CSPI03G28920 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G28920
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	AB hydrolase-1 domain-containing protein
Location	Chr3: 26466290 .. 26466925 (+)
RNA-Seq Expression	CSPI03G28920
Synteny	CSPI03G28920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCGATTTCCCAATTCTCATCTCTCACAAAAATCACAATTCTCTCTAAACCTCAGCTTCAATGTCTTCTCCTTCTTTCTCTCAATCCTTCGACATCTTATCTTCTCCCTCTCCATTTCAATACTCAAAACAGGGTTTAACCTCAGTTTCATACTCTGCAACTTGTCACCAAGCAGCATTTGGATTGACACAGACACAAGAATGCAATTCCAGACATCAAAACAAACAAACCCAAAAAAAGCCCTGTGCTATTCTAGTCCATTGCTTCGGTGGGAACTCCAAATCCAAATGGCAATTCTTTTCCCAAGTTAGAGACTTGTCAAGATGCTTCAGTTTGTACTTACCCAGCACCAACAAAACCAACATGTCGGATGTGTTCCTAGCGATTTGTGTAGGCGAAGGAATAAAAAGATTGGGTGTGGAGAAGCATAGCGTAGTGGGGAAAGGGGATCAACTATGGAGGATACGTGGCATACCGGATGGCTGAGATTTACAAGTGATGATCAAATGGTAGAGCAGCTTACGAAGACAGGAAGGGATATAGTGGATCTTGTACTAGAAACACCACAGCATTTGAAGTTGATTCAAACATATTCACAAAGTTGTTAATATATAAGCATGATCCAAGTTTGTTG

mRNA sequence

GTTTCGATTTCCCAATTCTCATCTCTCACAAAAATCACAATTCTCTCTAAACCTCAGCTTCAATGTCTTCTCCTTCTTTCTCTCAATCCTTCGACATCTTATCTTCTCCCTCTCCATTTCAATACTCAAAACAGGGTTTAACCTCAGTTTCATACTCTGCAACTTGTCACCAAGCAGCATTTGGATTGACACAGACACAAGAATGCAATTCCAGACATCAAAACAAACAAACCCAAAAAAAGCCCTGTGCTATTCTAGTCCATTGCTTCGGTGGGAACTCCAAATCCAAATGGCAATTCTTTTCCCAAGTTAGAGACTTGTCAAGATGCTTCAGTTTGTACTTACCCAGCACCAACAAAACCAACATGTCGGATGTGTTCCTAGCGATTTGTGTAGGCGAAGGAATAAAAAGATTGGGTGTGGAGAAGCATAGCGTAGTGGGGAAAGGGGATCAACTATGGAGGATACGTGGCATACCGGATGGCTGAGATTTACAAGTGATGATCAAATGGTAGAGCAGCTTACGAAGACAGGAAGGGATATAGTGGATCTTGTACTAGAAACACCACAGCATTTGAAGTTGATTCAAACATATTCACAAAGTTGTTAATATATAAGCATGATCCAAGTTTGTTG

Coding sequence (CDS)

ATGTCTTCTCCTTCTTTCTCTCAATCCTTCGACATCTTATCTTCTCCCTCTCCATTTCAATACTCAAAACAGGGTTTAACCTCAGTTTCATACTCTGCAACTTGTCACCAAGCAGCATTTGGATTGACACAGACACAAGAATGCAATTCCAGACATCAAAACAAACAAACCCAAAAAAAGCCCTGTGCTATTCTAGTCCATTGCTTCGGTGGGAACTCCAAATCCAAATGGCAATTCTTTTCCCAAGTTAGAGACTTGTCAAGATGCTTCAGTTTGTACTTACCCAGCACCAACAAAACCAACATGTCGGATGTGTTCCTAGCGATTTGTGTAGGCGAAGGAATAAAAAGATTGGGTGTGGAGAAGCATAGCGTAGTGGGGAAAGGGGATCAACTATGGAGGATACGTGGCATACCGGATGGCTGA

Protein sequence

MSSPSFSQSFDILSSPSPFQYSKQGLTSVSYSATCHQAAFGLTQTQECNSRHQNKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPSTNKTNMSDVFLAICVGEGIKRLGVEKHSVVGKGDQLWRIRGIPDG*

Homology

[Close]

BLAST of CSPI03G28920 vs. ExPASy TrEMBL
Match: A0A5D3C5P1 (Putative abhydrolase domain containing OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001100 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 1.3e-28
Identity = 71/99 (71.72%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 39  AFGL-TQTQECNSR-HQN-----KQTQ-KKPCAILVHCFGGNSKSKWQFFSQVRDLSRCF 98
           AFGL  Q++E N   ++N     KQT  K+PCA+L+HCFGGNSKSKWQF SQVRDLSRCF
Sbjct: 32  AFGLIIQSREHNDMVYKNAILDIKQTNPKRPCAVLIHCFGGNSKSKWQFLSQVRDLSRCF 91

Query: 99  SLYLPSTNKTNMSDVFLAICVGEGIKRLGVEKHSVVGKG 130
           +LY+PSTNKT+MSDVF AICVG G+KRLGVEKHS+VGKG
Sbjct: 92  NLYIPSTNKTDMSDVFQAICVG-GLKRLGVEKHSIVGKG 129

[Close]

BLAST of CSPI03G28920 vs. ExPASy TrEMBL
Match: B9S5Q5 (Abhydrolase domain containing, putative OS=Ricinus communis OX=3988 GN=RCOM_0652430 PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 9.7e-13
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 54  NKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPS--------TNKTNMSDV 113
           N++   +P  +L+H +GGN  S+WQF +QVR LS+ F+LY+P         TN+T+ SD+
Sbjct: 71  NRRQFNRPNLVLIHGYGGN--SRWQFLNQVRPLSKSFNLYIPDLLFFGDSYTNRTDRSDI 130

Query: 114 FLAICVGEGIKRLGVEKHSVVG 128
           F A C  EG+K+LGVEK++VVG
Sbjct: 131 FQAKCASEGLKKLGVEKYNVVG 150

[Close]

BLAST of CSPI03G28920 vs. ExPASy TrEMBL
Match: A0A6J5UAX5 (AB hydrolase-1 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18860 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.7e-10
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 54  NKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPS--------TNKTNMSDV 113
           N +   KP  +++H +GGN  SKWQF  QV  LS+ F+LY+P         TN+   ++V
Sbjct: 7   NSRRSNKPALVMLHGYGGN--SKWQFIHQVGSLSQSFNLYIPDLLFFGKSYTNRPERTEV 66

Query: 114 FLAICVGEGIKRLGVEKHSV 126
           F A CV EG+KRLGVE+ +V
Sbjct: 67  FQAKCVAEGLKRLGVERFAV 84

[Close]

BLAST of CSPI03G28920 vs. ExPASy TrEMBL
Match: A0A251PV51 (AB hydrolase-1 domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_3G040000 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.7e-10
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 54  NKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPS--------TNKTNMSDV 113
           N +   KP  +++H +GGN  SKWQF  QV  LS+ F+LY+P         TN+   ++V
Sbjct: 56  NSRRSNKPALVMLHGYGGN--SKWQFIHQVGSLSQSFNLYIPDLLFFGKSYTNRPERTEV 115

Query: 114 FLAICVGEGIKRLGVEKHSV 126
           F A CV EG+KRLGVE+ +V
Sbjct: 116 FQAKCVAEGLKRLGVERFAV 133

[Close]

BLAST of CSPI03G28920 vs. ExPASy TrEMBL
Match: A0A251PUZ5 (AB hydrolase-1 domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_3G040000 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.7e-10
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0


Query: 54  NKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPS--------TNKTNMSDV 113
           N +   KP  +++H +GGN  SKWQF  QV  LS+ F+LY+P         TN+   ++V
Sbjct: 91  NSRRSNKPALVMLHGYGGN--SKWQFIHQVGSLSQSFNLYIPDLLFFGKSYTNRPERTEV 150

Query: 114 FLAICVGEGIKRLGVEKHSV 126
           F A CV EG+KRLGVE+ +V
Sbjct: 151 FQAKCVAEGLKRLGVERFAV 168

[Close]

BLAST of CSPI03G28920 vs. NCBI nr
Match: KAE8637310.1 (hypothetical protein CSA_023552, partial [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 4.6e-49
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0


Query: 48  CNSRHQNKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPSTNKTNMSDVFL 107
           CNSRHQNKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPSTNKTNMSDVFL
Sbjct: 1   CNSRHQNKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPSTNKTNMSDVFL 60

Query: 108 AICVGEGIKRLGVEKHSVVGKGDQLWRIRGIPDG 142
           AICVGEGIKRLGVEKHSVVGKGDQLWRIRGIPDG
Sbjct: 61  AICVGEGIKRLGVEKHSVVGKGDQLWRIRGIPDG 94

[Close]

BLAST of CSPI03G28920 vs. NCBI nr
Match: TYK07221.1 (putative abhydrolase domain containing [Cucumis melo var. makuwa])

HSP 1 Score: 136.0 bits (341), Expect = 2.6e-28
Identity = 71/99 (71.72%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 39  AFGL-TQTQECNSR-HQN-----KQTQ-KKPCAILVHCFGGNSKSKWQFFSQVRDLSRCF 98
           AFGL  Q++E N   ++N     KQT  K+PCA+L+HCFGGNSKSKWQF SQVRDLSRCF
Sbjct: 32  AFGLIIQSREHNDMVYKNAILDIKQTNPKRPCAVLIHCFGGNSKSKWQFLSQVRDLSRCF 91

Query: 99  SLYLPSTNKTNMSDVFLAICVGEGIKRLGVEKHSVVGKG 130
           +LY+PSTNKT+MSDVF AICVG G+KRLGVEKHS+VGKG
Sbjct: 92  NLYIPSTNKTDMSDVFQAICVG-GLKRLGVEKHSIVGKG 129

[Close]

BLAST of CSPI03G28920 vs. NCBI nr
Match: XP_038889078.1 (LOW QUALITY PROTEIN: lipase 1-like [Benincasa hispida])

HSP 1 Score: 119.0 bits (297), Expect = 3.3e-23
Identity = 67/114 (58.77%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 23  KQGLTSVSYSATCHQAAFGLTQTQECNSRHQNKQTQKKPCAILVHCFGGNSKSKWQFFSQ 82
           K   TS S SATCHQAAFGLT+TQ+CNS H N     KPC +L+H FGGN  SKWQ F Q
Sbjct: 22  KSEKTSTSGSATCHQAAFGLTKTQKCNSGHPN-----KPCLVLIHGFGGN--SKWQIFFQ 81

Query: 83  VRDLSRCFSLYLPS--------TNKTNMSDVFLAICVGEGIKRLGV-EKHSVVG 128
           VRDLSR F LY+P         TNKT+MSD+F AICVG   ++ G  E +SVVG
Sbjct: 82  VRDLSRSFHLYIPDLLFFGESHTNKTDMSDLFQAICVGGMNEKTGCGEXYSVVG 128

[Close]

BLAST of CSPI03G28920 vs. NCBI nr
Match: EEF40992.1 (abhydrolase domain containing, putative [Ricinus communis])

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-12
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 54  NKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPS--------TNKTNMSDV 113
           N++   +P  +L+H +GGN  S+WQF +QVR LS+ F+LY+P         TN+T+ SD+
Sbjct: 71  NRRQFNRPNLVLIHGYGGN--SRWQFLNQVRPLSKSFNLYIPDLLFFGDSYTNRTDRSDI 130

Query: 114 FLAICVGEGIKRLGVEKHSVVG 128
           F A C  EG+K+LGVEK++VVG
Sbjct: 131 FQAKCASEGLKKLGVEKYNVVG 150

[Close]

BLAST of CSPI03G28920 vs. NCBI nr
Match: XP_015576092.1 (uncharacterized protein LOC8284649 [Ricinus communis])

HSP 1 Score: 83.2 bits (204), Expect = 2.0e-12
Identity = 39/82 (47.56%), Postives = 57/82 (69.51%), Query Frame = 0


Query: 54  NKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPS--------TNKTNMSDV 113
           N++   +P  +L+H +GGN  S+WQF +QVR LS+ F+LY+P         TN+T+ SD+
Sbjct: 71  NRRQFNRPNLVLIHGYGGN--SRWQFLNQVRPLSKSFNLYIPDLLFFGDSYTNRTDRSDI 130

Query: 114 FLAICVGEGIKRLGVEKHSVVG 128
           F A C  EG+K+LGVEK++VVG
Sbjct: 131 FQAKCASEGLKKLGVEKYNVVG 150

[Close]

BLAST of CSPI03G28920 vs. TAIR 10
Match: AT5G21950.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 56.6 bits (135), Expect = 1.9e-08
Identity = 30/82 (36.59%), Postives = 50/82 (60.98%), Query Frame = 0


Query: 54  NKQTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLP--------STNKTNMSDV 113
           + +  +KP  +L+H FG    + WQ+  QV+ LS  F LY+P        S++  N S++
Sbjct: 48  SSENTQKPSLLLLHGFG--PSAVWQWSHQVKPLSHFFRLYVPDLVFFGGSSSSGENRSEM 107

Query: 114 FLAICVGEGIKRLGVEKHSVVG 128
           F A+C+G+ +++L VE+ SVVG
Sbjct: 108 FQALCMGKLMEKLEVERFSVVG 127

[Close]

BLAST of CSPI03G28920 vs. TAIR 10
Match: AT1G72620.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 26/68 (38.24%), Postives = 40/68 (58.82%), Query Frame = 0


Query: 60  KPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLPS--------TNKTNMSDVFLAICV 119
           +P  +++H +GGN  SKWQF  QV DLS+ F+L++P         +  T+ +  F A  +
Sbjct: 82  RPNLVMLHGYGGN--SKWQFIHQVSDLSKSFNLFIPDLVFFGKSYSRNTDRTIEFQARSI 141

[Close]

BLAST of CSPI03G28920 vs. TAIR 10
Match: AT1G78210.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05
Identity = 26/80 (32.50%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 56  QTQKKPCAILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLP--------STNKTNMSDVFL 115
           +++ KP  +L+H  G  + + WQ++   R LSR F+LY+P        ST +   SD+F 
Sbjct: 47  ESKPKPNLLLIHGLG--ATAIWQWYDVARRLSRYFNLYIPDLVFFGGSSTTRPERSDIFQ 106

Query: 116 AICVGEGIKRLGVEKHSVVG 128
           A  +   ++   V+K S+VG
Sbjct: 107 AQTLMRALEAQSVKKFSLVG 124

[Close]

BLAST of CSPI03G28920 vs. TAIR 10
Match: AT1G17430.1 (alpha/beta-Hydrolases superfamily protein )

HSP 1 Score: 45.4 bits (106), Expect = 4.3e-05
Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 0


Query: 64  ILVHCFGGNSKSKWQFFSQVRDLSRCFSLYLP---------STNKTNMSDVFLAICVGEG 120
           +++H +GGN  SKWQF  QV DLS+ F+L++P         S N+    ++     VG G
Sbjct: 82  VMLHGYGGN--SKWQFVHQVSDLSKSFNLFIPDLVFFGKSYSKNRDRSVEIQARSVVG-G 141

The following BLAST results are available for this feature:

BLAST of CSPI03G28920 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G28920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5P1	1.3e-28	71.72	Putative abhydrolase domain containing OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
B9S5Q5	9.7e-13	47.56	Abhydrolase domain containing, putative OS=Ricinus communis OX=3988 GN=RCOM_0652...	[more]
A0A6J5UAX5	7.7e-10	45.00	AB hydrolase-1 domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_...	[more]
A0A251PV51	7.7e-10	45.00	AB hydrolase-1 domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_3G04...	[more]
A0A251PUZ5	7.7e-10	45.00	AB hydrolase-1 domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_3G04...	[more]

BLAST of CSPI03G28920 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8637310.1	4.6e-49	100.00	hypothetical protein CSA_023552, partial [Cucumis sativus]	[more]
TYK07221.1	2.6e-28	71.72	putative abhydrolase domain containing [Cucumis melo var. makuwa]	[more]
XP_038889078.1	3.3e-23	58.77	LOW QUALITY PROTEIN: lipase 1-like [Benincasa hispida]	[more]
EEF40992.1	2.0e-12	47.56	abhydrolase domain containing, putative [Ricinus communis]	[more]
XP_015576092.1	2.0e-12	47.56	uncharacterized protein LOC8284649 [Ricinus communis]	[more]

BLAST of CSPI03G28920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21950.1	1.9e-08	36.59	alpha/beta-Hydrolases superfamily protein	[more]
AT1G72620.1	1.3e-06	38.24	alpha/beta-Hydrolases superfamily protein	[more]
AT1G78210.1	1.5e-05	32.50	alpha/beta-Hydrolases superfamily protein	[more]
AT1G17430.1	4.3e-05	38.46	alpha/beta-Hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR43139	SI:DKEY-122A22.2	coord: 53..127
None	No IPR available	PANTHER	PTHR43139:SF37	ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN	coord: 53..127

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G28920.1	CSPI03G28920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016787	hydrolase activity