CSPI03G28220 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAATGGAAGCATCTGTTCGATGAGGTGATCGTTTATGCCATTTCATACCTGGAAAAGGCTGATATATTTATGATTGTTTGTTAGCTATAAATTTTCATCTGATGTAGTACTTTTCAGCAGTTTTCCTACCCGACCTTTTGTTTACAGCTTGTGGAATGATTTAAAAGTTGGCCTGGTTACTCTATGTTTACTAAGTTGATGTTATATCAATCATATCTTGGCCTATACAAGGGTCGTAGTGAAGTTAGAGTCTGTTGGAAAGTGGATTTTCTAGTACTTAGAAAGTCATTTAAGCAAACCCTTCAATGAAGGTAGCTTATTTGGAATATTGTTGAAGTTTTCAAGTAATTAGAAAGTCAACCAGAATAAGTTCTTACACCCTTGTATTAGAAGCTAAAGCACACAAATTCTCAAATTGAATTATATCTCTAGGTGAAGGGACTGGCACAACAACTAACAAAATTACTAAATCTATTTTAGTAACCATTTTGTTTTTTGTTTTTAAAAAATAAGTTATACCTTGCCCATTCCATACAATGATTTGCATCATTCTTATGCGCTATTGTTGTGGAATGATTTGCATCATTCTTATGCGCTATTGTTGAATACAAGCAAGCTTTTAAAACTTTTTTTTTTAGTTTTCAAAATTTTGCTTTTTTTTTAAACCATTGGTAAAAGTTAGATGGAAGTGTAAGTAGTGTTATAGACTTAATTTTTAAATACAAATGCAAAAGAAATACCAAAGGGAATCTATGTAATTTTCTTTTTGTTTATTTTCTATCAACGATTCTGTTTTATTTTCATGAATGAAATTATTGATCCCAACTGGAGACGAATATTACTTCCCGTCTTCAACTCTGTCACATAGGACTCAAATTGGGTTTACCAACCAGTACCCATGCAGATCAGATGCATCAGAATAGGTGTGTGAATTGATCAGTTATAGTTGATTGAGTTTTTAATTTGATCCGAAGCATATATGACATTCAAAGTCATCCCATTTTTCTCCCGAGAAAAGGGTTGACTGGTTTCTTCCAGAAAAACATATAGACATGGGATATGGCGCGATTGAATTACCTAATTTTATGATTTCTCTGAATGGACTAGTCTTTGTATGCCTATGCAGATAGATTATGGGATCATTTTTAGATGGTGAGAAGGTTAAAACTAAAAGTGCAGTCGCAAATCTTGTTTATGTGGATGCCAGTTCAACTATTATTCCACCTTCGAACGTATCTTGCATTTGAATATTATTGTATAACAGGTGGATTCTGGTTGTACCCCTATTGGCATGGAGAAATATTAGGATTTTTTAATGAGCTGTTGGTTGAAAATGTTGTATAGATATTATATATTTATATCTATGCTCTTCATCTTCAGGAATTGAAGTTGCATTTGAGATGTGATAAACTGTCTTTGTATTAGAAATATCTTTTCACTTGCTGTGGACAGGTGGAAGATTTGTGAAATAGACAGGATAAAAAATGAAACCTACCGGCTCTAGTTTTGCTTCCACGTGAATCTTTACCTTGTGGTGTAGATGGATGGGGGAAATAACCCAAAATAACAATATAGTTGGAGAACGGACAGTATCTTGGAGTTAAGCTTGATTGATATGGAAATTGAAAATTCCTTTTCTTTTCTTCCATTTCTTCACGGCTTGGATTTGACGTAAATTTTCAATTGGGAAAGGAAGTGCTTGATGATTGTCTTGGATTTTGCTTGTACTGGTTTGTTTGGTGCATCGGAAGCAAGTAAGATGTGACAGACCACCACATAGACACAACACACACTTTCTTATTCGGAATCCTGATTTCTAACAATGCCTTGAATTCGACTTACTTCCCACTGTCTATTAATTAGAATGGAATTTTGTTTGGACTTGATTTTTTTTTATTAGTTAGGGAGTGTTTGGGGGCAACAAGTTGTAAATTTATAGTAAAAGGAGTCGATCAAGCACGAAATTCGTATTATTTAAGCGTGGGCTCACAAACTTCTTAGAACCATATGTAGAGAAGGGTTTTTAGAGTTGGATTTGGTATAATGATTTTCTCCACTGAGACTAGTGACTATTGTTAATGACCACCCATTGGTGACAATTGCTGGTGACAAGTTGCCTAGTTCTCAAGCTTGAATCATAGAGTTCATTGTTGGTTGTTGGTGGTTACTATTTCTACTACTTGATTTGATTGGTTTCAATTGCTGTTCACTGATCTCTAGTCTTAGGAGTCACTAGCAGTGACCAACAACCTCTAACAATGTTTATAACCAACTTTCAAACATTTAACGAAATCAGTAGTATATGTTGTTTAATATTCGTTAATTTAACATTCGTAAAGCTTTTTTTTTTTTTTTTCTGCATATTGCAAATCATACAAAAATATGTAATTGAACAAAAGAGTTTTTTTAATTATAAAAGTTTTCCTTGGTCAAATGTTGAAATGAAATTATAATCTTAAAAAAATGTCTTTTTGAACAAGCCGAATGTAAAACAATTTGTGTTTGTGTGTTGTTTCTTAGAGGGCAAGAAGAGTGGTGTTGTTGAAGATGATCAAGAAGACAATGAAAAAACAAATAGAAAGGGGACAGGTGCTCCAAAACCCAAAGCATATGGTGAGGTGTAAGAAAAGTAGAATATTTAAGTGTCCACCTTGCAATCTTCGAGGAACTTCCCCTCCCACCAGAAGCTAAAACCCCCCCATCTTGGCCTTCCTTTTTTACCCATAAACATAATTAGAAAAATCAACGGACAACAATGGAAATGGAGAAGAAGAAGGTGAAATTAGTATTAAGGATGCTGCTGTTACTGCTGCTTGTTCTTGTTGGTATTGTGAAGGCTAATGAAGAAGCAGCAAATAACATATATTCAGAAACATCAACACCAAATCCTCCAAACTCCTATTGGGAAGAAGTTCGAAAGGTGGTGAATAAAGCCTACACCTATCTGTTTCCTCCAAAAATAGAGTAAGTAATCTCCATTAATTTGGTTCCTGAACTCATTAATTAGTTACTAATAAAGGGGTTTGGGTTTTAGTTTCCGACCAGGAAAGGCTGTAGAAGATGATTCTGGAGTGAGTGTGAAGAATGGGAATGTTAATGTGAAGGACGCTGTTACAAAGAGCTTCGAAAAGACGAAAGAAATGGTGGAGGATTCCGCTAAAGCTGCCGCCCAAACGCTTCAAAAACCACCACCCCATTCCGAACTCTAGGAATACCAATTCCATCCCTTCCTCTTTCTTCTATAATTCTTGTAATGTCTTCTTGTTATTTGTTTGTTTTTGGTGAATGATGAATTATATGCTCTACAAGATTTAGATGTTTAAGGATGGGAATATGGAACTCTGCCACCACTCCAATGGATTGGGCTCCCATTTTAACCCATACATCATTCTCTCTCCATATATTTTAGTGTTTTTTTTCCTTTGGTC TAATGGAAGCATCTGTTCGATGAGAGGGCAAGAAGAGTGGTGTTGTTGAAGATGATCAAGAAGACAATGAAAAAACAAATAGAAAGGGGACAGGTGCTCCAAAACCCAAAGCATATGGTGAGGTGTAAGAAAAGTAGAATATTTAAGTGTCCACCTTGCAATCTTCGAGGAACTTCCCCTCCCACCAGAAGCTAAAACCCCCCCATCTTGGCCTTCCTTTTTTACCCATAAACATAATTAGAAAAATCAACGGACAACAATGGAAATGGAGAAGAAGAAGGTGAAATTAGTATTAAGGATGCTGCTGTTACTGCTGCTTGTTCTTGTTGGTATTGTGAAGGCTAATGAAGAAGCAGCAAATAACATATATTCAGAAACATCAACACCAAATCCTCCAAACTCCTATTGGGAAGAAGTTCGAAAGGTGGTGAATAAAGCCTACACCTATCTGTTTCCTCCAAAAATAGATTTCCGACCAGGAAAGGCTGTAGAAGATGATTCTGGAGTGAGTGTGAAGAATGGGAATGTTAATGTGAAGGACGCTGTTACAAAGAGCTTCGAAAAGACGAAAGAAATGGTGGAGGATTCCGCTAAAGCTGCCGCCCAAACGCTTCAAAAACCACCACCCCATTCCGAACTCTAGGAATACCAATTCCATCCCTTCCTCTTTCTTCTATAATTCTTGTAATGTCTTCTTGTTATTTGTTTGTTTTTGGTGAATGATGAATTATATGCTCTACAAGATTTAGATGTTTAAGGATGGGAATATGGAACTCTGCCACCACTCCAATGGATTGGGCTCCCATTTTAACCCATACATCATTCTCTCTCCATATATTTTAGTGTTTTTTTTCCTTTGGTC ATGGAAATGGAGAAGAAGAAGGTGAAATTAGTATTAAGGATGCTGCTGTTACTGCTGCTTGTTCTTGTTGGTATTGTGAAGGCTAATGAAGAAGCAGCAAATAACATATATTCAGAAACATCAACACCAAATCCTCCAAACTCCTATTGGGAAGAAGTTCGAAAGGTGGTGAATAAAGCCTACACCTATCTGTTTCCTCCAAAAATAGATTTCCGACCAGGAAAGGCTGTAGAAGATGATTCTGGAGTGAGTGTGAAGAATGGGAATGTTAATGTGAAGGACGCTGTTACAAAGAGCTTCGAAAAGACGAAAGAAATGGTGGAGGATTCCGCTAAAGCTGCCGCCCAAACGCTTCAAAAACCACCACCCCATTCCGAACTCTAG MEMEKKKVKLVLRMLLLLLLVLVGIVKANEEAANNIYSETSTPNPPNSYWEEVRKVVNKAYTYLFPPKIDFRPGKAVEDDSGVSVKNGNVNVKDAVTKSFEKTKEMVEDSAKAAAQTLQKPPPHSEL* Homology
BLAST of CSPI03G28220 vs. ExPASy TrEMBL
Match: A0A0A0L904 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G642710 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60 Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CSPI03G28220 vs. ExPASy TrEMBL
Match: A0A5A7VE77 (Putative transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G00220 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.6e-52 Identity = 113/128 (88.28%), Postives = 123/128 (96.09%), Query Frame = 0
BLAST of CSPI03G28220 vs. ExPASy TrEMBL
Match: A0A1S3CDE0 (uncharacterized protein LOC103499155 OS=Cucumis melo OX=3656 GN=LOC103499155 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 5.6e-52 Identity = 113/128 (88.28%), Postives = 123/128 (96.09%), Query Frame = 0
BLAST of CSPI03G28220 vs. ExPASy TrEMBL
Match: A0A6J1G9K3 (uncharacterized protein LOC111452199 OS=Cucurbita moschata OX=3662 GN=LOC111452199 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 6.9e-26 Identity = 73/118 (61.86%), Postives = 87/118 (73.73%), Query Frame = 0
BLAST of CSPI03G28220 vs. ExPASy TrEMBL
Match: A0A6J1D2A4 (uncharacterized protein LOC111016933 OS=Momordica charantia OX=3673 GN=LOC111016933 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 6.3e-11 Identity = 43/86 (50.00%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of CSPI03G28220 vs. NCBI nr
Match: XP_031737573.1 (uncharacterized protein LOC101222094 [Cucumis sativus] >KGN58430.1 hypothetical protein Csa_000839 [Cucumis sativus]) HSP 1 Score: 241.1 bits (614), Expect = 5.2e-60 Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CSPI03G28220 vs. NCBI nr
Match: XP_008460283.1 (PREDICTED: uncharacterized protein LOC103499155 [Cucumis melo] >KAA0065584.1 putative transmembrane protein [Cucumis melo var. makuwa] >TYK07150.1 putative transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 213.4 bits (542), Expect = 1.2e-51 Identity = 113/128 (88.28%), Postives = 123/128 (96.09%), Query Frame = 0
BLAST of CSPI03G28220 vs. NCBI nr
Match: KAG6571254.1 (hypothetical protein SDJN03_30169, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 128.3 bits (321), Expect = 4.9e-26 Identity = 79/131 (60.31%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of CSPI03G28220 vs. NCBI nr
Match: KAG6571257.1 (hypothetical protein SDJN03_30172, partial [Cucurbita argyrosperma subsp. sororia] >KAG6571261.1 hypothetical protein SDJN03_30176, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.1 bits (318), Expect = 1.1e-25 Identity = 79/131 (60.31%), Postives = 94/131 (71.76%), Query Frame = 0
BLAST of CSPI03G28220 vs. NCBI nr
Match: XP_022948557.1 (uncharacterized protein LOC111452199 [Cucurbita moschata]) HSP 1 Score: 126.7 bits (317), Expect = 1.4e-25 Identity = 73/118 (61.86%), Postives = 87/118 (73.73%), Query Frame = 0
BLAST of CSPI03G28220 vs. TAIR 10
Match: AT5G64820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.3e-05 Identity = 30/114 (26.32%), Postives = 57/114 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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