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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGGGCAGAAGGGGGGTTTAGCGGCGGAAATTTAGAAGTGTGATGGAGTTGAGGGGGAGGAGGGATTTGTGAAGGCGAGGCGGTGGAGTGGAGATTATTGAGAGGAAGATTTGTTGAAGGATGCGAGATTTGGGATATGGGATTGGCTGTCGGAGCCGGTGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG mRNA sequence ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGGGCAGAAGGGGGGTTTAGCGGCGGAAATTTAGAAGATGCGAGATTTGGGATATGGGATTGGCTGTCGGAGCCGGTGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG Coding sequence (CDS) ATGGAACCCTCGCCGGCGGTGGATGGCCCCGGCGGTGGTAGGGCTATAGCATCGGGGGCAGAAGGGGGGTTTAGCGGCGGAAATTTAGAAGATGCGAGATTTGGGATATGGGATTGGCTGTCGGAGCCGGTGCCGGAGATGGCGGTGATTATAGAAGAAAGTGAAGTACAGTAG Protein sequence MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ*
Homology
BLAST of CSPI03G29010 vs. ExPASy TrEMBL
Match: A0A0A0L9B8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G653420 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 1.9e-23 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query: 1 MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 58
MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ
Sbjct: 1 MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 57
BLAST of CSPI03G29010 vs. NCBI nr
Match: KGN58510.1 (hypothetical protein Csa_001074 [Cucumis sativus]) HSP 1 Score: 117.5 bits (293), Expect = 3.9e-23 Identity = 57/57 (100.00%), Postives = 57/57 (100.00%), Query Frame = 0
Query: 1 MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 58
MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ
Sbjct: 1 MEPSPAVDGPGGGRAIASGAEGGFSGGNLEDARFGIWDWLSEPVPEMAVIIEESEVQ 57
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0L9B8 | 1.9e-23 | 100.00 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G653420 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN58510.1 | 3.9e-23 | 100.00 | hypothetical protein Csa_001074 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..27 |
Relationships
The following mRNA feature(s) are a part of this gene:
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