CSPI03G26490 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G26490
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type domain-containing protein
Location	Chr3: 23906742 .. 23907996 (+)
RNA-Seq Expression	CSPI03G26490
Synteny	CSPI03G26490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTTCTTCTTCTTCTTCTCTTCTTTTCTTTCATCAACCTAGCAACCAGCTCTGAATTATGCTTTGATTCTCACTGTACTGGTGATTATCAGACGATTCGATTCCCTTTTAGGATTGTAAATGGCCAACCAAAGTCCTGTGGCTATCCTGGCTTTGATTTGTCTTGCCATCCCACAGGTGAACCGTTGCTTCATCTTCCTCATTCTGGAGATTTCATTGTCCAAAATATAGATTATATGCATCAAGAAATAAGGATCAATGATCCAGACTACTGTCTTCCTAAAAAGATTCTCTACCTCAATCTTTCTGGATCACCATTTGTCAAGAAAAACAGTCAAACTGTTGCCTTCTTTAATTGTTCATCTAATTACATACCATATTGGTATAATGATCCAATTTATTGCCTAAGTAGCCATTCACACACAGTCTATGCTTCATCTTCTCCAATGCTTATAAACATGTTTGAATCAAACTGTGCTATGATAAAAACTGTTTCAGTGCCATCTTCATTTTCTTATTCGTCGAACCTGTGGGAATATCTTCTGTTAAAATGGGAAAATCCTGATTGTGGTAGGTGTGAATCAGTTGGTCAAAGATGTGAAGTCAAATCCAATTCAAGCAATGAAATTCAATGTACAGACTCTCAAGGTACCAAATGTGCAAACTTCTGAACTTAGCTAGTGAATATTGTAAGCAAGGATCTTGTAACCGTTGACCATTAATTGGGTATGATATATGTATTATTACTCTTAAGTTTAAGAGGTAGATCTTGTTATATGTGGCAGTATTAATAGTTTATGACAATTAAGTTTTTGCGTTTTGTCAGGGAGATCTAGAGTTGGAGCCAATGTTGTGTCTATAGCAATGGGAGTGGTAGCTGCTGTGATATGCTTTTTGGGTGTCCTGTGCTGCCTCTGTTTCAAAATAAATTTTCGTAGGAGAGGCAGTTCCAGTAGTATAGTCCATTGGACCGTATCTTCTCAGCGTACAAGAACGATGGGCCTAAATGGGGCGACAATTGAATCCTACCCAAAATTTGTATTGGATGAAAGCTTAAGCCTACCGAAGCCCAATAACAATGTTTGCCCAATTTGTTTGGCCCAATATCAGCCGAAAGAGATTGTGAAGAGTATACCCAATTGCCAACATTGTTTCCATGAATGTTGTATTGATGAATGGCTCCGATTGAAAGCTTCTTGCCCTGTTTGTAGGAAGTCTCCCATTGAAGCTCCACCCTCCAACTCTTCTTAG

mRNA sequence

ATGATTCTTCTTCTTCTTCTTCTCTTCTTTTCTTTCATCAACCTAGCAACCAGCTCTGAATTATGCTTTGATTCTCACTGTACTGGTGATTATCAGACGATTCGATTCCCTTTTAGGATTGTAAATGGCCAACCAAAGTCCTGTGGCTATCCTGGCTTTGATTTGTCTTGCCATCCCACAGGTGAACCGTTGCTTCATCTTCCTCATTCTGGAGATTTCATTGTCCAAAATATAGATTATATGCATCAAGAAATAAGGATCAATGATCCAGACTACTGTCTTCCTAAAAAGATTCTCTACCTCAATCTTTCTGGATCACCATTTGTCAAGAAAAACAGTCAAACTGTTGCCTTCTTTAATTGTTCATCTAATTACATACCATATTGGTATAATGATCCAATTTATTGCCTAAGTAGCCATTCACACACAGTCTATGCTTCATCTTCTCCAATGCTTATAAACATGTTTGAATCAAACTGTGCTATGATAAAAACTGTTTCAGTGCCATCTTCATTTTCTTATTCGTCGAACCTGTGGGAATATCTTCTGTTAAAATGGGAAAATCCTGATTGTGGTAGGTGTGAATCAGTTGGTCAAAGATGTGAAGTCAAATCCAATTCAAGCAATGAAATTCAATGTACAGACTCTCAAGGGAGATCTAGAGTTGGAGCCAATGTTGTGTCTATAGCAATGGGAGTGGTAGCTGCTGTGATATGCTTTTTGGGTGTCCTGTGCTGCCTCTGTTTCAAAATAAATTTTCGTAGGAGAGGCAGTTCCAGTAGTATAGTCCATTGGACCGTATCTTCTCAGCGTACAAGAACGATGGGCCTAAATGGGGCGACAATTGAATCCTACCCAAAATTTGTATTGGATGAAAGCTTAAGCCTACCGAAGCCCAATAACAATGTTTGCCCAATTTGTTTGGCCCAATATCAGCCGAAAGAGATTGTGAAGAGTATACCCAATTGCCAACATTGTTTCCATGAATGTTGTATTGATGAATGGCTCCGATTGAAAGCTTCTTGCCCTGTTTGTAGGAAGTCTCCCATTGAAGCTCCACCCTCCAACTCTTCTTAG

Coding sequence (CDS)

ATGATTCTTCTTCTTCTTCTTCTCTTCTTTTCTTTCATCAACCTAGCAACCAGCTCTGAATTATGCTTTGATTCTCACTGTACTGGTGATTATCAGACGATTCGATTCCCTTTTAGGATTGTAAATGGCCAACCAAAGTCCTGTGGCTATCCTGGCTTTGATTTGTCTTGCCATCCCACAGGTGAACCGTTGCTTCATCTTCCTCATTCTGGAGATTTCATTGTCCAAAATATAGATTATATGCATCAAGAAATAAGGATCAATGATCCAGACTACTGTCTTCCTAAAAAGATTCTCTACCTCAATCTTTCTGGATCACCATTTGTCAAGAAAAACAGTCAAACTGTTGCCTTCTTTAATTGTTCATCTAATTACATACCATATTGGTATAATGATCCAATTTATTGCCTAAGTAGCCATTCACACACAGTCTATGCTTCATCTTCTCCAATGCTTATAAACATGTTTGAATCAAACTGTGCTATGATAAAAACTGTTTCAGTGCCATCTTCATTTTCTTATTCGTCGAACCTGTGGGAATATCTTCTGTTAAAATGGGAAAATCCTGATTGTGGTAGGTGTGAATCAGTTGGTCAAAGATGTGAAGTCAAATCCAATTCAAGCAATGAAATTCAATGTACAGACTCTCAAGGGAGATCTAGAGTTGGAGCCAATGTTGTGTCTATAGCAATGGGAGTGGTAGCTGCTGTGATATGCTTTTTGGGTGTCCTGTGCTGCCTCTGTTTCAAAATAAATTTTCGTAGGAGAGGCAGTTCCAGTAGTATAGTCCATTGGACCGTATCTTCTCAGCGTACAAGAACGATGGGCCTAAATGGGGCGACAATTGAATCCTACCCAAAATTTGTATTGGATGAAAGCTTAAGCCTACCGAAGCCCAATAACAATGTTTGCCCAATTTGTTTGGCCCAATATCAGCCGAAAGAGATTGTGAAGAGTATACCCAATTGCCAACATTGTTTCCATGAATGTTGTATTGATGAATGGCTCCGATTGAAAGCTTCTTGCCCTGTTTGTAGGAAGTCTCCCATTGAAGCTCCACCCTCCAACTCTTCTTAG

Protein sequence

MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWEYLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICFLGVLCCLCFKINFRRRGSSSSIVHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSNSS*

Homology

[Close]

BLAST of CSPI03G26490 vs. ExPASy Swiss-Prot
Match: Q9SKK8 (RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2)

HSP 1 Score: 209.1 bits (531), Expect = 8.0e-53
Identity = 129/370 (34.86%), Postives = 201/370 (54.32%), Query Frame = 0


Query: 1   MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT 60
           ++ L+ L FF  +N A+  + C+   C+ +    RFPF + + QP+SCGY GF+L C   
Sbjct: 9   LLNLIFLFFFPLLN-ASEQKPCYSFSCSQESVVARFPFSLFSYQPESCGYSGFNLICKDD 68

Query: 61  GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN 120
               L LP S  F+V+ IDY  Q IR+NDP+ CL +++L  + SGSPF    S+   F  
Sbjct: 69  ANTTLKLPKSEPFLVKEIDYETQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLI 128

Query: 121 CSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSF-------- 180
           C            I CL + + + +      L +M  S+C + K + +P S+        
Sbjct: 129 CPKEANITASFRAIDCLGNTTSSFFVVQFENLGSM-PSSCHIFKILPLPFSWFVAYTTYP 188

Query: 181 --SYSSNLWEYLLLKWENPDCGRCE-SVGQRCEVKSNSSNEIQCTDS--QGRSRVGANVV 240
               S ++W    LKW++PDC  CE     RC  K+N+S++++C  S   G    G  V+
Sbjct: 189 DGQNSRDMW----LKWDSPDCRDCERRTNSRCGFKNNTSHQVECFSSVNPGLHNTGLQVL 248

Query: 241 SI----AMGVVAAVICFLGVLCCLCFKINFRRRGSSSSIVHWTVSSQ---RTRTMGLNGA 300
            I     +G + A+   +G++ C   +++ + + +  + +  +V+SQ       +GL+ +
Sbjct: 249 KIMCLSLVGPLTALTFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLDES 308

Query: 301 TIESYPKFVLDESLSLPKPNNN-VCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLK 350
           TIESY K  L ES  LP  +N+ VCPICL++Y  KE V+ +P C+HCFH  CID WL+L 
Sbjct: 309 TIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLH 368

[Close]

BLAST of CSPI03G26490 vs. ExPASy Swiss-Prot
Match: P0CH01 (Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.0e-52
Identity = 129/366 (35.25%), Postives = 194/366 (53.01%), Query Frame = 0


Query: 4   LLLLLFFSFINL-ATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE 63
           L L LFF F  L A+  + C  S C  D   +RFPF +++ QP+ CG+ GF+L C  + +
Sbjct: 7   LFLYLFFLFPLLHASHPQQCSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQCTASPK 66

Query: 64  PLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCS 123
             L LP+SG F+V+ IDY+ Q+IR+ DP+ CL +K+L  ++S SPF      +  F +C 
Sbjct: 67  TALKLPNSGTFLVREIDYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSCP 126

Query: 124 SNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVP---------SSFS 183
           +        D I CL + + +  A++S  L      +C ++KT+ VP         S FS
Sbjct: 127 NEVAKSSRFDSIPCLGNSTTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFS 186

Query: 184 YSSN---LWEYLLLKWENPDCGRCESVGQRCEVKSNSSNEIQC--TDSQGRSRVGANVVS 243
              N   LW    LKW++P C  CE    RC  +SN+S +++C   ++ G +     +  
Sbjct: 187 TDVNDKDLW----LKWDSPSCSDCERDFLRCGFRSNTSLQVKCFPFENSGYNTEPQVLKI 246

Query: 244 IAMGVVAAVICFLGVLCC-LCFKINFRRRGSSSSIVHWTVSSQRTRTMGLNGATIESYPK 303
           I + ++  +  F   +   +C    F      +  +     ++   T GL+ + IESY K
Sbjct: 247 ILLSIIGPLTIFATCIAVGVCTSERFASLIQRNVAIAALQPNEVIVTTGLDESIIESYKK 306

Query: 304 FVLDESLSLPKPNNN-VCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCR 353
             L ES  LP  N++ VCPICL++Y  KE V+ IP C HCFH  CID WL++  SCP+CR
Sbjct: 307 TELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCR 366

[Close]

BLAST of CSPI03G26490 vs. ExPASy Swiss-Prot
Match: P0CH02 (Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana OX=3702 GN=ATL21B PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.0e-52
Identity = 139/367 (37.87%), Postives = 195/367 (53.13%), Query Frame = 0


Query: 1   MILLLLLLFFSF-INLATSSELCFDS----HCTGDYQT-IRFPFRIVNGQPKSCGYPGFD 60
           + LL  LLFF F +  A++   C  S    H  G  +  IRFPF         C +P F+
Sbjct: 7   LFLLFFLLFFIFPLRHASNPSKCSSSNSRPHRCGPLEVPIRFPF---------CDHPLFN 66

Query: 61  LSCHPTGEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQ 120
           L C      +L LP SG F VQ IDY  Q+I INDP+ CL K++L  N+SGSPF  +   
Sbjct: 67  LLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENCLAKRLLTFNISGSPFSPRFDT 126

Query: 121 TVAFFNCSSNYI-PYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVP--SS 180
              F  C +  + P WY   I CLS+ + + +A+S+  L      +C ++K + VP  S 
Sbjct: 127 LYTFLTCPNELVLPSWY-PSIPCLSNSTSSFFATSNFALAESMLPSCQIVKRIYVPADSP 186

Query: 181 FS---YSSNLWEYLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVS 240
           F+   +SS L + LLL+W +P+C  CE    RC  K+ +S E++C  ++    +   VV+
Sbjct: 187 FAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNKASPEVKCFGAKKSGHLSRAVVA 246

Query: 241 --IAMGVVAAVICFLGVLCCLCFKINF--RRRGSSSSIVHWTVSSQRTRTM---GLNGAT 300
             I + ++ AVI F   + C+  +I+   RRR  +      TV  Q    M   GL+ +T
Sbjct: 247 VLICLSIIGAVILF---VTCIAIRIHNTPRRRHWAVPAAAATVMQQPREVMATRGLDQST 306

Query: 301 IESYPKFVLDESLSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKAS 349
           IE Y    L ES   P  N  VCPICL++Y  KE V+ IP C HCFH  CID WL++  S
Sbjct: 307 IEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGS 360

[Close]

BLAST of CSPI03G26490 vs. ExPASy Swiss-Prot
Match: Q9C7E9 (RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 2.4e-41
Identity = 103/297 (34.68%), Postives = 160/297 (53.87%), Query Frame = 0


Query: 70  SGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCSSN-YIPY 129
           SG F+V  I+Y  Q+I I+DP+ C+ K++L  N SGSPF    S    F  C +   IP 
Sbjct: 2   SGTFLVDEINYQKQQISISDPENCMVKRLLTFNTSGSPFSYGFSFYYTFLTCPNEVVIPV 61

Query: 130 WYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWE-------- 189
           W    I CLS+ + + +A+S+     +   +C ++K + VP    Y   + E        
Sbjct: 62  WSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQIVKGLYVPVDVIYKDVITEEKGFSTVP 121

Query: 190 ---YLLLKWENPDCGRCESVGQRCEVKSNSSNEIQC---TDSQGRSRVGANVVSIAM--G 249
               +LL+W +P+C  CE    RC  K+ +S E++       + +SR+   ++++ +  G
Sbjct: 122 WLGNVLLEWSSPNCRGCEKESLRCGFKNKASLEVKYLADPPDETKSRLRPLIITLCIIGG 181

Query: 250 VVAAVICFLGVLCCLCFKINFRRRGSSSSIVHWTVSSQR-TRTMGLNGATIESYPKFVLD 309
           + A  I  + +     F +N RR+ ++ +  + T   +    T GL+ +TIESY K  L 
Sbjct: 182 ITATCIAAIRIYNSERF-VNQRRQNAAITARNTTQQPRGVVVTTGLDQSTIESYKKVELG 241

Query: 310 ESLSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKS 349
           ES  LP  N  +CPICL++Y  KE V+ +P C HCFH  CIDEWL++ +SCPVCR S
Sbjct: 242 ESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCRNS 297

[Close]

BLAST of CSPI03G26490 vs. ExPASy Swiss-Prot
Match: P0CH03 (Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana OX=3702 GN=ATL21C PE=3 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 4.1e-41
Identity = 123/371 (33.15%), Postives = 180/371 (48.52%), Query Frame = 0


Query: 4   LLLLLFFSFINLATSSELCFDS-----HCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCH 63
           +  LLF   +  A++   C  S      C      IRFPF         C +  F+L C 
Sbjct: 11  VFFLLFLVSLRHASNPNNCSSSSSRPLRCGPLEVPIRFPF---------CNHARFNLHCT 70

Query: 64  PTGEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAF 123
              + +L LP SG F+V++IDY  Q+I INDP+ CL K++L  N+SGSPF         F
Sbjct: 71  DLNKTVLELPMSGTFLVRDIDYRRQKIYINDPN-CLAKRLLTFNISGSPFSPHFDILYTF 130

Query: 124 FNCSSNYI-PYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSN 183
            +C +  + P WY   I CLS+ + + +A+S+  L      +C ++K + VP++  +   
Sbjct: 131 LSCPNEVVLPSWY-PSIPCLSNSTSSFFATSNYSLAQSMLPSCQIVKRLHVPATSPFGET 190

Query: 184 LW------EYLLLKWENPDC-GRCESVGQRCEVKSNSSNEIQCTDS----------QGRS 243
            +      + LLL+W  PDC  +C    ++     N SN   C+ S           G  
Sbjct: 191 RFSSDLNNQSLLLEWALPDCRAKCLGATKKTGTIYN-SNIFSCSFSFLYDSRELFINGNL 250

Query: 244 RVGANVVSIAMGVVAAVICFLGVLCCLCFKINFRRRGSSSSIVHWTVSSQRTRTM---GL 303
             G  V+ I++  V   +       C+  ++    R   S+I   TV  Q    M   GL
Sbjct: 251 SSGVLVLVISLSAVTVFV----FPTCIAIRLYDSER-FDSAIAAATVMQQPREVMARRGL 310

Query: 304 NGATIESYPKFVLDESLSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLR 349
           + +TIE++ K  L ES  L   N  VCPICL++Y  KE V+ IP C HCFH  CID WL+
Sbjct: 311 DQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVWLK 364

[Close]

BLAST of CSPI03G26490 vs. ExPASy TrEMBL
Match: A0A0A0L8U8 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G603600 PE=4 SV=1)

HSP 1 Score: 743.8 bits (1919), Expect = 3.3e-211
Identity = 356/358 (99.44%), Postives = 356/358 (99.44%), Query Frame = 0


Query: 1   MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT 60
           MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT
Sbjct: 1   MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT 60

Query: 61  GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN 120
           GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN
Sbjct: 61  GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN 120

Query: 121 CSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWE 180
           CSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWE
Sbjct: 121 CSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWE 180

Query: 181 YLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICF 240
           YLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICF
Sbjct: 181 YLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICF 240

Query: 241 LGVLCCLCFKINFRRRGSSSSIVHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPN 300
           LGVLCCLCFKINFRRRGSSSSI HWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPN
Sbjct: 241 LGVLCCLCFKINFRRRGSSSSIAHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPN 300

Query: 301 NNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSNSS 359
           NNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSN S
Sbjct: 301 NNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSNPS 358

[Close]

BLAST of CSPI03G26490 vs. ExPASy TrEMBL
Match: A0A1S3B3D1 (putative RING-H2 finger protein ATL21A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485698 PE=4 SV=1)

HSP 1 Score: 649.4 bits (1674), Expect = 8.6e-183
Identity = 312/355 (87.89%), Postives = 331/355 (93.24%), Query Frame = 0


Query: 3   LLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE 62
           ++LLLLFFSF NLAT+SELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE
Sbjct: 1   MILLLLFFSFFNLATTSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE 60

Query: 63  PLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCS 122
            LLHLP SGDFIVQ IDYMHQEIRINDPD CLPKKIL LNLSGSPFVKKNSQ+ AF+NCS
Sbjct: 61  TLLHLPPSGDFIVQTIDYMHQEIRINDPDNCLPKKILSLNLSGSPFVKKNSQSFAFYNCS 120

Query: 123 SNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWEYL 182
           S+Y+PYWY DPIYCLSS S+TVYASSSP+LINMFESNC MIKTVSVPSS SYSS LW+ L
Sbjct: 121 SSYMPYWYIDPIYCLSSLSYTVYASSSPLLINMFESNCVMIKTVSVPSSSSYSSKLWDDL 180

Query: 183 LLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICFLG 242
           LLKWENPDCGRCES+GQRCE+KSNSSN IQCT+SQGRSRVGANVVSIAMGVVAAVICFLG
Sbjct: 181 LLKWENPDCGRCESIGQRCELKSNSSNGIQCTNSQGRSRVGANVVSIAMGVVAAVICFLG 240

Query: 243 VLCCLCFKINFRR-RGSSSSIVHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPNN 302
           +LCCLCFKINFRR R +SS+I HW VSSQ     GLNG TI+SYPKFVLDESLSLPKPNN
Sbjct: 241 LLCCLCFKINFRRTRSNSSNIAHWIVSSQ-----GLNGLTIDSYPKFVLDESLSLPKPNN 300

Query: 303 NVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSN 357
           NVCPICLAQY+PKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSP+EAPPSN
Sbjct: 301 NVCPICLAQYRPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPLEAPPSN 350

[Close]

BLAST of CSPI03G26490 vs. ExPASy TrEMBL
Match: A0A6J1CJI6 (putative RING-H2 finger protein ATL21B OS=Momordica charantia OX=3673 GN=LOC111011573 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 3.5e-128
Identity = 236/362 (65.19%), Postives = 276/362 (76.24%), Query Frame = 0


Query: 2   ILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSC--HP 61
           +L   LL   F N ATSS  CF+S C GDYQTIRFPFRI N QPKSCGYPGFDLSC  HP
Sbjct: 5   LLRCCLLLCCFFNPATSSGFCFESRCGGDYQTIRFPFRIENRQPKSCGYPGFDLSCQAHP 64

Query: 62  TG--EPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVA 121
           TG  +PLLHLP SGDF V+ IDY +QEI INDP+ CL  KIL LNLSGSPFV KNSQ   
Sbjct: 65  TGQDQPLLHLPPSGDFSVKYIDYRNQEIWINDPNNCLAGKILSLNLSGSPFVAKNSQDFT 124

Query: 122 FFNCSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSN 181
           FFNCS++Y P W  DPIYCL S SH V+ASSSP  I++  SNC +IKTVSVP S+S+   
Sbjct: 125 FFNCSADYSPSWLIDPIYCLGSSSHAVFASSSPATIDILSSNCVVIKTVSVPVSWSFWPK 184

Query: 182 LWEYLLLKWENPDCGRCESVGQRCEVKSNSS--NEIQCTD--SQGRSRVGANVVSIAMGV 241
           LW+ LLL+WENP CG CES+G  CE+K NSS  +EIQCT+          ++ +S+A+GV
Sbjct: 185 LWDDLLLRWENPACGSCESLGGGCELKPNSSSRHEIQCTNIPQAATPSNSSSALSMAVGV 244

Query: 242 VAAVICFLGVLCCLCFKINFRRRGSSSSIVHWTVSSQRTRTMGLNGATIESYPKFVLDES 301
           VAAV+CFL +LCCLC ++  R R SS    HWTVSSQ T TMGL+G TI+SYP FVL +S
Sbjct: 245 VAAVLCFLILLCCLCARLRSRPRNSSPE-THWTVSSQPTTTMGLDGPTIDSYPNFVLGQS 304

Query: 302 LSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAP 356
           L LP+PNNN+CPICL+QY+PKEI+KSIPNCQHCFH+ CI+EWLRL ASCPVCRKSP E+ 
Sbjct: 305 LRLPEPNNNICPICLSQYRPKEILKSIPNCQHCFHQHCIEEWLRLNASCPVCRKSPFESL 364

[Close]

BLAST of CSPI03G26490 vs. ExPASy TrEMBL
Match: A0A6J1CJP7 (putative RING-H2 finger protein ATL21A OS=Momordica charantia OX=3673 GN=LOC111011626 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 5.0e-114
Identity = 219/363 (60.33%), Postives = 269/363 (74.10%), Query Frame = 0


Query: 1   MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT 60
           M++L LLL   FI   +SS LCFD+ C GD QTIRFPFRI N QP SCGYPGFDLSCH T
Sbjct: 1   MLILCLLLLCFFIPAISSSGLCFDTRCQGDDQTIRFPFRIENRQPSSCGYPGFDLSCHAT 60

Query: 61  GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN 120
            +P LHLP SG+F VQ IDY +QEI +NDP+ CLP KIL LNLSGSPF  K +Q   FFN
Sbjct: 61  AQPRLHLPPSGNFSVQFIDYQNQEIWVNDPNGCLPGKILSLNLSGSPFAGKYTQDFTFFN 120

Query: 121 CSSNY-IPYWYN-DPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNL 180
           CS+   +PY  N +PI CLS  S+ V+ASSSPM+IN   SNC ++K+VSVP S+S+SS+L
Sbjct: 121 CSAKVRLPYGLNLNPISCLSGLSYAVFASSSPMIINDLSSNCVVMKSVSVPVSWSFSSDL 180

Query: 181 WEYLLLKWENPDCGRCESVGQRCEVKSNSSNEIQC---TDSQGRSRV--GANVVSIAMGV 240
            + L L W+ P CG CES G RCE   NSSN+IQC   T  Q + R+  GA   ++A+GV
Sbjct: 181 RDDLQLAWKKPACGSCESRGGRCEPNPNSSNQIQCTPITQPQPKQRLPRGAR-YAVAIGV 240

Query: 241 -VAAVICFLGVLCCLCFKINF--RRRGSSSSI-VHWTVSSQRTRTMGLNGATIESYPKFV 300
            V A +CFLG+LCC C ++ +  R R  SSSI  HW +SSQ T TMGL+G TI+SYPKFV
Sbjct: 241 GVPAGLCFLGLLCCFCARLRYYSRPRARSSSIEAHWVISSQPTTTMGLDGPTIDSYPKFV 300

Query: 301 LDESLSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSP 353
           L +SL LP+PN ++CPICL++Y+PKEIVK+IP+CQHCFH+ CIDEWLRL ASCP CRK P
Sbjct: 301 LGQSLRLPEPNGSICPICLSEYRPKEIVKTIPDCQHCFHQDCIDEWLRLNASCPFCRKPP 360

[Close]

BLAST of CSPI03G26490 vs. ExPASy TrEMBL
Match: A0A1S3B3V5 (RING-H2 finger protein ATL22-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485698 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 7.2e-113
Identity = 220/355 (61.97%), Postives = 233/355 (65.63%), Query Frame = 0


Query: 3   LLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE 62
           ++LLLLFFSF NLAT+SELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT  
Sbjct: 1   MILLLLFFSFFNLATTSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT-- 60

Query: 63  PLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCS 122
                                                                       
Sbjct: 61  ------------------------------------------------------------ 120

Query: 123 SNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWEYL 182
                                                        VPSS SYSS LW+ L
Sbjct: 121 ---------------------------------------------VPSSSSYSSKLWDDL 180

Query: 183 LLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICFLG 242
           LLKWENPDCGRCES+GQRCE+KSNSSN IQCT+SQGRSRVGANVVSIAMGVVAAVICFLG
Sbjct: 181 LLKWENPDCGRCESIGQRCELKSNSSNGIQCTNSQGRSRVGANVVSIAMGVVAAVICFLG 240

Query: 243 VLCCLCFKINFRR-RGSSSSIVHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPNN 302
           +LCCLCFKINFRR R +SS+I HW VSSQ     GLNG TI+SYPKFVLDESLSLPKPNN
Sbjct: 241 LLCCLCFKINFRRTRSNSSNIAHWIVSSQ-----GLNGLTIDSYPKFVLDESLSLPKPNN 243

Query: 303 NVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSN 357
           NVCPICLAQY+PKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSP+EAPPSN
Sbjct: 301 NVCPICLAQYRPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPLEAPPSN 243

[Close]

BLAST of CSPI03G26490 vs. NCBI nr
Match: XP_004151260.2 (putative RING-H2 finger protein ATL21B [Cucumis sativus] >KGN58273.1 hypothetical protein Csa_017654 [Cucumis sativus])

HSP 1 Score: 743.8 bits (1919), Expect = 6.9e-211
Identity = 356/358 (99.44%), Postives = 356/358 (99.44%), Query Frame = 0


Query: 1   MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT 60
           MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT
Sbjct: 1   MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT 60

Query: 61  GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN 120
           GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN
Sbjct: 61  GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN 120

Query: 121 CSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWE 180
           CSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWE
Sbjct: 121 CSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWE 180

Query: 181 YLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICF 240
           YLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICF
Sbjct: 181 YLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICF 240

Query: 241 LGVLCCLCFKINFRRRGSSSSIVHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPN 300
           LGVLCCLCFKINFRRRGSSSSI HWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPN
Sbjct: 241 LGVLCCLCFKINFRRRGSSSSIAHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPN 300

Query: 301 NNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSNSS 359
           NNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSN S
Sbjct: 301 NNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSNPS 358

[Close]

BLAST of CSPI03G26490 vs. NCBI nr
Match: XP_008441616.1 (PREDICTED: putative RING-H2 finger protein ATL21A isoform X1 [Cucumis melo])

HSP 1 Score: 649.4 bits (1674), Expect = 1.8e-182
Identity = 312/355 (87.89%), Postives = 331/355 (93.24%), Query Frame = 0


Query: 3   LLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE 62
           ++LLLLFFSF NLAT+SELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE
Sbjct: 1   MILLLLFFSFFNLATTSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE 60

Query: 63  PLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCS 122
            LLHLP SGDFIVQ IDYMHQEIRINDPD CLPKKIL LNLSGSPFVKKNSQ+ AF+NCS
Sbjct: 61  TLLHLPPSGDFIVQTIDYMHQEIRINDPDNCLPKKILSLNLSGSPFVKKNSQSFAFYNCS 120

Query: 123 SNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWEYL 182
           S+Y+PYWY DPIYCLSS S+TVYASSSP+LINMFESNC MIKTVSVPSS SYSS LW+ L
Sbjct: 121 SSYMPYWYIDPIYCLSSLSYTVYASSSPLLINMFESNCVMIKTVSVPSSSSYSSKLWDDL 180

Query: 183 LLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVSIAMGVVAAVICFLG 242
           LLKWENPDCGRCES+GQRCE+KSNSSN IQCT+SQGRSRVGANVVSIAMGVVAAVICFLG
Sbjct: 181 LLKWENPDCGRCESIGQRCELKSNSSNGIQCTNSQGRSRVGANVVSIAMGVVAAVICFLG 240

Query: 243 VLCCLCFKINFRR-RGSSSSIVHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPNN 302
           +LCCLCFKINFRR R +SS+I HW VSSQ     GLNG TI+SYPKFVLDESLSLPKPNN
Sbjct: 241 LLCCLCFKINFRRTRSNSSNIAHWIVSSQ-----GLNGLTIDSYPKFVLDESLSLPKPNN 300

Query: 303 NVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSN 357
           NVCPICLAQY+PKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSP+EAPPSN
Sbjct: 301 NVCPICLAQYRPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPLEAPPSN 350

[Close]

BLAST of CSPI03G26490 vs. NCBI nr
Match: XP_038903902.1 (RING-H2 finger protein ATL22-like [Benincasa hispida])

HSP 1 Score: 555.8 bits (1431), Expect = 2.7e-154
Identity = 270/355 (76.06%), Postives = 301/355 (84.79%), Query Frame = 0


Query: 3   LLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE 62
           ++L LL FSF NLATSS+ CFDS C GDYQTIRFPFRI N QPKSCGYPGFDLSCH  GE
Sbjct: 1   MILHLLMFSFFNLATSSDFCFDSRCIGDYQTIRFPFRIANVQPKSCGYPGFDLSCHGKGE 60

Query: 63  PLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCS 122
           PLLHLP SGDF VQ+IDY +QEIRINDPD CLPKKIL LNLSGSPFVKKN+Q  AFFNCS
Sbjct: 61  PLLHLPPSGDFSVQDIDYKNQEIRINDPDNCLPKKILSLNLSGSPFVKKNTQNFAFFNCS 120

Query: 123 SNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWEYL 182
           S+Y+P+   DPIYCLSS+S+ VYASSSPMLI+   SNC MIKTVSVP S  YSS  W+ L
Sbjct: 121 SHYLPHGDIDPIYCLSSYSYKVYASSSPMLIDELSSNCDMIKTVSVPFSSYYSSKPWDDL 180

Query: 183 LLKWENPDCGRCESVGQRCEVKSNSSNEIQCTD-SQGRSRVGANVVSIAMGVVAAVICFL 242
           LLKWENPDCGRCES+G++CE+K NSS+ I+CTD SQGR RV ANVV+IA+GVVAA ICFL
Sbjct: 181 LLKWENPDCGRCESLGRKCELKPNSSHAIRCTDISQGRPRVAANVVAIAVGVVAATICFL 240

Query: 243 GVLCCLCFKINFRRRGSSSSIVHWTVSSQRTRTMGLNGATIESYPKFVLDESLSLPKPNN 302
            +LCC C K+N + R  SSS  HWT+ S+RT TMGL+G TI SYPK VL ESL LPKPNN
Sbjct: 241 VLLCCFCIKMNCQSRTQSSS--HWTIFSRRTVTMGLDGPTIASYPKIVLGESLRLPKPNN 300

Query: 303 NVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAPPSN 357
           N+CPICLAQY+PKEIVK+IPNCQHCFHECCIDEWLRL ASCPVCRKSPIE+PPSN
Sbjct: 301 NICPICLAQYRPKEIVKTIPNCQHCFHECCIDEWLRLNASCPVCRKSPIESPPSN 353

[Close]

BLAST of CSPI03G26490 vs. NCBI nr
Match: XP_022141098.1 (putative RING-H2 finger protein ATL21B [Momordica charantia])

HSP 1 Score: 468.0 bits (1203), Expect = 7.3e-128
Identity = 236/362 (65.19%), Postives = 276/362 (76.24%), Query Frame = 0


Query: 2   ILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSC--HP 61
           +L   LL   F N ATSS  CF+S C GDYQTIRFPFRI N QPKSCGYPGFDLSC  HP
Sbjct: 5   LLRCCLLLCCFFNPATSSGFCFESRCGGDYQTIRFPFRIENRQPKSCGYPGFDLSCQAHP 64

Query: 62  TG--EPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVA 121
           TG  +PLLHLP SGDF V+ IDY +QEI INDP+ CL  KIL LNLSGSPFV KNSQ   
Sbjct: 65  TGQDQPLLHLPPSGDFSVKYIDYRNQEIWINDPNNCLAGKILSLNLSGSPFVAKNSQDFT 124

Query: 122 FFNCSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSN 181
           FFNCS++Y P W  DPIYCL S SH V+ASSSP  I++  SNC +IKTVSVP S+S+   
Sbjct: 125 FFNCSADYSPSWLIDPIYCLGSSSHAVFASSSPATIDILSSNCVVIKTVSVPVSWSFWPK 184

Query: 182 LWEYLLLKWENPDCGRCESVGQRCEVKSNSS--NEIQCTD--SQGRSRVGANVVSIAMGV 241
           LW+ LLL+WENP CG CES+G  CE+K NSS  +EIQCT+          ++ +S+A+GV
Sbjct: 185 LWDDLLLRWENPACGSCESLGGGCELKPNSSSRHEIQCTNIPQAATPSNSSSALSMAVGV 244

Query: 242 VAAVICFLGVLCCLCFKINFRRRGSSSSIVHWTVSSQRTRTMGLNGATIESYPKFVLDES 301
           VAAV+CFL +LCCLC ++  R R SS    HWTVSSQ T TMGL+G TI+SYP FVL +S
Sbjct: 245 VAAVLCFLILLCCLCARLRSRPRNSSPE-THWTVSSQPTTTMGLDGPTIDSYPNFVLGQS 304

Query: 302 LSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSPIEAP 356
           L LP+PNNN+CPICL+QY+PKEI+KSIPNCQHCFH+ CI+EWLRL ASCPVCRKSP E+ 
Sbjct: 305 LRLPEPNNNICPICLSQYRPKEILKSIPNCQHCFHQHCIEEWLRLNASCPVCRKSPFESL 364

[Close]

BLAST of CSPI03G26490 vs. NCBI nr
Match: XP_022141168.1 (putative RING-H2 finger protein ATL21A [Momordica charantia])

HSP 1 Score: 421.0 bits (1081), Expect = 1.0e-113
Identity = 219/363 (60.33%), Postives = 269/363 (74.10%), Query Frame = 0


Query: 1   MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT 60
           M++L LLL   FI   +SS LCFD+ C GD QTIRFPFRI N QP SCGYPGFDLSCH T
Sbjct: 1   MLILCLLLLCFFIPAISSSGLCFDTRCQGDDQTIRFPFRIENRQPSSCGYPGFDLSCHAT 60

Query: 61  GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN 120
            +P LHLP SG+F VQ IDY +QEI +NDP+ CLP KIL LNLSGSPF  K +Q   FFN
Sbjct: 61  AQPRLHLPPSGNFSVQFIDYQNQEIWVNDPNGCLPGKILSLNLSGSPFAGKYTQDFTFFN 120

Query: 121 CSSNY-IPYWYN-DPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNL 180
           CS+   +PY  N +PI CLS  S+ V+ASSSPM+IN   SNC ++K+VSVP S+S+SS+L
Sbjct: 121 CSAKVRLPYGLNLNPISCLSGLSYAVFASSSPMIINDLSSNCVVMKSVSVPVSWSFSSDL 180

Query: 181 WEYLLLKWENPDCGRCESVGQRCEVKSNSSNEIQC---TDSQGRSRV--GANVVSIAMGV 240
            + L L W+ P CG CES G RCE   NSSN+IQC   T  Q + R+  GA   ++A+GV
Sbjct: 181 RDDLQLAWKKPACGSCESRGGRCEPNPNSSNQIQCTPITQPQPKQRLPRGAR-YAVAIGV 240

Query: 241 -VAAVICFLGVLCCLCFKINF--RRRGSSSSI-VHWTVSSQRTRTMGLNGATIESYPKFV 300
            V A +CFLG+LCC C ++ +  R R  SSSI  HW +SSQ T TMGL+G TI+SYPKFV
Sbjct: 241 GVPAGLCFLGLLCCFCARLRYYSRPRARSSSIEAHWVISSQPTTTMGLDGPTIDSYPKFV 300

Query: 301 LDESLSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKSP 353
           L +SL LP+PN ++CPICL++Y+PKEIVK+IP+CQHCFH+ CIDEWLRL ASCP CRK P
Sbjct: 301 LGQSLRLPEPNGSICPICLSEYRPKEIVKTIPDCQHCFHQDCIDEWLRLNASCPFCRKPP 360

[Close]

BLAST of CSPI03G26490 vs. TAIR 10
Match: AT5G53110.1 (RING/U-box superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 5.1e-71
Identity = 161/373 (43.16%), Postives = 219/373 (58.71%), Query Frame = 0


Query: 3   LLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGY-PGFDLSC--HP 62
           LL L L        TS+  C ++ C  D   IRFPFR+ + Q  SCGY  GFDL+C  + 
Sbjct: 11  LLFLSLLIPTTTTTTSTVTCTNAVCRRDGPIIRFPFRLKHQQSHSCGYDKGFDLTCDINA 70

Query: 63  TGEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFF 122
                + LP SG+F V+ IDY  QEI INDP+ CLP++IL LNL+ +PF     +   FF
Sbjct: 71  GNRTTITLPFSGNFTVEEIDYAAQEIWINDPNNCLPQRILQLNLNSTPFSGVYMRQFTFF 130

Query: 123 NC-SSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFES-NCAMIKTVSVPSSFSY--- 182
           NC +S Y+ +   +PI CLS  + TV+A+ SP +IN   S +C ++KTV VP  + +   
Sbjct: 131 NCPTSEYLRFRPLNPITCLSGKNSTVFATPSPRVINYLSSQSCRLMKTVYVPVRWPFYEQ 190

Query: 183 ---SSNLWEYLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCT--DSQGRSRVGANVVSI 242
              SS+L + L L W  P C RCE  G +C +KSNSS EI C+        R     +++
Sbjct: 191 IVSSSDLSDNLWLTWRVPRCSRCEIKGGKCGIKSNSSREIICSHVHKPAIPRRARYAIAV 250

Query: 243 AMGVVAAVICFLGVLCCLCFKINF---RRR-----GSSSSIVHWTVSSQRTRTMGLNGAT 302
             G+  A+I F G+ C +  KI+    RRR       +++  H+  SS     MGL+G T
Sbjct: 251 GAGIPGALIVF-GLFCFVYSKISSCIKRRRLVPTPEINNAQAHYLHSS--VIVMGLDGPT 310

Query: 303 IESYPKFVLDESLSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKAS 355
           IESYPK VL ES  LPK ++  C ICL++Y+PKE +++IP CQHCFH  CIDEWL+L  +
Sbjct: 311 IESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGT 370

[Close]

BLAST of CSPI03G26490 vs. TAIR 10
Match: AT2G25410.1 (RING/U-box superfamily protein )

HSP 1 Score: 209.1 bits (531), Expect = 5.7e-54
Identity = 129/370 (34.86%), Postives = 201/370 (54.32%), Query Frame = 0


Query: 1   MILLLLLLFFSFINLATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPT 60
           ++ L+ L FF  +N A+  + C+   C+ +    RFPF + + QP+SCGY GF+L C   
Sbjct: 9   LLNLIFLFFFPLLN-ASEQKPCYSFSCSQESVVARFPFSLFSYQPESCGYSGFNLICKDD 68

Query: 61  GEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFN 120
               L LP S  F+V+ IDY  Q IR+NDP+ CL +++L  + SGSPF    S+   F  
Sbjct: 69  ANTTLKLPKSEPFLVKEIDYETQRIRLNDPENCLARRLLNFDPSGSPFSFLRSRNYTFLI 128

Query: 121 CSSNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSF-------- 180
           C            I CL + + + +      L +M  S+C + K + +P S+        
Sbjct: 129 CPKEANITASFRAIDCLGNTTSSFFVVQFENLGSM-PSSCHIFKILPLPFSWFVAYTTYP 188

Query: 181 --SYSSNLWEYLLLKWENPDCGRCE-SVGQRCEVKSNSSNEIQCTDS--QGRSRVGANVV 240
               S ++W    LKW++PDC  CE     RC  K+N+S++++C  S   G    G  V+
Sbjct: 189 DGQNSRDMW----LKWDSPDCRDCERRTNSRCGFKNNTSHQVECFSSVNPGLHNTGLQVL 248

Query: 241 SI----AMGVVAAVICFLGVLCCLCFKINFRRRGSSSSIVHWTVSSQ---RTRTMGLNGA 300
            I     +G + A+   +G++ C   +++ + + +  + +  +V+SQ       +GL+ +
Sbjct: 249 KIMCLSLVGPLTALTFCVGLVMCSSERVSSQIQQAVVARLSGSVTSQPSNEVARIGLDES 308

Query: 301 TIESYPKFVLDESLSLPKPNNN-VCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLK 350
           TIESY K  L ES  LP  +N+ VCPICL++Y  KE V+ +P C+HCFH  CID WL+L 
Sbjct: 309 TIESYKKVELGESRRLPTGSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLH 368

[Close]

BLAST of CSPI03G26490 vs. TAIR 10
Match: AT2G46495.1 (RING/U-box superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-53
Identity = 129/366 (35.25%), Postives = 194/366 (53.01%), Query Frame = 0


Query: 4   LLLLLFFSFINL-ATSSELCFDSHCTGDYQTIRFPFRIVNGQPKSCGYPGFDLSCHPTGE 63
           L L LFF F  L A+  + C  S C  D   +RFPF +++ QP+ CG+ GF+L C  + +
Sbjct: 7   LFLYLFFLFPLLHASHPQQCSSSSCGRDDVHVRFPFWLLSKQPELCGHAGFNLQCTASPK 66

Query: 64  PLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCS 123
             L LP+SG F+V+ IDY+ Q+IR+ DP+ CL +K+L  ++S SPF      +  F +C 
Sbjct: 67  TALKLPNSGTFLVREIDYLSQQIRLYDPENCLARKLLTFDISRSPFSALYLVSYTFLSCP 126

Query: 124 SNYIPYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVP---------SSFS 183
           +        D I CL + + +  A++S  L      +C ++KT+ VP         S FS
Sbjct: 127 NEVAKSSRFDSIPCLGNSTTSFLATTSLDLAKSMLPSCQIVKTLDVPVSRRVIAKKSRFS 186

Query: 184 YSSN---LWEYLLLKWENPDCGRCESVGQRCEVKSNSSNEIQC--TDSQGRSRVGANVVS 243
              N   LW    LKW++P C  CE    RC  +SN+S +++C   ++ G +     +  
Sbjct: 187 TDVNDKDLW----LKWDSPSCSDCERDFLRCGFRSNTSLQVKCFPFENSGYNTEPQVLKI 246

Query: 244 IAMGVVAAVICFLGVLCC-LCFKINFRRRGSSSSIVHWTVSSQRTRTMGLNGATIESYPK 303
           I + ++  +  F   +   +C    F      +  +     ++   T GL+ + IESY K
Sbjct: 247 ILLSIIGPLTIFATCIAVGVCTSERFASLIQRNVAIAALQPNEVIVTTGLDESIIESYKK 306

Query: 304 FVLDESLSLPKPNNN-VCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCR 353
             L ES  LP  N++ VCPICL++Y  KE V+ IP C HCFH  CID WL++  SCP+CR
Sbjct: 307 TELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCR 366

[Close]

BLAST of CSPI03G26490 vs. TAIR 10
Match: AT2G46494.1 (RING/U-box superfamily protein )

HSP 1 Score: 207.2 bits (526), Expect = 2.2e-53
Identity = 139/367 (37.87%), Postives = 195/367 (53.13%), Query Frame = 0


Query: 1   MILLLLLLFFSF-INLATSSELCFDS----HCTGDYQT-IRFPFRIVNGQPKSCGYPGFD 60
           + LL  LLFF F +  A++   C  S    H  G  +  IRFPF         C +P F+
Sbjct: 7   LFLLFFLLFFIFPLRHASNPSKCSSSNSRPHRCGPLEVPIRFPF---------CDHPLFN 66

Query: 61  LSCHPTGEPLLHLPHSGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQ 120
           L C      +L LP SG F VQ IDY  Q+I INDP+ CL K++L  N+SGSPF  +   
Sbjct: 67  LLCTNLNNTVLQLPMSGTFFVQYIDYRKQQIYINDPENCLAKRLLTFNISGSPFSPRFDT 126

Query: 121 TVAFFNCSSNYI-PYWYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVP--SS 180
              F  C +  + P WY   I CLS+ + + +A+S+  L      +C ++K + VP  S 
Sbjct: 127 LYTFLTCPNELVLPSWY-PSIPCLSNSTSSFFATSNFALAESMLPSCQIVKRIYVPADSP 186

Query: 181 FS---YSSNLWEYLLLKWENPDCGRCESVGQRCEVKSNSSNEIQCTDSQGRSRVGANVVS 240
           F+   +SS L + LLL+W +P+C  CE    RC  K+ +S E++C  ++    +   VV+
Sbjct: 187 FAETRFSSYLNQSLLLEWNSPNCRGCEIDYLRCGFKNKASPEVKCFGAKKSGHLSRAVVA 246

Query: 241 --IAMGVVAAVICFLGVLCCLCFKINF--RRRGSSSSIVHWTVSSQRTRTM---GLNGAT 300
             I + ++ AVI F   + C+  +I+   RRR  +      TV  Q    M   GL+ +T
Sbjct: 247 VLICLSIIGAVILF---VTCIAIRIHNTPRRRHWAVPAAAATVMQQPREVMATRGLDQST 306

Query: 301 IESYPKFVLDESLSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKAS 349
           IE Y    L ES   P  N  VCPICL++Y  KE V+ IP C HCFH  CID WL++  S
Sbjct: 307 IEKYKTMELGESRRPPGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGS 360

[Close]

BLAST of CSPI03G26490 vs. TAIR 10
Match: AT1G28040.1 (RING/U-box superfamily protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.7e-42
Identity = 103/297 (34.68%), Postives = 160/297 (53.87%), Query Frame = 0


Query: 70  SGDFIVQNIDYMHQEIRINDPDYCLPKKILYLNLSGSPFVKKNSQTVAFFNCSSN-YIPY 129
           SG F+V  I+Y  Q+I I+DP+ C+ K++L  N SGSPF    S    F  C +   IP 
Sbjct: 2   SGTFLVDEINYQKQQISISDPENCMVKRLLTFNTSGSPFSYGFSFYYTFLTCPNEVVIPV 61

Query: 130 WYNDPIYCLSSHSHTVYASSSPMLINMFESNCAMIKTVSVPSSFSYSSNLWE-------- 189
           W    I CLS+ + + +A+S+     +   +C ++K + VP    Y   + E        
Sbjct: 62  WSLMSIPCLSNSTSSFFATSNLTFSKLLPPSCQIVKGLYVPVDVIYKDVITEEKGFSTVP 121

Query: 190 ---YLLLKWENPDCGRCESVGQRCEVKSNSSNEIQC---TDSQGRSRVGANVVSIAM--G 249
               +LL+W +P+C  CE    RC  K+ +S E++       + +SR+   ++++ +  G
Sbjct: 122 WLGNVLLEWSSPNCRGCEKESLRCGFKNKASLEVKYLADPPDETKSRLRPLIITLCIIGG 181

Query: 250 VVAAVICFLGVLCCLCFKINFRRRGSSSSIVHWTVSSQR-TRTMGLNGATIESYPKFVLD 309
           + A  I  + +     F +N RR+ ++ +  + T   +    T GL+ +TIESY K  L 
Sbjct: 182 ITATCIAAIRIYNSERF-VNQRRQNAAITARNTTQQPRGVVVTTGLDQSTIESYKKVELG 241

Query: 310 ESLSLPKPNNNVCPICLAQYQPKEIVKSIPNCQHCFHECCIDEWLRLKASCPVCRKS 349
           ES  LP  N  +CPICL++Y  KE V+ +P C HCFH  CIDEWL++ +SCPVCR S
Sbjct: 242 ESRRLPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCRNS 297

The following BLAST results are available for this feature:

BLAST of CSPI03G26490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKK8	8.0e-53	34.86	RING-H2 finger protein ATL22 OS=Arabidopsis thaliana OX=3702 GN=ATL22 PE=2 SV=2	[more]
P0CH01	3.0e-52	35.25	Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana OX=3702 GN=ATL21A...	[more]
P0CH02	3.0e-52	37.87	Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana OX=3702 GN=ATL21B...	[more]
Q9C7E9	2.4e-41	34.68	RING-H2 finger protein ATL20 OS=Arabidopsis thaliana OX=3702 GN=ATL20 PE=2 SV=2	[more]
P0CH03	4.1e-41	33.15	Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana OX=3702 GN=ATL21C...	[more]

BLAST of CSPI03G26490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8U8	3.3e-211	99.44	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G603600 P...	[more]
A0A1S3B3D1	8.6e-183	87.89	putative RING-H2 finger protein ATL21A isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1CJI6	3.5e-128	65.19	putative RING-H2 finger protein ATL21B OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1CJP7	5.0e-114	60.33	putative RING-H2 finger protein ATL21A OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A1S3B3V5	7.2e-113	61.97	RING-H2 finger protein ATL22-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]

BLAST of CSPI03G26490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151260.2	6.9e-211	99.44	putative RING-H2 finger protein ATL21B [Cucumis sativus] >KGN58273.1 hypothetica...	[more]
XP_008441616.1	1.8e-182	87.89	PREDICTED: putative RING-H2 finger protein ATL21A isoform X1 [Cucumis melo]	[more]
XP_038903902.1	2.7e-154	76.06	RING-H2 finger protein ATL22-like [Benincasa hispida]	[more]
XP_022141098.1	7.3e-128	65.19	putative RING-H2 finger protein ATL21B [Momordica charantia]	[more]
XP_022141168.1	1.0e-113	60.33	putative RING-H2 finger protein ATL21A [Momordica charantia]	[more]

BLAST of CSPI03G26490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53110.1	5.1e-71	43.16	RING/U-box superfamily protein	[more]
AT2G25410.1	5.7e-54	34.86	RING/U-box superfamily protein	[more]
AT2G46495.1	2.2e-53	35.25	RING/U-box superfamily protein	[more]
AT2G46494.1	2.2e-53	37.87	RING/U-box superfamily protein	[more]
AT1G28040.1	1.7e-42	34.68	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 304..345 e-value: 1.9E-4 score: 30.8
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 303..346 e-value: 4.2E-10 score: 39.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 304..346 score: 12.135206
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 263..350 e-value: 1.3E-18 score: 68.4
IPR025287	Wall-associated receptor kinase, galacturonan-binding domain	PFAM	PF13947	GUB_WAK_bind	coord: 22..89 e-value: 9.5E-18 score: 64.4
None	No IPR available	PANTHER	PTHR46279	RING/U-BOX SUPERFAMILY PROTEIN	coord: 2..356
None	No IPR available	PANTHER	PTHR46279:SF10	RING/U-BOX SUPERFAMILY PROTEIN	coord: 2..356
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 296..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G26490.1	CSPI03G26490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0030247	polysaccharide binding