CSPI03G26540 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G26540
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	cyclic nucleotide-gated ion channel 1-like isoform X3
Location	Chr3: 23983328 .. 23983702 (-)
RNA-Seq Expression	CSPI03G26540
Synteny	CSPI03G26540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCATTCGCAGGTTCCAATGCTTAAAGAATTTGAAGAGGAGAAGTTAGAAGAGGTGATGAAGGATATGAAGCCAATGGTTTTTGCAGAGTATAGCTATATTATTCGAGAGGGGGAGCGTGTTGAGCAGATGCTACTATTCACGAAAGGTATGGGATTGAAATTTAGCAAGAGCACTGGAGCTAGAACAACGATTAGCACTTTTGGAAAAGGTGATTTATTTGGGGAGCAGCTACTGATTTGGGCAGTGGAAAATCTTCATGTGTCTGAAATTCCTTTGTTCGAATGTACACTCAAGACACAGACCCAAATGGAAGCCTTCACTCTTAAGGCTATTGATCCACAATATCATATCATACCAAGTGGGACATAA

mRNA sequence

ATGTTTCATTCGCAGGTTCCAATGCTTAAAGAATTTGAAGAGGAGAAGTTAGAAGAGGTGATGAAGGATATGAAGCCAATGGTTTTTGCAGAGTATAGCTATATTATTCGAGAGGGGGAGCGTGTTGAGCAGATGCTACTATTCACGAAAGGTATGGGATTGAAATTTAGCAAGAGCACTGGAGCTAGAACAACGATTAGCACTTTTGGAAAAGGTGATTTATTTGGGGAGCAGCTACTGATTTGGGCAGTGGAAAATCTTCATGTGTCTGAAATTCCTTTGTTCGAATGTACACTCAAGACACAGACCCAAATGGAAGCCTTCACTCTTAAGGCTATTGATCCACAATATCATATCATACCAAGTGGGACATAA

Coding sequence (CDS)

ATGTTTCATTCGCAGGTTCCAATGCTTAAAGAATTTGAAGAGGAGAAGTTAGAAGAGGTGATGAAGGATATGAAGCCAATGGTTTTTGCAGAGTATAGCTATATTATTCGAGAGGGGGAGCGTGTTGAGCAGATGCTACTATTCACGAAAGGTATGGGATTGAAATTTAGCAAGAGCACTGGAGCTAGAACAACGATTAGCACTTTTGGAAAAGGTGATTTATTTGGGGAGCAGCTACTGATTTGGGCAGTGGAAAATCTTCATGTGTCTGAAATTCCTTTGTTCGAATGTACACTCAAGACACAGACCCAAATGGAAGCCTTCACTCTTAAGGCTATTGATCCACAATATCATATCATACCAAGTGGGACATAA

Protein sequence

MFHSQVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGARTTISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYHIIPSGT*

Homology

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BLAST of CSPI03G26540 vs. ExPASy Swiss-Prot
Match: O65717 (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12
Identity = 38/115 (33.04%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VPM ++ +E+ L+ +   ++P+++ E SYI+REG+ V++ML   +G  L  + + G   
Sbjct: 483 RVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTG 542

Query: 65  TIST--FGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQY 118
            +++   G GD  GE+LL WA++    S +P+   T++   ++EAF LKA D ++
Sbjct: 543 FLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKF 597

[Close]

BLAST of CSPI03G26540 vs. ExPASy Swiss-Prot
Match: Q9S9N5 (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 GN=CNGC7 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 1.7e-10
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VP+    +E  L+ + + +KP +F E +YI+REG+ V +M+   +G  L+   + G R+
Sbjct: 499 RVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGR-LESVTTDGGRS 558

Query: 65  TISTFG---KGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKA 113
                G   +GD  GE+LL WA++    S +P    T+K  T++EAF L+A
Sbjct: 559 GFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEA 608

[Close]

BLAST of CSPI03G26540 vs. ExPASy Swiss-Prot
Match: O82226 (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana OX=3702 GN=CNGC6 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VP+ +  +E  L+ + + +KP +F E SY++REG+ V +ML   +G  L+   + G R+
Sbjct: 511 RVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGR-LESVTTDGGRS 570

Query: 65  TI---STFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKA 113
                S   +GD  G++LL WA++    S +P    T+K  T++EAF L A
Sbjct: 571 GFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIA 620

[Close]

BLAST of CSPI03G26540 vs. ExPASy Swiss-Prot
Match: Q9FXH6 (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 GN=CNGC8 PE=3 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-10
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VP+    +E  L+ + + +KP ++ E +YI+REG+ V +ML   +G  L+   + G R+
Sbjct: 505 RVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGR-LESVTTDGGRS 564

Query: 65  TISTFG---KGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKA 113
                G   +GD  GE+LL WA++    S +P    T+K  T++EAF L+A
Sbjct: 565 GFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEA 614

[Close]

BLAST of CSPI03G26540 vs. ExPASy Swiss-Prot
Match: Q9LD40 (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 GN=CNGC13 PE=3 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-10
Identity = 40/113 (35.40%), Postives = 62/113 (54.87%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VP+ +  +E+ L+ V   +KP+++ E SY IREG+ VE+ML   +G  L  + + G RT
Sbjct: 471 KVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGK-LMSATTNGGRT 530

Query: 65  TIST---FGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAID 115
                      D  GE LL WA++    S  P+   T++  T++EAF L A D
Sbjct: 531 GFFNAVYLKPSDFCGEDLLTWALDPQSSSHFPISTRTVQALTEVEAFALAADD 582

[Close]

BLAST of CSPI03G26540 vs. ExPASy TrEMBL
Match: A0A5D3E6K4 (Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold788G00140 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.2e-44
Identity = 94/114 (82.46%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VPMLKEFEEEKL ++MKDMKPMVF E SYIIREGE +EQMLLFTKGMGL FSKSTG RT
Sbjct: 373 RVPMLKEFEEEKLTKMMKDMKPMVFGEQSYIIREGEPIEQMLLFTKGMGLTFSKSTGTRT 432

Query: 65  TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYH 119
           TI+TFGKGDLFGEQLL WA  NL   EIPL +CTLKTQTQMEAF LKAIDPQYH
Sbjct: 433 TINTFGKGDLFGEQLLDWAAGNLPTFEIPLSKCTLKTQTQMEAFALKAIDPQYH 486

[Close]

BLAST of CSPI03G26540 vs. ExPASy TrEMBL
Match: A0A1S4DYA3 (cyclic nucleotide-gated ion channel 1-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.2e-44
Identity = 95/114 (83.33%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +V MLKEFEEEKL+E+MKDMKPMVF E SYIIREGE VEQMLLFTKGMGL FSKSTG RT
Sbjct: 307 RVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKSTGTRT 366

Query: 65  TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYH 119
           TI+ FGKGDLFGEQLL WA ENL VSEIPL +CTLK  TQMEAF LKAIDPQYH
Sbjct: 367 TINAFGKGDLFGEQLLKWAAENLPVSEIPLSKCTLKAHTQMEAFALKAIDPQYH 420

[Close]

BLAST of CSPI03G26540 vs. ExPASy TrEMBL
Match: A0A5A7V0L3 (Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00660 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.2e-44
Identity = 95/114 (83.33%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +V MLKEFEEEKL+E+MKDMKPMVF E SYIIREGE VEQMLLFTKGMGL FSKSTG RT
Sbjct: 415 RVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKSTGTRT 474

Query: 65  TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYH 119
           TI+ FGKGDLFGEQLL WA ENL VSEIPL +CTLK  TQMEAF LKAIDPQYH
Sbjct: 475 TINAFGKGDLFGEQLLKWAAENLPVSEIPLSKCTLKAHTQMEAFALKAIDPQYH 528

[Close]

BLAST of CSPI03G26540 vs. ExPASy TrEMBL
Match: A0A5D3DCD7 (Cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00390 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.2e-44
Identity = 95/114 (83.33%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +V MLKEFEEEKL+E+MKDMKPMVF E SYIIREGE VEQMLLFTKGMGL FSKSTG RT
Sbjct: 410 RVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKSTGTRT 469

Query: 65  TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYH 119
           TI+ FGKGDLFGEQLL WA ENL VSEIPL +CTLK  TQMEAF LKAIDPQYH
Sbjct: 470 TINAFGKGDLFGEQLLKWAAENLPVSEIPLSKCTLKAHTQMEAFALKAIDPQYH 523

[Close]

BLAST of CSPI03G26540 vs. ExPASy TrEMBL
Match: A0A1S3BLM4 (cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 4.2e-44
Identity = 95/114 (83.33%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +V MLKEFEEEKL+E+MKDMKPMVF E SYIIREGE VEQMLLFTKGMGL FSKSTG RT
Sbjct: 414 RVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKSTGTRT 473

Query: 65  TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYH 119
           TI+ FGKGDLFGEQLL WA ENL VSEIPL +CTLK  TQMEAF LKAIDPQYH
Sbjct: 474 TINAFGKGDLFGEQLLKWAAENLPVSEIPLSKCTLKAHTQMEAFALKAIDPQYH 527

[Close]

BLAST of CSPI03G26540 vs. NCBI nr
Match: KAE8650811.1 (hypothetical protein Csa_017590, partial [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.3e-60
Identity = 121/121 (100.00%), Postives = 121/121 (100.00%), Query Frame = 0


Query: 1   MFHSQVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKST 60
           MFHSQVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKST
Sbjct: 1   MFHSQVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKST 60

Query: 61  GARTTISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYHII 120
           GARTTISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYHII
Sbjct: 61  GARTTISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYHII 120

Query: 121 P 122
           P
Sbjct: 121 P 121

[Close]

BLAST of CSPI03G26540 vs. NCBI nr
Match: TYK31713.1 (cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 187.6 bits (475), Expect = 6.6e-44
Identity = 94/114 (82.46%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VPMLKEFEEEKL ++MKDMKPMVF E SYIIREGE +EQMLLFTKGMGL FSKSTG RT
Sbjct: 373 RVPMLKEFEEEKLTKMMKDMKPMVFGEQSYIIREGEPIEQMLLFTKGMGLTFSKSTGTRT 432

Query: 65  TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYH 119
           TI+TFGKGDLFGEQLL WA  NL   EIPL +CTLKTQTQMEAF LKAIDPQYH
Sbjct: 433 TINTFGKGDLFGEQLLDWAAGNLPTFEIPLSKCTLKTQTQMEAFALKAIDPQYH 486

[Close]

BLAST of CSPI03G26540 vs. NCBI nr
Match: XP_016900693.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo] >TYK21168.1 cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 187.2 bits (474), Expect = 8.7e-44
Identity = 95/114 (83.33%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +V MLKEFEEEKL+E+MKDMKPMVF E SYIIREGE VEQMLLFTKGMGL FSKSTG RT
Sbjct: 410 RVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKSTGTRT 469

Query: 65  TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYH 119
           TI+ FGKGDLFGEQLL WA ENL VSEIPL +CTLK  TQMEAF LKAIDPQYH
Sbjct: 470 TINAFGKGDLFGEQLLKWAAENLPVSEIPLSKCTLKAHTQMEAFALKAIDPQYH 523

[Close]

BLAST of CSPI03G26540 vs. NCBI nr
Match: XP_008449547.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 8.7e-44
Identity = 95/114 (83.33%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +V MLKEFEEEKL+E+MKDMKPMVF E SYIIREGE VEQMLLFTKGMGL FSKSTG RT
Sbjct: 414 RVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKSTGTRT 473

Query: 65  TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYH 119
           TI+ FGKGDLFGEQLL WA ENL VSEIPL +CTLK  TQMEAF LKAIDPQYH
Sbjct: 474 TINAFGKGDLFGEQLLKWAAENLPVSEIPLSKCTLKAHTQMEAFALKAIDPQYH 527

[Close]

BLAST of CSPI03G26540 vs. NCBI nr
Match: XP_016900694.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo] >XP_016900695.1 PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo])

HSP 1 Score: 187.2 bits (474), Expect = 8.7e-44
Identity = 95/114 (83.33%), Postives = 100/114 (87.72%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +V MLKEFEEEKL+E+MKDMKPMVF E SYIIREGE VEQMLLFTKGMGL FSKSTG RT
Sbjct: 307 RVLMLKEFEEEKLKEMMKDMKPMVFGEQSYIIREGEPVEQMLLFTKGMGLTFSKSTGTRT 366

Query: 65  TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQYH 119
           TI+ FGKGDLFGEQLL WA ENL VSEIPL +CTLK  TQMEAF LKAIDPQYH
Sbjct: 367 TINAFGKGDLFGEQLLKWAAENLPVSEIPLSKCTLKAHTQMEAFALKAIDPQYH 420

[Close]

BLAST of CSPI03G26540 vs. TAIR 10
Match: AT5G53130.1 (cyclic nucleotide gated channel 1 )

HSP 1 Score: 74.3 bits (181), Expect = 7.6e-14
Identity = 38/115 (33.04%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VPM ++ +E+ L+ +   ++P+++ E SYI+REG+ V++ML   +G  L  + + G   
Sbjct: 483 RVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTG 542

Query: 65  TIST--FGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQY 118
            +++   G GD  GE+LL WA++    S +P+   T++   ++EAF LKA D ++
Sbjct: 543 FLNSEYLGAGDFCGEELLTWALDPHSSSNLPISTRTVRALMEVEAFALKADDLKF 597

[Close]

BLAST of CSPI03G26540 vs. TAIR 10
Match: AT1G15990.1 (cyclic nucleotide gated channel 7 )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VP+    +E  L+ + + +KP +F E +YI+REG+ V +M+   +G  L+   + G R+
Sbjct: 470 RVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGR-LESVTTDGGRS 529

Query: 65  TISTFG---KGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKA 113
                G   +GD  GE+LL WA++    S +P    T+K  T++EAF L+A
Sbjct: 530 GFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEA 579

[Close]

BLAST of CSPI03G26540 vs. TAIR 10
Match: AT1G19780.1 (cyclic nucleotide gated channel 8 )

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VP+    +E  L+ + + +KP ++ E +YI+REG+ V +ML   +G  L+   + G R+
Sbjct: 505 RVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGR-LESVTTDGGRS 564

Query: 65  TISTFG---KGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKA 113
                G   +GD  GE+LL WA++    S +P    T+K  T++EAF L+A
Sbjct: 565 GFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEA 614

[Close]

BLAST of CSPI03G26540 vs. TAIR 10
Match: AT2G23980.1 (cyclic nucleotide-gated channel 6 )

HSP 1 Score: 66.6 bits (161), Expect = 1.6e-11
Identity = 38/111 (34.23%), Postives = 64/111 (57.66%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VP+ +  +E  L+ + + +KP +F E SY++REG+ V +ML   +G  L+   + G R+
Sbjct: 511 RVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGR-LESVTTDGGRS 570

Query: 65  TI---STFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKA 113
                S   +GD  G++LL WA++    S +P    T+K  T++EAF L A
Sbjct: 571 GFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIA 620

[Close]

BLAST of CSPI03G26540 vs. TAIR 10
Match: AT2G28260.1 (cyclic nucleotide-gated channel 15 )

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-11
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 0


Query: 5   QVPMLKEFEEEKLEEVMKDMKPMVFAEYSYIIREGERVEQMLLFTKGMGLKFSKSTGART 64
           +VP+  + +E  L+ + + +KP +  E ++++REG+ V +ML   +G  L    + G RT
Sbjct: 468 RVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRG-HLDSYTTNGGRT 527

Query: 65  ---TISTFGKGDLFGEQLLIWAVENLHVSEIPLFECTLKTQTQMEAFTLKAIDPQY 118
                   G GD  GE+LL WA++   V  +P    T+K   ++EAF LKA D Q+
Sbjct: 528 GFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQF 582

The following BLAST results are available for this feature:

BLAST of CSPI03G26540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65717	1.1e-12	33.04	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 P...	[more]
Q9S9N5	1.7e-10	34.23	Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 G...	[more]
O82226	2.2e-10	34.23	Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9FXH6	2.2e-10	34.23	Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9LD40	3.8e-10	35.40	Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CSPI03G26540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E6K4	3.2e-44	82.46	Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A1S4DYA3	4.2e-44	83.33	cyclic nucleotide-gated ion channel 1-like isoform X3 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7V0L3	4.2e-44	83.33	Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A5D3DCD7	4.2e-44	83.33	Cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo var. makuw...	[more]
A0A1S3BLM4	4.2e-44	83.33	cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CSPI03G26540 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650811.1	1.3e-60	100.00	hypothetical protein Csa_017590, partial [Cucumis sativus]	[more]
TYK31713.1	6.6e-44	82.46	cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_016900693.1	8.7e-44	83.33	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo] ...	[more]
XP_008449547.1	8.7e-44	83.33	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]	[more]
XP_016900694.1	8.7e-44	83.33	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X3 [Cucumis melo] ...	[more]

BLAST of CSPI03G26540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53130.1	7.6e-14	33.04	cyclic nucleotide gated channel 1	[more]
AT1G15990.1	1.2e-11	34.23	cyclic nucleotide gated channel 7	[more]
AT1G19780.1	1.6e-11	34.23	cyclic nucleotide gated channel 8	[more]
AT2G23980.1	1.6e-11	34.23	cyclic nucleotide-gated channel 6	[more]
AT2G28260.1	2.7e-11	33.62	cyclic nucleotide-gated channel 15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 6..119 e-value: 4.5E-23 score: 83.4
None	No IPR available	PANTHER	PTHR45651	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	coord: 4..114
None	No IPR available	PANTHER	PTHR45651:SF65	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1-LIKE	coord: 4..114
IPR000595	Cyclic nucleotide-binding domain	PROSITE	PS50042	CNMP_BINDING_3	coord: 8..81 score: 14.4244
IPR018490	Cyclic nucleotide-binding-like	SUPERFAMILY	51206	cAMP-binding domain-like	coord: 5..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G26540.1	CSPI03G26540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0034220	ion transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005216	ion channel activity