
CSPI03G26960 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATTTATTTGCACTATTTTTTTCAGATAAAGGGTCTTCTAAATGGATCAAAGTTCATGAAAGGAGAACGCTTCACGACGTTCTAAAGGAGCCGAACTACATTATACCAGGAATACCAGGTGTGATGTTACCCCATTCAATTTCCAACATCATAACTACTTTTTGCATCTTAATTAACGAAAATGACTTTATATTTTCTATATTTGTCTCTTTTGGATGCAGTCTTTTATGTTGTTTCAAGAAACTCAAAATTTTATAAAGATTTCAAAGCTGGGAGATGGGTTCCTCCCTCATAAGTTTATTGGATCAAGCAGAGCATATGCTGTACCATTGTAAGTTCCATAGCAACTTTTTGCTTAGGTCAATGCTGGTTCTCTCAATCTTCTGTTATTTTTCAAATTTTGTTTTCATGATTGACTTAGGGTAGGTTAGGTTATAGTACTTGTTCTTGTGCAATCTAAAGCATTTTACCATTATTATCATATTTATTTATTTTTTCCAAGATTCTCTTTTTTTCTTAGTTGATTGAAAAGTCATTTTGATTGAAATATTTGGTCGGAAGCTAACCTAAACGTAGGTCTTTAGACAAATGCGTATGGGCGGATCAAATCCTCCCACTTCACCGGTCTTAATGAC GATTTATTTGCACTATTTTTTTCAGATAAAGGGTCTTCTAAATGGATCAAAGTTCATGAAAGGAGAACGCTTCACGACGTTCTAAAGGAGCCGAACTACATTATACCAGGAATACCAGTCTTTTATGTTGTTTCAAGAAACTCAAAATTTTATAAAGATTTCAAAGCTGGGAGATGGGTTCCTCCCTCATAAGTTTATTGGATCAAGCAGAGCATATGCTGTACCATTGTAAGTTCCATAGCAACTTTTTGCTTAGGTCAATGCTGGTTCTCTCAATCTTCTGTTATTTTTCAAATTTTGTTTTCATGATTGACTTAGGGTAGGTTAGGTTATAGTACTTGTTCTTGTGCAATCTAAAGCATTTTACCATTATTATCATATTTATTTATTTTTTCCAAGATTCTCTTTTTTTCTTAGTTGATTGAAAAGTCATTTTGATTGAAATATTTGGTCGGAAGCTAACCTAAACGTAGGTCTTTAGACAAATGCGTATGGGCGGATCAAATCCTCCCACTTCACCGGTCTTAATGAC GATTTATTTGCACTATTTTTTTCAGATAAAGGGTCTTCTAAATGGATCAAAGTTCATGAAAGGAGAACGCTTCACGACGTTCTAAAGGAGCCGAACTACATTATACCAGGAATACCAGTCTTTTATGTTGTTTCAAGAAACTCAAAATTTTATAAAGATTTCAAAGCTGGGAGATGGGTTCCTCCCTCATAA DLFALFFSDKGSSKWIKVHERRTLHDVLKEPNYIIPGIPVFYVVSRNSKFYKDFKAGRWVPPS* Homology
BLAST of CSPI03G26960 vs. ExPASy Swiss-Prot
Match: Q54M20 (Tetratricopeptide repeat protein 4 homolog OS=Dictyostelium discoideum OX=44689 GN=ttc4 PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 2.2e-06 Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 0
BLAST of CSPI03G26960 vs. ExPASy TrEMBL
Match: A0A0A0LC81 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G611370 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 3.0e-30 Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0
BLAST of CSPI03G26960 vs. ExPASy TrEMBL
Match: A0A1S3BHV4 (tetratricopeptide repeat protein 4 homolog OS=Cucumis melo OX=3656 GN=LOC103489830 PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 3.2e-24 Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CSPI03G26960 vs. ExPASy TrEMBL
Match: A0A6J1DZY6 (tetratricopeptide repeat protein 4 homolog isoform X1 OS=Momordica charantia OX=3673 GN=LOC111026147 PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 6.3e-20 Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of CSPI03G26960 vs. ExPASy TrEMBL
Match: A0A6J1E576 (tetratricopeptide repeat protein 4 homolog isoform X2 OS=Momordica charantia OX=3673 GN=LOC111026147 PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 6.3e-20 Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of CSPI03G26960 vs. ExPASy TrEMBL
Match: A0A5N5FGL6 (Tetratricopeptide repeat protein 4-like protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_003028 PE=3 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 6.3e-20 Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of CSPI03G26960 vs. NCBI nr
Match: XP_011651622.1 (tetratricopeptide repeat protein 4 homolog [Cucumis sativus] >KGN58403.2 hypothetical protein Csa_017563 [Cucumis sativus]) HSP 1 Score: 123.2 bits (308), Expect = 7.9e-25 Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CSPI03G26960 vs. NCBI nr
Match: XP_008447360.1 (PREDICTED: tetratricopeptide repeat protein 4 homolog [Cucumis melo]) HSP 1 Score: 120.2 bits (300), Expect = 6.7e-24 Identity = 52/56 (92.86%), Postives = 56/56 (100.00%), Query Frame = 0
BLAST of CSPI03G26960 vs. NCBI nr
Match: XP_022159856.1 (tetratricopeptide repeat protein 4 homolog isoform X2 [Momordica charantia]) HSP 1 Score: 105.9 bits (263), Expect = 1.3e-19 Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of CSPI03G26960 vs. NCBI nr
Match: KAB2602023.1 (tetratricopeptide repeat protein 4-like protein [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 105.9 bits (263), Expect = 1.3e-19 Identity = 43/54 (79.63%), Postives = 50/54 (92.59%), Query Frame = 0
BLAST of CSPI03G26960 vs. NCBI nr
Match: XP_022159855.1 (tetratricopeptide repeat protein 4 homolog isoform X1 [Momordica charantia]) HSP 1 Score: 105.9 bits (263), Expect = 1.3e-19 Identity = 46/56 (82.14%), Postives = 52/56 (92.86%), Query Frame = 0
BLAST of CSPI03G26960 vs. TAIR 10
Match: AT1G04130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein ) HSP 1 Score: 94.7 bits (234), Expect = 2.8e-20 Identity = 39/54 (72.22%), Postives = 47/54 (87.04%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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