CSPI03G27610 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G27610
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	AvrRpt-cleavage domain-containing protein
Location	Chr3: 25167690 .. 25172922 (+)
RNA-Seq Expression	CSPI03G27610
Synteny	CSPI03G27610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTAAGCTACCATTCCTCCTCTTTTATCGATTTCACTATTTTACTCTGTATTTCTTTTTATACTCTGTTTGGCTGCTCTGAAAATCTCCGAGTTAGCGGGAAAATACAGAATGAGAGCTTTTTCAAAGTTTTCTTTCCGAACGGAACTATTCCAGCGAGATGTGTTTCTGCTTTTCGTTTACCCTAAACTGATTAGTTAAATTTCAGTATTTGATGAGTGATGATGAACCGAAACCGAATAGTTTTTGAAGATTAAATCAAGAACTGTTCAAAAGCTGAGATGTGAGATAGAACTAGAGTGCTTTCTAGATGTAATTTCAGAAATTAAAAATGGTTTTTCTGTCATAGTCCTCGTACGGTTCGAATTATTGCTTGTTTTTTAATGCTTTTTTCTTCTGTTCATATGCTGGGTTTTGACCTGACTTGTGGTGGGTTTCGCTTTGTGCTTATTTCTTGAAGAAGTGTTCAATCACGAGCATTTGAATTCAATTTTAGAATTAAATCATTGCTACTTTTGGGCCATTCTTCTAGTTCATCGTTATGAAAAAAGATTCGTCCATACTTGTATACATGTGGGGCTTTGGTCGTTTATTATTATTATTATTATTTTATATTTAAACTATTTTTGGGGTATATGACAATCAACTATTCTCTAATCAACCATCTATTTATTTGTTCTTATCTGCTGTATAGTCGTTTTTGGTTTTTTCCATTTTGAATCTTTCGAAAGGACTGTCTTTAGATATGTGTGATTTTTGTTGAATCCTTTACGAACTTCATTAAAATCAAGTTTAATACTCATCTTGTTAATGTTATAGTTCTCATATTGTCCATGTGAAAAAAGCTGACTATTTGTGCAAGACAGCTTAGGAAGATCATTCTTCTTATTCCACATTTGAATCTTCTCTTGTTCAAATACATTAGTTTTATATTATGATTGAACTTCTTGTATTTGCTGTTTTGACATTTGTGTTCAAATTTCTATGGTGTAAATTCTCGAAGGGAAAGGAACAACTATTAGGATTGACAATTATGTTATTTCATCTCAAGATTATTCATAGGCGTGAATTGAGAGTGGATTGTTTTGGATACCATTCAAGCTATTTTTGTGGTTGAAGTTGTCTTTTCTTTGGGGATCGGTTGGTAATATGCAATTGGATATAATGATTCCTCTAAACACTGTCTTGAAGTTTTATTTGTGTGCGTCTGTCGAGTCAGTTGTAGTTAATGATAATTGTTCACTTAAACCAATTTTACCAAATATGTCATCTGTTTTCAGCCAAGCCCAACAACTTCAGAAGTGATCAACCTCTAAACAGATTAACCTCTCTTAACAAACTCTTTTCAACTACTCTCAACCATTAACAAATAAAATAGGGTAACAAACTTCTCTGGTATAGTTATAAAAGTGGTTTGAAATTCTACTGACGGAAGTGTTCTTACATTTTATTTTGATGTGAATAAAATCTCTCGAAGGCTATTCGAAGTGGATGTAGGCTTCAAGAAAGCTGAACCACTATAAAACTTGCTGTATTCTTAGTCCTTTTGATGTCTTATTCCGAAACGATGAACTAAGAAACTTAGGAATAACAATAATAATAAATTATCTAGAGTCAGCTTGAGCGATCGCAAGTTCTTATTTTCAAGCAGGTCCTAAGTCCTAAGTAAGTATAGAGTTTGCTGTTGGAATCTTACAAAAGGTTTAGCAATTCTTAAAGGAGCGTTTGCAAAAATAACAAGAAAAATGTTAAGATAATAGAACTCATGTCTCTACGTTTTCTGAATTGCAAAAAAAAAGTAGTAAATTAAAGCTGTAATCCTTTTTTAACTCTTTGTTAGTCTTTAATAACTCTATGGTAGTAATTTGATATATCTAATTACTTGTCATATTTGGAATATGAAAAAAAAAAAGTGTTATGAACTGCTTTTTTTTTAAAAAAATTGTCATTAAATCACTGATTGACACTAAAATTTAAGCAGATGAAGGTGAATTTGATGGGATGTCATCTAACAACAATACATATATCTGATACCCCAATTAATCTATAGCTTTGCTTATTGGTAATTGACATGGTAATGAAATGGTTGCAAATGAAAGGATAACGAAGCTGCAGTTCCAAAATTTGGTGAATGGGATGATAGGGATGCAAAAGCACCGGAGAACTACACAGCTATTTTCAACAAGGTGCGGGAAGAGCGGCAAGATCAAACAGTGCGAGGGACACCAACACGGACGATTGACAGCACAAACAGCCAAAATCATGAACAGAATCAAAAGGTTAAGCTATCCTCCATTTCTAAAATTATTGAGATTGATATCCTTTGTCTTACATTATTGCCTGCCTTTAAAACTTTTCAGAAATGCTGTTGTTTTCCATGGCCAAGAAAATGATATTGTTCTACATCTTCATTAGCTCAGTTTTACATGGACATGTGAATATATATTTTATTTGAAGGAAAGAATCTGTTGGGCTGCAACAAATATCCTTCTGTGCCATCTAATGTAAGTGTTTGTTTGTGGGCAAATAAAGTTCTGGGAAAAAGACAAAATCCGGGGTGTTTTGGGTATTATTTTTAATTATTACTTGAAATTTTTACTTTTGCTTGTGATGTATTCTTCACTCTAATAATTGTATTGTGAGGTTTGGCTTATTTTGGTTACTATTTATCTATCACCTTAGTTTATGATTGTATGATCATAGAAACCAACCAAACCGAACTAAACCTGAAATCCTGTTTTTATTAAAGTGGTGATTTTGTTAAGAAAACTAATGTTTTCGATTCAATTTTGTTTTAGATCTAGAAACCGAAACCAGGTTGTTTATGTTACATACATATATTTATGTTATATGCTATATATGGTATAAAACTAGATGATCTACTACATATAAAACCTAAAATTGAATCGAGTTTGAATATTTGGGGTTAGATTTGGAGTAAACAAACAGTTCAGGCTTTAGAGTTGGAAAACTTCACAAACTAATCCAATAACCAAAGAACTTTTTTTATGACAGATCCATTTCTCGTGACCTTTTTGCCATATGAAATATCAATTCTATCCTCTCTATCTTCAAATCCTTAATAAACCATTAGTTACTTTTTCTCTCTTCTACAAACTTGTCTGCAGTATAGAGTGAGATCCATGAAAACGAAGATAATCTAAGTTTTACGAAATATTTTTATTTCAAGATCGCATTTATGATAATAGGAGATGAAAGATAGTTTAATAAAACTTTGGAATAGTTCGAAGAAAGTTAGTAGATTATTTAATAAAAGTTGGGAGACCGTTTGATAAAAATTGGAAGATCGATTAATAAAAATTAAAACTTAGGTTATTTTATCTACTATTTTTTCTTTTATGTTTTTTTTTTTCATTTGGTGTCTATTTATTCACCTTTACACTAAATTGATTATGTACTCTGAATTATTAAAAAATAACATATAATGCAACATTCGTCTCAAATGGCTTATGTTTGGGTTAATTAAATATGCATAAATGGACTTGATATTAAAAGTCAACCAATCGTATACTCACATTTTCAGAAAGCGGTCAAGGATTTGACTATCAAGTATCCTATGATCATTTGATAAAAAAAAAACGTCAGATTATATATTTTCTTACATATTTTTCGTGTCAACCTACAACACTAAAAATAAATACTAAAGTAGACCGAGTTAGAAACATAAAAAACTCGAGATTCAAATCAACGGGAGTGGTAAAAAAGAATGACCTGAGATGCTAAAATAGTAATGGAGTATACATAAGTCTTACTGATGTCAAGCTTAAGTGCCCTTTGTTCCTAAAACCCGTCCGGAAAGGAGAACAATTTGAAAGAGAGAAAATGATTGAGTGGAAACTCTTTCTTAAACTGATTTTTTGCAGGAGATTTTAAAATGAACTCTTACATTACCAAATCATAAAAGACTGTGGGATGGTCGATGAATCATAGGAAATTAATACAGTTTACAACCTTTCAATTGGTTTCAAAATCGAGAGTGAGAGTGTTGTAAGAAAAAACAAACAAGGTCGGTGACGTAGGCACGTGCGATAGAAAGAAGGGAAGAAAGCAAATAAACACGTGTCACGCAACTATTGGACATGAGCAAAAGACGTGGCGCCTTTCAGGCTCGGCTCCTCTTTCACTGTCCCCGCAAGAACCCTGGAACTTCCCCTCTGCCGTGTCTCCATTCTCGTCCTCAATCTCAACCTTTTTCTTCATTTCTCCCTTTATAATGCCGATTTTCCCTTCTCTATCCTTTCCATCTCTCAACCTTTAGAATCCTAACTACGAATATCACAAACCCTAGAAGAACTAATCATATAATCAAATCTAATCTATCAACCACCTCAAATTTGCAAGATATTTTTTTCAACCGCTTATTTCAGGTACCCCATCTTCAGATTCGACGTATTTTATTTAATTTTTTAATTGGGGTATCTTCTTTAATCGATCTTAGTTATGATTTCTGGGGTTTATTTTTGGAGAAAAAATGTCTTTGTGAATGTTTTGACCGATGTGAGATTGAAGACTTGACGTTTTGGTTCCTGTAGTTGGGGCAAAAGATCCGATGGAGTAGGTATTGTTTGGAGATGGATTTTTATGATCGGGTATGAATTTTGTGGTTTAGTGTAAGCCGTATGATTAATCCCAAGGTTTGATGTATTTTAATTGTTTGGTGTAACTGATTATTAATGAATGTTTAGGGGGAAAGGGTAGTGGTTGATTTATTATCGATGTGGGGTTTTCTTTTTAATTATAAATCTGGGAACGAAGGGTTTGTTGTTTGACAAGGATTATATTGATGTCTTGGTTCTGAGTTACAGGGATTTGTTTCTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCGAATCTCCTTGTGTTTATTGCATGACTACAGTTCACGCTCATGGTTGTGGTTTTTCTCTCTGTTGAAAGCCATCAATTTCTTTCTTAAAATTTCCTTTGTTCACTTTATTTTACATGATACATCAGCTGGGGTCTTATTGCATTCAGATTTTGAATATATTGGGCTTATGTATTGCAGGTTGCTGGGGAGCTTGAAAATATAGATGAGTACTCAGGCTATGAGGGGACATACCACAAGAGGTTATCATCGTAG

mRNA sequence

ATGGCTGATAACGAAGCTGCAGTTCCAAAATTTGGTGAATGGGATGATAGGGATGCAAAAGCACCGGAGAACTACACAGCTATTTTCAACAAGGTGCGGGAAGAGCGGCAAGATCAAACAGTGCGAGGGACACCAACACGGACGATTGACAGCACAAACAGCCAAAATCATGAACAGAATCAAAAGTTGGGGCAAAAGATCCGATGGAGTAGGTATTGTTTGGAGATGGATTTTTATGATCGGGTTGCTGGGGAGCTTGAAAATATAGATGAGTACTCAGGCTATGAGGGGACATACCACAAGAGGTTATCATCGTAG

Coding sequence (CDS)

ATGGCTGATAACGAAGCTGCAGTTCCAAAATTTGGTGAATGGGATGATAGGGATGCAAAAGCACCGGAGAACTACACAGCTATTTTCAACAAGGTGCGGGAAGAGCGGCAAGATCAAACAGTGCGAGGGACACCAACACGGACGATTGACAGCACAAACAGCCAAAATCATGAACAGAATCAAAAGTTGGGGCAAAAGATCCGATGGAGTAGGTATTGTTTGGAGATGGATTTTTATGATCGGGTTGCTGGGGAGCTTGAAAATATAGATGAGTACTCAGGCTATGAGGGGACATACCACAAGAGGTTATCATCGTAG

Protein sequence

MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQKLGQKIRWSRYCLEMDFYDRVAGELENIDEYSGYEGTYHKRLSS*

Homology

[Close]

BLAST of CSPI03G27610 vs. ExPASy Swiss-Prot
Match: O22633 (Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 5.9e-04
Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 1  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT 49
          M+D    +PKFGEWD  D  + E +T IFNK R+E++     G+P ++
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKS 48

[Close]

BLAST of CSPI03G27610 vs. ExPASy Swiss-Prot
Match: Q8GYN5 (RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.7e-04
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 8   VPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQN 57
           VPKFG+WD+ +  + + YT IFNKVREER         +RT    +S+N
Sbjct: 148 VPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRN 196

[Close]

BLAST of CSPI03G27610 vs. ExPASy TrEMBL
Match: A0A0A0L950 (AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G630240 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.1e-52
Identity = 102/105 (97.14%), Postives = 102/105 (97.14%), Query Frame = 0


Query: 1   MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQN 60
           MADNE AVPKFGEWDD DAKAPENYTAIFNKVREERQDQTVRGTPTR IDSTNSQNHEQN
Sbjct: 1   MADNETAVPKFGEWDDGDAKAPENYTAIFNKVREERQDQTVRGTPTRLIDSTNSQNHEQN 60

Query: 61  QKLGQKIRWSRYCLEMDFYDRVAGELENIDEYSGYEGTYHKRLSS 106
           QKLGQKIRWSRYCLEMDFYDRVAGELENIDEYSGYEGTYHKRLSS
Sbjct: 61  QKLGQKIRWSRYCLEMDFYDRVAGELENIDEYSGYEGTYHKRLSS 105

[Close]

BLAST of CSPI03G27610 vs. ExPASy TrEMBL
Match: A0A6N2AQE8 (AvrRpt-cleavage domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_006924 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-07
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 2   ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ 61
           +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+RT ++T   N E+ Q
Sbjct: 188 SDRGAAVPRFGEWDENDPQSADNYTHIFNKVREEKQGNP-SGTPSRTSNNTQKHNSEEKQ 247

Query: 62  K 63
           +
Sbjct: 248 R 247

[Close]

BLAST of CSPI03G27610 vs. ExPASy TrEMBL
Match: A0A3Q7IYL7 (AvrRpt-cleavage domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101248708 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.5e-07
Identity = 31/61 (50.82%), Postives = 43/61 (70.49%), Query Frame = 0


Query: 2   ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ 61
           +D  AAVP+FGEWD+ D ++ +NYT IFNK REE+Q     GTP+RT ++T   N E+ Q
Sbjct: 188 SDRGAAVPRFGEWDENDPQSADNYTHIFNKFREEKQGNP-SGTPSRTSNNTQKHNSEEKQ 247

Query: 62  K 63
           +
Sbjct: 248 R 247

[Close]

BLAST of CSPI03G27610 vs. ExPASy TrEMBL
Match: M1CPC9 (RIN4c protein OS=Solanum tuberosum OX=4113 GN=102596147 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.8e-07
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 0


Query: 2   ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ 61
           +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q
Sbjct: 190 SDRGAAVPRFGEWDENDPQSADNYTHIFNKVREEKQGNP-SGTPSRASNNTQKHNSEEKQ 248

[Close]

BLAST of CSPI03G27610 vs. ExPASy TrEMBL
Match: M1CPD2 (RIN4c protein OS=Solanum tuberosum OX=4113 GN=102596147 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.8e-07
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 0


Query: 2   ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ 61
           +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+R  ++T   N E+ Q
Sbjct: 153 SDRGAAVPRFGEWDENDPQSADNYTHIFNKVREEKQGNP-SGTPSRASNNTQKHNSEEKQ 211

[Close]

BLAST of CSPI03G27610 vs. NCBI nr
Match: XP_038888923.1 (RPM1-interacting protein 4-like [Benincasa hispida])

HSP 1 Score: 94.7 bits (234), Expect = 5.0e-16
Identity = 51/73 (69.86%), Postives = 56/73 (76.71%), Query Frame = 0


Query: 1  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRG-TPTRTI-DSTNSQNHE 60
          MADNEA VPKFGEWDDRDAKAPENYTAIF KVRE RQ+  +R  TP R+I +STN+QNHE
Sbjct: 1  MADNEATVPKFGEWDDRDAKAPENYTAIFKKVREGRQEPGIRALTPPRSINNSTNNQNHE 60

Query: 61 QNQKLGQKIRWSR 72
           NQK      W R
Sbjct: 61 HNQKKCCCFPWPR 73

[Close]

BLAST of CSPI03G27610 vs. NCBI nr
Match: KAG7036250.1 (hypothetical protein SDJN02_03052 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-11
Identity = 44/65 (67.69%), Postives = 50/65 (76.92%), Query Frame = 0


Query: 1  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDST--NSQNHE 60
          MAD E AVPKFGEW+DRDA  P+NYTAIF KVREERQDQ  R TPT   +S   ++QN E
Sbjct: 1  MADKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGAR-TPTLPQNSNIPDNQNDE 60

Query: 61 QNQKL 64
          QNQK+
Sbjct: 61 QNQKV 64

[Close]

BLAST of CSPI03G27610 vs. NCBI nr
Match: KAG6606311.1 (RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.7 bits (195), Expect = 1.7e-11
Identity = 44/64 (68.75%), Postives = 49/64 (76.56%), Query Frame = 0


Query: 1  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDST--NSQNHE 60
          MAD E AVPKFGEW+DRDA  P+NYTAIF KVREERQDQ  R TPT   +S   ++QN E
Sbjct: 1  MADKEVAVPKFGEWNDRDATPPDNYTAIFTKVREERQDQGAR-TPTLPQNSNIPDNQNDE 60

Query: 61 QNQK 63
          QNQK
Sbjct: 61 QNQK 63

[Close]

BLAST of CSPI03G27610 vs. NCBI nr
Match: XP_015086553.1 (RPM1-interacting protein 4 isoform X1 [Solanum pennellii])

HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 2   ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ 61
           +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+RT ++T   N E+ Q
Sbjct: 189 SDRGAAVPRFGEWDENDPQSADNYTHIFNKVREEKQGNP-SGTPSRTSNNTQKHNSEEKQ 248

Query: 62  K 63
           +
Sbjct: 249 R 248

[Close]

BLAST of CSPI03G27610 vs. NCBI nr
Match: XP_015086554.1 (RPM1-interacting protein 4 isoform X2 [Solanum pennellii])

HSP 1 Score: 65.9 bits (159), Expect = 2.5e-07
Identity = 32/61 (52.46%), Postives = 44/61 (72.13%), Query Frame = 0


Query: 2   ADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQNQ 61
           +D  AAVP+FGEWD+ D ++ +NYT IFNKVREE+Q     GTP+RT ++T   N E+ Q
Sbjct: 188 SDRGAAVPRFGEWDENDPQSADNYTHIFNKVREEKQGNP-SGTPSRTSNNTQKHNSEEKQ 247

Query: 62  K 63
           +
Sbjct: 248 R 247

[Close]

BLAST of CSPI03G27610 vs. TAIR 10
Match: AT5G55850.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 45.1 bits (105), Expect = 4.2e-05
Identity = 20/48 (41.67%), Postives = 30/48 (62.50%), Query Frame = 0


Query: 1  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT 49
          M+D    +PKFGEWD  D  + E +T IFNK R+E++     G+P ++
Sbjct: 1  MSDKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKS 48

[Close]

BLAST of CSPI03G27610 vs. TAIR 10
Match: AT3G25070.1 (RPM1 interacting protein 4 )

HSP 1 Score: 44.7 bits (104), Expect = 5.5e-05
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 8   VPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQN 57
           VPKFG+WD+ +  + + YT IFNKVREER         +RT    +S+N
Sbjct: 148 VPKFGDWDENNPSSADGYTHIFNKVREERSSGANVSGSSRTPTHQSSRN 196

[Close]

BLAST of CSPI03G27610 vs. TAIR 10
Match: AT5G55850.2 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.7e-04
Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 3  DNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT 49
          D    +PKFGEWD  D  + E +T IFNK R+E++     G+P ++
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKS 64

[Close]

BLAST of CSPI03G27610 vs. TAIR 10
Match: AT5G55850.3 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.7e-04
Identity = 19/46 (41.30%), Postives = 28/46 (60.87%), Query Frame = 0


Query: 3  DNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRT 49
          D    +PKFGEWD  D  + E +T IFNK R+E++     G+P ++
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIFNKARDEKKTGGKPGSPGKS 64

[Close]

BLAST of CSPI03G27610 vs. TAIR 10
Match: AT2G04410.1 (RPM1-interacting protein 4 (RIN4) family protein )

HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04
Identity = 25/66 (37.88%), Postives = 35/66 (53.03%), Query Frame = 0


Query: 1  MADNEAAVPKFGEWDDRDAKAPENYTAIFNKVREERQDQTVRGTPTRTIDSTNSQNHEQN 60
          MAD    +PKFGEWD  D  + E +T IFNK R E++      +P +     N +N E  
Sbjct: 1  MADKGRPLPKFGEWDVNDPSSAEGFTVIFNKARNEKKGGGKSDSPGKDEPGYN-KNGEVL 60

Query: 61 QKLGQK 67
          +K  +K
Sbjct: 61 EKPAKK 65

The following BLAST results are available for this feature:

BLAST of CSPI03G27610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22633	5.9e-04	41.67	Protein NOI4 OS=Arabidopsis thaliana OX=3702 GN=NOI4 PE=1 SV=1	[more]
Q8GYN5	7.7e-04	44.90	RPM1-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=RIN4 PE=1 SV=1	[more]

BLAST of CSPI03G27610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L950	6.1e-52	97.14	AvrRpt-cleavage domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G63...	[more]
A0A6N2AQE8	1.2e-07	52.46	AvrRpt-cleavage domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_0...	[more]
A0A3Q7IYL7	4.5e-07	50.82	AvrRpt-cleavage domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101...	[more]
M1CPC9	7.8e-07	51.67	RIN4c protein OS=Solanum tuberosum OX=4113 GN=102596147 PE=4 SV=1	[more]
M1CPD2	7.8e-07	51.67	RIN4c protein OS=Solanum tuberosum OX=4113 GN=102596147 PE=4 SV=1	[more]

BLAST of CSPI03G27610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038888923.1	5.0e-16	69.86	RPM1-interacting protein 4-like [Benincasa hispida]	[more]
KAG7036250.1	1.3e-11	67.69	hypothetical protein SDJN02_03052 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6606311.1	1.7e-11	68.75	RPM1-interacting protein 4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_015086553.1	2.5e-07	52.46	RPM1-interacting protein 4 isoform X1 [Solanum pennellii]	[more]
XP_015086554.1	2.5e-07	52.46	RPM1-interacting protein 4 isoform X2 [Solanum pennellii]	[more]

BLAST of CSPI03G27610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55850.1	4.2e-05	41.67	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT3G25070.1	5.5e-05	44.90	RPM1 interacting protein 4	[more]
AT5G55850.2	2.7e-04	41.30	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT5G55850.3	2.7e-04	41.30	RPM1-interacting protein 4 (RIN4) family protein	[more]
AT2G04410.1	3.6e-04	37.88	RPM1-interacting protein 4 (RIN4) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008700	RIN4, pathogenic type III effector avirulence factor Avr cleavage site	PFAM	PF05627	AvrRpt-cleavage	coord: 3..37 e-value: 9.8E-16 score: 56.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..62
None	No IPR available	PANTHER	PTHR33159:SF26	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 3..69
IPR040387	RPM1-interacting protein 4/NOI4	PANTHER	PTHR33159	RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN	coord: 3..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G27610.1	CSPI03G27610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane