CSPI03G26690 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G26690
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ty3/gypsy retrotransposon protein
Location	Chr3: 24143176 .. 24144970 (-)
RNA-Seq Expression	CSPI03G26690
Synteny	CSPI03G26690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAGACCGTGCCCGACCAGTCTACGAAAGAGAGTTGATGGCGGTCGTGCTGGCAGTGCAACGTTGGAGGCCATACCTTTTAGGCCGAACGTTCATTGTTAAAACTGATCAACAATCTCTCAAGTTCTTATTAGAGCAGAGAGTGATCCAGCCACAGTACCAAAGATGGATTGCCAAGTTTCTCGGCTATTCATTTGAGGTAGTGTATAAACCCGTCTAGAAAAAAAGGCAGCCGATGCTTTATCTCGAGTAACACCTGTGGCACAACTTTACAACTTAACGGCTCCTACGTTGGTTGATCTAACAATCGTAATGGAAGAAGTGAAGGAGGATGAATTTTTGATGGAAATCATCAACTGACTGCAGAAAGGTGAAGAAGTGAAGAATTATACGTGGCAACAAGGACTGCTAAAGTACAAGGGAAGAATAGTAATTGCAAAGAAGTCTGCGCTGATTCCTACTATTTTGCACACATACCATGACTCCGTATTGGGAGGACATTTCGGGTTCTTAAGGACGTATAAGAGGCTAACCAGAGAGCTGTTTTGGGTAGGCATAAAGGCAGAAATACAGAAGTATTGTGAAGAATGTGCCACGTGTCAGCGAAATAAAACCTTGGCCCTCTCACCGACAAGTTTACTAACTCCGTTGGAGATACCAAGTAGGGTATGGGAAGACATATCTATGGACTTCATCGAAGGACTGCCCAAGTCCAGTGGACATGAGGTAATTCTGGTGGTGGTTGATCGTTTCGGCAAGTATGCTCACTTCCTGGGCCTTAAACATCCGTTTGATGCCAAGACAGTAGCGGAGGTATTTATGAAAGAAGTTGTAAGGTTGCACGACTTTCCACAGTCAATAGTTTCTGACCGTGATAAGATCTTCATGAGCAATTTTTGGAAGGAGCACTTTCGTCTGGCAAGCACAAAATTGAACCGAAGTACCGTATATCATCCTCAAACAAATGGTCAGACTGAGGTGGTTAACAGTTCAGTGGAGATTTACTTAAGATGCTTTTGTGGAGAAAGACCAAAGCAATGGATGAAGTGGATTCCTTGGGCTGAATATTGGTATAATACCACATATCAGCGTTCTTTAGGAGTATCTCCCTTTCAAGCAGTATATGGACGTGCTCCACCAGCCTTGTTATATTATGGCGATCGTGGGACCTCCATTTCCACATTGGATGAGCAGCTTAAAGAAAGAGATATAGTGTTGGGAGTGTTAAAAAACATTTGCGTATAGCACAGAACAAGATGAAGAGCTACGCTGACATGAAAAGAAGACACGTGGAATTCGAAAAAGGGGACATGGTGTTCTTGAAAATCCGTCCTTACAGACAAGTCACCATGCGTTAGAGGAGGAACGAAAAGCTATCCCCTAAATATTTTGGACCCTATCAAATATTGGAGAAAATTGGACCAGTGGCATATAGGCTGGAGTTACCTGCGGCAGCAACAATTCATCCGGTCTTCCACATTTCACAGTTGAAGAAAGCTTTCGAGGAAAGCGCTAACAAAGAAGAATTGGTATCCTTTTTGATTGAAAATCAGGAGTGGCTAGCAATACCAGACGAAGTCTTTGGGTATCAAATGAATGCGAAAGGAGATTGGGACGTTCTAATGAGCTGGAAGGGACTGCCAAGGCATGAAGCAACGTGGGAGAACTATGACGATTTTCAACAATCGTTCCCTGATTTCCACCTTGAGGACAAGGTGAAATTGGACCGGGAATGCAATGTTAGACCTCCTACAATACACCAATATAGCAGAAGGAAGGATCTGAAGGAATAG

mRNA sequence

ATGAGAGACCGTGCCCGACCAGTCTACGAAAGAGAGTTGATGGCGGTCGTGCTGGCAGTGCAACGTTGGAGGCCATACCTTTTAGGCCGAACGTTCATTGTTAAAACTGATCAACAATCTCTCAAGTTCTTATTAGAGCAGAGAGTGATCCAGCCACAGTACCAAAGATGGATTGCCAAGTTTCTCGGCTATTCATTTGAGAAAGGTGAAGAAGTGAAGAATTATACGTGGCAACAAGGACTGCTAAAGTACAAGGGAAGAATAGTAATTGCAAAGAAGTCTGCGCTGATTCCTACTATTTTGCACACATACCATGACTCCGTATTGGGAGGACATTTCGGGTTCTTAAGGACGTATAAGAGGCTAACCAGAGAGCTGTTTTGGGTAGGCATAAAGGCAGAAATACAGAAGTATTGTGAAGAATGTGCCACGTGTCAGCGAAATAAAACCTTGGCCCTCTCACCGACAAGTTTACTAACTCCGTTGGAGATACCAAGTAGGGTATGGGAAGACATATCTATGGACTTCATCGAAGGACTGCCCAAGTCCAGTGGACATGAGGTAATTCTGGTGGTGGTTGATCGTTTCGGCAAGTATGCTCACTTCCTGGGCCTTAAACATCCGTTTGATGCCAAGACAGTAGCGGAGGTATTTATGAAAGAAGTTGTAAGGTTGCACGACTTTCCACAGTCAATAGTTTCTGACCGTGATAAGATCTTCATGAGCAATTTTTGGAAGGAGCACTTTCGTCTGGCAAGCACAAAATTGAACCGAAGTACCGTATATCATCCTCAAACAAATGGTCAGACTGAGGTGGTTAACAGTTCAGTGGAGATTTACTTAAGATGCTTTTGTGGAGAAAGACCAAAGCAATGGATGAAGTGGATTCCTTGGGCTGAATATTGGTATAATACCACATATCAGCGTTCTTTAGGAGTATCTCCCTTTCAAGCAGTATATGGACGTGCTCCACCAGCCTTGTTATATTATGGCGATCGTGGGACCTCCATTTCCACATTGGATGAGCAGCTTAAAGAAAGAGATATAGTGTTGGGAGTGTTAAAAAACATTTGCAGGAGGAACGAAAAGCTATCCCCTAAATATTTTGGACCCTATCAAATATTGGAGAAAATTGGACCAGTGGCATATAGGCTGGAGTTACCTGCGGCAGCAACAATTCATCCGGTCTTCCACATTTCACAGTTGAAGAAAGCTTTCGAGGAAAGCGCTAACAAAGAAGAATTGGTATCCTTTTTGATTGAAAATCAGGAGTGGCTAGCAATACCAGACGAAGTCTTTGGGTATCAAATGAATGCGAAAGGAGATTGGGACGTTCTAATGAGCTGGAAGGGACTGCCAAGGCATGAAGCAACGTGGGAGAACTATGACGATTTTCAACAATCGTTCCCTGATTTCCACCTTGAGGACAAGGTGAAATTGGACCGGGAATGCAATGTTAGACCTCCTACAATACACCAATATAGCAGAAGGAAGGATCTGAAGGAATAG

Coding sequence (CDS)

ATGAGAGACCGTGCCCGACCAGTCTACGAAAGAGAGTTGATGGCGGTCGTGCTGGCAGTGCAACGTTGGAGGCCATACCTTTTAGGCCGAACGTTCATTGTTAAAACTGATCAACAATCTCTCAAGTTCTTATTAGAGCAGAGAGTGATCCAGCCACAGTACCAAAGATGGATTGCCAAGTTTCTCGGCTATTCATTTGAGAAAGGTGAAGAAGTGAAGAATTATACGTGGCAACAAGGACTGCTAAAGTACAAGGGAAGAATAGTAATTGCAAAGAAGTCTGCGCTGATTCCTACTATTTTGCACACATACCATGACTCCGTATTGGGAGGACATTTCGGGTTCTTAAGGACGTATAAGAGGCTAACCAGAGAGCTGTTTTGGGTAGGCATAAAGGCAGAAATACAGAAGTATTGTGAAGAATGTGCCACGTGTCAGCGAAATAAAACCTTGGCCCTCTCACCGACAAGTTTACTAACTCCGTTGGAGATACCAAGTAGGGTATGGGAAGACATATCTATGGACTTCATCGAAGGACTGCCCAAGTCCAGTGGACATGAGGTAATTCTGGTGGTGGTTGATCGTTTCGGCAAGTATGCTCACTTCCTGGGCCTTAAACATCCGTTTGATGCCAAGACAGTAGCGGAGGTATTTATGAAAGAAGTTGTAAGGTTGCACGACTTTCCACAGTCAATAGTTTCTGACCGTGATAAGATCTTCATGAGCAATTTTTGGAAGGAGCACTTTCGTCTGGCAAGCACAAAATTGAACCGAAGTACCGTATATCATCCTCAAACAAATGGTCAGACTGAGGTGGTTAACAGTTCAGTGGAGATTTACTTAAGATGCTTTTGTGGAGAAAGACCAAAGCAATGGATGAAGTGGATTCCTTGGGCTGAATATTGGTATAATACCACATATCAGCGTTCTTTAGGAGTATCTCCCTTTCAAGCAGTATATGGACGTGCTCCACCAGCCTTGTTATATTATGGCGATCGTGGGACCTCCATTTCCACATTGGATGAGCAGCTTAAAGAAAGAGATATAGTGTTGGGAGTGTTAAAAAACATTTGCAGGAGGAACGAAAAGCTATCCCCTAAATATTTTGGACCCTATCAAATATTGGAGAAAATTGGACCAGTGGCATATAGGCTGGAGTTACCTGCGGCAGCAACAATTCATCCGGTCTTCCACATTTCACAGTTGAAGAAAGCTTTCGAGGAAAGCGCTAACAAAGAAGAATTGGTATCCTTTTTGATTGAAAATCAGGAGTGGCTAGCAATACCAGACGAAGTCTTTGGGTATCAAATGAATGCGAAAGGAGATTGGGACGTTCTAATGAGCTGGAAGGGACTGCCAAGGCATGAAGCAACGTGGGAGAACTATGACGATTTTCAACAATCGTTCCCTGATTTCCACCTTGAGGACAAGGTGAAATTGGACCGGGAATGCAATGTTAGACCTCCTACAATACACCAATATAGCAGAAGGAAGGATCTGAAGGAATAG

Protein sequence

MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAKFLGYSFEKGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTRELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSSGHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNFWKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYNTTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNICRRNEKLSPKYFGPYQILEKIGPVAYRLELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMNAKGDWDVLMSWKGLPRHEATWENYDDFQQSFPDFHLEDKVKLDRECNVRPPTIHQYSRRKDLKE*

Homology

[Close]

BLAST of CSPI03G26690 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.6e-45
Identity = 112/361 (31.02%), Postives = 168/361 (46.54%), Query Frame = 0


Query: 81   LLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTRELFWVGIKAEIQKYCE 140
            L+  K +I++   + L  TI+  YH+     H G       + R   W GI+ +IQ+Y +
Sbjct: 896  LINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQ 955

Query: 141  ECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSSGHEVILVVVDRFGKYA 200
             C TCQ NK+    P   L P+    R WE +SMDFI  LP+SSG+  + VVVDRF K A
Sbjct: 956  NCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMA 1015

Query: 201  HFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNFWKEHFRLASTKLNRST 260
              +       A+  A +F + V+     P+ I++D D IF S  WK+     +  +  S 
Sbjct: 1016 ILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSL 1075

Query: 261  VYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYNTTYQRSLGVSPFQAVY 320
             Y PQT+GQTE  N +VE  LRC C   P  W+  I   +  YN     +  ++PF+ V+
Sbjct: 1076 PYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

Query: 321  GRAP-------PALLYYGDRGTS-----ISTLDEQLKERDIVL----------------G 380
              +P       P+     D  +        T+ E L   +I +                G
Sbjct: 1136 RYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195

Query: 381  VLKNICR-------RNEKLSPKYFGPYQILEKIGPVAYRLELPAAA--TIHPVFHISQLK 405
             L  + R       ++ KL+P + GP+ +L+K GP  Y L+LP +        FH+S L+
Sbjct: 1196 DLVMVKRTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of CSPI03G26690 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.6e-45
Identity = 112/361 (31.02%), Postives = 168/361 (46.54%), Query Frame = 0


Query: 81   LLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTRELFWVGIKAEIQKYCE 140
            L+  K +I++   + L  TI+  YH+     H G       + R   W GI+ +IQ+Y +
Sbjct: 896  LINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQ 955

Query: 141  ECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSSGHEVILVVVDRFGKYA 200
             C TCQ NK+    P   L P+    R WE +SMDFI  LP+SSG+  + VVVDRF K A
Sbjct: 956  NCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMA 1015

Query: 201  HFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNFWKEHFRLASTKLNRST 260
              +       A+  A +F + V+     P+ I++D D IF S  WK+     +  +  S 
Sbjct: 1016 ILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSL 1075

Query: 261  VYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYNTTYQRSLGVSPFQAVY 320
             Y PQT+GQTE  N +VE  LRC C   P  W+  I   +  YN     +  ++PF+ V+
Sbjct: 1076 PYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

Query: 321  GRAP-------PALLYYGDRGTS-----ISTLDEQLKERDIVL----------------G 380
              +P       P+     D  +        T+ E L   +I +                G
Sbjct: 1136 RYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195

Query: 381  VLKNICR-------RNEKLSPKYFGPYQILEKIGPVAYRLELPAAA--TIHPVFHISQLK 405
             L  + R       ++ KL+P + GP+ +L+K GP  Y L+LP +        FH+S L+
Sbjct: 1196 DLVMVKRTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of CSPI03G26690 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.6e-45
Identity = 112/361 (31.02%), Postives = 168/361 (46.54%), Query Frame = 0


Query: 81   LLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTRELFWVGIKAEIQKYCE 140
            L+  K +I++   + L  TI+  YH+     H G       + R   W GI+ +IQ+Y +
Sbjct: 896  LINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQ 955

Query: 141  ECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSSGHEVILVVVDRFGKYA 200
             C TCQ NK+    P   L P+    R WE +SMDFI  LP+SSG+  + VVVDRF K A
Sbjct: 956  NCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMA 1015

Query: 201  HFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNFWKEHFRLASTKLNRST 260
              +       A+  A +F + V+     P+ I++D D IF S  WK+     +  +  S 
Sbjct: 1016 ILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSL 1075

Query: 261  VYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYNTTYQRSLGVSPFQAVY 320
             Y PQT+GQTE  N +VE  LRC C   P  W+  I   +  YN     +  ++PF+ V+
Sbjct: 1076 PYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

Query: 321  GRAP-------PALLYYGDRGTS-----ISTLDEQLKERDIVL----------------G 380
              +P       P+     D  +        T+ E L   +I +                G
Sbjct: 1136 RYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195

Query: 381  VLKNICR-------RNEKLSPKYFGPYQILEKIGPVAYRLELPAAA--TIHPVFHISQLK 405
             L  + R       ++ KL+P + GP+ +L+K GP  Y L+LP +        FH+S L+
Sbjct: 1196 DLVMVKRTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of CSPI03G26690 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.6e-45
Identity = 112/361 (31.02%), Postives = 168/361 (46.54%), Query Frame = 0


Query: 81   LLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTRELFWVGIKAEIQKYCE 140
            L+  K +I++   + L  TI+  YH+     H G       + R   W GI+ +IQ+Y +
Sbjct: 896  LINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQ 955

Query: 141  ECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSSGHEVILVVVDRFGKYA 200
             C TCQ NK+    P   L P+    R WE +SMDFI  LP+SSG+  + VVVDRF K A
Sbjct: 956  NCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMA 1015

Query: 201  HFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNFWKEHFRLASTKLNRST 260
              +       A+  A +F + V+     P+ I++D D IF S  WK+     +  +  S 
Sbjct: 1016 ILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSL 1075

Query: 261  VYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYNTTYQRSLGVSPFQAVY 320
             Y PQT+GQTE  N +VE  LRC C   P  W+  I   +  YN     +  ++PF+ V+
Sbjct: 1076 PYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

Query: 321  GRAP-------PALLYYGDRGTS-----ISTLDEQLKERDIVL----------------G 380
              +P       P+     D  +        T+ E L   +I +                G
Sbjct: 1136 RYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195

Query: 381  VLKNICR-------RNEKLSPKYFGPYQILEKIGPVAYRLELPAAA--TIHPVFHISQLK 405
             L  + R       ++ KL+P + GP+ +L+K GP  Y L+LP +        FH+S L+
Sbjct: 1196 DLVMVKRTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of CSPI03G26690 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 8.6e-45
Identity = 112/361 (31.02%), Postives = 168/361 (46.54%), Query Frame = 0


Query: 81   LLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTRELFWVGIKAEIQKYCE 140
            L+  K +I++   + L  TI+  YH+     H G       + R   W GI+ +IQ+Y +
Sbjct: 896  LINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQ 955

Query: 141  ECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSSGHEVILVVVDRFGKYA 200
             C TCQ NK+    P   L P+    R WE +SMDFI  LP+SSG+  + VVVDRF K A
Sbjct: 956  NCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVVVDRFSKMA 1015

Query: 201  HFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNFWKEHFRLASTKLNRST 260
              +       A+  A +F + V+     P+ I++D D IF S  WK+     +  +  S 
Sbjct: 1016 ILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSL 1075

Query: 261  VYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYNTTYQRSLGVSPFQAVY 320
             Y PQT+GQTE  N +VE  LRC C   P  W+  I   +  YN     +  ++PF+ V+
Sbjct: 1076 PYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH 1135

Query: 321  GRAP-------PALLYYGDRGTS-----ISTLDEQLKERDIVL----------------G 380
              +P       P+     D  +        T+ E L   +I +                G
Sbjct: 1136 RYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPG 1195

Query: 381  VLKNICR-------RNEKLSPKYFGPYQILEKIGPVAYRLELPAAA--TIHPVFHISQLK 405
             L  + R       ++ KL+P + GP+ +L+K GP  Y L+LP +        FH+S L+
Sbjct: 1196 DLVMVKRTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of CSPI03G26690 vs. ExPASy TrEMBL
Match: A0A5A7VG68 (Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold446G00220 PE=4 SV=1)

HSP 1 Score: 774.2 bits (1998), Expect = 3.2e-220
Identity = 382/594 (64.31%), Postives = 429/594 (72.22%), Query Frame = 0


Query: 1   MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
           +RDRA+PVYERELMAVVLAVQRWRPYLLGR F+VK DQ+SLKFLLEQRVIQPQY +WIAK
Sbjct: 241 LRDRAKPVYERELMAVVLAVQRWRPYLLGRRFVVKIDQRSLKFLLEQRVIQPQYLKWIAK 300

Query: 61  FLGYSFE----------------------------------------------------- 120
            LGYSFE                                                     
Sbjct: 301 LLGYSFEVLYKPGLENKAADALSRVPSVVQLNQLTVPALIDLKLIREEVAQDDYLKQIIK 360

Query: 121 ---KGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              + EEV  YT Q G+L+YKGRIVIAK S LIPTILHTYHDSV  GH GFLRTYKRLT 
Sbjct: 361 RITEREEVPKYTMQHGMLQYKGRIVIAKSSTLIPTILHTYHDSVFEGHSGFLRTYKRLTG 420

Query: 181 ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
           ELFW G+K ++QKYCEEC  CQRNK+L+LSP  LLTPLEIPSR+W+ ISMDFIEGLPK++
Sbjct: 421 ELFWQGMKGDVQKYCEECTVCQRNKSLSLSPAGLLTPLEIPSRIWDYISMDFIEGLPKAA 480

Query: 241 GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
           G +VILVVVDRF KYAHFL LKHPFDA+ VAEVF+KEVVRLH FP+SIVSDRDK+F+S+F
Sbjct: 481 GFDVILVVVDRFSKYAHFLALKHPFDAQIVAEVFVKEVVRLHGFPKSIVSDRDKVFLSHF 540

Query: 301 WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
           WKE FRLA TKLNRST YHPQT+GQTEVV+ SVE YLRCFCGERPK+W+KWI WAEYWYN
Sbjct: 541 WKELFRLAGTKLNRSTTYHPQTDGQTEVVSRSVEAYLRCFCGERPKEWIKWIHWAEYWYN 600

Query: 361 TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TYQ+SLGVSPFQAVYGR P  L+ YGD  T+ STLDEQLK+RDI LG LK         
Sbjct: 601 RTYQQSLGVSPFQAVYGRTPSPLVSYGDHSTTNSTLDEQLKQRDIALGALKEHLRVAQDK 660

Query: 421 ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                             RRNEKLSPKYFGPY++L+KIG VAYR
Sbjct: 661 MKTYADLKRRHVEFEEGDMVYLKLRPYRQVSMRKRRNEKLSPKYFGPYKVLKKIGTVAYR 720

Query: 481 LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMNAKGDWD 499
           LELP  ATIHPVFHISQLK+AF +  N + L  ++ E  EWLA+PDE FGYQ NAKG+W+
Sbjct: 721 LELPPTATIHPVFHISQLKRAFGDCQNPQNLAPYMTETHEWLAVPDEAFGYQKNAKGEWE 780

[Close]

BLAST of CSPI03G26690 vs. ExPASy TrEMBL
Match: A0A5D3DMY9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00980 PE=4 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 2.0e-198
Identity = 345/598 (57.69%), Postives = 408/598 (68.23%), Query Frame = 0


Query: 1    MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
            MRDRARPVYEREL+AVVLAVQRWRPYLLGR F VKTDQ+SLKFLLEQRV+QPQYQ+W+AK
Sbjct: 1032 MRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAK 1091

Query: 61   FLGYSF------------------------------------------------------ 120
             LGYSF                                                      
Sbjct: 1092 LLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPALQEITR 1151

Query: 121  --EKGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              E+G E+ +YT QQG+LK+KGR+VI  KS LIPTILHTYHDSV GGH GFLRTYKRLT 
Sbjct: 1152 ILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTG 1211

Query: 181  ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
            E++W G+K +I +YCEECA CQRNK+ ALSP  LL PLEIP  +W DISMDFIEGLPKS 
Sbjct: 1212 EIYWKGMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSK 1271

Query: 241  GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
            G +VI VVVDR  KY HFL LKHPF AK VAE F+KEVVRLH +P+SIVSDRDK+F+S+F
Sbjct: 1272 GWDVIFVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHF 1331

Query: 301  WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
            WKE FRLA TKLNRS+ YHPQ++GQTEVVN S+E YLRCFCGE+P +W +W+ WAEYWYN
Sbjct: 1332 WKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYN 1391

Query: 361  TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TTY  S+G++PFQAVYGR PP L+YYGD  T  STLD+QLK+RDI LG LK         
Sbjct: 1392 TTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQER 1451

Query: 421  ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                              +RNEKLSPK+FGPY++LE+IG VAY+
Sbjct: 1452 MKKHADHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYK 1511

Query: 481  LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMN-AKGDW 502
            LELPAAA IHPVFH+SQLKKA  +    + L  ++  N EW+  P+EV+ Y+ N A  +W
Sbjct: 1512 LELPAAAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEW 1571

[Close]

BLAST of CSPI03G26690 vs. ExPASy TrEMBL
Match: A0A5A7T725 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold92G003050 PE=4 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 2.0e-198
Identity = 345/598 (57.69%), Postives = 408/598 (68.23%), Query Frame = 0


Query: 1    MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
            MRDRARPVYEREL+AVVLAVQRWRPYLLGR F VKTDQ+SLKFLLEQRV+QPQYQ+W+AK
Sbjct: 1475 MRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAK 1534

Query: 61   FLGYSF------------------------------------------------------ 120
             LGYSF                                                      
Sbjct: 1535 LLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPALQEITR 1594

Query: 121  --EKGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              E+G E+ +YT QQG+LK+KGR+VI  KS LIPTILHTYHDSV GGH GFLRTYKRLT 
Sbjct: 1595 ILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTG 1654

Query: 181  ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
            E++W G+K +I +YCEECA CQRNK+ ALSP  LL PLEIP  +W DISMDFIEGLPKS 
Sbjct: 1655 EIYWKGMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSK 1714

Query: 241  GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
            G +VI VVVDR  KY HFL LKHPF AK VAE F+KEVVRLH +P+SIVSDRDK+F+S+F
Sbjct: 1715 GWDVIFVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHF 1774

Query: 301  WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
            WKE FRLA TKLNRS+ YHPQ++GQTEVVN S+E YLRCFCGE+P +W +W+ WAEYWYN
Sbjct: 1775 WKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYN 1834

Query: 361  TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TTY  S+G++PFQAVYGR PP L+YYGD  T  STLD+QLK+RDI LG LK         
Sbjct: 1835 TTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQER 1894

Query: 421  ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                              +RNEKLSPK+FGPY++LE+IG VAY+
Sbjct: 1895 MKKHADHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYK 1954

Query: 481  LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMN-AKGDW 502
            LELPAAA IHPVFH+SQLKKA  +    + L  ++  N EW+  P+EV+ Y+ N A  +W
Sbjct: 1955 LELPAAAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEW 2014

[Close]

BLAST of CSPI03G26690 vs. ExPASy TrEMBL
Match: A0A5D3C9P5 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00120 PE=4 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 2.0e-198
Identity = 345/598 (57.69%), Postives = 408/598 (68.23%), Query Frame = 0


Query: 1    MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
            MRDRARPVYEREL+AVVLAVQRWRPYLLGR F VKTDQ+SLKFLLEQRV+QPQYQ+W+AK
Sbjct: 1554 MRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAK 1613

Query: 61   FLGYSF------------------------------------------------------ 120
             LGYSF                                                      
Sbjct: 1614 LLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPALQEITR 1673

Query: 121  --EKGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              E+G E+ +YT QQG+LK+KGR+VI  KS LIPTILHTYHDSV GGH GFLRTYKRLT 
Sbjct: 1674 ILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTG 1733

Query: 181  ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
            E++W G+K +I +YCEECA CQRNK+ ALSP  LL PLEIP  +W DISMDFIEGLPKS 
Sbjct: 1734 EIYWKGMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSK 1793

Query: 241  GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
            G +VI VVVDR  KY HFL LKHPF AK VAE F+KEVVRLH +P+SIVSDRDK+F+S+F
Sbjct: 1794 GWDVIFVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHF 1853

Query: 301  WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
            WKE FRLA TKLNRS+ YHPQ++GQTEVVN S+E YLRCFCGE+P +W +W+ WAEYWYN
Sbjct: 1854 WKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYN 1913

Query: 361  TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TTY  S+G++PFQAVYGR PP L+YYGD  T  STLD+QLK+RDI LG LK         
Sbjct: 1914 TTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQER 1973

Query: 421  ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                              +RNEKLSPK+FGPY++LE+IG VAY+
Sbjct: 1974 MKKHADHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYK 2033

Query: 481  LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMN-AKGDW 502
            LELPAAA IHPVFH+SQLKKA  +    + L  ++  N EW+  P+EV+ Y+ N A  +W
Sbjct: 2034 LELPAAAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEW 2093

[Close]

BLAST of CSPI03G26690 vs. ExPASy TrEMBL
Match: A0A5A7T0J9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G001820 PE=4 SV=1)

HSP 1 Score: 701.8 bits (1810), Expect = 2.0e-198
Identity = 346/598 (57.86%), Postives = 408/598 (68.23%), Query Frame = 0


Query: 1    MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
            MRDRARPVYEREL+AVVLAVQRWRPYLLGR F VKTDQ+SLKFLLEQRV+QPQYQ+W+AK
Sbjct: 1294 MRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAK 1353

Query: 61   FLGYSF------------------------------------------------------ 120
             LGYSF                                                      
Sbjct: 1354 LLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPALQEITR 1413

Query: 121  --EKGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              E+G E+ +YT QQG+LK+KGR+VI  KS LIPTILHTYHDSV GGH GFLRTYKRLT 
Sbjct: 1414 ILEEGMEIPHYTLQQGVLKFKGRLVIPHKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTG 1473

Query: 181  ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
            E++W G+K +I +YCEECA CQRNK+ ALSP  LL PLEIP  +W DISMDFIEGLPKS 
Sbjct: 1474 EIYWKGMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSK 1533

Query: 241  GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
            G +VI VVVDR  KY HFL LKHPF AK VAE F+KEVVRLH +P+SIVSDRDK+F+S+F
Sbjct: 1534 GWDVIFVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHF 1593

Query: 301  WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
            WKE FRLA TKLNRS+ YHPQ++GQTEVVN S+E YLRCFCGE+P +W +W+ WAEYWYN
Sbjct: 1594 WKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYN 1653

Query: 361  TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TTY  S+G++PFQAVYGR PP L+YYGD  T  STLD+QLK+RDI LG LK         
Sbjct: 1654 TTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQER 1713

Query: 421  ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                              +RNEKLSPK+FGPY+ILE+IG VAY+
Sbjct: 1714 MKKHADHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRILERIGKVAYK 1773

Query: 481  LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMN-AKGDW 502
            LELPAAA IHPVFH+SQLKKA  +    + L  ++  N EW+  P+EV+ Y+ N A  +W
Sbjct: 1774 LELPAAAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEW 1833

[Close]

BLAST of CSPI03G26690 vs. NCBI nr
Match: KAA0066077.1 (Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa] >TYJ99820.1 Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 774.2 bits (1998), Expect = 6.7e-220
Identity = 382/594 (64.31%), Postives = 429/594 (72.22%), Query Frame = 0


Query: 1   MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
           +RDRA+PVYERELMAVVLAVQRWRPYLLGR F+VK DQ+SLKFLLEQRVIQPQY +WIAK
Sbjct: 241 LRDRAKPVYERELMAVVLAVQRWRPYLLGRRFVVKIDQRSLKFLLEQRVIQPQYLKWIAK 300

Query: 61  FLGYSFE----------------------------------------------------- 120
            LGYSFE                                                     
Sbjct: 301 LLGYSFEVLYKPGLENKAADALSRVPSVVQLNQLTVPALIDLKLIREEVAQDDYLKQIIK 360

Query: 121 ---KGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              + EEV  YT Q G+L+YKGRIVIAK S LIPTILHTYHDSV  GH GFLRTYKRLT 
Sbjct: 361 RITEREEVPKYTMQHGMLQYKGRIVIAKSSTLIPTILHTYHDSVFEGHSGFLRTYKRLTG 420

Query: 181 ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
           ELFW G+K ++QKYCEEC  CQRNK+L+LSP  LLTPLEIPSR+W+ ISMDFIEGLPK++
Sbjct: 421 ELFWQGMKGDVQKYCEECTVCQRNKSLSLSPAGLLTPLEIPSRIWDYISMDFIEGLPKAA 480

Query: 241 GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
           G +VILVVVDRF KYAHFL LKHPFDA+ VAEVF+KEVVRLH FP+SIVSDRDK+F+S+F
Sbjct: 481 GFDVILVVVDRFSKYAHFLALKHPFDAQIVAEVFVKEVVRLHGFPKSIVSDRDKVFLSHF 540

Query: 301 WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
           WKE FRLA TKLNRST YHPQT+GQTEVV+ SVE YLRCFCGERPK+W+KWI WAEYWYN
Sbjct: 541 WKELFRLAGTKLNRSTTYHPQTDGQTEVVSRSVEAYLRCFCGERPKEWIKWIHWAEYWYN 600

Query: 361 TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TYQ+SLGVSPFQAVYGR P  L+ YGD  T+ STLDEQLK+RDI LG LK         
Sbjct: 601 RTYQQSLGVSPFQAVYGRTPSPLVSYGDHSTTNSTLDEQLKQRDIALGALKEHLRVAQDK 660

Query: 421 ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                             RRNEKLSPKYFGPY++L+KIG VAYR
Sbjct: 661 MKTYADLKRRHVEFEEGDMVYLKLRPYRQVSMRKRRNEKLSPKYFGPYKVLKKIGTVAYR 720

Query: 481 LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMNAKGDWD 499
           LELP  ATIHPVFHISQLK+AF +  N + L  ++ E  EWLA+PDE FGYQ NAKG+W+
Sbjct: 721 LELPPTATIHPVFHISQLKRAFGDCQNPQNLAPYMTETHEWLAVPDEAFGYQKNAKGEWE 780

[Close]

BLAST of CSPI03G26690 vs. NCBI nr
Match: KAA0038753.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 701.8 bits (1810), Expect = 4.2e-198
Identity = 345/598 (57.69%), Postives = 408/598 (68.23%), Query Frame = 0


Query: 1    MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
            MRDRARPVYEREL+AVVLAVQRWRPYLLGR F VKTDQ+SLKFLLEQRV+QPQYQ+W+AK
Sbjct: 1475 MRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAK 1534

Query: 61   FLGYSF------------------------------------------------------ 120
             LGYSF                                                      
Sbjct: 1535 LLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPALQEITR 1594

Query: 121  --EKGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              E+G E+ +YT QQG+LK+KGR+VI  KS LIPTILHTYHDSV GGH GFLRTYKRLT 
Sbjct: 1595 ILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTG 1654

Query: 181  ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
            E++W G+K +I +YCEECA CQRNK+ ALSP  LL PLEIP  +W DISMDFIEGLPKS 
Sbjct: 1655 EIYWKGMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSK 1714

Query: 241  GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
            G +VI VVVDR  KY HFL LKHPF AK VAE F+KEVVRLH +P+SIVSDRDK+F+S+F
Sbjct: 1715 GWDVIFVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHF 1774

Query: 301  WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
            WKE FRLA TKLNRS+ YHPQ++GQTEVVN S+E YLRCFCGE+P +W +W+ WAEYWYN
Sbjct: 1775 WKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYN 1834

Query: 361  TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TTY  S+G++PFQAVYGR PP L+YYGD  T  STLD+QLK+RDI LG LK         
Sbjct: 1835 TTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQER 1894

Query: 421  ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                              +RNEKLSPK+FGPY++LE+IG VAY+
Sbjct: 1895 MKKHADHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYK 1954

Query: 481  LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMN-AKGDW 502
            LELPAAA IHPVFH+SQLKKA  +    + L  ++  N EW+  P+EV+ Y+ N A  +W
Sbjct: 1955 LELPAAAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEW 2014

[Close]

BLAST of CSPI03G26690 vs. NCBI nr
Match: KAA0035107.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 701.8 bits (1810), Expect = 4.2e-198
Identity = 346/598 (57.86%), Postives = 408/598 (68.23%), Query Frame = 0


Query: 1    MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
            MRDRARPVYEREL+AVVLAVQRWRPYLLGR F VKTDQ+SLKFLLEQRV+QPQYQ+W+AK
Sbjct: 1294 MRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAK 1353

Query: 61   FLGYSF------------------------------------------------------ 120
             LGYSF                                                      
Sbjct: 1354 LLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPALQEITR 1413

Query: 121  --EKGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              E+G E+ +YT QQG+LK+KGR+VI  KS LIPTILHTYHDSV GGH GFLRTYKRLT 
Sbjct: 1414 ILEEGMEIPHYTLQQGVLKFKGRLVIPHKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTG 1473

Query: 181  ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
            E++W G+K +I +YCEECA CQRNK+ ALSP  LL PLEIP  +W DISMDFIEGLPKS 
Sbjct: 1474 EIYWKGMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSK 1533

Query: 241  GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
            G +VI VVVDR  KY HFL LKHPF AK VAE F+KEVVRLH +P+SIVSDRDK+F+S+F
Sbjct: 1534 GWDVIFVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHF 1593

Query: 301  WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
            WKE FRLA TKLNRS+ YHPQ++GQTEVVN S+E YLRCFCGE+P +W +W+ WAEYWYN
Sbjct: 1594 WKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYN 1653

Query: 361  TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TTY  S+G++PFQAVYGR PP L+YYGD  T  STLD+QLK+RDI LG LK         
Sbjct: 1654 TTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQER 1713

Query: 421  ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                              +RNEKLSPK+FGPY+ILE+IG VAY+
Sbjct: 1714 MKKHADHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRILERIGKVAYK 1773

Query: 481  LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMN-AKGDW 502
            LELPAAA IHPVFH+SQLKKA  +    + L  ++  N EW+  P+EV+ Y+ N A  +W
Sbjct: 1774 LELPAAAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEW 1833

[Close]

BLAST of CSPI03G26690 vs. NCBI nr
Match: TYK08591.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 701.8 bits (1810), Expect = 4.2e-198
Identity = 345/598 (57.69%), Postives = 408/598 (68.23%), Query Frame = 0


Query: 1    MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
            MRDRARPVYEREL+AVVLAVQRWRPYLLGR F VKTDQ+SLKFLLEQRV+QPQYQ+W+AK
Sbjct: 1554 MRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAK 1613

Query: 61   FLGYSF------------------------------------------------------ 120
             LGYSF                                                      
Sbjct: 1614 LLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPALQEITR 1673

Query: 121  --EKGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              E+G E+ +YT QQG+LK+KGR+VI  KS LIPTILHTYHDSV GGH GFLRTYKRLT 
Sbjct: 1674 ILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTG 1733

Query: 181  ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
            E++W G+K +I +YCEECA CQRNK+ ALSP  LL PLEIP  +W DISMDFIEGLPKS 
Sbjct: 1734 EIYWKGMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSK 1793

Query: 241  GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
            G +VI VVVDR  KY HFL LKHPF AK VAE F+KEVVRLH +P+SIVSDRDK+F+S+F
Sbjct: 1794 GWDVIFVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHF 1853

Query: 301  WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
            WKE FRLA TKLNRS+ YHPQ++GQTEVVN S+E YLRCFCGE+P +W +W+ WAEYWYN
Sbjct: 1854 WKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYN 1913

Query: 361  TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TTY  S+G++PFQAVYGR PP L+YYGD  T  STLD+QLK+RDI LG LK         
Sbjct: 1914 TTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQER 1973

Query: 421  ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                              +RNEKLSPK+FGPY++LE+IG VAY+
Sbjct: 1974 MKKHADHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYK 2033

Query: 481  LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMN-AKGDW 502
            LELPAAA IHPVFH+SQLKKA  +    + L  ++  N EW+  P+EV+ Y+ N A  +W
Sbjct: 2034 LELPAAAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEW 2093

[Close]

BLAST of CSPI03G26690 vs. NCBI nr
Match: TYK24981.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 701.8 bits (1810), Expect = 4.2e-198
Identity = 345/598 (57.69%), Postives = 408/598 (68.23%), Query Frame = 0


Query: 1    MRDRARPVYERELMAVVLAVQRWRPYLLGRTFIVKTDQQSLKFLLEQRVIQPQYQRWIAK 60
            MRDRARPVYEREL+AVVLAVQRWRPYLLGR F VKTDQ+SLKFLLEQRV+QPQYQ+W+AK
Sbjct: 1032 MRDRARPVYERELLAVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVVQPQYQKWVAK 1091

Query: 61   FLGYSF------------------------------------------------------ 120
             LGYSF                                                      
Sbjct: 1092 LLGYSFEVVYQPGLENKAADALSRVPPAVHLSQITAPPMIDMEIIKEETKLDPALQEITR 1151

Query: 121  --EKGEEVKNYTWQQGLLKYKGRIVIAKKSALIPTILHTYHDSVLGGHFGFLRTYKRLTR 180
              E+G E+ +YT QQG+LK+KGR+VI  KS LIPTILHTYHDSV GGH GFLRTYKRLT 
Sbjct: 1152 ILEEGMEIPHYTLQQGVLKFKGRLVIPNKSTLIPTILHTYHDSVFGGHSGFLRTYKRLTG 1211

Query: 181  ELFWVGIKAEIQKYCEECATCQRNKTLALSPTSLLTPLEIPSRVWEDISMDFIEGLPKSS 240
            E++W G+K +I +YCEECA CQRNK+ ALSP  LL PLEIP  +W DISMDFIEGLPKS 
Sbjct: 1212 EIYWKGMKKDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSK 1271

Query: 241  GHEVILVVVDRFGKYAHFLGLKHPFDAKTVAEVFMKEVVRLHDFPQSIVSDRDKIFMSNF 300
            G +VI VVVDR  KY HFL LKHPF AK VAE F+KEVVRLH +P+SIVSDRDK+F+S+F
Sbjct: 1272 GWDVIFVVVDRLSKYGHFLLLKHPFSAKVVAETFVKEVVRLHGYPRSIVSDRDKVFLSHF 1331

Query: 301  WKEHFRLASTKLNRSTVYHPQTNGQTEVVNSSVEIYLRCFCGERPKQWMKWIPWAEYWYN 360
            WKE FRLA TKLNRS+ YHPQ++GQTEVVN S+E YLRCFCGE+P +W +W+ WAEYWYN
Sbjct: 1332 WKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPAEWSQWLHWAEYWYN 1391

Query: 361  TTYQRSLGVSPFQAVYGRAPPALLYYGDRGTSISTLDEQLKERDIVLGVLKNIC------ 420
            TTY  S+G++PFQAVYGR PP L+YYGD  T  STLD+QLK+RDI LG LK         
Sbjct: 1392 TTYHSSIGITPFQAVYGRLPPPLIYYGDMETPNSTLDQQLKDRDITLGALKEHLKLAQER 1451

Query: 421  ----------------------------------RRNEKLSPKYFGPYQILEKIGPVAYR 480
                                              +RNEKLSPK+FGPY++LE+IG VAY+
Sbjct: 1452 MKKHADHKRREVEFQEGDMVFLKLRPYRQTSLRKKRNEKLSPKFFGPYRVLERIGKVAYK 1511

Query: 481  LELPAAATIHPVFHISQLKKAFEESANKEELVSFLIENQEWLAIPDEVFGYQMN-AKGDW 502
            LELPAAA IHPVFH+SQLKKA  +    + L  ++  N EW+  P+EV+ Y+ N A  +W
Sbjct: 1512 LELPAAAAIHPVFHVSQLKKAVGKGETVQPLNPYMNANHEWITRPEEVYSYRKNPATKEW 1571

The following BLAST results are available for this feature:

BLAST of CSPI03G26690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	8.6e-45	31.02	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	8.6e-45	31.02	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	8.6e-45	31.02	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	8.6e-45	31.02	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	8.6e-45	31.02	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI03G26690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VG68	3.2e-220	64.31	Transposon Tf2-9 polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5D3DMY9	2.0e-198	57.69	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T725	2.0e-198	57.69	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3C9P5	2.0e-198	57.69	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T0J9	2.0e-198	57.86	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of CSPI03G26690 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066077.1	6.7e-220	64.31	Transposon Tf2-9 polyprotein [Cucumis melo var. makuwa] >TYJ99820.1 Transposon T...	[more]
KAA0038753.1	4.2e-198	57.69	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035107.1	4.2e-198	57.86	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK08591.1	4.2e-198	57.69	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK24981.1	4.2e-198	57.69	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI03G26690 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 158..348 e-value: 1.3E-48 score: 166.9
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 6..64 e-value: 1.4E-12 score: 47.8
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 94..150 e-value: 1.1E-17 score: 63.9
None	No IPR available	GENE3D	1.10.340.70		coord: 60..149 e-value: 1.0E-16 score: 62.9
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 72..320
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 427..502 score: 8.557401
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 161..323 score: 16.768711
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 6..67
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 391..467
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 161..318

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G26690.1	CSPI03G26690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding