGTRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQ 840
            FVGSNN+NLL P GQFGTR HGGKD AS RYI+T LS++ R LFP  DD  L +L +D Q
Sbjct: 781  FVGSNNLNLLQPIGQFGTRLHGGKDSASPRYIFTMLSSLARLLFPPKDDHTLKFLYDDNQ 840

Query: 841  SIEPTWYMPIIPTVLVNGSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRG 900
             +EP WY+PIIP VL+NG+EGIGTGWS  +PN++ R+I+ N+RR+++GE  LPM P Y+ 
Sbjct: 841  RVEPEWYIPIIPMVLINGAEGIGTGWSCKIPNFDVREIVNNIRRLMDGEEPLPMLPSYKN 900

Query: 901  FSGTIEKTATKEGGTTYTVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHD 960
            F GTIE+ A  +    Y +SG +  ++ TT+ I ELPVR WT  YK+      +V     
Sbjct: 901  FKGTIEELAPNQ----YVISGEVAILNSTTIEISELPVRTWTQTYKE------QVLEPML 960

Query: 961  KDKEKAAKDPFIEQADHHSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHL 1020
               EK    P I     +  D  V   V +TEE +  A + GL K FKL T+++ ++M L
Sbjct: 961  NGTEKT--PPLITDYREYHTDTTVKFVVKMTEEKLAEAERVGLHKVFKLQTSLTCNSMVL 1020

Query: 1021 FDANGVIKKYDTPEQILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEE 1080
            FD  G +KKYDT   IL +FF LRL++Y  RK  LL  L  E  KL N+ RFIL  ++ +
Sbjct: 1021 FDHVGCLKKYDTVLDILRDFFELRLKYYGLRKEWLLGMLGAESAKLNNQARFILEKIDGK 1080

Query: 1081 IKVSNRKKVDLFHELQAKGFTPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISD-- 1140
            I + N+ K +L   L  +G+   P K      +      E +E++   E  K + ++D  
Sbjct: 1081 IIIENKPKKELIKVLIQRGYDSDPVKAWKEAQQKVPDEEENEESDNEKETEKSDSVTDSG 1140

Query: 1141 --YEYLLALPIGTLTIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMD 1200
              + YLL +P+  LT EK  ELC  R++ + E+D L++ +P  LW  DL    +EL+ ++
Sbjct: 1141 PTFNYLLDMPLWYLTKEKKDELCRLRNEKEQELDTLKRKSPSDLWKEDLATFIEELEAVE 1200

Query: 1201 RNDAQTMEL---------RKQQREKANIDLKPKVSRNAPK---------APRNSKKTSNV 1260
              + Q  ++         + ++ + A +   P+  R  P+           +N KK  N 
Sbjct: 1201 AKEKQDEQVGLPGKGGKAKGKKTQMAEVLPSPRGQRVIPRITIEMKAEAEKKNKKKIKNE 1260

Query: 1261 ETVTE------SMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGKAAVLDDDEDDEV 1320
             T          ++        +    P  K K +      P KK  K     D E D  
Sbjct: 1261 NTEGSPQEDGVELEGLKQRLEKKQKREPGTKTKKQTTLAFKPIKKGKKRNPWSDSESDR- 1320

Query: 1321 LELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAKKKTTAKSAQISI 1353
                         S     +V   ET             EP + A   K T    +    
Sbjct: 1321 ------------SSDESNFDVPPRET-------------EPRRAATKTKFTMDLDSDEDF 1359

[Close]

BLAST of CSPI03G29600 vs. ExPASy TrEMBL
Match: A0A0A0LEU2 (DNA topoisomerase 2 OS=Cucumis sativus OX=3659 GN=Csa_3G690290 PE=3 SV=1)

HSP 1 Score: 2798.8 bits (7254), Expect = 0.0e+00
Identity = 1447/1469 (98.50%), Postives = 1449/1469 (98.64%), Query Frame = 0


Query: 31   MYQKKSQLEHILLRPDTYVGSIEKHTQNLWVYENEKMVHRSISYVPGLYKIFDEILVNAA 90
            MYQKKSQLEHILLRPDTYVGSIEKHTQNLWVYENEKMVHRSISYVPGLYKIFDEILVNAA
Sbjct: 1    MYQKKSQLEHILLRPDTYVGSIEKHTQNLWVYENEKMVHRSISYVPGLYKIFDEILVNAA 60

Query: 91   DNKQRDPSMDSVKVNIDVEQNCISVFNNGDGVPVEIHQEEKVYVPELIFGHLLTSSNYDD 150
            DNKQRDPSMDSVKVNIDVEQNCISVFNNGDGVPVEIHQEEKVYVPELIFGHLLTSSNYDD
Sbjct: 61   DNKQRDPSMDSVKVNIDVEQNCISVFNNGDGVPVEIHQEEKVYVPELIFGHLLTSSNYDD 120

Query: 151  TEKKTTGGRNGYGAKLTNIFSSEFVIETADGRRLKKYKQVFNDNMGKKSEPIITKCKDGD 210
            TEKKTTGGRNGYGAKLTNIFSSEFVIETADGRRLKKYKQVFNDNMGKKSEPIITKCK GD
Sbjct: 121  TEKKTTGGRNGYGAKLTNIFSSEFVIETADGRRLKKYKQVFNDNMGKKSEPIITKCKAGD 180

Query: 211  NWTRVTFKPDLEKFNMTHLEDDVVALMKKRVLDLAGCLGKTVKVELNGQRVPVRSFQDYV 270
            NWTRVTFKPDLEKFNMTHLEDDVVALMKKRVLDLAGCLGKTVKVELNGQRVPVRSFQDYV
Sbjct: 181  NWTRVTFKPDLEKFNMTHLEDDVVALMKKRVLDLAGCLGKTVKVELNGQRVPVRSFQDYV 240

Query: 271  DLYLKSASSIQAEPPKRYHIRPNERWEIVVTLSEGQFQQVSFVNGIATIKGGTHVEYITN 330
            DLYLKSASSIQAEPPKRYHIRPNERWEIVVTLSEGQFQQVSFVNGIATIKGGTHVEYITN
Sbjct: 241  DLYLKSASSIQAEPPKRYHIRPNERWEIVVTLSEGQFQQVSFVNGIATIKGGTHVEYITN 300

Query: 331  QIANFVMTAVNKKNKNANVKAHNVKSYLWVFINALIDNPSFDSQTKETLTKRANSFGSAC 390
            QIANFVMTAVNKKNKNANVKAHNVKSYLWVFINALIDNPSFDSQTKETLTKRANSFGSAC
Sbjct: 301  QIANFVMTAVNKKNKNANVKAHNVKSYLWVFINALIDNPSFDSQTKETLTKRANSFGSAC 360

Query: 391  ELTPDFLKNVATKSGIMDSVLSWVNFKQSKDLKKTDGAKTEKISGIEKLEDANCAGGKNS 450
            ELTPDFLKNVATKSGIMDSVLSWVNFKQSKDLKKTDGAKTEKISGIEKLEDANCAGGKNS
Sbjct: 361  ELTPDFLKNVATKSGIMDSVLSWVNFKQSKDLKKTDGAKTEKISGIEKLEDANCAGGKNS 420

Query: 451  EKCTLILTEGDSAKALAMAGLGVVGRDFYGVFPLRGKLLNVREASSKQITENKEIQYIKQ 510
            EKCTLILTEGDSAKALAMAGLGVVGRDFYGVFPLRGKLLNVREASSKQITENKEIQYIKQ
Sbjct: 421  EKCTLILTEGDSAKALAMAGLGVVGRDFYGVFPLRGKLLNVREASSKQITENKEIQYIKQ 480

Query: 511  ILGLQQGKEYNNARALRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLRVPSFLVEFI 570
            ILGLQQGKEYNNARALRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLRVPSFLVEFI
Sbjct: 481  ILGLQQGKEYNNARALRYGHLMIMTDQDHDGSHIKGLLINFIHSFWPSLLRVPSFLVEFI 540

Query: 571  TPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASGWSIKYYKGLGTSTSKEGREYFEQLT 630
            TPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASGWSIKYYKGLGTSTSKEGREYFEQLT
Sbjct: 541  TPIVKATHKNGTVLSFYTMPEYEAWKESLRGNASGWSIKYYKGLGTSTSKEGREYFEQLT 600

Query: 631  KHKKDFIWQDDNDGEAIELAFSKKKIEDRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELI 690
            KHKKDFIWQDDNDGEAIELAFSKKKIEDRKNWLRQFE         KL    + +  ELI
Sbjct: 601  KHKKDFIWQDDNDGEAIELAFSKKKIEDRKNWLRQFE---------KL----NCLTNELI 660

Query: 691  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSL 750
            LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSL
Sbjct: 661  LFSMADLQRSIPSMVDGLKPGQRKILFCSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSL 720

Query: 751  ASTIIGMAQDFVGSNNINLLLPNGQFGTRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDK 810
            ASTIIGMAQDFVGSNNINLLLPNGQFGTRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDK
Sbjct: 721  ASTIIGMAQDFVGSNNINLLLPNGQFGTRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDK 780

Query: 811  LLNYLNEDGQSIEPTWYMPIIPTVLVNGSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGET 870
            LLNYLNEDGQSIEPTWYMPIIPTVLVNGSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGET
Sbjct: 781  LLNYLNEDGQSIEPTWYMPIIPTVLVNGSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGET 840

Query: 871  MLPMDPWYRGFSGTIEKTATKEGGTTYTVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLD 930
            MLPMDPWYRGFSGTIEKTATKEGGTTYTVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLD
Sbjct: 841  MLPMDPWYRGFSGTIEKTATKEGGTTYTVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLD 900

Query: 931  SVTRVASKHDKDKEKAAKDPFIEQADHHSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLT 990
            SVTRVASKHDKDKEKAAKDPFIEQADHHSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLT
Sbjct: 901  SVTRVASKHDKDKEKAAKDPFIEQADHHSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLT 960

Query: 991  TTVSTSNMHLFDANGVIKKYDTPEQILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKV 1050
            TTVSTSNMHLFDANGVIKKYDTPEQILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKV
Sbjct: 961  TTVSTSNMHLFDANGVIKKYDTPEQILEEFFPLRLEFYEKRKRILLDNLEMELLKLENKV 1020

Query: 1051 RFILAVVNEEIKVSNRKKVDLFHELQAKGFTPFPKKTKSVEPEIAGASNETDEAEESPEV 1110
            RFILAVVNEEIKVSNRKKVDLFHELQAKGFTPFPKKTKSVEPEIAGASNETDEAEESPEV
Sbjct: 1021 RFILAVVNEEIKVSNRKKVDLFHELQAKGFTPFPKKTKSVEPEIAGASNETDEAEESPEV 1080

Query: 1111 VKGERISDYEYLLALPIGTLTIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEK 1170
            VKGERISDYEYLLALPIGTLTIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEK
Sbjct: 1081 VKGERISDYEYLLALPIGTLTIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEK 1140

Query: 1171 ELDEMDRNDAQTMELRKQQREKANIDLKPKVSRNAPKAPRNSKKTSNVETVTESMDTTYS 1230
            ELDEMDRNDAQTMELRKQQREKANIDLKPKVSRNAPKAPRNSKKTSNVETVTESMDTTYS
Sbjct: 1141 ELDEMDRNDAQTMELRKQQREKANIDLKPKVSRNAPKAPRNSKKTSNVETVTESMDTTYS 1200

Query: 1231 STTTEVANNPVVKPKGKAAPRKAPAKKKGKAAVLD---DDEDDEVLELKDRLAAYKIESS 1290
            STTTEVANNPVVKPKGKAAPRKAPAKKKGKAAVLD   DDEDDEVLELKDRLAAYKIESS
Sbjct: 1201 STTTEVANNPVVKPKGKAAPRKAPAKKKGKAAVLDDDEDDEDDEVLELKDRLAAYKIESS 1260

Query: 1291 PEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAKKKTTAKSAQISISDDDNDGDFEIKEVD 1350
            PEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAKKKTTAKSAQISISDDDNDGDFEIKEVD
Sbjct: 1261 PEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAKKKTTAKSAQISISDDDNDGDFEIKEVD 1320

Query: 1351 PPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAGAKLGQKLITQMLEPAAENSGISPEKKVR 1410
            PPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAGAKLGQKLITQMLEPAAENSGISPEKKVR
Sbjct: 1321 PPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAGAKLGQKLITQMLEPAAENSGISPEKKVR 1380

Query: 1411 KIRASPFNKKSGSLLGRTIGEEEEDENDDEGKLMGSASFETSEEVQLARGRSRRANRTTQ 1470
            KIRASPFNKKSGSLLGRTIGEEEEDENDDEGKLMGSASFETSEEVQLARGRSRRANRTTQ
Sbjct: 1381 KIRASPFNKKSGSLLGRTIGEEEEDENDDEGKLMGSASFETSEEVQLARGRSRRANRTTQ 1440

Query: 1471 VRYVLSDSDGEVASQDSDFDEDEASLDED 1497
            VRYVLSDSDGEVASQDSDFDEDEASLDED
Sbjct: 1441 VRYVLSDSDGEVASQDSDFDEDEASLDED 1456

[Close]

BLAST of CSPI03G29600 vs. ExPASy TrEMBL
Match: A0A5A7TZH5 (DNA topoisomerase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1871G00030 PE=3 SV=1)

HSP 1 Score: 2789.6 bits (7230), Expect = 0.0e+00
Identity = 1442/1499 (96.20%), Postives = 1465/1499 (97.73%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60
            MVVEKKRPLQNSN ANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW
Sbjct: 35   MVVEKKRPLQNSNTANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 94

Query: 61   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120
            VYEN+KMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD
Sbjct: 95   VYENDKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 154

Query: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 180
            GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFS+EFVIETAD
Sbjct: 155  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFVIETAD 214

Query: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 240
            GRRLKKYKQVFNDNMGKKSEPIITKCK+GDNWTRVTFKPDL KFNMTHLEDDVVALMKKR
Sbjct: 215  GRRLKKYKQVFNDNMGKKSEPIITKCKEGDNWTRVTFKPDLAKFNMTHLEDDVVALMKKR 274

Query: 241  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV 300
            VLDLAGCLGKTVKVELNGQRVPV+SFQDYVDLYLKSASS QAEPPKRYHI+PNERWEIVV
Sbjct: 275  VLDLAGCLGKTVKVELNGQRVPVKSFQDYVDLYLKSASSFQAEPPKRYHIKPNERWEIVV 334

Query: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV 360
            TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIAN+VMTAVNKKNKNANVKAHNVK+YLWV
Sbjct: 335  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANYVMTAVNKKNKNANVKAHNVKNYLWV 394

Query: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420
            FINALIDNPSFDSQTKETLTKRANSFGSACELTP+FLKNVATKSGIMDSVLSWVNFKQSK
Sbjct: 395  FINALIDNPSFDSQTKETLTKRANSFGSACELTPEFLKNVATKSGIMDSVLSWVNFKQSK 454

Query: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480
            DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG
Sbjct: 455  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 514

Query: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD 540
            VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNA+ALRYGHLMIMTDQDHD
Sbjct: 515  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNAKALRYGHLMIMTDQDHD 574

Query: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR 600
            GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYE+WKESLR
Sbjct: 575  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYESWKESLR 634

Query: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660
            GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK
Sbjct: 635  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 694

Query: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720
            NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF
Sbjct: 695  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 754

Query: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780
            KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN
Sbjct: 755  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 814

Query: 781  HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840
            HGGKDHASSRYIYTKLSNVTRFLFP+DDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE
Sbjct: 815  HGGKDHASSRYIYTKLSNVTRFLFPKDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 874

Query: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS 900
            GIGTGWSSYVPNYNPRDIIRNVRRML+GETMLPMDPWYRGFSGTIEKTATKEGGTTYT+S
Sbjct: 875  GIGTGWSSYVPNYNPRDIIRNVRRMLDGETMLPMDPWYRGFSGTIEKTATKEGGTTYTIS 934

Query: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD 960
            GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKH  DKEKAAKDPFIEQADHHSD
Sbjct: 935  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKH--DKEKAAKDPFIEQADHHSD 994

Query: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020
            DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF
Sbjct: 995  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1054

Query: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080
            FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF
Sbjct: 1055 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1114

Query: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS 1140
            TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELC+
Sbjct: 1115 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCN 1174

Query: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK 1200
            DRDKLKGEVDDLRKATPKSLWLNDLD LEKELDE+DRNDAQTMELRKQQR+KAN DLKPK
Sbjct: 1175 DRDKLKGEVDDLRKATPKSLWLNDLDSLEKELDEVDRNDAQTMELRKQQRDKANNDLKPK 1234

Query: 1201 VSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1260
            +SRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK
Sbjct: 1235 ISRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1294

Query: 1261 AAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAK 1320
            AAV D+D+DDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEV  QAAKKKEPSKRAPAK
Sbjct: 1295 AAVPDEDDDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEV--QAAKKKEPSKRAPAK 1354

Query: 1321 KKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAGA 1380
            KKTTAKSAQISISDD++D DFEIKEVDP AAKKGGGR   GGRKAAA N KTTK PAAG 
Sbjct: 1355 KKTTAKSAQISISDDEDDDDFEIKEVDPQAAKKGGGR---GGRKAAAANGKTTKAPAAGG 1414

Query: 1381 KLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDEGKL 1440
            KLGQKLITQMLEP AENSGISPEKKVRKIRASPFNKKSGSLLGR I EEEED  +DEGK+
Sbjct: 1415 KLGQKLITQMLEP-AENSGISPEKKVRKIRASPFNKKSGSLLGRAIEEEEEDGIEDEGKV 1474

Query: 1441 MGSASFETSEEV---QLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED 1497
            MGSAS ETSEEV   Q A GRSRRANR TQVRYVLSDSD E  SQDSDFDEDEASLDED
Sbjct: 1475 MGSASSETSEEVAGFQPAIGRSRRANR-TQVRYVLSDSDDEAVSQDSDFDEDEASLDED 1524

[Close]

BLAST of CSPI03G29600 vs. ExPASy TrEMBL
Match: A0A1S3CFK5 (DNA topoisomerase 2 OS=Cucumis melo OX=3656 GN=LOC103500322 PE=3 SV=1)

HSP 1 Score: 2789.6 bits (7230), Expect = 0.0e+00
Identity = 1442/1499 (96.20%), Postives = 1465/1499 (97.73%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60
            MVVEKKRPLQNSN ANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW
Sbjct: 1    MVVEKKRPLQNSNTANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60

Query: 61   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120
            VYEN+KMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD
Sbjct: 61   VYENDKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120

Query: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 180
            GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFS+EFVIETAD
Sbjct: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFVIETAD 180

Query: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 240
            GRRLKKYKQVFNDNMGKKSEPIITKCK+GDNWTRVTFKPDL KFNMTHLEDDVVALMKKR
Sbjct: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKEGDNWTRVTFKPDLAKFNMTHLEDDVVALMKKR 240

Query: 241  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV 300
            VLDLAGCLGKTVKVELNGQRVPV+SFQDYVDLYLKSASS QAEPPKRYHI+PNERWEIVV
Sbjct: 241  VLDLAGCLGKTVKVELNGQRVPVKSFQDYVDLYLKSASSFQAEPPKRYHIKPNERWEIVV 300

Query: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV 360
            TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIAN+VMTAVNKKNKNANVKAHNVK+YLWV
Sbjct: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANYVMTAVNKKNKNANVKAHNVKNYLWV 360

Query: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420
            FINALIDNPSFDSQTKETLTKRANSFGSACELTP+FLKNVATKSGIMDSVLSWVNFKQSK
Sbjct: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPEFLKNVATKSGIMDSVLSWVNFKQSK 420

Query: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480
            DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG
Sbjct: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480

Query: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD 540
            VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNA+ALRYGHLMIMTDQDHD
Sbjct: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNAKALRYGHLMIMTDQDHD 540

Query: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR 600
            GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYE+WKESLR
Sbjct: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYESWKESLR 600

Query: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660
            GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK
Sbjct: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660

Query: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720
            NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF
Sbjct: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720

Query: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780
            KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN
Sbjct: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780

Query: 781  HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840
            HGGKDHASSRYIYTKLSNVTRFLFP+DDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE
Sbjct: 781  HGGKDHASSRYIYTKLSNVTRFLFPKDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840

Query: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS 900
            GIGTGWSSYVPNYNPRDIIRNVRRML+GETMLPMDPWYRGFSGTIEKTATKEGGTTYT+S
Sbjct: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLDGETMLPMDPWYRGFSGTIEKTATKEGGTTYTIS 900

Query: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD 960
            GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKH  DKEKAAKDPFIEQADHHSD
Sbjct: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKH--DKEKAAKDPFIEQADHHSD 960

Query: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020
            DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF
Sbjct: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020

Query: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080
            FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF
Sbjct: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080

Query: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS 1140
            TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELC+
Sbjct: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCN 1140

Query: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK 1200
            DRDKLKGEVDDLRKATPKSLWLNDLD LEKELDE+DRNDAQTMELRKQQR+KAN DLKPK
Sbjct: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDSLEKELDEVDRNDAQTMELRKQQRDKANNDLKPK 1200

Query: 1201 VSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1260
            +SRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK
Sbjct: 1201 ISRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1260

Query: 1261 AAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAK 1320
            AAV D+D+DDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEV  QAAKKKEPSKRAPAK
Sbjct: 1261 AAVPDEDDDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEV--QAAKKKEPSKRAPAK 1320

Query: 1321 KKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAGA 1380
            KKTTAKSAQISISDD++D DFEIKEVDP AAKKGGGR   GGRKAAA N KTTK PAAG 
Sbjct: 1321 KKTTAKSAQISISDDEDDDDFEIKEVDPQAAKKGGGR---GGRKAAAANGKTTKAPAAGG 1380

Query: 1381 KLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDEGKL 1440
            KLGQKLITQMLEP AENSGISPEKKVRKIRASPFNKKSGSLLGR I EEEED  +DEGK+
Sbjct: 1381 KLGQKLITQMLEP-AENSGISPEKKVRKIRASPFNKKSGSLLGRAIEEEEEDGIEDEGKV 1440

Query: 1441 MGSASFETSEEV---QLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED 1497
            MGSAS ETSEEV   Q A GRSRRANR TQVRYVLSDSD E  SQDSDFDEDEASLDED
Sbjct: 1441 MGSASSETSEEVAGFQPAIGRSRRANR-TQVRYVLSDSDDEAVSQDSDFDEDEASLDED 1490

[Close]

BLAST of CSPI03G29600 vs. ExPASy TrEMBL
Match: A0A6J1F9E0 (DNA topoisomerase 2 OS=Cucurbita moschata OX=3662 GN=LOC111442005 PE=3 SV=1)

HSP 1 Score: 2620.9 bits (6792), Expect = 0.0e+00
Identity = 1356/1503 (90.22%), Postives = 1423/1503 (94.68%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60
            M VEKKRPLQNSNAANVDS+PAGPKKTIEEMYQKK+QLEHILLRPDTYVGSIEKHTQNLW
Sbjct: 1    MAVEKKRPLQNSNAANVDSDPAGPKKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLW 60

Query: 61   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120
            VYEN+KMVHRS++YVPGLYKIFDEILVNAADNKQRDPSMDS+KV ID EQN ISVFNNGD
Sbjct: 61   VYENDKMVHRSVTYVPGLYKIFDEILVNAADNKQRDPSMDSLKVVIDAEQNFISVFNNGD 120

Query: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 180
            GVPVE+HQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFS+EFVIETAD
Sbjct: 121  GVPVEVHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFVIETAD 180

Query: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 240
            GRRLKKYKQVF+DNMGKKSEPIITKCK+GDNWT+VTFKPDL KFNMTHLEDDVVALMKKR
Sbjct: 181  GRRLKKYKQVFSDNMGKKSEPIITKCKEGDNWTKVTFKPDLAKFNMTHLEDDVVALMKKR 240

Query: 241  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV 300
            VLDLAGCLGKTVKVELNGQRVPV+SFQDYVD YLKSA++ Q EPPKRYHIRPNERWEIVV
Sbjct: 241  VLDLAGCLGKTVKVELNGQRVPVKSFQDYVDFYLKSAAAFQTEPPKRYHIRPNERWEIVV 300

Query: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV 360
            TLSEGQFQQVSFVNGIATIKGGTHV+YITNQIAN+VMT VNKKNKNANVKAHNVKSYLWV
Sbjct: 301  TLSEGQFQQVSFVNGIATIKGGTHVDYITNQIANYVMTVVNKKNKNANVKAHNVKSYLWV 360

Query: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420
            FINALIDNP+FDSQTKETLT R +SFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK
Sbjct: 361  FINALIDNPAFDSQTKETLTIRQSSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420

Query: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480
            DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG
Sbjct: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480

Query: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD 540
            VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNA+ALRYGHLMIMTDQDHD
Sbjct: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNAKALRYGHLMIMTDQDHD 540

Query: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR 600
            GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATH+NGTVLSFYTMPEYEAWK++LR
Sbjct: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHRNGTVLSFYTMPEYEAWKDNLR 600

Query: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660
            GNASGWSIKYYKGLGTSTSKEGREYFEQL KHKKDFIWQD++DGEAIELAFSKKKIE+RK
Sbjct: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLAKHKKDFIWQDEHDGEAIELAFSKKKIEERK 660

Query: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720
            NWLRQFE GTHLDQ+ KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF
Sbjct: 661  NWLRQFEAGTHLDQSEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720

Query: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780
            KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN
Sbjct: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780

Query: 781  HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840
            HGGKDHASSRYIYTKLSN TRFLFP+DDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE
Sbjct: 781  HGGKDHASSRYIYTKLSNATRFLFPKDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840

Query: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS 900
            GIGTGWSSY+PNYNPRDIIRNVRRML GE MLPMDPWYRGFSGTIEKTATKEGGT+YTVS
Sbjct: 841  GIGTGWSSYIPNYNPRDIIRNVRRMLNGEAMLPMDPWYRGFSGTIEKTATKEGGTSYTVS 900

Query: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD 960
            GIIEEVSDTTLRI ELPVRRWT+DYKDFLDSVTRV++K+DKDKEKAAKDPFIEQADHHSD
Sbjct: 901  GIIEEVSDTTLRITELPVRRWTNDYKDFLDSVTRVSTKNDKDKEKAAKDPFIEQADHHSD 960

Query: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020
            DK VSIDVHLTEENM+LA+QEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF
Sbjct: 961  DKTVSIDVHLTEENMILAMQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020

Query: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080
            FPLRLEF+EKRKR LL+NLE ELLKLENKVRFILAVVN EI VSNR++VDLFHELQ KGF
Sbjct: 1021 FPLRLEFFEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGF 1080

Query: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS 1140
            TPFPKKTKSVEPE+AGASNETDEAEESPEVVKGER+SDYEYLLAL IGTLTIEKVQELC+
Sbjct: 1081 TPFPKKTKSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCN 1140

Query: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK 1200
            +RDK KGEV++LRKATPKSLWL DLDYLEKELDEMDRNDAQ  E+RKQQR K N D+KPK
Sbjct: 1141 ERDKFKGEVEELRKATPKSLWLKDLDYLEKELDEMDRNDAQADEVRKQQRIKNN-DIKPK 1200

Query: 1201 VSRNAPKAPRNSKKTSNVETVTESMD-TTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKG 1260
            +SRNAPKAPRNSKKTSN ET+TESMD TT SSTTTEVANNPVVKPKGKAAPRKAPAKK+G
Sbjct: 1201 ISRNAPKAPRNSKKTSNSETITESMDITTSSSTTTEVANNPVVKPKGKAAPRKAPAKKQG 1260

Query: 1261 KAAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPA 1320
            K AVLDDD+DDEVLELKDRLAAYK+ESSPEPSEVSAMETEV +V Q AAKKKEPSKRA A
Sbjct: 1261 KTAVLDDDDDDEVLELKDRLAAYKLESSPEPSEVSAMETEVPKV-QAAAKKKEPSKRAAA 1320

Query: 1321 KKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAG 1380
            KKKTTAKSAQ  ISDD +DGDFEIKE+ PPAAKKGGGR       A A  +KTTK     
Sbjct: 1321 KKKTTAKSAQ--ISDDSDDGDFEIKEIAPPAAKKGGGRKAA----ANAKTTKTTKKQEPV 1380

Query: 1381 AKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEE--DENDDE 1440
            A+LGQKLITQMLEP  ENSGISPEKKVRKIR SPFNKKSGS+LGR IGEEEE  +E  +E
Sbjct: 1381 ARLGQKLITQMLEP-TENSGISPEKKVRKIRESPFNKKSGSMLGRKIGEEEEEVEEAGNE 1440

Query: 1441 GKLMGSASFETSEE----VQLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASL 1497
            GK+MGSAS ET++E    V LARGRS+R NR TQVRYV+SDSD E   +DSDFDE EA+L
Sbjct: 1441 GKMMGSASSETTDEEVARVPLARGRSQRTNR-TQVRYVVSDSDSEPVYEDSDFDE-EANL 1492

[Close]

BLAST of CSPI03G29600 vs. ExPASy TrEMBL
Match: A0A6J1F3D6 (DNA topoisomerase 2 OS=Cucurbita moschata OX=3662 GN=LOC111442005 PE=3 SV=1)

HSP 1 Score: 2616.3 bits (6780), Expect = 0.0e+00
Identity = 1356/1503 (90.22%), Postives = 1422/1503 (94.61%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60
            M VEKKRPLQNSNAANVDS+PAGPKKTIEEMYQKK+QLEHILLRPDTYVGSIEKHTQNLW
Sbjct: 1    MAVEKKRPLQNSNAANVDSDPAGPKKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLW 60

Query: 61   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120
            VYEN+KMVHRS++YVPGLYKIFDEILVNAADNKQRDPSMDS+KV ID EQN ISVFNNGD
Sbjct: 61   VYENDKMVHRSVTYVPGLYKIFDEILVNAADNKQRDPSMDSLKVVIDAEQNFISVFNNGD 120

Query: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 180
            GVPVE+HQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFS+EFVIETAD
Sbjct: 121  GVPVEVHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFVIETAD 180

Query: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 240
            GRRLKKYKQVF+DNMGKKSEPIITKCK+GDNWT+VTFKPDL KFNMTHLEDDVVALMKKR
Sbjct: 181  GRRLKKYKQVFSDNMGKKSEPIITKCKEGDNWTKVTFKPDLAKFNMTHLEDDVVALMKKR 240

Query: 241  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV 300
            VLDLAGCLGKTVKVELNGQRVPV+SFQDYVD YLKSA++ Q EPPKRYHIRPNERWEIVV
Sbjct: 241  VLDLAGCLGKTVKVELNGQRVPVKSFQDYVDFYLKSAAAFQTEPPKRYHIRPNERWEIVV 300

Query: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV 360
            TLSEGQFQQVSFVNGIATIKGGTHV+YITNQIAN+VMT VNKKNKNANVKAHNVKSYLWV
Sbjct: 301  TLSEGQFQQVSFVNGIATIKGGTHVDYITNQIANYVMTVVNKKNKNANVKAHNVKSYLWV 360

Query: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420
            FINALIDNP+FDSQTKETLT R +SFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK
Sbjct: 361  FINALIDNPAFDSQTKETLTIRQSSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420

Query: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480
            DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG
Sbjct: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480

Query: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD 540
            VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNA+ALRYGHLMIMTDQDHD
Sbjct: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNAKALRYGHLMIMTDQDHD 540

Query: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR 600
            GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATH+NGTVLSFYTMPEYEAWK++LR
Sbjct: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHRNGTVLSFYTMPEYEAWKDNLR 600

Query: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660
            GNASGWSIKYYKGLGTSTSKEGREYFEQL KHKKDFIWQD++DGEAIELAFSKKKIE+RK
Sbjct: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLAKHKKDFIWQDEHDGEAIELAFSKKKIEERK 660

Query: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720
            NWLRQFE GTHLDQ+ KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF
Sbjct: 661  NWLRQFEAGTHLDQSEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720

Query: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780
            KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN
Sbjct: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780

Query: 781  HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840
            HGGKDHASSRYIYTKLSN TRFLFP+DDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE
Sbjct: 781  HGGKDHASSRYIYTKLSNATRFLFPKDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840

Query: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS 900
            GIGTGWSSY+PNYNPRDIIRNVRRML GE MLPMDPWYRGFSGTIEKTATKEGGT+YTVS
Sbjct: 841  GIGTGWSSYIPNYNPRDIIRNVRRMLNGEAMLPMDPWYRGFSGTIEKTATKEGGTSYTVS 900

Query: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD 960
            GIIEEVSDTTLRI ELPVRRWT+DYKDFLDSVTRV++K+DKDKEKAAKDPFIEQADHHSD
Sbjct: 901  GIIEEVSDTTLRITELPVRRWTNDYKDFLDSVTRVSTKNDKDKEKAAKDPFIEQADHHSD 960

Query: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020
            DK VSIDVHLTEENM+LA+QEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF
Sbjct: 961  DKTVSIDVHLTEENMILAMQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020

Query: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080
            FPLRLEF+EKRKR LL+NLE ELLKLENKVRFILAVVN EI VSNR++VDLFHELQ KGF
Sbjct: 1021 FPLRLEFFEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGF 1080

Query: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS 1140
            TPFPKKTKSVEPE+AGASNETDEAEESPEVVKGER+SDYEYLLAL IGTLTIEKVQELC+
Sbjct: 1081 TPFPKKTKSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCN 1140

Query: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK 1200
            +RDK KGEV++LRKATPKSLWL DLDYLEKELDEMDRNDAQ  E+RKQQR K N D+KPK
Sbjct: 1141 ERDKFKGEVEELRKATPKSLWLKDLDYLEKELDEMDRNDAQADEVRKQQRIKNN-DIKPK 1200

Query: 1201 VSRNAPKAPRNSKKTSNVETVTESMD-TTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKG 1260
            +SRNAPKAPRNSKKTSN ET+TESMD TT SSTTTEVANNPVVKPKGKAAPRKAPA KKG
Sbjct: 1201 ISRNAPKAPRNSKKTSNSETITESMDITTSSSTTTEVANNPVVKPKGKAAPRKAPA-KKG 1260

Query: 1261 KAAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPA 1320
            K AVLDDD+DDEVLELKDRLAAYK+ESSPEPSEVSAMETEV +V Q AAKKKEPSKRA A
Sbjct: 1261 KTAVLDDDDDDEVLELKDRLAAYKLESSPEPSEVSAMETEVPKV-QAAAKKKEPSKRAAA 1320

Query: 1321 KKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAG 1380
            KKKTTAKSAQ  ISDD +DGDFEIKE+ PPAAKKGGGR       A A  +KTTK     
Sbjct: 1321 KKKTTAKSAQ--ISDDSDDGDFEIKEIAPPAAKKGGGRKAA----ANAKTTKTTKKQEPV 1380

Query: 1381 AKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEE--DENDDE 1440
            A+LGQKLITQMLEP  ENSGISPEKKVRKIR SPFNKKSGS+LGR IGEEEE  +E  +E
Sbjct: 1381 ARLGQKLITQMLEP-TENSGISPEKKVRKIRESPFNKKSGSMLGRKIGEEEEEVEEAGNE 1440

Query: 1441 GKLMGSASFETSEE----VQLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASL 1497
            GK+MGSAS ET++E    V LARGRS+R NR TQVRYV+SDSD E   +DSDFDE EA+L
Sbjct: 1441 GKMMGSASSETTDEEVARVPLARGRSQRTNR-TQVRYVVSDSDSEPVYEDSDFDE-EANL 1491

[Close]

BLAST of CSPI03G29600 vs. NCBI nr
Match: XP_011651769.2 (DNA topoisomerase 2 [Cucumis sativus] >KAE8650929.1 hypothetical protein Csa_002335 [Cucumis sativus])

HSP 1 Score: 2902.1 bits (7522), Expect = 0.0e+00
Identity = 1494/1499 (99.67%), Postives = 1494/1499 (99.67%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60
            MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW
Sbjct: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60

Query: 61   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120
            VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD
Sbjct: 61   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120

Query: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 180
            GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD
Sbjct: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 180

Query: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 240
            GRRLKKYKQVFNDNMGKKSEPIITKCK GDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR
Sbjct: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKAGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 240

Query: 241  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV 300
            VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV
Sbjct: 241  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV 300

Query: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV 360
            TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV
Sbjct: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV 360

Query: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420
            FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK
Sbjct: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420

Query: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480
            DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG
Sbjct: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480

Query: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD 540
            VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD
Sbjct: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD 540

Query: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR 600
            GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR
Sbjct: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR 600

Query: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660
            GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK
Sbjct: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660

Query: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720
            NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF
Sbjct: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720

Query: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780
            KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN
Sbjct: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780

Query: 781  HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840
            HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE
Sbjct: 781  HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840

Query: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS 900
            GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS
Sbjct: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS 900

Query: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD 960
            GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD
Sbjct: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD 960

Query: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020
            DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF
Sbjct: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020

Query: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080
            FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF
Sbjct: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080

Query: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS 1140
            TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS
Sbjct: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS 1140

Query: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK 1200
            DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK
Sbjct: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK 1200

Query: 1201 VSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1260
            VSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK
Sbjct: 1201 VSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1260

Query: 1261 AAVLD---DDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRA 1320
            AAVLD   DDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRA
Sbjct: 1261 AAVLDDDEDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRA 1320

Query: 1321 PAKKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPA 1380
            PAKKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGR GGGGRKAAAGNSKTTKPPA
Sbjct: 1321 PAKKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGR-GGGGRKAAAGNSKTTKPPA 1380

Query: 1381 AGAKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDE 1440
            AGAKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDE
Sbjct: 1381 AGAKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDE 1440

Query: 1441 GKLMGSASFETSEEVQLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED 1497
            GKLMGSASFETSEEVQLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED
Sbjct: 1441 GKLMGSASFETSEEVQLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED 1498

[Close]

BLAST of CSPI03G29600 vs. NCBI nr
Match: KAA0048368.1 (DNA topoisomerase 2 [Cucumis melo var. makuwa] >TYK04068.1 DNA topoisomerase 2 [Cucumis melo var. makuwa])

HSP 1 Score: 2789.6 bits (7230), Expect = 0.0e+00
Identity = 1442/1499 (96.20%), Postives = 1465/1499 (97.73%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60
            MVVEKKRPLQNSN ANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW
Sbjct: 35   MVVEKKRPLQNSNTANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 94

Query: 61   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120
            VYEN+KMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD
Sbjct: 95   VYENDKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 154

Query: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 180
            GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFS+EFVIETAD
Sbjct: 155  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFVIETAD 214

Query: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 240
            GRRLKKYKQVFNDNMGKKSEPIITKCK+GDNWTRVTFKPDL KFNMTHLEDDVVALMKKR
Sbjct: 215  GRRLKKYKQVFNDNMGKKSEPIITKCKEGDNWTRVTFKPDLAKFNMTHLEDDVVALMKKR 274

Query: 241  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV 300
            VLDLAGCLGKTVKVELNGQRVPV+SFQDYVDLYLKSASS QAEPPKRYHI+PNERWEIVV
Sbjct: 275  VLDLAGCLGKTVKVELNGQRVPVKSFQDYVDLYLKSASSFQAEPPKRYHIKPNERWEIVV 334

Query: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV 360
            TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIAN+VMTAVNKKNKNANVKAHNVK+YLWV
Sbjct: 335  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANYVMTAVNKKNKNANVKAHNVKNYLWV 394

Query: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420
            FINALIDNPSFDSQTKETLTKRANSFGSACELTP+FLKNVATKSGIMDSVLSWVNFKQSK
Sbjct: 395  FINALIDNPSFDSQTKETLTKRANSFGSACELTPEFLKNVATKSGIMDSVLSWVNFKQSK 454

Query: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480
            DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG
Sbjct: 455  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 514

Query: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD 540
            VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNA+ALRYGHLMIMTDQDHD
Sbjct: 515  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNAKALRYGHLMIMTDQDHD 574

Query: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR 600
            GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYE+WKESLR
Sbjct: 575  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYESWKESLR 634

Query: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660
            GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK
Sbjct: 635  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 694

Query: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720
            NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF
Sbjct: 695  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 754

Query: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780
            KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN
Sbjct: 755  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 814

Query: 781  HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840
            HGGKDHASSRYIYTKLSNVTRFLFP+DDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE
Sbjct: 815  HGGKDHASSRYIYTKLSNVTRFLFPKDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 874

Query: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS 900
            GIGTGWSSYVPNYNPRDIIRNVRRML+GETMLPMDPWYRGFSGTIEKTATKEGGTTYT+S
Sbjct: 875  GIGTGWSSYVPNYNPRDIIRNVRRMLDGETMLPMDPWYRGFSGTIEKTATKEGGTTYTIS 934

Query: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD 960
            GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKH  DKEKAAKDPFIEQADHHSD
Sbjct: 935  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKH--DKEKAAKDPFIEQADHHSD 994

Query: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020
            DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF
Sbjct: 995  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1054

Query: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080
            FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF
Sbjct: 1055 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1114

Query: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS 1140
            TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELC+
Sbjct: 1115 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCN 1174

Query: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK 1200
            DRDKLKGEVDDLRKATPKSLWLNDLD LEKELDE+DRNDAQTMELRKQQR+KAN DLKPK
Sbjct: 1175 DRDKLKGEVDDLRKATPKSLWLNDLDSLEKELDEVDRNDAQTMELRKQQRDKANNDLKPK 1234

Query: 1201 VSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1260
            +SRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK
Sbjct: 1235 ISRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1294

Query: 1261 AAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAK 1320
            AAV D+D+DDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEV  QAAKKKEPSKRAPAK
Sbjct: 1295 AAVPDEDDDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEV--QAAKKKEPSKRAPAK 1354

Query: 1321 KKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAGA 1380
            KKTTAKSAQISISDD++D DFEIKEVDP AAKKGGGR   GGRKAAA N KTTK PAAG 
Sbjct: 1355 KKTTAKSAQISISDDEDDDDFEIKEVDPQAAKKGGGR---GGRKAAAANGKTTKAPAAGG 1414

Query: 1381 KLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDEGKL 1440
            KLGQKLITQMLEP AENSGISPEKKVRKIRASPFNKKSGSLLGR I EEEED  +DEGK+
Sbjct: 1415 KLGQKLITQMLEP-AENSGISPEKKVRKIRASPFNKKSGSLLGRAIEEEEEDGIEDEGKV 1474

Query: 1441 MGSASFETSEEV---QLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED 1497
            MGSAS ETSEEV   Q A GRSRRANR TQVRYVLSDSD E  SQDSDFDEDEASLDED
Sbjct: 1475 MGSASSETSEEVAGFQPAIGRSRRANR-TQVRYVLSDSDDEAVSQDSDFDEDEASLDED 1524

[Close]

BLAST of CSPI03G29600 vs. NCBI nr
Match: XP_008461811.1 (PREDICTED: DNA topoisomerase 2 [Cucumis melo])

HSP 1 Score: 2789.6 bits (7230), Expect = 0.0e+00
Identity = 1442/1499 (96.20%), Postives = 1465/1499 (97.73%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60
            MVVEKKRPLQNSN ANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW
Sbjct: 1    MVVEKKRPLQNSNTANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60

Query: 61   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120
            VYEN+KMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD
Sbjct: 61   VYENDKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120

Query: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 180
            GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFS+EFVIETAD
Sbjct: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFVIETAD 180

Query: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 240
            GRRLKKYKQVFNDNMGKKSEPIITKCK+GDNWTRVTFKPDL KFNMTHLEDDVVALMKKR
Sbjct: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKEGDNWTRVTFKPDLAKFNMTHLEDDVVALMKKR 240

Query: 241  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV 300
            VLDLAGCLGKTVKVELNGQRVPV+SFQDYVDLYLKSASS QAEPPKRYHI+PNERWEIVV
Sbjct: 241  VLDLAGCLGKTVKVELNGQRVPVKSFQDYVDLYLKSASSFQAEPPKRYHIKPNERWEIVV 300

Query: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV 360
            TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIAN+VMTAVNKKNKNANVKAHNVK+YLWV
Sbjct: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANYVMTAVNKKNKNANVKAHNVKNYLWV 360

Query: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420
            FINALIDNPSFDSQTKETLTKRANSFGSACELTP+FLKNVATKSGIMDSVLSWVNFKQSK
Sbjct: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPEFLKNVATKSGIMDSVLSWVNFKQSK 420

Query: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480
            DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG
Sbjct: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480

Query: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD 540
            VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNA+ALRYGHLMIMTDQDHD
Sbjct: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNAKALRYGHLMIMTDQDHD 540

Query: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR 600
            GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYE+WKESLR
Sbjct: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYESWKESLR 600

Query: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660
            GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK
Sbjct: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660

Query: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720
            NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF
Sbjct: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720

Query: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780
            KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN
Sbjct: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780

Query: 781  HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840
            HGGKDHASSRYIYTKLSNVTRFLFP+DDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE
Sbjct: 781  HGGKDHASSRYIYTKLSNVTRFLFPKDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840

Query: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS 900
            GIGTGWSSYVPNYNPRDIIRNVRRML+GETMLPMDPWYRGFSGTIEKTATKEGGTTYT+S
Sbjct: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLDGETMLPMDPWYRGFSGTIEKTATKEGGTTYTIS 900

Query: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD 960
            GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKH  DKEKAAKDPFIEQADHHSD
Sbjct: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKH--DKEKAAKDPFIEQADHHSD 960

Query: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020
            DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF
Sbjct: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020

Query: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080
            FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF
Sbjct: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080

Query: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS 1140
            TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELC+
Sbjct: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCN 1140

Query: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK 1200
            DRDKLKGEVDDLRKATPKSLWLNDLD LEKELDE+DRNDAQTMELRKQQR+KAN DLKPK
Sbjct: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDSLEKELDEVDRNDAQTMELRKQQRDKANNDLKPK 1200

Query: 1201 VSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1260
            +SRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK
Sbjct: 1201 ISRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKGK 1260

Query: 1261 AAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPAK 1320
            AAV D+D+DDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEV  QAAKKKEPSKRAPAK
Sbjct: 1261 AAVPDEDDDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEV--QAAKKKEPSKRAPAK 1320

Query: 1321 KKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAGA 1380
            KKTTAKSAQISISDD++D DFEIKEVDP AAKKGGGR   GGRKAAA N KTTK PAAG 
Sbjct: 1321 KKTTAKSAQISISDDEDDDDFEIKEVDPQAAKKGGGR---GGRKAAAANGKTTKAPAAGG 1380

Query: 1381 KLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDDEGKL 1440
            KLGQKLITQMLEP AENSGISPEKKVRKIRASPFNKKSGSLLGR I EEEED  +DEGK+
Sbjct: 1381 KLGQKLITQMLEP-AENSGISPEKKVRKIRASPFNKKSGSLLGRAIEEEEEDGIEDEGKV 1440

Query: 1441 MGSASFETSEEV---QLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASLDED 1497
            MGSAS ETSEEV   Q A GRSRRANR TQVRYVLSDSD E  SQDSDFDEDEASLDED
Sbjct: 1441 MGSASSETSEEVAGFQPAIGRSRRANR-TQVRYVLSDSDDEAVSQDSDFDEDEASLDED 1490

[Close]

BLAST of CSPI03G29600 vs. NCBI nr
Match: XP_038905935.1 (DNA topoisomerase 2 [Benincasa hispida])

HSP 1 Score: 2652.5 bits (6874), Expect = 0.0e+00
Identity = 1370/1502 (91.21%), Postives = 1433/1502 (95.41%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNP-AGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNL 60
            M VEKKRPLQNSNAANVDS+P AGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNL
Sbjct: 1    MAVEKKRPLQNSNAANVDSDPAAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNL 60

Query: 61   WVYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNG 120
            WVYEN+KMVHRS+SYVPGLYKIFDEILVNAADNKQRDPSMDSVKV+IDVEQNCISVFNNG
Sbjct: 61   WVYENDKMVHRSVSYVPGLYKIFDEILVNAADNKQRDPSMDSVKVDIDVEQNCISVFNNG 120

Query: 121  DGVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETA 180
            DGVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFS+EFVIETA
Sbjct: 121  DGVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFVIETA 180

Query: 181  DGRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKK 240
            DG+R+KKYKQVFNDNMGKKSEPIITKCK GDNWT+VTFKPDL KFNMTHLEDDVVALMKK
Sbjct: 181  DGKRMKKYKQVFNDNMGKKSEPIITKCKGGDNWTKVTFKPDLAKFNMTHLEDDVVALMKK 240

Query: 241  RVLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIV 300
            RVLDLAGCLGKTVKVELNGQRVP++SFQDYVDLYLKSAS+ Q EPPKRYHI+PN+RWEIV
Sbjct: 241  RVLDLAGCLGKTVKVELNGQRVPIKSFQDYVDLYLKSASTFQTEPPKRYHIKPNDRWEIV 300

Query: 301  VTLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLW 360
            VTLSEGQFQQVSFVNGI+TIKGGTHV+YITNQI+N+VMTAVNKKNKNANVKAHNVK+YLW
Sbjct: 301  VTLSEGQFQQVSFVNGISTIKGGTHVDYITNQISNYVMTAVNKKNKNANVKAHNVKNYLW 360

Query: 361  VFINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQS 420
            VFINALIDNPSFDSQTKETLTKR+NSFGS CELTP+FLKNVATKSGIMDSVLSWVNFKQS
Sbjct: 361  VFINALIDNPSFDSQTKETLTKRSNSFGSTCELTPEFLKNVATKSGIMDSVLSWVNFKQS 420

Query: 421  KDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFY 480
            KDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFY
Sbjct: 421  KDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFY 480

Query: 481  GVFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDH 540
            GVFPLRGKLLNVREA+SKQITENKEIQYIKQILGLQQGKEYNNA+ALRYGHLMIMTDQDH
Sbjct: 481  GVFPLRGKLLNVREATSKQITENKEIQYIKQILGLQQGKEYNNAKALRYGHLMIMTDQDH 540

Query: 541  DGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESL 600
            DGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYE+WKESL
Sbjct: 541  DGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYESWKESL 600

Query: 601  RGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDR 660
            RGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDR
Sbjct: 601  RGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDR 660

Query: 661  KNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCS 720
            KNWLRQFEPGTHLDQT KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCS
Sbjct: 661  KNWLRQFEPGTHLDQTRKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCS 720

Query: 721  FKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTR 780
            FKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTR
Sbjct: 721  FKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTR 780

Query: 781  NHGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGS 840
            N GGKDHASSRYIYTKLSNVTRFLFP+DDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGS
Sbjct: 781  NQGGKDHASSRYIYTKLSNVTRFLFPKDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGS 840

Query: 841  EGIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTV 900
            EGIGTGWSSYVPNYNPRDII+NVRRML+G TMLPMDPWYRGFSGTIEKTATKEGGT+YTV
Sbjct: 841  EGIGTGWSSYVPNYNPRDIIKNVRRMLDGGTMLPMDPWYRGFSGTIEKTATKEGGTSYTV 900

Query: 901  SGIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHS 960
            SGIIEEVSDT LRIVELPVRRWT+DYKDFLDSVT+VA+KHDKDKEKAAK+PFIEQADHHS
Sbjct: 901  SGIIEEVSDTMLRIVELPVRRWTNDYKDFLDSVTKVATKHDKDKEKAAKEPFIEQADHHS 960

Query: 961  DDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEE 1020
            DDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEE
Sbjct: 961  DDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEE 1020

Query: 1021 FFPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKG 1080
            FFPLRL+FYEKRKR LL+NLEMELLKLENKVRFIL VVNEEI V NR+KVDLFHELQAKG
Sbjct: 1021 FFPLRLDFYEKRKRNLLENLEMELLKLENKVRFILGVVNEEIIVCNRRKVDLFHELQAKG 1080

Query: 1081 FTPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELC 1140
            FTPFPKK KSVEPE+AGAS+E DEAEESPEVVK  R+SDYEYLL+L IGTLTIEKVQELC
Sbjct: 1081 FTPFPKKNKSVEPEVAGASDEADEAEESPEVVKEARVSDYEYLLSLTIGTLTIEKVQELC 1140

Query: 1141 SDRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKP 1200
            ++RDKLKGEVDDLRKATPK+LWLNDLD LEKELDEMD NDAQ ME RK+QR+K N DLKP
Sbjct: 1141 NERDKLKGEVDDLRKATPKALWLNDLDSLEKELDEMDNNDAQAMEARKKQRDKLNNDLKP 1200

Query: 1201 KVSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKG 1260
            K+SRNAPKAPRN KKTSN E VTESMDTT+SSTT EVANNPVVKPKGKAAPRKAPA KKG
Sbjct: 1201 KISRNAPKAPRNGKKTSNAEPVTESMDTTFSSTTAEVANNPVVKPKGKAAPRKAPA-KKG 1260

Query: 1261 KAAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPA 1320
            KAAVLDDD DDEVLELKDRLAAYKIESSPEPSEVS METEV +V  QAAKKKEP+KRA A
Sbjct: 1261 KAAVLDDD-DDEVLELKDRLAAYKIESSPEPSEVS-METEVPQV--QAAKKKEPNKRAAA 1320

Query: 1321 KKKTTAKSAQISIS---DDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPP 1380
            KKKTTAKSAQ+S+S   DDD+D DFE+KEV PPA KKGGGR  GGGRKAAA N+KTTKPP
Sbjct: 1321 KKKTTAKSAQMSVSDDDDDDDDDDFEVKEVAPPATKKGGGR--GGGRKAAATNAKTTKPP 1380

Query: 1381 AAGAKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEEDENDD 1440
            AA AKLGQKLIT+MLEP AENSGISPEKKVRKIRASPFNKKSGS+LGRTIGEE+E+E ++
Sbjct: 1381 AAAAKLGQKLITEMLEP-AENSGISPEKKVRKIRASPFNKKSGSILGRTIGEEDEEEEEE 1440

Query: 1441 -----EGKLMGSASFETSEE----VQLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFD 1490
                 E K+MGSAS ET++E    V  ARGRS RANR TQVRYV+SD D E  S+DSD D
Sbjct: 1441 EESGIEEKVMGSASSETTKEEVAGVLPARGRSMRANR-TQVRYVVSDLDSETVSEDSDSD 1493

[Close]

BLAST of CSPI03G29600 vs. NCBI nr
Match: KAG7018075.1 (DNA topoisomerase 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 2622.0 bits (6795), Expect = 0.0e+00
Identity = 1356/1503 (90.22%), Postives = 1423/1503 (94.68%), Query Frame = 0


Query: 1    MVVEKKRPLQNSNAANVDSNPAGPKKTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 60
            M VEKKRPLQNSNAANVDS+PAGPKKTIEEMYQKK+QLEHILLRPDTYVGSIEKHTQNLW
Sbjct: 1    MAVEKKRPLQNSNAANVDSDPAGPKKTIEEMYQKKTQLEHILLRPDTYVGSIEKHTQNLW 60

Query: 61   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 120
            VYEN+KMVHRS++YVPGLYKIFDEILVNAADNKQRDPSMDS+KV ID EQN ISVFNNGD
Sbjct: 61   VYENDKMVHRSVTYVPGLYKIFDEILVNAADNKQRDPSMDSLKVVIDAEQNFISVFNNGD 120

Query: 121  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 180
            GVPVE+HQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFS+EFVIETAD
Sbjct: 121  GVPVEVHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSTEFVIETAD 180

Query: 181  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 240
            GRRLKKYKQVF+DNMGKKSEPIITKCK+GDNWT+VTFKPDL KFNMTHLEDDVVALMKKR
Sbjct: 181  GRRLKKYKQVFSDNMGKKSEPIITKCKEGDNWTKVTFKPDLAKFNMTHLEDDVVALMKKR 240

Query: 241  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVV 300
            VLDLAGCLGKTVKVELNGQRVPV+SFQDYVD YLKSA++ Q EPPKRYHIRPNERWEIVV
Sbjct: 241  VLDLAGCLGKTVKVELNGQRVPVKSFQDYVDFYLKSAAAFQTEPPKRYHIRPNERWEIVV 300

Query: 301  TLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLWV 360
            TLSEGQFQQVSFVNGIATIKGGTHV+YITNQIAN+VMT VNKKNKNANVKAHNVKSYLWV
Sbjct: 301  TLSEGQFQQVSFVNGIATIKGGTHVDYITNQIANYVMTVVNKKNKNANVKAHNVKSYLWV 360

Query: 361  FINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420
            FINALIDNP+FDSQTKETLT R +SFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK
Sbjct: 361  FINALIDNPAFDSQTKETLTIRQSSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSK 420

Query: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480
            DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG
Sbjct: 421  DLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYG 480

Query: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHD 540
            VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNA+ALRYGHLMIMTDQDHD
Sbjct: 481  VFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNAKALRYGHLMIMTDQDHD 540

Query: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPEYEAWKESLR 600
            GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATH+NGTVLSFYTMPEYEAWK++LR
Sbjct: 541  GSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHRNGTVLSFYTMPEYEAWKDNLR 600

Query: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIEDRK 660
            GNASGWSIKYYKGLGTSTSKEGREYFEQL KHKKDFIWQD++DGEAIELAFSKKKIE+RK
Sbjct: 601  GNASGWSIKYYKGLGTSTSKEGREYFEQLAKHKKDFIWQDEHDGEAIELAFSKKKIEERK 660

Query: 661  NWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720
            NWLRQFE GTHLDQ+ KLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF
Sbjct: 661  NWLRQFEAGTHLDQSEKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILFCSF 720

Query: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780
            KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN
Sbjct: 721  KRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFGTRN 780

Query: 781  HGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840
            HGGKDHASSRYIYTKLSN TRFLFP+DDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE
Sbjct: 781  HGGKDHASSRYIYTKLSNATRFLFPKDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVNGSE 840

Query: 841  GIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTYTVS 900
            GIGTGWSSY+PNYNPRDIIRNVRRML GE MLPMDPWYRGFSGTIEKTATKEGGT+YTVS
Sbjct: 841  GIGTGWSSYIPNYNPRDIIRNVRRMLNGEAMLPMDPWYRGFSGTIEKTATKEGGTSYTVS 900

Query: 901  GIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADHHSD 960
            GIIEEVSDTTLRI ELPVRRWT+DYKDFLDSVTRV++K+DKDKEKAAKDPFIEQADHHSD
Sbjct: 901  GIIEEVSDTTLRITELPVRRWTNDYKDFLDSVTRVSTKNDKDKEKAAKDPFIEQADHHSD 960

Query: 961  DKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020
            DK VSIDVHLTEENM+LA+QEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF
Sbjct: 961  DKTVSIDVHLTEENMILAMQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQILEEF 1020

Query: 1021 FPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQAKGF 1080
            FPLRLEF+EKRKR LL+NLE ELLKLENKVRFILAVVN EI VSNR++VDLFHELQ KGF
Sbjct: 1021 FPLRLEFFEKRKRNLLENLETELLKLENKVRFILAVVNGEIIVSNRRRVDLFHELQEKGF 1080

Query: 1081 TPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERISDYEYLLALPIGTLTIEKVQELCS 1140
            TPFPKKTKSVEPE+AGASNETDEAEESPEVVKGER+SDYEYLLAL IGTLTIEKVQELC+
Sbjct: 1081 TPFPKKTKSVEPEVAGASNETDEAEESPEVVKGERVSDYEYLLALAIGTLTIEKVQELCN 1140

Query: 1141 DRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMELRKQQREKANIDLKPK 1200
            +RDK KGEV++LRKATPKSLWL DLDYLEKELDEMDRNDAQ  E+RKQQR K N D+KPK
Sbjct: 1141 ERDKFKGEVEELRKATPKSLWLKDLDYLEKELDEMDRNDAQADEVRKQQRIKNN-DIKPK 1200

Query: 1201 VSRNAPKAPRNSKKTSNVETVTESMD-TTYSSTTTEVANNPVVKPKGKAAPRKAPAKKKG 1260
            +SRNAPKAPRNSKKTSN ET+TESMD TT SSTTTEVANNPVVKPKGKAAPRKAPAKK+G
Sbjct: 1201 ISRNAPKAPRNSKKTSNSETITESMDITTSSSTTTEVANNPVVKPKGKAAPRKAPAKKQG 1260

Query: 1261 KAAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQAAKKKEPSKRAPA 1320
            KAAVLDDD+DDEVLELKDRLAAYK+ESSPEPSEVSAMETEV +V Q AAKKKEPSKRA A
Sbjct: 1261 KAAVLDDDDDDEVLELKDRLAAYKLESSPEPSEVSAMETEVPKV-QAAAKKKEPSKRAAA 1320

Query: 1321 KKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAAGNSKTTKPPAAG 1380
            KKKTTAKSAQ  ISDD +DGDFEIKE+ PPAAKKGGGR      K     +KTTK     
Sbjct: 1321 KKKTTAKSAQ--ISDDSDDGDFEIKEIAPPAAKKGGGRKAAANAKTTK-TTKTTKKQEPV 1380

Query: 1381 AKLGQKLITQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRTIGEEEE--DENDDE 1440
            A+LGQKLITQMLEP  ENSGISPEKKVRKIR SPFNKKSGS+LGR IGEEEE  +E  +E
Sbjct: 1381 ARLGQKLITQMLEP-TENSGISPEKKVRKIRESPFNKKSGSMLGRKIGEEEEEVEEAGNE 1440

Query: 1441 GKLMGSASFETSEE----VQLARGRSRRANRTTQVRYVLSDSDGEVASQDSDFDEDEASL 1497
            GK+MGSAS ET++E    V LARGRS+R NR TQVRYV+SDSD E   +DSDFDE EA+L
Sbjct: 1441 GKMMGSASSETTDEEVARVPLARGRSQRTNR-TQVRYVVSDSDSEPVYEDSDFDE-EANL 1495

[Close]

BLAST of CSPI03G29600 vs. TAIR 10
Match: AT3G23890.2 (topoisomerase II )

HSP 1 Score: 1773.4 bits (4592), Expect = 0.0e+00
Identity = 960/1511 (63.53%), Postives = 1156/1511 (76.51%), Query Frame = 0


Query: 6    KRPLQNSNAANVDSNPAGPK-----KTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 65
            K PLQNSNAANV   PA  +     KTIEEMYQKKSQLEHILLRPDTY+GSIEKHTQ LW
Sbjct: 4    KLPLQNSNAANVAKAPAKSRAAAGGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQTLW 63

Query: 66   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 125
            VYE ++MV R ++YVPGLYKIFDEILVNAADNKQRD  MDSV+V IDVEQN ISV N+G 
Sbjct: 64   VYEKDEMVQRPVTYVPGLYKIFDEILVNAADNKQRDAKMDSVQVVIDVEQNLISVCNSGA 123

Query: 126  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 185
            GVPVEIHQEE +YVPE+IFGHLLTSSNYDD  KKTTGGRNGYGAKLTNIFS+EF+IETAD
Sbjct: 124  GVPVEIHQEEGIYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 183

Query: 186  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 245
            G+RLKKYKQVF +NMGKKSEP+ITKC   +NWT+VTFKPDL+KFNMT LEDDVVALM KR
Sbjct: 184  GKRLKKYKQVFENNMGKKSEPVITKCNKSENWTKVTFKPDLKKFNMTELEDDVVALMSKR 243

Query: 246  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPP-KRYHIRPNERWEIV 305
            V D+AGCLGK+VKVELNG+++PV+SF DYVDLYL +A+  + E P  R   + N+RWE+ 
Sbjct: 244  VFDIAGCLGKSVKVELNGKQIPVKSFTDYVDLYLSAANKSRTEDPLPRLTEKVNDRWEVC 303

Query: 306  VTLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLW 365
            V+LSEGQFQQVSFVN IATIKGGTHV+Y+T+QI N ++ AVNKKNKNANVKAHNVK++LW
Sbjct: 304  VSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNHLW 363

Query: 366  VFINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQS 425
            VF+NALIDNP+FDSQTKETLT R +SFGS CEL+ DFLK V  KSG+++++LSW +FKQ+
Sbjct: 364  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVG-KSGVVENLLSWADFKQN 423

Query: 426  KDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFY 485
            KDLKK+DGAKT ++  +EKL+DA  AGGKNS  CTLILTEGDSAK+LA+AG  V+G ++ 
Sbjct: 424  KDLKKSDGAKTGRVL-VEKLDDAAEAGGKNSRLCTLILTEGDSAKSLALAGRSVLGNNYC 483

Query: 486  GVFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDH 545
            GVFPLRGKLLNVREAS+ QIT NKEI+ +K+ILGL+Q  +Y N  +LRYG +MIMTDQDH
Sbjct: 484  GVFPLRGKLLNVREASTTQITNNKEIENLKKILGLKQNMKYENVNSLRYGQMMIMTDQDH 543

Query: 546  DGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGT--VLSFYTMPEYEAWKE 605
            DGSHIKGLLINFIHSFWPSLL+VPSFLVEFITPIVKAT K GT  VLSFY+MPEYE WKE
Sbjct: 544  DGSHIKGLLINFIHSFWPSLLQVPSFLVEFITPIVKATRK-GTKKVLSFYSMPEYEEWKE 603

Query: 606  SLRGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIE 665
            SL+GNA+GW IKYYKGLGTST++EG+EYF  L  HKKDF+W+D+ DGEAIELAFSKKKIE
Sbjct: 604  SLKGNATGWDIKYYKGLGTSTAEEGKEYFSNLGLHKKDFVWEDEQDGEAIELAFSKKKIE 663

Query: 666  DRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 725
             RKNWL  + PG HLDQ    + YSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF
Sbjct: 664  ARKNWLSSYVPGNHLDQRQPKVTYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 723

Query: 726  CSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFG 785
             +FK+   KE KV+Q  GYVS  SAYHHGEQSLAS IIGMAQD+VGSNNINLLLPNGQFG
Sbjct: 724  VAFKKIARKEMKVAQLVGYVSLLSAYHHGEQSLASAIIGMAQDYVGSNNINLLLPNGQFG 783

Query: 786  TRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVN 845
            TR  GGKD AS+RYI+TKLS VTR LFP+DDD LL+YLNEDGQ IEPTWYMPIIPTVLVN
Sbjct: 784  TRTSGGKDSASARYIFTKLSPVTRILFPKDDDLLLDYLNEDGQRIEPTWYMPIIPTVLVN 843

Query: 846  GSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTY 905
            G+EGIGTGWS+++PNYNPR+I+ NVRR+L GE+M+PMDPWYRGF GTIEKTA+KEGG TY
Sbjct: 844  GAEGIGTGWSTFIPNYNPREIVANVRRLLNGESMVPMDPWYRGFKGTIEKTASKEGGCTY 903

Query: 906  TVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADH 965
            T++G+ EEV +TT+RI ELP+RRW  DYK+FL S+     K D         PF +    
Sbjct: 904  TITGLYEEVDETTIRITELPIRRWNDDYKNFLQSL-----KTDNGA------PFFQDVKA 963

Query: 966  HSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQIL 1025
            ++D+K V  D+ L+EENML A QEG  KKFKLTTT++TSNMHLFD  GVIKKY TPEQIL
Sbjct: 964  YNDEKSVDFDLILSEENMLAARQEGFLKKFKLTTTIATSNMHLFDKKGVIKKYVTPEQIL 1023

Query: 1026 EEFFPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQA 1085
            EEFF LR E+YEKRK  ++ N+E+ELLKLENK RFILAV++ EI V+ RKK D+  +L+ 
Sbjct: 1024 EEFFDLRFEYYEKRKETVVKNMEIELLKLENKARFILAVLSGEIIVNKRKKADIVEDLRQ 1083

Query: 1086 KGFTPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERI-------SDYEYLLALPIGTL 1145
            KGFTPFP+K +SVE  IAGA ++ D AEE  E++            S+Y+YLLA+ I +L
Sbjct: 1084 KGFTPFPRKAESVEAAIAGAVDD-DAAEEPEEILVDPESSSSYIPGSEYDYLLAMAIASL 1143

Query: 1146 TIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMEL--RKQ 1205
            TIEKV+EL +DRDK+   V D++K TPKSLWL+DL+ L+KEL+++D  DAQ  +     Q
Sbjct: 1144 TIEKVEELLADRDKMIIAVADMKKTTPKSLWLSDLESLDKELEKLDLKDAQVQQAIEAAQ 1203

Query: 1206 QREKANIDLKPKVSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGK- 1265
            ++ +A      KV R APK P   KKT+   + +E+ + +YS+  T+     VVKPKG+ 
Sbjct: 1204 KKIRAKSGAAVKVKRQAPKKPA-PKKTTKKASESETTEASYSAMDTDNNVAEVVKPKGRQ 1263

Query: 1266 AAPRKAPAKKKGKAAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQA 1325
             A +KAPA  K       + E+DE+L+L  RLA Y   S+P  S                
Sbjct: 1264 GAKKKAPAAAK-------EVEEDEMLDLAQRLAQYNFGSAPADS---------------- 1323

Query: 1326 AKKKEPSKRAPAKKKTTAKSAQISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAAA 1385
                          KT   S  I++ DDD+D   E+  V     KK       GGRK AA
Sbjct: 1324 -------------SKTAETSKAIAVDDDDDDVVVEVAPV-----KK-------GGRKPAA 1383

Query: 1386 GNSKTTKPPAAGAKLGQKLI--TQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGRT 1445
              +K  KPPAA  K G++ +  T++L       G+SPEKKVRK+R+SPFNKKS S++ R 
Sbjct: 1384 --TKAAKPPAAPRKRGKQTVASTEVLA-----IGVSPEKKVRKMRSSPFNKKSSSVMSRL 1438

Query: 1446 IGEEEEDENDDEGKLMGSASFETSEEVQLARGRSRRANRTTQVRYVLSDSDGEVASQDSD 1497
               +EE+ +++   + G++S E S     A  R +RANR  ++ YVLSDS+ E A+ DS+
Sbjct: 1444 ADNKEEESSEN---VAGNSSSEKSGGDVSAISRPQRANR-RKMTYVLSDSESESAN-DSE 1438

[Close]

BLAST of CSPI03G29600 vs. TAIR 10
Match: AT3G23890.1 (topoisomerase II )

HSP 1 Score: 1759.6 bits (4556), Expect = 0.0e+00
Identity = 956/1512 (63.23%), Postives = 1163/1512 (76.92%), Query Frame = 0


Query: 6    KRPLQNSNAANVDSNPAGPK-----KTIEEMYQKKSQLEHILLRPDTYVGSIEKHTQNLW 65
            K PLQNSNAANV   PA  +     KTIEEMYQKKSQLEHILLRPDTY+GSIEKHTQ LW
Sbjct: 4    KLPLQNSNAANVAKAPAKSRAAAGGKTIEEMYQKKSQLEHILLRPDTYIGSIEKHTQTLW 63

Query: 66   VYENEKMVHRSISYVPGLYKIFDEILVNAADNKQRDPSMDSVKVNIDVEQNCISVFNNGD 125
            VYE ++MV R ++YVPGLYKIFDEILVNAADNKQRD  MDSV+V IDVEQN ISV N+G 
Sbjct: 64   VYEKDEMVQRPVTYVPGLYKIFDEILVNAADNKQRDAKMDSVQVVIDVEQNLISVCNSGA 123

Query: 126  GVPVEIHQEEKVYVPELIFGHLLTSSNYDDTEKKTTGGRNGYGAKLTNIFSSEFVIETAD 185
            GVPVEIHQEE +YVPE+IFGHLLTSSNYDD  KKTTGGRNGYGAKLTNIFS+EF+IETAD
Sbjct: 124  GVPVEIHQEEGIYVPEMIFGHLLTSSNYDDNVKKTTGGRNGYGAKLTNIFSTEFIIETAD 183

Query: 186  GRRLKKYKQVFNDNMGKKSEPIITKCKDGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKR 245
            G+RLKKYKQVF +NMGKKSEP+ITKC   +NWT+VTFKPDL+KFNMT LEDDVVALM KR
Sbjct: 184  GKRLKKYKQVFENNMGKKSEPVITKCNKSENWTKVTFKPDLKKFNMTELEDDVVALMSKR 243

Query: 246  VLDLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPP-KRYHIRPNERWEIV 305
            V D+AGCLGK+VKVELNG+++PV+SF DYVDLYL +A+  + E P  R   + N+RWE+ 
Sbjct: 244  VFDIAGCLGKSVKVELNGKQIPVKSFTDYVDLYLSAANKSRTEDPLPRLTEKVNDRWEVC 303

Query: 306  VTLSEGQFQQVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHNVKSYLW 365
            V+LSEGQFQQVSFVN IATIKGGTHV+Y+T+QI N ++ AVNKKNKNANVKAHNVK++LW
Sbjct: 304  VSLSEGQFQQVSFVNSIATIKGGTHVDYVTSQITNHIVAAVNKKNKNANVKAHNVKNHLW 363

Query: 366  VFINALIDNPSFDSQTKETLTKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQS 425
            VF+NALIDNP+FDSQTKETLT R +SFGS CEL+ DFLK V  KSG+++++LSW +FKQ+
Sbjct: 364  VFVNALIDNPAFDSQTKETLTLRQSSFGSKCELSEDFLKKVG-KSGVVENLLSWADFKQN 423

Query: 426  KDLKKTDGAKTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFY 485
            KDLKK+DGAKT ++  +EKL+DA  AGGKNS  CTLILTEGDSAK+LA+AG  V+G ++ 
Sbjct: 424  KDLKKSDGAKTGRVL-VEKLDDAAEAGGKNSRLCTLILTEGDSAKSLALAGRSVLGNNYC 483

Query: 486  GVFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDH 545
            GVFPLRGKLLNVREAS+ QIT NKEI+ +K+ILGL+Q  +Y N  +LRYG +MIMTDQDH
Sbjct: 484  GVFPLRGKLLNVREASTTQITNNKEIENLKKILGLKQNMKYENVNSLRYGQMMIMTDQDH 543

Query: 546  DGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGT--VLSFYTMPEYEAWKE 605
            DGSHIKGLLINFIHSFWPSLL+VPSFLVEFITPIVKAT K GT  VLSFY+MPEYE WKE
Sbjct: 544  DGSHIKGLLINFIHSFWPSLLQVPSFLVEFITPIVKATRK-GTKKVLSFYSMPEYEEWKE 603

Query: 606  SLRGNASGWSIKYYKGLGTSTSKEGREYFEQLTKHKKDFIWQDDNDGEAIELAFSKKKIE 665
            SL+GNA+GW IKYYKGLGTST++EG+EYF  L  HKKDF+W+D+ DGEAIELAFSKKKIE
Sbjct: 604  SLKGNATGWDIKYYKGLGTSTAEEGKEYFSNLGLHKKDFVWEDEQDGEAIELAFSKKKIE 663

Query: 666  DRKNWLRQFEPGTHLDQTGKLIKYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 725
             RKNWL  + PG HLDQ    + YSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF
Sbjct: 664  ARKNWLSSYVPGNHLDQRQPKVTYSDFVNKELILFSMADLQRSIPSMVDGLKPGQRKILF 723

Query: 726  CSFKRNFIKEAKVSQFSGYVSEHSAYHHGEQSLASTIIGMAQDFVGSNNINLLLPNGQFG 785
             +FK+   KE KV+Q  GYVS  SAYHHGEQSLAS IIGMAQD+VGSNNINLLLPNGQFG
Sbjct: 724  VAFKKIARKEMKVAQLVGYVSLLSAYHHGEQSLASAIIGMAQDYVGSNNINLLLPNGQFG 783

Query: 786  TRNHGGKDHASSRYIYTKLSNVTRFLFPRDDDKLLNYLNEDGQSIEPTWYMPIIPTVLVN 845
            TR  GGKD AS+RYI+TKLS VTR LFP+DDD LL+YLNEDGQ IEPTWYMPIIPTVLVN
Sbjct: 784  TRTSGGKDSASARYIFTKLSPVTRILFPKDDDLLLDYLNEDGQRIEPTWYMPIIPTVLVN 843

Query: 846  GSEGIGTGWSSYVPNYNPRDIIRNVRRMLEGETMLPMDPWYRGFSGTIEKTATKEGGTTY 905
            G+EGIGTGWS+++PNYNPR+I+ NVRR+L GE+M+PMDPWYRGF GTIEKTA+KEGG TY
Sbjct: 844  GAEGIGTGWSTFIPNYNPREIVANVRRLLNGESMVPMDPWYRGFKGTIEKTASKEGGCTY 903

Query: 906  TVSGIIEEVSDTTLRIVELPVRRWTSDYKDFLDSVTRVASKHDKDKEKAAKDPFIEQADH 965
            T++G+ EEV +TT+RI ELP+RRW  DYK+FL S+     K D         PF +    
Sbjct: 904  TITGLYEEVDETTIRITELPIRRWNDDYKNFLQSL-----KTDNGA------PFFQDVKA 963

Query: 966  HSDDKIVSIDVHLTEENMLLAIQEGLKKKFKLTTTVSTSNMHLFDANGVIKKYDTPEQIL 1025
            ++D+K V  D+ L+EENML A QEG  KKFKLTTT++TSNMHLFD  GVIKKY TPEQIL
Sbjct: 964  YNDEKSVDFDLILSEENMLAARQEGFLKKFKLTTTIATSNMHLFDKKGVIKKYVTPEQIL 1023

Query: 1026 EEFFPLRLEFYEKRKRILLDNLEMELLKLENKVRFILAVVNEEIKVSNRKKVDLFHELQA 1085
            EEFF LR E+YEKRK  ++ N+E+ELLKLENK RFILAV++ EI V+ RKK D+  +L+ 
Sbjct: 1024 EEFFDLRFEYYEKRKETVVKNMEIELLKLENKARFILAVLSGEIIVNKRKKADIVEDLRQ 1083

Query: 1086 KGFTPFPKKTKSVEPEIAGASNETDEAEESPEVVKGERI-------SDYEYLLALPIGTL 1145
            KGFTPFP+K +SVE  IAGA ++ D AEE  E++            S+Y+YLLA+ I +L
Sbjct: 1084 KGFTPFPRKAESVEAAIAGAVDD-DAAEEPEEILVDPESSSSYIPGSEYDYLLAMAIASL 1143

Query: 1146 TIEKVQELCSDRDKLKGEVDDLRKATPKSLWLNDLDYLEKELDEMDRNDAQTMEL--RKQ 1205
            TIEKV+EL +DRDK+   V D++K TPKSLWL+DL+ L+KEL+++D  DAQ  +     Q
Sbjct: 1144 TIEKVEELLADRDKMIIAVADMKKTTPKSLWLSDLESLDKELEKLDLKDAQVQQAIEAAQ 1203

Query: 1206 QREKANIDLKPKVSRNAPKAPRNSKKTSNVETVTESMDTTYSSTTTEVANNPVVKPKGK- 1265
            ++ +A      KV R APK P   KKT+   + +E+ + +YS+  T+     VVKPK + 
Sbjct: 1204 KKIRAKSGAAVKVKRQAPKKPA-PKKTTKKASESETTEASYSAMDTDNNVAEVVKPKARQ 1263

Query: 1266 AAPRKAPAKKKGKAAVLDDDEDDEVLELKDRLAAYKIESSPEPSEVSAMETEVQEVQQQA 1325
             A +KA   +  +A+    D D+ V E+         +     +     E E+ ++ Q+ 
Sbjct: 1264 GAKKKASESETTEASHSAMDTDNNVAEVVKPKGRQGAKKKAPAAAKEVEEDEMLDLAQRL 1323

Query: 1326 AKKKEPSKRAPAKKKTTAKSAQ-ISISDDDNDGDFEIKEVDPPAAKKGGGRGGGGGRKAA 1385
            A+    S  APA    TA++++ I++ DDD+D   E+  V     KK       GGRK A
Sbjct: 1324 AQYNFGS--APADSSKTAETSKAIAVDDDDDDVVVEVAPV-----KK-------GGRKPA 1383

Query: 1386 AGNSKTTKPPAAGAKLGQKLI--TQMLEPAAENSGISPEKKVRKIRASPFNKKSGSLLGR 1445
            A  +K  KPPAA  K G++ +  T++L       G+SPEKKVRK+R+SPFNKKS S++ R
Sbjct: 1384 A--TKAAKPPAAPRKRGKQTVASTEVLA-----IGVSPEKKVRKMRSSPFNKKSSSVMSR 1443

Query: 1446 TIGEEEEDENDDEGKLMGSASFETSEEVQLARGRSRRANRTTQVRYVLSDSDGEVASQDS 1497
                +EE+ +++   + G++S E S     A  R +RANR  ++ YVLSDS+ E A+ DS
Sbjct: 1444 LADNKEEESSEN---VAGNSSSEKSGGDVSAISRPQRANR-RKMTYVLSDSESESAN-DS 1473

[Close]

BLAST of CSPI03G29600 vs. TAIR 10
Match: AT5G04130.1 (DNA GYRASE B2 )

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28
Identity = 155/624 (24.84%), Postives = 257/624 (41.19%), Query Frame = 0


Query: 30  EMYQKKSQLEHILLRPDTYVGSIEKHTQNLWVYENEKMVHRSISYVPGLYKIFDEILVNA 89
           E  Q    L+ +  RP  Y+GS                         GL+ +  EIL NA
Sbjct: 94  EQIQVLEGLDPVRKRPGMYIGSTGSR---------------------GLHHLVYEILDNA 153

Query: 90  ADNKQRDPSMDSVKVNIDVE-QNCISVFNNGDGVPVEIHQEEKVYVPELIFGHLLTSSNY 149
            D  Q   +    KV++ +     +SV +NG G+P ++H   K    E +   L     +
Sbjct: 154 IDEAQAGYAS---KVDVVLHADGSVSVVDNGRGIPTDLHPATKKSSLETVLTVLHAGGKF 213

Query: 150 DDTEK--KTTGGRNGYGAKLTNIFSSEFVIETADGRRLKKYKQVFNDNMGKKSEPIIT-K 209
             T      +GG +G G  + N  S    +E +  R   ++KQ ++     + +PI T  
Sbjct: 214 GGTSSGYSVSGGLHGVGLSVVNALSE--ALEVSVWRDGMEHKQNYS-----RGKPITTLT 273

Query: 210 CK------DGDNWTRVTFKPDLEKFNMTHLEDDVVALMKKRVLDLAGCLGKTVKVELNGQ 269
           C+       G   T + F PD E F  T +E D   +   R+ +LA  L   V + L  +
Sbjct: 274 CRVLPLESKGTKGTSIRFWPDKEVFT-TAIEFDHNTI-AGRIRELA-FLNPKVTISLKKE 333

Query: 270 RVPVRSFQ-----------DYVDLYLKSASSIQAEPPKRYHIRPNERWEIVVTLSEGQFQ 329
                  Q           +YV       + I      R  I      ++ +      + 
Sbjct: 334 DDDPEKTQYSEYSFAGGLTEYVSWLNTDKNPIHDVLGFRREIN-GATVDVALQWCSDAYS 393

Query: 330 --QVSFVNGIATIKGGTHVEYITNQIANFVMTAVNK----KNKNANVKAHNVKSYLWVFI 389
              + + N I TI GGTH+E +   +   + T   K    K K+ ++   +V+  L   +
Sbjct: 394 DTMLGYANSIRTIDGGTHIEGVKASLTRTLNTLAKKSKTVKEKDISLSGEHVREGLTCIV 453

Query: 390 NALIDNPSFDSQTKETL----------TKRANSFGSACELTPDFLKNVATKSGIMDSVLS 449
           +  + NP F+ QTK  L                     EL PD L+++ +KS  +++  +
Sbjct: 454 SVKVPNPEFEGQTKTRLGNPEVRKIVDQSVQEYLTEFLELHPDILESIISKS--LNAYKA 513

Query: 450 WVNFKQSKDLKKTDGA-KTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGL 509
            +  K++++L ++    K+  + G  KL D +    + SE   + + EGDSA   A  G 
Sbjct: 514 ALAAKRARELVRSKSVLKSSSLPG--KLADCSSTDPEVSE---IFIVEGDSAGGSAKQGR 573

Query: 510 GVVGRDFYGVFPLRGKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHL 569
               R F  + PLRGK+LN+       + +N+EIQ +   LGL    E      LRY  +
Sbjct: 574 ---DRRFQAILPLRGKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFKKENLRYHKI 633

Query: 570 MIMTDQDHDGSHIKGLLINFIHSFWPSLLRVPSFLVEFITPIVKATHKNGTVLSFYTMPE 616
           +I+TD D DG+HI+ LL+ F   +  +L       V  + P+ K   +       Y   +
Sbjct: 634 IILTDADVDGAHIRTLLLTFFFRYQRALFDAGCIYVG-VPPLFK-VERGKNAQYCYDDAD 669

[Close]

BLAST of CSPI03G29600 vs. TAIR 10
Match: AT3G10270.1 (DNA GYRASE B1 )

HSP 1 Score: 110.9 bits (276), Expect = 8.8e-24
Identity = 148/610 (24.26%), Postives = 243/610 (39.84%), Query Frame = 0


Query: 77  GLYKIFDEILVNAADNKQRDPSMDSVKVNIDV---EQNCISVFNNGDGVPVEIHQEEKVY 136
           GL+ +  EIL NA D  Q           IDV     + +S+ +NG G+P ++H      
Sbjct: 128 GLHHLVYEILDNAIDEAQA-----GFASKIDVVLHSDDSVSISDNGRGIPTDLHPATGKS 187

Query: 137 VPELIFGHLLTSSNYDDTEK--KTTGGRNGYGAKLTNIFSSEF-VIETADGRRLKKYKQV 196
             E +   L     +         +GG +G G  + N  S    VI   DG    +++Q 
Sbjct: 188 SLETVLTVLHAGGKFGGKSSGYSVSGGLHGVGLSVVNALSEALEVIVRRDG---MEFQQK 247

Query: 197 FNDNMGKKSEPIIT-KC------KDGDNWTRVTFKPDLEKFNMT-HLEDDVVALMKKRVL 256
           ++     + +P+ T  C        G   T + F PD E F      + + +A   + + 
Sbjct: 248 YS-----RGKPVTTLTCHVLPPESRGTQGTCIRFWPDKEVFTTAIQFDHNTIAGRIRELA 307

Query: 257 DLAGCLGKTVKVELNGQRVPVRSFQDYVDLYLKSASSIQAEPPKRYHIRPNERWEIVVTL 316
            L   +  ++K E +     V S   Y     +  S +  +  K  H     R EI  + 
Sbjct: 308 FLNPKVTISLKKEDDDPERDVYSEYFYAGGLTEYVSWLNTD-KKPLHDVLGFRKEINGST 367

Query: 317 SEGQFQ---------QVSFVNGIATIKGGTHVEYITNQIANFVMTAVNKKNKNANVKAHN 376
            +   Q          + + N I TI GGTH+E +   +    + ++ KK K   VK + 
Sbjct: 368 VDVSLQWCSDAYSDTMLGYANSIRTIDGGTHIEGVKASLTR-TLNSLAKKLKVIKVKGYI 427

Query: 377 VKSYLWV-------------------------------------FINALIDNPSFDSQTK 436
           + S  W+                                      ++  + NP F+ QTK
Sbjct: 428 IYSSPWIETKFKYSSALKRHALRTINNEKDISLSGEHVREGLTCIVSVKVPNPEFEGQTK 487

Query: 437 ETL----------TKRANSFGSACELTPDFLKNVATKSGIMDSVLSWVNFKQSKDLKKTD 496
             L                     EL PD L+++ +KS  +++  + +  K++++L ++ 
Sbjct: 488 TRLGNPEVRKIVDQSVQEYLTEYLELHPDVLESIISKS--LNAYKAALAAKRARELVRSK 547

Query: 497 GA-KTEKISGIEKLEDANCAGGKNSEKCTLILTEGDSAKALAMAGLGVVGRDFYGVFPLR 556
              K+  + G  KL D +      SE   + + EGDSA   A  G     R F  + PLR
Sbjct: 548 SVLKSSSLPG--KLADCSSTDPAESE---IFIVEGDSAGGSAKQGR---DRRFQAILPLR 607

Query: 557 GKLLNVREASSKQITENKEIQYIKQILGLQQGKEYNNARALRYGHLMIMTDQDHDGSHIK 616
           GK+LN+       + +N+EIQ +   LGL    E  N   LRY  ++I+TD D DG+HI+
Sbjct: 608 GKILNIERKDEAAMYKNEEIQNLILGLGLGVKGEDFNKENLRYHKIIILTDADVDGAHIR 667

The following BLAST results are available for this feature:

BLAST of CSPI03G29600 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30182	0.0e+00	63.23	DNA topoisomerase 2 OS=Arabidopsis thaliana OX=3702 GN=TOP2 PE=2 SV=2	[more]
O24308	0.0e+00	62.27	DNA topoisomerase 2 OS=Pisum sativum OX=3888 GN=TOP2 PE=2 SV=1	[more]
P08096	0.0e+00	47.57	DNA topoisomerase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=28...	[more]
Q55BP5	0.0e+00	47.03	Probable DNA topoisomerase 2 OS=Dictyostelium discoideum OX=44689 GN=top2 PE=3 S...	[more]
P11388	0.0e+00	46.83	DNA topoisomerase 2-alpha OS=Homo sapiens OX=9606 GN=TOP2A PE=1 SV=3	[more]

BLAST of CSPI03G29600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEU2	0.0e+00	98.50	DNA topoisomerase 2 OS=Cucumis sativus OX=3659 GN=Csa_3G690290 PE=3 SV=1	[more]
A0A5A7TZH5	0.0e+00	96.20	DNA topoisomerase 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1871...	[more]
A0A1S3CFK5	0.0e+00	96.20	DNA topoisomerase 2 OS=Cucumis melo OX=3656 GN=LOC103500322 PE=3 SV=1	[more]
A0A6J1F9E0	0.0e+00	90.22	DNA topoisomerase 2 OS=Cucurbita moschata OX=3662 GN=LOC111442005 PE=3 SV=1	[more]
A0A6J1F3D6	0.0e+00	90.22	DNA topoisomerase 2 OS=Cucurbita moschata OX=3662 GN=LOC111442005 PE=3 SV=1	[more]

BLAST of CSPI03G29600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651769.2	0.0e+00	99.67	DNA topoisomerase 2 [Cucumis sativus] >KAE8650929.1 hypothetical protein Csa_002...	[more]
KAA0048368.1	0.0e+00	96.20	DNA topoisomerase 2 [Cucumis melo var. makuwa] >TYK04068.1 DNA topoisomerase 2 [...	[more]
XP_008461811.1	0.0e+00	96.20	PREDICTED: DNA topoisomerase 2 [Cucumis melo]	[more]
XP_038905935.1	0.0e+00	91.21	DNA topoisomerase 2 [Benincasa hispida]	[more]
KAG7018075.1	0.0e+00	90.22	DNA topoisomerase 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CSPI03G29600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23890.2	0.0e+00	63.53	topoisomerase II	[more]
AT3G23890.1	0.0e+00	63.23	topoisomerase II	[more]
AT5G04130.1	1.6e-28	24.84	DNA GYRASE B2	[more]
AT3G10270.1	8.8e-24	24.26	DNA GYRASE B1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1029..1056
None	No IPR available	COILS	Coil	Coil	coord: 1135..1155
None	No IPR available	PRINTS	PR00418	TPI2FAMILY	coord: 114..127 score: 52.35 coord: 77..92 score: 57.93 coord: 455..469 score: 59.35 coord: 608..624 score: 52.94 coord: 157..171 score: 60.73 coord: 525..541 score: 62.7 coord: 543..560 score: 51.9 coord: 564..576 score: 36.3 coord: 311..324 score: 65.77
None	No IPR available	GENE3D	3.30.1360.40		coord: 881..996 e-value: 2.8E-137 score: 458.9
None	No IPR available	GENE3D	3.30.1490.30		coord: 572..617 e-value: 1.3E-119 score: 400.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1198..1254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1086..1110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1208..1239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR10169:SF38	DNA TOPOISOMERASE 2	coord: 25..1224
None	No IPR available	PANTHER	PTHR10169	DNA TOPOISOMERASE/GYRASE	coord: 25..1224
None	No IPR available	CDD	cd16930	HATPase_TopII-like	coord: 74..220 e-value: 5.62124E-92 score: 290.394
None	No IPR available	CDD	cd03481	TopoIIA_Trans_ScTopoIIA	coord: 264..416 e-value: 3.73568E-64 score: 212.532
IPR001154	DNA topoisomerase II, eukaryotic-type	PRINTS	PR01158	TOPISMRASEII	coord: 614..626 score: 71.88 coord: 453..460 score: 94.83 coord: 774..796 score: 71.36 coord: 544..559 score: 79.09 coord: 913..927 score: 60.69 coord: 804..824 score: 53.86 coord: 501..514 score: 54.93 coord: 438..448 score: 72.41 coord: 565..576 score: 77.01 coord: 727..750 score: 65.8 coord: 1005..1031 score: 51.72
IPR002205	DNA topoisomerase, type IIA, subunit A/C-terminal	SMART	SM00434	topIV4	coord: 679..1163 e-value: 6.7E-192 score: 653.5
IPR002205	DNA topoisomerase, type IIA, subunit A/C-terminal	PFAM	PF00521	DNA_topoisoIV	coord: 699..1166 e-value: 2.1E-123 score: 412.3
IPR002205	DNA topoisomerase, type IIA, subunit A/C-terminal	CDD	cd00187	TOP4c	coord: 698..1166 e-value: 1.39753E-145 score: 446.243
IPR001241	DNA topoisomerase, type IIA	SMART	SM00433	topII5	coord: 77..668 e-value: 3.9E-299 score: 1009.7
IPR003594	Histidine kinase/HSP90-like ATPase	PFAM	PF02518	HATPase_c	coord: 76..222 e-value: 2.4E-11 score: 44.1
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	GENE3D	3.30.565.10		coord: 35..277 e-value: 6.9E-100 score: 335.5
IPR036890	Histidine kinase/HSP90-like ATPase superfamily	SUPERFAMILY	55874	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	coord: 28..263
IPR006171	TOPRIM domain	PFAM	PF01751	Toprim	coord: 455..553 e-value: 7.4E-9 score: 35.8
IPR006171	TOPRIM domain	PROSITE	PS50880	TOPRIM	coord: 453..567 score: 17.959259
IPR013759	DNA topoisomerase, type IIA, subunit B, C-terminal	GENE3D	3.40.50.670		coord: 439..700 e-value: 1.3E-119 score: 400.3
IPR031660	C-terminal associated domain of TOPRIM	PFAM	PF16898	TOPRIM_C	coord: 569..696 e-value: 1.1E-51 score: 174.5
IPR013506	DNA topoisomerase, type IIA, subunit B, domain 2	PFAM	PF00204	DNA_gyraseB	coord: 266..424 e-value: 2.9E-23 score: 82.2
IPR013758	DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta	GENE3D	3.90.199.10	Topoisomerase II, domain 5	coord: 701..1010 e-value: 2.8E-137 score: 458.9
IPR013757	Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily	GENE3D	1.10.268.10	Topoisomerase, domain 3	coord: 1013..1183 e-value: 1.1E-47 score: 163.7
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 288..410 e-value: 7.8E-38 score: 130.5
IPR018522	DNA topoisomerase, type IIA, conserved site	PROSITE	PS00177	TOPOISOMERASE_II	coord: 457..465
IPR034157	DNA topoisomerase 2, TOPRIM domain	CDD	cd03365	TOPRIM_TopoIIA	coord: 453..571 e-value: 1.28816E-78 score: 252.221
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 256..414
IPR013760	DNA topoisomerase, type IIA-like domain superfamily	SUPERFAMILY	56719	Type II DNA topoisomerase	coord: 430..1179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G29600.1	CSPI03G29600.1	mRNA
CSPI03G29600.3	CSPI03G29600.3	mRNA
CSPI03G29600.2	CSPI03G29600.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0006265	DNA topological change
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
molecular_function	GO:0046872	metal ion binding