CSPI03G27770 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCAAATCCCCATTTGTATCTTCTAGAATGAACACTGCTTCAGATTCTCCATTATCTTCATCTTTATACCATTTCCATTCCTTCTCCTCTTCCTCAATTCCCATTCCCAATTCTTATCTTCATAAAATGGGATTTCAACCCCACCCCCTCGGTTAAACTTCCATTCAAACCCCTCTGGATCCACTCTCAATCTCTCCATCATGGCCAAATTTAATCCCTATATTCAACACACTCCTTCCTCATCCTCATCTCCTCAACCTCCCAAAAGTTTGTCTCCCTTAACTCCACACTTCATTGTTGTCTCTCTTTTCCTTTATCGTTTTTATCTGTTCTCTTTAATTTTTTCTTTTCAGGAGATAGGATGTGGGATGCATTGGGTCGCTGCGGGAAGATATTGGAAGGTTATGGGAAAATGGCAGGGGAAGCTGCTGAAAACGTTTGGCATCACAGTTAGTTTTTTTTTTTTTTTTTTTTTTATCAATTTAATTTTGTTTTTAGTGTTCGAATTTATATTTTTAAATGTTACTATACTCTTAAAATTGGTTTTGCATAGTTGAAACTATGATTTTGGTGATTTTGAATATGAGAAGAGTGACTAACCATTTCAAAACTAATCTGCAGTGTGTCCGTAGATGCTGAAATATAATTTAGTGTTTAATTTTACTTTTAAGTGCAGTTTGTGATGCCATCAAATTTGGTTTTGAATCATAAAAAAGCATGTTGATGATTTTGAAAATGACAAAAATAATTTTAATCATTTCATAAACACTTTCAAACATGTTTCAAATTTTTGGTATTCCGATAGAAGATGATTTGTTACATTGATGAACATCCTAATAGTGAAATAGTTCATGTGGGATCAAGTTTCTAATTGACTATGTTTTTAATAAATGATAGTTTAAATACTAATTTGGTCTTATAATTTTAAAATGTTTATTTGGTTATTTTTACTTTTAACTTTGGTTCATTTTAGTTACTGTAGTTTTGAAAAAATTTGTCCTTCCAAAAATTAAATAAAACAAAAAATGAATTGAATAAAAGGATCACTTTTTAAAAGTACAACCAAAGTTGTAAGTACATAAACCAAAGTTTAAAGCATGAGGATTATATGAAAGTACAAGATCTAAAATAAACCAAAGTTGAAAATCTTCAAACTAAAGTTGGAAGTATAAGGACCAAAAACAAATCATGTTGAAAGTGCAAGAATCAAAGTAGTATTTTAGCCCAAACATTAACATCTCCATTCATTGGAGGTACGTGATTGAGGGAAGCTGAAAAATAACATGTAAAATGAGATCAGTCTTATTTTGGAGGGCCTCTAATGTTCTAATATCGTTTGCTTTTAGTTTTATCGAGAATAATACCTTGAATGTTGGCATATTGGCTCCTAATATGCAATATACTTTTATCAACAGTAAAAGTTAGTCCTAGCATTGGTGATGTTGCAAAGGCCAGGTTTGTTCAAGGAACCAAATTACTTGCTGAAGGAGGACCTGAAAGATTATTCCACCATACATTTGGTGTTATTCCTGAAGAAAAATACTTGCACTCATATGCTTGCTATTTGGCAACTCCCACTGGTCCTGTGAATGGGACTCTGTACATAACCACAAAAAGATTGGCTTTCTGTAGTGAATCCCCTCTTTATTGTTCTTCATCTCCTCCTGGGCAGTCAGAGTGGCTCTATTACAAGGTATGTTCGACTCATTACTATTGTGGATGTTGTGGTTTTGATATAACAGAAATAGAAGTATTTCTCAAATATTTATTAAGTTTCTCATCTTTTTGTATTGTCTTGAGTGGAATACTCTAAAGTTTTCCTGTATTATAAGCATTAAAATGTGTTCTACTCCTAGGACAGAGTGAATAATGAATAAAAAGATGGTTGAAAACTTTGAAATACGGTTATGGTCTCCATACTTTGAAGTTTGTTTAATTTTAGTTCTTGTACAATCTAATCCAGCTTAATTTAGTCCCTCAAAGTTCATTCTTTTTACCTAGATTGATTAAATAATAATCATGCAAGAAAATAAAATATGTTGAATATGTTTTTAAAGTTTATTGTAAAAATGTCACAGATAACATTTTTTAATTAAAATAAACAATAAACTAGCTTTGGGGATTAAATTTAAGATTTGGTAAAAGTGCATGGATTAAAATTGAACAAACCAAAAGGACATTTTAACCTAAAACAAATCATTACAAAAGGTCGCTTGAGCCCTGATTCGTGCTTAGCTACTTGAGTAACACTACAGATTATATTGCACAAGACAAAACTTTATCTGCTCTCTATCTCCTTAGGTATCTAAATACTGTTAAATTGAACCAATTGGAATATTGGCATTGAATTAACTATCAGTTGTTTTTGGTTTAATTGCTGCTTTGGTCTATGTATCTTTTGTTTTTACTTCATTTTGGTCTATGTAATTTTAGAAAGGGATCATTTTGGCCCCTTAAAAGTGAAATAAAAATGAAATGAAATTATTAAAATGGTCACTTTTTTAAAGTAGAGGGTTAAACAAACATTTTGACTAAAACCAAAAGTATGGAAACCAAGTAGAATATGGAAGTTGGGGAAGTTTATCTCATGTGTATTTACCCATTTGTAGGTGGTGATAGAGCTGAATCGGGTGGCAAATTTAAGGCCTTCTCCAAATCTTCTCGACCCGTCTGAAAAAGATATTCATTTAGTCACAAAGGATGGACATGAATTCTGGTTCCTGGGGTTTTTATCGTTCAGCAGGGCTTTAAAGAACTTAAATGAGGCATTAAAGGGATCCTCTTCCTAGTTTGTTTGGATGAATCCATATGGTTTGAGAGTTTCTGCCTCCTCTCTACATCCCATGTCTATGTCTTCTTACTTGTGCTTGCGTTTGTTCCTATTTCTTCTTATTGCAACTAACTACTGTCCTCAATAACATGTTGTATCTTGAAAAAGCTGTGTTATGCTAGTGAAAATAAAGAAGAAATGATTTCTTAGTTTTTGTATGGACGGCTTAGCAAACTTTGTTTCTCTCT CCCAAATCCCCATTTGTATCTTCTAGAATGAACACTGCTTCAGATTCTCCATTATCTTCATCTTTATACCATTTCCATTCCTTCTCCTCTTCCTCAATTCCCATTCCCAATTCTTATCTTCATAAAATGGGATTTCAACCCCACCCCCTCGGTTAAACTTCCATTCAAACCCCTCTGGATCCACTCTCAATCTCTCCATCATGGCCAAATTTAATCCCTATATTCAACACACTCCTTCCTCATCCTCATCTCCTCAACCTCCCAAAAGAGATAGGATGTGGGATGCATTGGGTCGCTGCGGGAAGATATTGGAAGGTTATGGGAAAATGGCAGGGGAAGCTGCTGAAAACGTTTGGCATCACATAAAAGTTAGTCCTAGCATTGGTGATGTTGCAAAGGCCAGGTTTGTTCAAGGAACCAAATTACTTGCTGAAGGAGGACCTGAAAGATTATTCCACCATACATTTGGTGTTATTCCTGAAGAAAAATACTTGCACTCATATGCTTGCTATTTGGCAACTCCCACTGGTCCTGTGAATGGGACTCTGTACATAACCACAAAAAGATTGGCTTTCTGTAGTGAATCCCCTCTTTATTGTTCTTCATCTCCTCCTGGGCAGTCAGAGTGGCTCTATTACAAGGTGGTGATAGAGCTGAATCGGGTGGCAAATTTAAGGCCTTCTCCAAATCTTCTCGACCCGTCTGAAAAAGATATTCATTTAGTCACAAAGGATGGACATGAATTCTGGTTCCTGGGGTTTTTATCGTTCAGCAGGGCTTTAAAGAACTTAAATGAGGCATTAAAGGGATCCTCTTCCTAGTTTGTTTGGATGAATCCATATGGTTTGAGAGTTTCTGCCTCCTCTCTACATCCCATGTCTATGTCTTCTTACTTGTGCTTGCGTTTGTTCCTATTTCTTCTTATTGCAACTAACTACTGTCCTCAATAACATGTTGTATCTTGAAAAAGCTGTGTTATGCTAGTGAAAATAAAGAAGAAATGATTTCTTAGTTTTTGTATGGACGGCTTAGCAAACTTTGTTTCTCTCT ATGGCCAAATTTAATCCCTATATTCAACACACTCCTTCCTCATCCTCATCTCCTCAACCTCCCAAAAGAGATAGGATGTGGGATGCATTGGGTCGCTGCGGGAAGATATTGGAAGGTTATGGGAAAATGGCAGGGGAAGCTGCTGAAAACGTTTGGCATCACATAAAAGTTAGTCCTAGCATTGGTGATGTTGCAAAGGCCAGGTTTGTTCAAGGAACCAAATTACTTGCTGAAGGAGGACCTGAAAGATTATTCCACCATACATTTGGTGTTATTCCTGAAGAAAAATACTTGCACTCATATGCTTGCTATTTGGCAACTCCCACTGGTCCTGTGAATGGGACTCTGTACATAACCACAAAAAGATTGGCTTTCTGTAGTGAATCCCCTCTTTATTGTTCTTCATCTCCTCCTGGGCAGTCAGAGTGGCTCTATTACAAGGTGGTGATAGAGCTGAATCGGGTGGCAAATTTAAGGCCTTCTCCAAATCTTCTCGACCCGTCTGAAAAAGATATTCATTTAGTCACAAAGGATGGACATGAATTCTGGTTCCTGGGGTTTTTATCGTTCAGCAGGGCTTTAAAGAACTTAAATGAGGCATTAAAGGGATCCTCTTCCTAG MAKFNPYIQHTPSSSSSPQPPKRDRMWDALGRCGKILEGYGKMAGEAAENVWHHIKVSPSIGDVAKARFVQGTKLLAEGGPERLFHHTFGVIPEEKYLHSYACYLATPTGPVNGTLYITTKRLAFCSESPLYCSSSPPGQSEWLYYKVVIELNRVANLRPSPNLLDPSEKDIHLVTKDGHEFWFLGFLSFSRALKNLNEALKGSSS* Homology
BLAST of CSPI03G27770 vs. ExPASy Swiss-Prot
Match: Q9M122 (GEM-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g01600 PE=2 SV=1) HSP 1 Score: 190.7 bits (483), Expect = 1.7e-47 Identity = 89/200 (44.50%), Postives = 129/200 (64.50%), Query Frame = 0
BLAST of CSPI03G27770 vs. ExPASy Swiss-Prot
Match: Q9SE96 (GEM-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FIP1 PE=1 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 6.1e-45 Identity = 85/201 (42.29%), Postives = 131/201 (65.17%), Query Frame = 0
BLAST of CSPI03G27770 vs. ExPASy Swiss-Prot
Match: Q8S8F8 (GLABRA2 expression modulator OS=Arabidopsis thaliana OX=3702 GN=GEM PE=1 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 3.9e-44 Identity = 84/202 (41.58%), Postives = 128/202 (63.37%), Query Frame = 0
BLAST of CSPI03G27770 vs. ExPASy Swiss-Prot
Match: Q9LYV6 (GEM-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=At5g13200 PE=1 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35 Identity = 72/195 (36.92%), Postives = 111/195 (56.92%), Query Frame = 0
BLAST of CSPI03G27770 vs. ExPASy Swiss-Prot
Match: Q9M063 (Putative GEM-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At4g40100 PE=3 SV=2) HSP 1 Score: 139.4 bits (350), Expect = 4.5e-32 Identity = 73/206 (35.44%), Postives = 115/206 (55.83%), Query Frame = 0
BLAST of CSPI03G27770 vs. ExPASy TrEMBL
Match: A0A0A0LCF9 (GRAM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G634340 PE=3 SV=1) HSP 1 Score: 437.6 bits (1124), Expect = 3.0e-119 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CSPI03G27770 vs. ExPASy TrEMBL
Match: A0A1S3CBY7 (GEM-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103499227 PE=3 SV=1) HSP 1 Score: 412.1 bits (1058), Expect = 1.3e-111 Identity = 194/205 (94.63%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of CSPI03G27770 vs. ExPASy TrEMBL
Match: A0A5A7VJT1 (GEM-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold238G00410 PE=3 SV=1) HSP 1 Score: 389.8 bits (1000), Expect = 7.1e-105 Identity = 190/220 (86.36%), Postives = 196/220 (89.09%), Query Frame = 0
BLAST of CSPI03G27770 vs. ExPASy TrEMBL
Match: A0A6J1HGG7 (GEM-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111463872 PE=3 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 2.6e-91 Identity = 160/200 (80.00%), Postives = 179/200 (89.50%), Query Frame = 0
BLAST of CSPI03G27770 vs. ExPASy TrEMBL
Match: A0A6J1HQI2 (GEM-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111466886 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89 Identity = 160/200 (80.00%), Postives = 178/200 (89.00%), Query Frame = 0
BLAST of CSPI03G27770 vs. NCBI nr
Match: XP_004144395.1 (GEM-like protein 2 [Cucumis sativus] >KGN58382.1 hypothetical protein Csa_002552 [Cucumis sativus]) HSP 1 Score: 437.6 bits (1124), Expect = 6.1e-119 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of CSPI03G27770 vs. NCBI nr
Match: XP_008460402.1 (PREDICTED: GEM-like protein 1 [Cucumis melo]) HSP 1 Score: 412.1 bits (1058), Expect = 2.7e-111 Identity = 194/205 (94.63%), Postives = 198/205 (96.59%), Query Frame = 0
BLAST of CSPI03G27770 vs. NCBI nr
Match: KAA0068088.1 (GEM-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104 Identity = 190/220 (86.36%), Postives = 196/220 (89.09%), Query Frame = 0
BLAST of CSPI03G27770 vs. NCBI nr
Match: XP_038887656.1 (GEM-like protein 2 [Benincasa hispida] >XP_038887657.1 GEM-like protein 2 [Benincasa hispida]) HSP 1 Score: 388.7 bits (997), Expect = 3.2e-104 Identity = 183/206 (88.83%), Postives = 194/206 (94.17%), Query Frame = 0
BLAST of CSPI03G27770 vs. NCBI nr
Match: XP_023553639.1 (GEM-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 348.2 bits (892), Expect = 4.9e-92 Identity = 162/200 (81.00%), Postives = 181/200 (90.50%), Query Frame = 0
BLAST of CSPI03G27770 vs. TAIR 10
Match: AT4G01600.1 (GRAM domain family protein ) HSP 1 Score: 190.7 bits (483), Expect = 1.2e-48 Identity = 89/200 (44.50%), Postives = 129/200 (64.50%), Query Frame = 0
BLAST of CSPI03G27770 vs. TAIR 10
Match: AT4G01600.2 (GRAM domain family protein ) HSP 1 Score: 183.7 bits (465), Expect = 1.5e-46 Identity = 91/200 (45.50%), Postives = 129/200 (64.50%), Query Frame = 0
BLAST of CSPI03G27770 vs. TAIR 10
Match: AT1G28200.1 (FH interacting protein 1 ) HSP 1 Score: 182.2 bits (461), Expect = 4.3e-46 Identity = 85/201 (42.29%), Postives = 131/201 (65.17%), Query Frame = 0
BLAST of CSPI03G27770 vs. TAIR 10
Match: AT2G22475.1 (GRAM domain family protein ) HSP 1 Score: 179.5 bits (454), Expect = 2.8e-45 Identity = 84/202 (41.58%), Postives = 128/202 (63.37%), Query Frame = 0
BLAST of CSPI03G27770 vs. TAIR 10
Match: AT5G13200.1 (GRAM domain family protein ) HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36 Identity = 72/195 (36.92%), Postives = 111/195 (56.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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