CSPI03G28440 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G28440
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	oligouridylate-binding protein 1B-like
Location	Chr3: 26032257 .. 26042338 (+)
RNA-Seq Expression	CSPI03G28440
Synteny	CSPI03G28440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCACTCAAAAACTTTCTGGGAGCGTCTCTCTTCTTCTCCCATTTTTTCGAGGTCGTTGACACGAGCCTCGTTCCACACCGGTGCCCTAATCTATCGCTCTGTCTGCAAATTATTGTAATTTAAGACCATAAACCCCAACAAAAATGCAGCATCAGAGGTTGAAGCAACAGCAGCAAGCTTTGATGCAGCAAGCTCTTCTTCAGCAGCAGTCTCTCTATCATCCTGGCCTCTTAGCTCCTCCCCAGGTTTCAACTTCTTCCCATCATTTCTTTCTTCCTTTACCTCTGATTTATGTTCTTTCATTTGATTCTTCCCTTTTCCTTGTTGATTTTGAGCTCGATTGCTTCTTCTTAGAACCAAGGCAGGTGGCTTTGTTTTTTTTTTTTTTTTTGTTTTTCCTTCTTCGCTTGATTCGAGCCTTAATGGGTAATTTTAGTTTCAATTATTGATAAATTGAAGGGGATTCTGCGTTTGTAAGATGTGTGGAATTGAGTTTCATTTGTACTTCACATTACCAAGTGCGGTATCAATTCTCATATCAATCACGGGCGGAGCTAAGAATTTCCGTAGAAGAGGGCAAAGCTATTATAGTCTCATATTCTTCTTTCGTTTTTCCCCCTAAATTGTAAATTTCCTAACGATATCTTGATGTTTGATAATAGTCTAAGTTTTAATAAAATCCATTCTTCTGGTTGGTTATACATCTGAATTATAATTAATTCACGATGATATTACAAGCTGTTTTGGCACCTAGGTATCGTAGGTTTAGGCGAATTGTCCCTTAAAATTAGTCGAATGGCCCGAAGTAATAAAGAAATGTTATTAGTGGGTGTCATAGGAGTAATGATTAGACTGCTTCCCTGTGCAGTGTGTTCTAAACAATGTGTATGATTTTTTTTATTTTATATTCCAACCAGTAAATGCACTTCCAATTTTCGAACTAATTATTCAAATAGTTGAAAATTGTAAACTTGGATAAACGAACCACTCAAATAATATGCAGAAGAGACAGAGAAGAATGTATCTATTGACTTAACTACGAAAAATAAAGGTTTTTTGCCCACATGAACTTAGGTTAACTGACATCTGTTTCTTTTCAAGGACAAGAGATTCTAGGTTTGAGTCCCCTTACCGGACCCCAAGTTGTTCTTAAAAAGACCTTTTCAAAAAAAAAAAAGGTTTCAGTTTATCTAATTGATGTAGAGAAGAAAGCTTTGAATGTTTAACCATCTAAACAAAATTAAATAAAAAAAACTGAAACAACTGCCAGCGAACCAACTTGAATGGTAATGAAACCCAGGGCTTTGTGTCCTATTGTTGTTCTCAAGTTTCCAAGAATCCTTTCACGACACTTTCTGGACCAGAAGACGGTTGTACTAAGTCCACATATCCGTACTAGTTTGGATTGCTTGTTATAATGTCTCATAGGCCACAGAGAGTTCTTCTCATTAAAATAATCTTCAGAATACAAGACTCTTTAAAGAGAAAAAGTAACAATCTGCTTAATAATGAAATTACAACTACTAACAAAACATAACTAATGCAGATATTAGTTATTATTACACAACCTTCCAAAATTTGTGATAAATAGATGTTTACAGTTGAAACTTAAAAATGCACATCAGGTTATTTTTCTTGTGTATAAGCATTAGCGTCTTTTAACTGCTCTGGATTAGTCAGGAAAATCTAATGGAACCATTTTGAAATCCTTCAGCTGCAGGTCATTTTCTGCAGTGACATTTTTCTCATTTTTCTTTTACCCTTTCTTTTTGCAGATTGAGCCAATTCCAAGTGGAAATTTACCTCCTGGTTTTGATGCAAGCACTTGCCGCAGTGTGTGAGTGTTTGGCTATACTATTACCATTCATTATTTTTTTCATTATACTTCTCATTATATTTTAATATAATTAAATTTATTTTTTTTGCTTTTAGTTTTATTTCTTGCTAAATCTTATAATGCTGTCTAATAATTCTCTTTGTTTGTATCTCATTGAAAATATTTCTCATATTGCTTTTTTAATATTAGTTTCATTAGTTTCACTTGTGCGATTAAATCCTTTGCTTTCAATTCCATGAATCATTTCAAATTTCAGTGATGATGATAAATATAGTTTGTGCACTTTAACTAAATTTATGAGGTATATTGTTGAATTCTTGAGTATTCTCTCTTGTTGCATCTCTGACTTTACTTTGTCACTTCCATTTGATTTATTGCACGACTGCTTTATAATTCAGATATGTTGGAAACATCCATATACAAGTAACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCCTGTTGAAGGCTGTAAGCTTGTAAGAAAGGAGAAGGTTTGTCTTCTGCAATGCATATTATCCTTCTTTAAACTCGAGTATTGGACTTGTTGGAAATTGCTTGTCATATTCTATGTTTCAAGATCATTATCATACTGACCTACGCTTGTGTTGTCTCTCCTTTTTGTAGTCATCCTATGGATTTGTCCACTACTTTGATCGGAGATCAGCTGCCCTGGCTATTTTGTCACTCAATGGGAGGCATTTGTGAGTAGAACTATGTATATATTTTTATTAAGTCTTCTTATTTTGTAGTATTATCTCGAACATGTTATGTATGTTGCAGGTTTGGGCAGCCTATTAAAGTTAACTGGGCATATGCTAGTAGCCAGAGGGAAGACACATCAGGTTGGACTTTAATTGATTATTGTCTTATTTACTGATCTTATGATGGTTTTTTCATTCAAAACAAAACTTCCACAAACATTTTAAATTTTTTCTTCTTTGTGCAGGTCATTTCAACATTTTTGTTGGCGATCTTAGCCCTGAAGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGCTTACTCCAGTTGCTCGTAAGCATAATCTCTTTAAATATTAAACTTTGTTTCTCATCTTCCTTTTTGAACTATTCATTTAATGGCTTCCTAACTATGAGAAAATAAGATTAATAGTGTGTGTGTGTTTTATTGTTGAGTTATTGAAATTATTATTTTATATATATGTATATATATATATGGAAACTGAAATTTTCATGGGAACTACTATGGAAACTGGAAAGATTAGCAACAAGGTAAGCTTCCTCTTGGAGTATGCAGAAAAACAGTTTCCCCAATAAAACCCAGTCACAGGACGCCTAAACTCAAGAAATTGAAAGACCTCAATCCTGACTTGGGTAGCTGACATGAAACCATAAGTTTCTTTTCTTTCCTCTTAAGAGGTCAATAGCCTTTTGAACATGATGGATTCTATCTGAACAATCCTTTCAATGAAGCTTTAAATGAGATGGACGTGTGAACCAAAGACTTTGTCCAATCCTGTAAAATATAGGATGACAACAATTCCAAAATTTCCTATTGGAAAATCTACTGCAAATGCAAAGTCGAGACTCAAGAGCAACCCCAAAGCGGGAAGTAAACTCCGAAAAAAACAAAAGGATGGAAATTGCCACTTGCTAATTTTCTTTCCACCAATTCTTGAAATAATCTGTCTGATCAAGCCCATAAATGAAACTTCTATCTCTTCCAAAATAATGCCTCACTTTTCCTGGAAAACGTTTTTTTCTTGTACCAACGAAAATGTCATCCTTTCTAAGATTCATTGATAAGCTAAAAAAATGAGTTTTCAATCTAGTCTCATGGACAATTGCATCTTTACTGCTGTTTTGCTAATTTCAGAGATGCGAGGGTTATGTGGGATCAGAAGACTGGGCGATCAAGAGGGTTTGGATTTGTTTCCTTCCGAAACCAGCAGGTTTGAATTTCTTCTCAGTGCTTCTGCTAACTGTCTGTTCTTTAATTTTGTTCTGTGGAATGAACATTTTGATGCATTTCTTTCAGGAAGCTCAAAATGCAATAAATGATTTAACCGGTAAGTTCTGGTTCTTATCTTTTTTCCTTAATGGATCTCTGCCAACCCTTGTAATGTTTCTTGGCATTTAGTTACTGTGTTGGACTTATGCTTGGAACTTATTAATCTGACCACTTATTGGTCTTGTATATGTTTTCCACTTAGGTAAGTGGCTTGGGAGTAGACAGATTCGTTGTAACTGGGCAGCCAAAGGTGCTGGAGTGAATGAAGATAAACAGGGCTCAGATACCAAAAGTGTGGTAGAACTATCAAATGGCTCATCTGGTGAGTTTTGTACAGAACCTGGACCCGCCTGCAGAGATTCCTACTTTTACTATTTATTTGAGCACCCTAAAATTAAATTGTGATTCATTTATTTGACTTACAAGCAGAAGAAAATTGTTTCTGTGCAAGTGTGAAATTTGGTTCTCTGTGACCTTGTTATTAGAATAAGATCTGAAAAGCTTATATTCATCTCTGTGGTTGTGCAGAAGATGGTAAAGAGTCCGTAAATAATGATGCTCCTGAGAACAACCTTCAATATACTACTGTATATGTTGGCAATCTTGCTCCAGAGGTAAAACTACCTTAATTATTGCATGATCTAACCATTTAGCTCTTTAAGATGCAATTGGAATGTCCACTAGCACGGAGAGCTCTTTATAAGGCTCCGTATATAGGGGAAAAGATGTTTGAGGGTGATATTTTATTTCGACGGAGAATGTTTGATTAAATGTTCCCAAACATCATAGTTCTCATAACTATTTCATTTGGAACCAATAAATTTTCTTGTCTGCAGGTTAGTCAACTTGATCTACATCGCCATTTTCATTCTCTTGGTGCTGGGGTCATTGAAGAAGTCCGAATTCAGCGGGATAAAGGATTTGGTTTTGTGAGGTACAATACTCATGCTGAGGCAGCTCTGGCTATTCAGATGGGAAATACTCGGTCTTTTCTTTGTGGGAGACAAATAAAGGTATGGTTCTGCTTTATATGGTGAAGCTACTCTCTCGTATTGCTAATTGTGTCCAGGAAAAAATTTATAAAATTTGGACCATATGTCACTTTCCATTGCGCCAGTGCTGAAGTTTTTGAATGGTAATCCTCATGTTACAATTCATTGAGCAGACGTAGCTGACATCGCATACTGGTGACTTGACATACCATATTCTCTAGATTTGGGTCTGAACTGATGTAATTGGTCACCTGAAAATAAAATTAAAGGTGTACAAGTCTTGGTAGTATTGAACAGTTGGCTCCGTTCTTGGTGCATAATCATTGCTTCTCTGTTTAAAATTTTTCAAATACATAAATTGGATAGTTGTCCACTGAGGGAGAAAGGTTAATAAGTTTACTCATCAGGCTCTCTTTTATTTTCATTTACAACCATCAAATTTCCAAGTTATTAATGCATCTACAGTCTTCTATGATCCCCTGGAAATTTCCATCAGAAATTATCATGTGCATAATCGTACTAATGATGACCATCCTTCCCCCATGGCCCCATCGGTTCACTTGATGAACCCCCCTGCTCCTTCATTCCTTTGATCTTCTGTGCGATCTTCCTCTTCCCCCAAGATTCCTTCTTGAAATTGTTTTGATCGTTTTATAGACATTGTTTCTACTGCTTTCTTTTGGTGCAAAACCAAGTAATATTTTGTTCACAATAACTTATCTTATTTGATTTCATTTGGAGAGCTTCATTAATTCATCCATAGGTGCATGGGAGTTTTTTACTCCCTTAATTTATCAATCTGAGTTTTTTTTATTTTTTTATAAAAAATCTTAAAACTCAATTGAAGGGACAGTTGCGGTGAAGAAATATTTGGGAGGGAAAGTGGAACCAAGAATCTAAAGGAGGGAGATGTAGATTCCAAATATTTTCAGTTTGTTACCTCATAGAGACCAAAAACATTTTCTTTGAGAGAGTTGAGGAGGTATTATGTTGAGTAAGTGTGAGAGATGCCGAGGAAGACTTGATCAATTGATTTACTAAACTATCGTCTTAAACCCTAGGCAAAAGATATATCCATCCCCTAGATTGGAACCCAGTAAATATCATTTAGAGGCTATGAAGCATAGGTACTTCGTGTGAGGTAGGGAATCAATCAGTATTGGTTCCAGATACATATGTATTTGATGGCGTGTCTGTTTTTACTTTTTTTTCTTAATAACGTCTCACCTTCCCAATTCTTGAAGGGTACATGCTAGACATTCCCCCACCCCACCTTCCTCACCACCAAAGAAAAAAAAAAAAGAAAATCTTTGACAACTCAACAAATTTTTTTTGTTTATCTTCGTACCTCTTCCTCTAGTCATCTTCTCTAATCGATCTAACTCTGGTGCCAACTGCCACCAACCTTGTCTATTGTTGTATTTTATTGACTTGTAATTCAATTGTCTCTAATGTTGCCTTTTGTATTGTATATTAATGTTAGAAGTTGTACTATTGTCATTAACATGAAATTACATGCTTTTTAGCAGATTGCATTTGTATCCTTATGTTAAATTTATTTATATCCTAGACTTGTTTGTTTGTTTTTCTAAATAAAAAAACATATCCTCAATGTAACTGACATCCCAGTTCTTCAGAAACTCATCTTCTTCGAATCTTATCGCATCCATATTCGTGTCTGTGATTCATTGATAAGAGGTTTTTTCTTGAGCTCCTTTTCATTGTAGATGAAATTCTGGCGGCTAAGGTCCCTAGGTGATATGGTTTTTCAATGTTTTTCTTTGTTACTTGTTGGAATACTCTCAAATCAGATTACAATGAAGGTGTTCTAGGACCTTTTTTCTTTATAGAATGGCCTTATTTATTCTTAGTGTCAGCAAAGCAAAACCTATATTATGCCTTGTTCCCAAATGAGTTGGAAACCACTAGACTGACTAATCTTACCTCATGACATCACGAGCATCAGTTCACCTGATGATTGATAGCTGAAAATCCAAGAGTCCAGTGTTGCAGCCTTGTATTAGTTAAAAGTTTAGTACTAAACCCTGACATGTAGAAATATGGTTTGAAAGAAATCAACACGTTTTCCACCATACGGCTTCAGTATGGTCCAACCGATTCGTTTAAATGCATCATCATGGTACTCCATGGTCAAAGGATTTCAGGGTTATTCCACACAGGACATTCACCTCAACTGGCAAGCTTTTATTGTTTAGCCATTTTGAGTCCAGCTAAGGAGATTTAGGGAAAGGCCCTGATTCTGCTCGGTTTTGAGTTGTCTTTTAGTCTTTTTTTTAATGATAGGCTGCTGATGTAAAGGTCTTATGTTTTTTACCATTTTTAATTTCTCAATGTCATTTCATTTCTCTATTTTTCGGATATGATGAGGACGCTAAAGGGGTGTCAACCTAGTTGAGATGTCCAGGTGCGTTTTCTGATCCCTAGTTCTTTAATTGCCCATTGTATAACCCTCTTGTATTTTGAACTCTGCCTCATTTTTTATAATAAATGAGATTAGTTTATTTATTTAAAAAAACCCTGACATGTAGAAGTCTTCAGAGGAAAACAAGTGTTTTTTTCTTCTTTTCTGGATTTTAATCCAATCTCTGAAAGGTGTTTTCCTTTTTGGTCATAGAGTAAAATCTTCGTCTTGGGTTGCCTTCAAATGCCAACTATTCCATTCCATATCTATGGCCATCAAGGGGAAAAATTCAGACCACAACCGGTGGTATACAAAGTTGACCTCTCTTCCCCTTCATTTTTAGTTTCATGATTTTTCTTTTTCTTTTTATTATATTTTTAGCCAGCAACACTCTCCATAAACCAACCTCAATATGCTGATAGCACCACTAATTTCTCCTACGGACTTAATTGGGTTGAAACTTGGTATGCAAACCTACTAAGTGAATTTTCAAAATCAGAGAAATCTTGAATTTAAAAAAGGGCAATCTCCTTCCGTCAAAACATGACTAATCTTCTCAAGGCTGTCAAATACTTTGAAGTCTCCTTTGACTTTGACTTAGACTTGCCTTTCTAGATTGGAGGTCTTGGGTCTCGTTCTGCCAATGTCCTCAAAACAGTGCCAACATCATCCAATGTTCTTCAGTGACTTAGCCCTCAAACTATCTCGGTCTCAACTTAAATGGACCTTAAAGCATTTCTTTTGGAAACCAATCATTGAAGGTTGGTGGTAGGTACACCCTTATTCTCCCTTCTAAAATCTCCAATTTTACTCCATATTCCTCTCCAAGGTTCCAGGAAATTTCCAAATCTTTAACTTATACCAACATACCGCTCATCTTTTGAACAGGTAGCTTTCTGTGTTGAACATAAACCTCAGAAGACAACTTTAAAGTCGAGGTGTTCCAAGATTGGCTATCAGTATTTTTCATGGATGATTGTTGTCTAGGTGACAGGGTCTGTTCTCTCTGTTCCAGATTCTTCATTCTTGGGACTGGCCTTTTGACCTTTCAGGTTTTCTTGGATTGCAAACCTCCTAGAATGCATTTTCATTCCAAATTTATATAAAGTTATTTGAAAGAACTATAAATGTACAAAGATCCAACACATGATCCAAAGAAGTATGCATCTGATCATCTCCATTACTAGATGTGTTCACTCCAGAATCCGAAGATTAGTTATATGTTATATCCATTGCTTGGTGTCTTCTCCTTGTGGCATTTGCTCTTTACTCTTAATCACTTTTGATGGATCCCTGGCCCTTGTCAGGAATGTAAAATTCAACCTTGTAGCCCTCATGCTCTCTGACCCTTCCAAGATTCTATCAACTTCTTTTGGATTATGTGGCCGGAGACAAACCAATGAATTTTTGTAGGCAAAGAAAGTGATAAATCATCGATTGACCCAAAACCTTAAGCTGACGGGTGAAGGTAAATTTAATATATATCATCTAGCTGAAAGAAATTTCATATATCTTCTAAATCTTAACGGCTGCTGACTGGCGTCAAAGATATACAAAAAAGCCCCATGACTTCATGCTAATCCAATGTATCTCATCCACACCCTCATGGTCTTCGAAATGTTTCGTTCTTAATTTATGATATTTTCCCTAATTAGAGGAGTTTTTATAACTCCCTTAGTTGGGCTGGAGCTATCCTTCTCTCTTTTGTCTATTTCACAGGCATGAAACTCTTTCTTTTCAGGCTTACTAGTTACTACTGGGATGCCCTTGTTATCTACTCCAACTGTTCATTATAAAAGCGTGTATCACATTCATTTTTAATGATATGGAAAAACATTTTTGCAGTTTATGTTGTCATAGTAATTTCAGCCGGAATTTTGGTTTGAAAGGATGCTTGGCAATCTTTCAAAGTCTTTTTTGTATTTTTCTTTTCAAGCTTTAGTTTGTATTGGGAACTTTTATCTTTCATAGTTGCTCTCTGATTACCGCTCTATTGTTTTCGTTAGTCTCTTTTCATTATATCAATAAAAAGTTCTATTTCCTTGAAGAAAAAAAAGGTCTAGGAGGAAATTGCTAGTTCTTTTGGGAAATAACCCAATTGATTTTTGTCCTTATTGCAGTGCTCTTGGGGTAGCAAACCCACACCACCAGGAACAACATCAAATCCACTCCCACTGCCAGCAGTTGCTTCCACACCTGGCCTTTCAGCAGCTGACCTTTTGGCTTATGAGCGGCAACTAGCAATAACCAAAATGGGTGGTGTTCATGCAGCACTTATGCACCCTCAGGGGCCTCACCCTATGAAACAGGCACCTATGGGAATGGGTGCAGCGGCAGCCAGCCAGGCTTTATATGATGGTGGCTTCCAGAACATTGCAGCACAGCAACTTATGTACTACCAGTAGTAAATATGGCTTAGCTTTTGCTTTTGCTTTTGCTTGATGAAATCGATTTATATCCTCTTTACTTTTTCTGAGATTATATGAGCCTTCAATGCACCCTCTATATGAGTTTTTTTTCTTCTTTTGGTGTTCAGATTCTTTTGCACCTACAAATGGAAATTATGTTTGTTACACTTGCTTTTTCCTTTTTTCTTTTTTAGTGTTATTATTAGGGCCAGGGTCAGTGGCTATGGGCAATTGAGGAAGCTTGTTGATCAATCAGAATGTACTTTGTTACTTTGTTTTCTTTCTGAAGGACAATCTTGTTGTTACATACAATATAATATAAAACATATTCAACTGATTTAACCCACCACAGCCTAAGTGTGAACAAAAAGTGCTAGAAGAGAAAATTGAGTGTTGAACTGCGAAGCTTGGGCTCCTGTTA

mRNA sequence

GCCACTCAAAAACTTTCTGGGAGCGTCTCTCTTCTTCTCCCATTTTTTCGAGGTCGTTGACACGAGCCTCGTTCCACACCGGTGCCCTAATCTATCGCTCTGTCTGCAAATTATTGTAATTTAAGACCATAAACCCCAACAAAAATGCAGCATCAGAGGTTGAAGCAACAGCAGCAAGCTTTGATGCAGCAAGCTCTTCTTCAGCAGCAGTCTCTCTATCATCCTGGCCTCTTAGCTCCTCCCCAGATTGAGCCAATTCCAAGTGGAAATTTACCTCCTGGTTTTGATGCAAGCACTTGCCGCAGTGTATATGTTGGAAACATCCATATACAAGTAACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCCTGTTGAAGGCTGTAAGCTTGTAAGAAAGGAGAAGTCATCCTATGGATTTGTCCACTACTTTGATCGGAGATCAGCTGCCCTGGCTATTTTGTCACTCAATGGGAGGCATTTGTTTGGGCAGCCTATTAAAGTTAACTGGGCATATGCTAGTAGCCAGAGGGAAGACACATCAGGTCATTTCAACATTTTTGTTGGCGATCTTAGCCCTGAAGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGCTTACTCCAGTTGCTCAGATGCGAGGGTTATGTGGGATCAGAAGACTGGGCGATCAAGAGGGTTTGGATTTGTTTCCTTCCGAAACCAGCAGGAAGCTCAAAATGCAATAAATGATTTAACCGGTAAGTGGCTTGGGAGTAGACAGATTCGTTGTAACTGGGCAGCCAAAGGTGCTGGAGTGAATGAAGATAAACAGGGCTCAGATACCAAAAGTGTGGTAGAACTATCAAATGGCTCATCTGAAGATGGTAAAGAGTCCGTAAATAATGATGCTCCTGAGAACAACCTTCAATATACTACTGTATATGTTGGCAATCTTGCTCCAGAGGTTAGTCAACTTGATCTACATCGCCATTTTCATTCTCTTGGTGCTGGGGTCATTGAAGAAGTCCGAATTCAGCGGGATAAAGGATTTGGTTTTGTGAGGTACAATACTCATGCTGAGGCAGCTCTGGCTATTCAGATGGGAAATACTCGGTCTTTTCTTTGTGGGAGACAAATAAAGTGCTCTTGGGGTAGCAAACCCACACCACCAGGAACAACATCAAATCCACTCCCACTGCCAGCAGTTGCTTCCACACCTGGCCTTTCAGCAGCTGACCTTTTGGCTTATGAGCGGCAACTAGCAATAACCAAAATGGGTGGTGTTCATGCAGCACTTATGCACCCTCAGGGGCCTCACCCTATGAAACAGGCACCTATGGGAATGGGTGCAGCGGCAGCCAGCCAGGCTTTATATGATGGTGGCTTCCAGAACATTGCAGCACAGCAACTTATGTACTACCAGTAGTAAATATGGCTTAGCTTTTGCTTTTGCTTTTGCTTGATGAAATCGATTTATATCCTCTTTACTTTTTCTGAGATTATATGAGCCTTCAATGCACCCTCTATATGAGTTTTTTTTCTTCTTTTGGTGTTCAGATTCTTTTGCACCTACAAATGGAAATTATGTTTGTTACACTTGCTTTTTCCTTTTTTCTTTTTTAGTGTTATTATTAGGGCCAGGGTCAGTGGCTATGGGCAATTGAGGAAGCTTGTTGATCAATCAGAATGTACTTTGTTACTTTGTTTTCTTTCTGAAGGACAATCTTGTTGTTACATACAATATAATATAAAACATATTCAACTGATTTAACCCACCACAGCCTAAGTGTGAACAAAAAGTGCTAGAAGAGAAAATTGAGTGTTGAACTGCGAAGCTTGGGCTCCTGTTA

Coding sequence (CDS)

ATGCAGCATCAGAGGTTGAAGCAACAGCAGCAAGCTTTGATGCAGCAAGCTCTTCTTCAGCAGCAGTCTCTCTATCATCCTGGCCTCTTAGCTCCTCCCCAGATTGAGCCAATTCCAAGTGGAAATTTACCTCCTGGTTTTGATGCAAGCACTTGCCGCAGTGTATATGTTGGAAACATCCATATACAAGTAACAGAACCACTTCTTCAAGAGGTTTTTGGTAGTATTGGTCCTGTTGAAGGCTGTAAGCTTGTAAGAAAGGAGAAGTCATCCTATGGATTTGTCCACTACTTTGATCGGAGATCAGCTGCCCTGGCTATTTTGTCACTCAATGGGAGGCATTTGTTTGGGCAGCCTATTAAAGTTAACTGGGCATATGCTAGTAGCCAGAGGGAAGACACATCAGGTCATTTCAACATTTTTGTTGGCGATCTTAGCCCTGAAGTCACTGATGCTATGTTGTTTGCATGCTTTTCTGCTTACTCCAGTTGCTCAGATGCGAGGGTTATGTGGGATCAGAAGACTGGGCGATCAAGAGGGTTTGGATTTGTTTCCTTCCGAAACCAGCAGGAAGCTCAAAATGCAATAAATGATTTAACCGGTAAGTGGCTTGGGAGTAGACAGATTCGTTGTAACTGGGCAGCCAAAGGTGCTGGAGTGAATGAAGATAAACAGGGCTCAGATACCAAAAGTGTGGTAGAACTATCAAATGGCTCATCTGAAGATGGTAAAGAGTCCGTAAATAATGATGCTCCTGAGAACAACCTTCAATATACTACTGTATATGTTGGCAATCTTGCTCCAGAGGTTAGTCAACTTGATCTACATCGCCATTTTCATTCTCTTGGTGCTGGGGTCATTGAAGAAGTCCGAATTCAGCGGGATAAAGGATTTGGTTTTGTGAGGTACAATACTCATGCTGAGGCAGCTCTGGCTATTCAGATGGGAAATACTCGGTCTTTTCTTTGTGGGAGACAAATAAAGTGCTCTTGGGGTAGCAAACCCACACCACCAGGAACAACATCAAATCCACTCCCACTGCCAGCAGTTGCTTCCACACCTGGCCTTTCAGCAGCTGACCTTTTGGCTTATGAGCGGCAACTAGCAATAACCAAAATGGGTGGTGTTCATGCAGCACTTATGCACCCTCAGGGGCCTCACCCTATGAAACAGGCACCTATGGGAATGGGTGCAGCGGCAGCCAGCCAGGCTTTATATGATGGTGGCTTCCAGAACATTGCAGCACAGCAACTTATGTACTACCAGTAG

Protein sequence

MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ*

Homology

[Close]

BLAST of CSPI03G28440 vs. ExPASy Swiss-Prot
Match: Q9LQI9 (Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 2.2e-198
Identity = 344/422 (81.52%), Postives = 373/422 (88.39%), Query Frame = 0


Query: 4   QRLK---QQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 63
           QRLK   QQQQ +MQQAL+QQQSLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNI
Sbjct: 2   QRLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI 61

Query: 64  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 123
           HIQVTEPLLQEVF   GPVE CKL+RKEKSSYGFVHYFDRRSA LAILSLNGRHLFGQPI
Sbjct: 62  HIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI 121

Query: 124 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 183
           KVNWAYAS QREDTS HFNIFVGDLSPEVTDAMLF CFS Y +CSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRG 181

Query: 184 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 243
           FGFVSFRNQQ+AQ AI+++TGKWLGSRQIRCNWA KGA   EDKQ SD+KSVVEL++G S
Sbjct: 182 FGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVS 241

Query: 244 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 303
           EDGK++ N +APENN QYTTVYVGNLAPEVSQ+DLHRHFHSLGAGVIEEVR+QRDKGFGF
Sbjct: 242 EDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGF 301

Query: 304 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 363
           VRY+TH EAALAIQMGNT S+L GRQ+KCSWGSKPTP GT SNPLP PA A  PG SA+D
Sbjct: 302 VRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASD 361

Query: 364 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 423
           LLAYERQLA++KM G++  + HPQG H  KQA   MGA  ++QA+YDGG+QN  AQQLMY
Sbjct: 362 LLAYERQLAMSKMAGMNPMMHHPQGQHAFKQA--AMGATGSNQAIYDGGYQN--AQQLMY 419

[Close]

BLAST of CSPI03G28440 vs. ExPASy Swiss-Prot
Match: Q9LJH8 (Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 SV=1)

HSP 1 Score: 669.1 bits (1725), Expect = 3.3e-191
Identity = 332/422 (78.67%), Postives = 370/422 (87.68%), Query Frame = 0


Query: 2   QHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 61
           QHQ+ +QQQ  + QQAL+QQ SLYHPG+LAPPQ+EP+PSGNLPPGFD STCRSVYVGNIH
Sbjct: 8   QHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIH 67

Query: 62  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 121
            QVTEPLLQE+F S GPVE  KL+RK+KSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK
Sbjct: 68  TQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 127

Query: 122 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGF 181
           VNWAYA+ QREDTS HFNIFVGDLSPEVTDA L+  FS +SSCSDARVMWDQKTGRSRGF
Sbjct: 128 VNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGF 187

Query: 182 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSE 241
           GFVSFRNQQ+AQ AIN++ GKWL SRQIRCNWA KGA   +DK  SD KSVVEL+ GSSE
Sbjct: 188 GFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSE 247

Query: 242 DGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFV 301
           DGKE++N + PENN Q+TTVYVGNLAPEV+QLDLHR+FH+LGAGVIEEVR+QRDKGFGFV
Sbjct: 248 DGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFV 307

Query: 302 RYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAADL 361
           RYNTH EAALAIQMGNT+ +L  RQIKCSWG+KPTPPGT SNPLP PA A  PGLSAADL
Sbjct: 308 RYNTHPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADL 367

Query: 362 LAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNI-AAQQLMY 421
           L YERQLA++KM  V+ ALMH QG HP++QA  G+ AA A+ A+YDGGFQN+ AAQQLMY
Sbjct: 368 LNYERQLALSKMASVN-ALMHQQGQHPLRQA-HGINAAGATAAMYDGGFQNVAAAQQLMY 427

Query: 422 YQ 423
           YQ
Sbjct: 428 YQ 427

[Close]

BLAST of CSPI03G28440 vs. ExPASy Swiss-Prot
Match: Q9SYG4 (Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 SV=1)

HSP 1 Score: 633.3 bits (1632), Expect = 2.0e-180
Identity = 311/424 (73.35%), Postives = 359/424 (84.67%), Query Frame = 0


Query: 2   QHQRLKQQQQALMQQALLQQQ-SLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 61
           Q Q+ +Q QQA++QQA++QQ  SLYHPG++APPQ+EP+PSGNLPPGFD +TCRSVY GNI
Sbjct: 11  QQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNI 70

Query: 62  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 121
           H QVTE LLQE+F S GP+E CKL+RK+KSSYGFVHYFDRR A++AI++LNGRH+FGQP+
Sbjct: 71  HTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPM 130

Query: 122 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 181
           KVNWAYA+ QREDTS HFNIFVGDLSPEVTDA LF  FSA++SCSDARVMWDQKTGRSRG
Sbjct: 131 KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRG 190

Query: 182 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 241
           FGFVSFRNQQ+AQ AIN++ GKW+ SRQIRCNWA KGA   EDK  SD KSVVEL+NGSS
Sbjct: 191 FGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSS 250

Query: 242 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 301
           EDG+E  N DAPENN Q+TTVYVGNL+PEV+QLDLHR F++LGAGVIEEVR+QRDKGFGF
Sbjct: 251 EDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGF 310

Query: 302 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 361
           VRYNTH EAALAIQMGN + FL  RQI+CSWG+KPTP GT SNPLP PA AS P LSA D
Sbjct: 311 VRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMD 370

Query: 362 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAA--QQL 421
           LLAYERQLA+ K        MHPQ  H ++QA +G+  A  + A+YDGG+QN+AA  QQL
Sbjct: 371 LLAYERQLALAK--------MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQL 426

Query: 422 MYYQ 423
           MYYQ
Sbjct: 431 MYYQ 426

[Close]

BLAST of CSPI03G28440 vs. ExPASy Swiss-Prot
Match: Q9M427 (Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE=2 SV=1)

HSP 1 Score: 620.5 bits (1599), Expect = 1.4e-176
Identity = 318/422 (75.36%), Postives = 353/422 (83.65%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQ QRLKQQQ    QQAL+ QQSLYHPGLLAPPQIEPI SGNLPPGFD+STCRSVYVGNI
Sbjct: 2   MQQQRLKQQQ----QQALM-QQSLYHPGLLAPPQIEPILSGNLPPGFDSSTCRSVYVGNI 61

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           H QVTEPLLQEVF S GP+EGCKL+RK+KSSYGFV YFDRRSAALAI++LNGRHLFGQPI
Sbjct: 62  HPQVTEPLLQEVFASTGPLEGCKLIRKDKSSYGFVDYFDRRSAALAIVTLNGRHLFGQPI 121

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180
           KVNWAYAS+QREDTS H+NIFVGDLSPEVTDA LFACFS Y+SCSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASAQREDTSNHYNIFVGDLSPEVTDATLFACFSVYTSCSDARVMWDQKTGRSRG 181

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240
           FGFVSFRNQQEAQ+AINDL GKWLGSRQIRCNWAAKGAG    +Q SD KSVVEL++G+S
Sbjct: 182 FGFVSFRNQQEAQSAINDLNGKWLGSRQIRCNWAAKGAGA-VGEQNSDAKSVVELTSGTS 241

Query: 241 EDGKES-VNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFG 300
           +DG+E  VN DAPENN QYTTVYVGNLAPEV+ +DLHRHFH+LGAGVIE+VRIQRDKGFG
Sbjct: 242 DDGQEKVVNEDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHALGAGVIEDVRIQRDKGFG 301

Query: 301 FVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAA 360
           FVRY++HAEAA AIQ+GN R  L G+ +KCSWGSKPTPPG++SNPLP PA+   PGLSA 
Sbjct: 302 FVRYSSHAEAARAIQLGNAR-LLFGKPVKCSWGSKPTPPGSSSNPLPPPAIGQIPGLSAM 361

Query: 361 DLLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLM 420
           DL AY+RQLA+ KM G  A +            P G    A  Q +YDGG+  IA+ Q  
Sbjct: 362 DLAAYQRQLALAKMAGAQAFMQ-----------PQGQRIGAPGQGIYDGGYGGIASTQPP 405

Query: 421 YY 422
            Y
Sbjct: 422 MY 405

[Close]

BLAST of CSPI03G28440 vs. ExPASy Swiss-Prot
Match: Q6YZW2 (RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 5.1e-139
Identity = 271/441 (61.45%), Postives = 322/441 (73.02%), Query Frame = 0


Query: 2   QHQRLK--QQQQALMQQALLQQQSLYHPGLLAP------PQIEPIPSGNLPPGFDASTCR 61
           Q QRL+  QQQQAL+ Q  LQQQ  Y  G+LA        Q+EPI +GNLPPGFD STCR
Sbjct: 14  QQQRLRQQQQQQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISNGNLPPGFDPSTCR 73

Query: 62  SVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGR 121
           SVYVGN+H  VTE LL EVF S G VE CKL+RKEKSS+GFV Y+DRRSAALAI++L+GR
Sbjct: 74  SVYVGNVHPNVTESLLIEVFQSSGLVERCKLIRKEKSSFGFVDYYDRRSAALAIMTLHGR 133

Query: 122 HLFGQPIKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQ 181
           H+ GQ IKVNWAYAS+QREDTSGHF+IFVGDLS EV DA L+ACFSAY SCSDARVMWD 
Sbjct: 134 HICGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAYPSCSDARVMWDN 193

Query: 182 KTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVV 241
           KTGRSRG+GFVSFRNQQEA+ AI ++TGKWLGSRQIRCNWA K     E+KQ +D  + V
Sbjct: 194 KTGRSRGYGFVSFRNQQEAETAITEMTGKWLGSRQIRCNWATKNNA--EEKQETDNHNAV 253

Query: 242 ELSNGSS-----EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIE 301
            L+NGSS     E  +++ + + PENN   TTVYVGNL  EV++ +LHRHF++LG G IE
Sbjct: 254 VLTNGSSSNPGMEASQDTGSKENPENNPDCTTVYVGNLGHEVNRDELHRHFYNLGVGAIE 313

Query: 302 EVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLP 361
           EVR+Q+DKGFGFVRY+ H EAALAIQM N    + G+ IKCSWG+KPTPPGT+S PLP P
Sbjct: 314 EVRVQQDKGFGFVRYSNHGEAALAIQMAN-GLVVRGKPIKCSWGNKPTPPGTSSKPLPPP 373

Query: 362 AVASTP--------GLSAADLLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAA 421
             +  P        G SAAD++AY+RQL ++++     A     G H +         AA
Sbjct: 374 LPSYQPVPMAGVPQGFSAADIVAYQRQLTLSQVAAGQIA-----GQHGLAGQVSAGLLAA 433

[Close]

BLAST of CSPI03G28440 vs. ExPASy TrEMBL
Match: A0A0A0LCP1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645950 PE=4 SV=1)

HSP 1 Score: 846.3 bits (2185), Expect = 5.6e-242
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 360
           VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 360

Query: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420
           LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY
Sbjct: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420

Query: 421 YQ 423
           YQ
Sbjct: 421 YQ 422

[Close]

BLAST of CSPI03G28440 vs. ExPASy TrEMBL
Match: A0A1S3CDG5 (oligouridylate-binding protein 1B-like OS=Cucumis melo OX=3656 GN=LOC103499180 PE=4 SV=1)

HSP 1 Score: 844.7 bits (2181), Expect = 1.6e-241
Identity = 421/422 (99.76%), Postives = 421/422 (99.76%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 360
           VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSA D
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSATD 360

Query: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420
           LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY
Sbjct: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420

Query: 421 YQ 423
           YQ
Sbjct: 421 YQ 422

[Close]

BLAST of CSPI03G28440 vs. ExPASy TrEMBL
Match: A0A5A7UIJ8 (Oligouridylate-binding protein 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00280 PE=4 SV=1)

HSP 1 Score: 827.4 bits (2136), Expect = 2.7e-236
Identity = 421/456 (92.32%), Postives = 421/456 (92.32%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQ-------------------------- 60
           MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQ                          
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQVSTSSHPLIYILSFDSFLFLVDFELD 60

Query: 61  --------IEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVR 120
                   IEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVR
Sbjct: 61  CFLMERREIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVR 120

Query: 121 KEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLS 180
           KEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLS
Sbjct: 121 KEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLS 180

Query: 181 PEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGS 240
           PEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGS
Sbjct: 181 PEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGS 240

Query: 241 RQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNL 300
           RQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNL
Sbjct: 241 RQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNL 300

Query: 301 APEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQ 360
           APEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQ
Sbjct: 301 APEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQ 360

Query: 361 IKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQGP 420
           IKCSWGSKPTPPGTTSNPLPLPAVASTPGLSA DLLAYERQLAITKMGGVHAALMHPQGP
Sbjct: 361 IKCSWGSKPTPPGTTSNPLPLPAVASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGP 420

Query: 421 HPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 423
           HPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 421 HPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 456

[Close]

BLAST of CSPI03G28440 vs. ExPASy TrEMBL
Match: A0A6J1D4M7 (oligouridylate-binding protein 1B-like OS=Momordica charantia OX=3673 GN=LOC111016923 PE=4 SV=1)

HSP 1 Score: 806.2 bits (2081), Expect = 6.5e-230
Identity = 403/423 (95.27%), Postives = 412/423 (97.40%), Query Frame = 0


Query: 1   MQHQRLK-QQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGN 60
           MQHQRLK QQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGN
Sbjct: 1   MQHQRLKQQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGN 60

Query: 61  IHIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQP 120
           IH QVTEPLLQEVFGSIG VEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQP
Sbjct: 61  IHAQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQP 120

Query: 121 IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSR 180
           IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFS YSSCSDARVMWDQKTGRSR
Sbjct: 121 IKVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSVYSSCSDARVMWDQKTGRSR 180

Query: 181 GFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGS 240
           GFGFVSFRNQQEAQ+AINDLTGKWLGSRQIRCNWA KGAGVNEDKQGSDTKSVVEL+N S
Sbjct: 181 GFGFVSFRNQQEAQSAINDLTGKWLGSRQIRCNWATKGAGVNEDKQGSDTKSVVELTNCS 240

Query: 241 SEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFG 300
           SEDGKESVNN+APENN Q+TTVYVGNLAPEV+QLDLH HFHSLGAGVIEEVRIQRDKGFG
Sbjct: 241 SEDGKESVNNEAPENNPQFTTVYVGNLAPEVTQLDLHHHFHSLGAGVIEEVRIQRDKGFG 300

Query: 301 FVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAA 360
           FVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWG+KPTPPGT SNPLPLPA+ASTPGLSA 
Sbjct: 301 FVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGNKPTPPGTASNPLPLPAIASTPGLSAT 360

Query: 361 DLLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLM 420
           DLLAYERQLAITKMGGVHAALMHPQG HP+KQAPMG+GAAAASQALYDGGFQNIAAQQLM
Sbjct: 361 DLLAYERQLAITKMGGVHAALMHPQGHHPLKQAPMGIGAAAASQALYDGGFQNIAAQQLM 420

Query: 421 YYQ 423
           YYQ
Sbjct: 421 YYQ 423

[Close]

BLAST of CSPI03G28440 vs. ExPASy TrEMBL
Match: A0A6J1IZV8 (oligouridylate-binding protein 1B-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479942 PE=4 SV=1)

HSP 1 Score: 802.7 bits (2072), Expect = 7.1e-229
Identity = 400/422 (94.79%), Postives = 415/422 (98.34%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLK QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLK-QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           H+QVTEPLLQEVFGSIG VEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HVQVTEPLLQEVFGSIGLVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240
           FGFVSFRNQQEAQ+AINDL+GKWLGS+QIRCNWAAKGAGVNEDKQ SDTKSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQSAINDLSGKWLGSKQIRCNWAAKGAGVNEDKQSSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNN+APENNLQYTTVYVGNLAPEV+QLDLHRHFHSLGAGVIEEVR QRDKGFGF
Sbjct: 241 EDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRTQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 360
           VRY+THAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGT SNPLPLPA+ASTPGLSA D
Sbjct: 301 VRYSTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTASNPLPLPAMASTPGLSATD 360

Query: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420
           LLAYERQL+++KMGGVHAALMHPQG HP+KQAPMG+GAAAASQALYDGGFQNI++QQLMY
Sbjct: 361 LLAYERQLSLSKMGGVHAALMHPQG-HPLKQAPMGIGAAAASQALYDGGFQNISSQQLMY 420

Query: 421 YQ 423
           YQ
Sbjct: 421 YQ 420

[Close]

BLAST of CSPI03G28440 vs. NCBI nr
Match: XP_004144435.1 (oligouridylate-binding protein 1B [Cucumis sativus] >KGN58457.1 hypothetical protein Csa_001287 [Cucumis sativus])

HSP 1 Score: 846.3 bits (2185), Expect = 1.2e-241
Identity = 422/422 (100.00%), Postives = 422/422 (100.00%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 360
           VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 360

Query: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420
           LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY
Sbjct: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420

Query: 421 YQ 423
           YQ
Sbjct: 421 YQ 422

[Close]

BLAST of CSPI03G28440 vs. NCBI nr
Match: XP_008460320.1 (PREDICTED: oligouridylate-binding protein 1B-like [Cucumis melo])

HSP 1 Score: 844.7 bits (2181), Expect = 3.4e-241
Identity = 421/422 (99.76%), Postives = 421/422 (99.76%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 360
           VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSA D
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSATD 360

Query: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420
           LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY
Sbjct: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420

Query: 421 YQ 423
           YQ
Sbjct: 421 YQ 422

[Close]

BLAST of CSPI03G28440 vs. NCBI nr
Match: KAA0053515.1 (oligouridylate-binding protein 1B-like [Cucumis melo var. makuwa] >TYK19110.1 oligouridylate-binding protein 1B-like [Cucumis melo var. makuwa])

HSP 1 Score: 827.4 bits (2136), Expect = 5.6e-236
Identity = 421/456 (92.32%), Postives = 421/456 (92.32%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQ-------------------------- 60
           MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQ                          
Sbjct: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQVSTSSHPLIYILSFDSFLFLVDFELD 60

Query: 61  --------IEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVR 120
                   IEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVR
Sbjct: 61  CFLMERREIEPIPSGNLPPGFDASTCRSVYVGNIHIQVTEPLLQEVFGSIGPVEGCKLVR 120

Query: 121 KEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLS 180
           KEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLS
Sbjct: 121 KEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIKVNWAYASSQREDTSGHFNIFVGDLS 180

Query: 181 PEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGS 240
           PEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGS
Sbjct: 181 PEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGFGFVSFRNQQEAQNAINDLTGKWLGS 240

Query: 241 RQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNL 300
           RQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNL
Sbjct: 241 RQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSEDGKESVNNDAPENNLQYTTVYVGNL 300

Query: 301 APEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQ 360
           APEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQ
Sbjct: 301 APEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFVRYNTHAEAALAIQMGNTRSFLCGRQ 360

Query: 361 IKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAADLLAYERQLAITKMGGVHAALMHPQGP 420
           IKCSWGSKPTPPGTTSNPLPLPAVASTPGLSA DLLAYERQLAITKMGGVHAALMHPQGP
Sbjct: 361 IKCSWGSKPTPPGTTSNPLPLPAVASTPGLSATDLLAYERQLAITKMGGVHAALMHPQGP 420

Query: 421 HPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 423
           HPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ
Sbjct: 421 HPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMYYQ 456

[Close]

BLAST of CSPI03G28440 vs. NCBI nr
Match: XP_038896645.1 (oligouridylate-binding protein 1B-like isoform X1 [Benincasa hispida])

HSP 1 Score: 826.6 bits (2134), Expect = 9.5e-236
Identity = 413/422 (97.87%), Postives = 417/422 (98.82%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLK QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLK-QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQ SDTKSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300
           EDGKESVNN+APENNLQYTTVYVGNLAPEV+QLDLHRHFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 EDGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 360
           VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGT SNPLPLPAVASTPGLSA D
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTASNPLPLPAVASTPGLSATD 360

Query: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420
           LLAYERQLAI+KMGGVHAALMHPQG HPMKQAPMGMGAAAASQALYDGGFQN+AAQQLMY
Sbjct: 361 LLAYERQLAISKMGGVHAALMHPQGHHPMKQAPMGMGAAAASQALYDGGFQNVAAQQLMY 420

Query: 421 YQ 423
           YQ
Sbjct: 421 YQ 421

[Close]

BLAST of CSPI03G28440 vs. NCBI nr
Match: XP_038896649.1 (oligouridylate-binding protein 1B-like isoform X2 [Benincasa hispida])

HSP 1 Score: 820.5 bits (2118), Expect = 6.8e-234
Identity = 412/422 (97.63%), Postives = 416/422 (98.58%), Query Frame = 0


Query: 1   MQHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60
           MQHQRLK QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI
Sbjct: 1   MQHQRLK-QQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 60

Query: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120
           HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI
Sbjct: 61  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 120

Query: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180
           KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG
Sbjct: 121 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 180

Query: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 240
           FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQ SDTKSVVELSNGSS
Sbjct: 181 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQSSDTKSVVELSNGSS 240

Query: 241 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300
            DGKESVNN+APENNLQYTTVYVGNLAPEV+QLDLHRHFHSLGAGVIEEVRIQRDKGFGF
Sbjct: 241 -DGKESVNNEAPENNLQYTTVYVGNLAPEVTQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 300

Query: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 360
           VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGT SNPLPLPAVASTPGLSA D
Sbjct: 301 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTASNPLPLPAVASTPGLSATD 360

Query: 361 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 420
           LLAYERQLAI+KMGGVHAALMHPQG HPMKQAPMGMGAAAASQALYDGGFQN+AAQQLMY
Sbjct: 361 LLAYERQLAISKMGGVHAALMHPQGHHPMKQAPMGMGAAAASQALYDGGFQNVAAQQLMY 420

Query: 421 YQ 423
           YQ
Sbjct: 421 YQ 420

[Close]

BLAST of CSPI03G28440 vs. TAIR 10
Match: AT1G17370.1 (oligouridylate binding protein 1B )

HSP 1 Score: 693.0 bits (1787), Expect = 1.5e-199
Identity = 344/422 (81.52%), Postives = 373/422 (88.39%), Query Frame = 0


Query: 4   QRLK---QQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 63
           QRLK   QQQQ +MQQAL+QQQSLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNI
Sbjct: 2   QRLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI 61

Query: 64  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 123
           HIQVTEPLLQEVF   GPVE CKL+RKEKSSYGFVHYFDRRSA LAILSLNGRHLFGQPI
Sbjct: 62  HIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI 121

Query: 124 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 183
           KVNWAYAS QREDTS HFNIFVGDLSPEVTDAMLF CFS Y +CSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRG 181

Query: 184 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 243
           FGFVSFRNQQ+AQ AI+++TGKWLGSRQIRCNWA KGA   EDKQ SD+KSVVEL++G S
Sbjct: 182 FGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSGVS 241

Query: 244 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 303
           EDGK++ N +APENN QYTTVYVGNLAPEVSQ+DLHRHFHSLGAGVIEEVR+QRDKGFGF
Sbjct: 242 EDGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGF 301

Query: 304 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 363
           VRY+TH EAALAIQMGNT S+L GRQ+KCSWGSKPTP GT SNPLP PA A  PG SA+D
Sbjct: 302 VRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASD 361

Query: 364 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 423
           LLAYERQLA++KM G++  + HPQG H  KQA   MGA  ++QA+YDGG+QN  AQQLMY
Sbjct: 362 LLAYERQLAMSKMAGMNPMMHHPQGQHAFKQA--AMGATGSNQAIYDGGYQN--AQQLMY 419

[Close]

BLAST of CSPI03G28440 vs. TAIR 10
Match: AT1G17370.2 (oligouridylate binding protein 1B )

HSP 1 Score: 686.0 bits (1769), Expect = 1.9e-197
Identity = 342/422 (81.04%), Postives = 371/422 (87.91%), Query Frame = 0


Query: 4   QRLK---QQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 63
           QRLK   QQQQ +MQQAL+QQQSLYHPGLLAPPQIEPIPSGNLPPGFD STCRSVYVGNI
Sbjct: 2   QRLKQQQQQQQVMMQQALMQQQSLYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNI 61

Query: 64  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 123
           HIQVTEPLLQEVF   GPVE CKL+RKEKSSYGFVHYFDRRSA LAILSLNGRHLFGQPI
Sbjct: 62  HIQVTEPLLQEVFAGTGPVESCKLIRKEKSSYGFVHYFDRRSAGLAILSLNGRHLFGQPI 121

Query: 124 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 183
           KVNWAYAS QREDTS HFNIFVGDLSPEVTDAMLF CFS Y +CSDARVMWDQKTGRSRG
Sbjct: 122 KVNWAYASGQREDTSSHFNIFVGDLSPEVTDAMLFTCFSVYPTCSDARVMWDQKTGRSRG 181

Query: 184 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 243
           FGFVSFRNQQ+AQ AI+++TGKWLGSRQIRCNWA KGA   EDKQ SD+KSVVEL++G  
Sbjct: 182 FGFVSFRNQQDAQTAIDEITGKWLGSRQIRCNWATKGATSGEDKQSSDSKSVVELTSG-- 241

Query: 244 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 303
            DGK++ N +APENN QYTTVYVGNLAPEVSQ+DLHRHFHSLGAGVIEEVR+QRDKGFGF
Sbjct: 242 -DGKDTTNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGF 301

Query: 304 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 363
           VRY+TH EAALAIQMGNT S+L GRQ+KCSWGSKPTP GT SNPLP PA A  PG SA+D
Sbjct: 302 VRYSTHVEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASD 361

Query: 364 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAAQQLMY 423
           LLAYERQLA++KM G++  + HPQG H  KQA   MGA  ++QA+YDGG+QN  AQQLMY
Sbjct: 362 LLAYERQLAMSKMAGMNPMMHHPQGQHAFKQA--AMGATGSNQAIYDGGYQN--AQQLMY 416

[Close]

BLAST of CSPI03G28440 vs. TAIR 10
Match: AT3G14100.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 669.1 bits (1725), Expect = 2.4e-192
Identity = 332/422 (78.67%), Postives = 370/422 (87.68%), Query Frame = 0


Query: 2   QHQRLKQQQQALMQQALLQQQSLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNIH 61
           QHQ+ +QQQ  + QQAL+QQ SLYHPG+LAPPQ+EP+PSGNLPPGFD STCRSVYVGNIH
Sbjct: 8   QHQQQQQQQAMMQQQALMQQHSLYHPGVLAPPQLEPVPSGNLPPGFDPSTCRSVYVGNIH 67

Query: 62  IQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 121
            QVTEPLLQE+F S GPVE  KL+RK+KSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK
Sbjct: 68  TQVTEPLLQEIFTSTGPVESSKLIRKDKSSYGFVHYFDRRSAALAILSLNGRHLFGQPIK 127

Query: 122 VNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRGF 181
           VNWAYA+ QREDTS HFNIFVGDLSPEVTDA L+  FS +SSCSDARVMWDQKTGRSRGF
Sbjct: 128 VNWAYATGQREDTSSHFNIFVGDLSPEVTDATLYQSFSVFSSCSDARVMWDQKTGRSRGF 187

Query: 182 GFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSSE 241
           GFVSFRNQQ+AQ AIN++ GKWL SRQIRCNWA KGA   +DK  SD KSVVEL+ GSSE
Sbjct: 188 GFVSFRNQQDAQTAINEMNGKWLSSRQIRCNWATKGATSGDDKLSSDGKSVVELTTGSSE 247

Query: 242 DGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGFV 301
           DGKE++N + PENN Q+TTVYVGNLAPEV+QLDLHR+FH+LGAGVIEEVR+QRDKGFGFV
Sbjct: 248 DGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKGFGFV 307

Query: 302 RYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAADL 361
           RYNTH EAALAIQMGNT+ +L  RQIKCSWG+KPTPPGT SNPLP PA A  PGLSAADL
Sbjct: 308 RYNTHPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLSAADL 367

Query: 362 LAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNI-AAQQLMY 421
           L YERQLA++KM  V+ ALMH QG HP++QA  G+ AA A+ A+YDGGFQN+ AAQQLMY
Sbjct: 368 LNYERQLALSKMASVN-ALMHQQGQHPLRQA-HGINAAGATAAMYDGGFQNVAAAQQLMY 427

Query: 422 YQ 423
           YQ
Sbjct: 428 YQ 427

[Close]

BLAST of CSPI03G28440 vs. TAIR 10
Match: AT1G54080.1 (oligouridylate-binding protein 1A )

HSP 1 Score: 633.3 bits (1632), Expect = 1.4e-181
Identity = 311/424 (73.35%), Postives = 359/424 (84.67%), Query Frame = 0


Query: 2   QHQRLKQQQQALMQQALLQQQ-SLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 61
           Q Q+ +Q QQA++QQA++QQ  SLYHPG++APPQ+EP+PSGNLPPGFD +TCRSVY GNI
Sbjct: 11  QQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNI 70

Query: 62  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 121
           H QVTE LLQE+F S GP+E CKL+RK+KSSYGFVHYFDRR A++AI++LNGRH+FGQP+
Sbjct: 71  HTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPM 130

Query: 122 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCSDARVMWDQKTGRSRG 181
           KVNWAYA+ QREDTS HFNIFVGDLSPEVTDA LF  FSA++SCSDARVMWDQKTGRSRG
Sbjct: 131 KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSDARVMWDQKTGRSRG 190

Query: 182 FGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELSNGSS 241
           FGFVSFRNQQ+AQ AIN++ GKW+ SRQIRCNWA KGA   EDK  SD KSVVEL+NGSS
Sbjct: 191 FGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSS 250

Query: 242 EDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDKGFGF 301
           EDG+E  N DAPENN Q+TTVYVGNL+PEV+QLDLHR F++LGAGVIEEVR+QRDKGFGF
Sbjct: 251 EDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKGFGF 310

Query: 302 VRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGLSAAD 361
           VRYNTH EAALAIQMGN + FL  RQI+CSWG+KPTP GT SNPLP PA AS P LSA D
Sbjct: 311 VRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLSAMD 370

Query: 362 LLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAA--QQL 421
           LLAYERQLA+ K        MHPQ  H ++QA +G+  A  + A+YDGG+QN+AA  QQL
Sbjct: 371 LLAYERQLALAK--------MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAAHQQL 426

Query: 422 MYYQ 423
           MYYQ
Sbjct: 431 MYYQ 426

[Close]

BLAST of CSPI03G28440 vs. TAIR 10
Match: AT1G54080.2 (oligouridylate-binding protein 1A )

HSP 1 Score: 627.5 bits (1617), Expect = 7.9e-180
Identity = 311/428 (72.66%), Postives = 359/428 (83.88%), Query Frame = 0


Query: 2   QHQRLKQQQQALMQQALLQQQ-SLYHPGLLAPPQIEPIPSGNLPPGFDASTCRSVYVGNI 61
           Q Q+ +Q QQA++QQA++QQ  SLYHPG++APPQ+EP+PSGNLPPGFD +TCRSVY GNI
Sbjct: 11  QQQQQQQHQQAMIQQAMMQQHPSLYHPGVMAPPQMEPLPSGNLPPGFDPTTCRSVYAGNI 70

Query: 62  HIQVTEPLLQEVFGSIGPVEGCKLVRKEKSSYGFVHYFDRRSAALAILSLNGRHLFGQPI 121
           H QVTE LLQE+F S GP+E CKL+RK+KSSYGFVHYFDRR A++AI++LNGRH+FGQP+
Sbjct: 71  HTQVTEILLQEIFASTGPIESCKLIRKDKSSYGFVHYFDRRCASMAIMTLNGRHIFGQPM 130

Query: 122 KVNWAYASSQREDTSGHFNIFVGDLSPEVTDAMLFACFSAYSSCS----DARVMWDQKTG 181
           KVNWAYA+ QREDTS HFNIFVGDLSPEVTDA LF  FSA++SCS    DARVMWDQKTG
Sbjct: 131 KVNWAYATGQREDTSSHFNIFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTG 190

Query: 182 RSRGFGFVSFRNQQEAQNAINDLTGKWLGSRQIRCNWAAKGAGVNEDKQGSDTKSVVELS 241
           RSRGFGFVSFRNQQ+AQ AIN++ GKW+ SRQIRCNWA KGA   EDK  SD KSVVEL+
Sbjct: 191 RSRGFGFVSFRNQQDAQTAINEMNGKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELT 250

Query: 242 NGSSEDGKESVNNDAPENNLQYTTVYVGNLAPEVSQLDLHRHFHSLGAGVIEEVRIQRDK 301
           NGSSEDG+E  N DAPENN Q+TTVYVGNL+PEV+QLDLHR F++LGAGVIEEVR+QRDK
Sbjct: 251 NGSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDK 310

Query: 302 GFGFVRYNTHAEAALAIQMGNTRSFLCGRQIKCSWGSKPTPPGTTSNPLPLPAVASTPGL 361
           GFGFVRYNTH EAALAIQMGN + FL  RQI+CSWG+KPTP GT SNPLP PA AS P L
Sbjct: 311 GFGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSL 370

Query: 362 SAADLLAYERQLAITKMGGVHAALMHPQGPHPMKQAPMGMGAAAASQALYDGGFQNIAA- 421
           SA DLLAYERQLA+ K        MHPQ  H ++QA +G+  A  + A+YDGG+QN+AA 
Sbjct: 371 SAMDLLAYERQLALAK--------MHPQAQHSLRQAGLGVNVAGGTAAMYDGGYQNVAAA 430

Query: 422 -QQLMYYQ 423
            QQLMYYQ
Sbjct: 431 HQQLMYYQ 430

The following BLAST results are available for this feature:

BLAST of CSPI03G28440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQI9	2.2e-198	81.52	Oligouridylate-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=UBP1B PE=1 ...	[more]
Q9LJH8	3.3e-191	78.67	Oligouridylate-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=UBP1C PE=1 ...	[more]
Q9SYG4	2.0e-180	73.35	Oligouridylate-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=UBP1A PE=1 ...	[more]
Q9M427	1.4e-176	75.36	Oligouridylate-binding protein 1 OS=Nicotiana plumbaginifolia OX=4092 GN=UBP1 PE...	[more]
Q6YZW2	5.1e-139	61.45	RNA-binding protein 208 OS=Oryza sativa subsp. japonica OX=39947 GN=RBP-208 PE=1...	[more]

BLAST of CSPI03G28440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCP1	5.6e-242	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G645950 PE=4 SV=1	[more]
A0A1S3CDG5	1.6e-241	99.76	oligouridylate-binding protein 1B-like OS=Cucumis melo OX=3656 GN=LOC103499180 P...	[more]
A0A5A7UIJ8	2.7e-236	92.32	Oligouridylate-binding protein 1B-like OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1D4M7	6.5e-230	95.27	oligouridylate-binding protein 1B-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1IZV8	7.1e-229	94.79	oligouridylate-binding protein 1B-like isoform X1 OS=Cucurbita maxima OX=3661 GN...	[more]

BLAST of CSPI03G28440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144435.1	1.2e-241	100.00	oligouridylate-binding protein 1B [Cucumis sativus] >KGN58457.1 hypothetical pro...	[more]
XP_008460320.1	3.4e-241	99.76	PREDICTED: oligouridylate-binding protein 1B-like [Cucumis melo]	[more]
KAA0053515.1	5.6e-236	92.32	oligouridylate-binding protein 1B-like [Cucumis melo var. makuwa] >TYK19110.1 ol...	[more]
XP_038896645.1	9.5e-236	97.87	oligouridylate-binding protein 1B-like isoform X1 [Benincasa hispida]	[more]
XP_038896649.1	6.8e-234	97.63	oligouridylate-binding protein 1B-like isoform X2 [Benincasa hispida]	[more]

BLAST of CSPI03G28440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G17370.1	1.5e-199	81.52	oligouridylate binding protein 1B	[more]
AT1G17370.2	1.9e-197	81.04	oligouridylate binding protein 1B	[more]
AT3G14100.1	2.4e-192	78.67	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G54080.1	1.4e-181	73.35	oligouridylate-binding protein 1A	[more]
AT1G54080.2	7.9e-180	72.66	oligouridylate-binding protein 1A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 139..212 e-value: 7.4E-24 score: 95.2 coord: 54..123 e-value: 4.8E-17 score: 72.6 coord: 260..330 e-value: 1.0E-15 score: 68.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 55..121 e-value: 5.2E-13 score: 48.6 coord: 261..327 e-value: 3.0E-11 score: 43.0 coord: 140..210 e-value: 9.4E-18 score: 63.8
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 138..216 score: 17.369957
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 259..334 score: 14.709315
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 53..127 score: 15.101589
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 236..338 e-value: 1.2E-20 score: 75.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..136 e-value: 1.9E-23 score: 84.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 137..216 e-value: 2.1E-24 score: 87.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..252
None	No IPR available	PANTHER	PTHR47640:SF34	OLIGOURIDYLATE-BINDING PROTEIN 1B-LIKE ISOFORM X1	coord: 2..422
None	No IPR available	PANTHER	PTHR47640	TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED	coord: 2..422
None	No IPR available	CDD	cd12352	RRM1_TIA1_like	coord: 55..125 e-value: 1.41442E-36 score: 126.648
None	No IPR available	CDD	cd12619	RRM2_PUB1	coord: 139..213 e-value: 7.20132E-52 score: 166.529
None	No IPR available	CDD	cd12354	RRM3_TIA1_like	coord: 259..334 e-value: 1.06979E-34 score: 121.574
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 52..215
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 251..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G28440.1	CSPI03G28440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding