CSPI03G26320 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G26320
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 23643289 .. 23643615 (+)
RNA-Seq ExpressionCSPI03G26320
SyntenyCSPI03G26320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGCGAGCAGTTGGGGAGTGGCGAGTGAGTGAAAGAGTGAGCGAAGCGCGGCTTGGAAAGCGAGTGGGGGTTTTCATTTGTAGTAGAGGCGCGGGTGCAGCGCCCCCGATGGATGTACGGACACTGATCTGTGATTGGCAAGTGGGGAAGTTTGGCGCTTCATTTTTATGTGCCAAATTCTGCGATTCCCGCTTCCCAGTTTTTGATCGTCTCCTTCTCCCTCGCCCTTTCGTCCCACGAAGGGGAGACAAAGCCGGTCCACGCTCAAACCTTGGGACCCCACCATTTGAACCGCTATTTCATTTTTTTCAACTTTACATCTAA

mRNA sequence

ATGGCGCGAGCAGTTGGGGAGTGGCGAGTGAGTGAAAGAGTGAGCGAAGCGCGGCTTGGAAAGCGAGTGGGGGTTTTCATTTGTAGTAGAGGCGCGGGTGCAGCGCCCCCGATGGATGTACGGACACTGATCTGTGATTGGCAAGTGGGGAAGTTTGGCGCTTCATTTTTATGTGCCAAATTCTGCGATTCCCGCTTCCCAGTTTTTGATCGTCTCCTTCTCCCTCGCCCTTTCGTCCCACGAAGGGGAGACAAAGCCGGTCCACGCTCAAACCTTGGGACCCCACCATTTGAACCGCTATTTCATTTTTTTCAACTTTACATCTAA

Coding sequence (CDS)

ATGGCGCGAGCAGTTGGGGAGTGGCGAGTGAGTGAAAGAGTGAGCGAAGCGCGGCTTGGAAAGCGAGTGGGGGTTTTCATTTGTAGTAGAGGCGCGGGTGCAGCGCCCCCGATGGATGTACGGACACTGATCTGTGATTGGCAAGTGGGGAAGTTTGGCGCTTCATTTTTATGTGCCAAATTCTGCGATTCCCGCTTCCCAGTTTTTGATCGTCTCCTTCTCCCTCGCCCTTTCGTCCCACGAAGGGGAGACAAAGCCGGTCCACGCTCAAACCTTGGGACCCCACCATTTGAACCGCTATTTCATTTTTTTCAACTTTACATCTAA

Protein sequence

MARAVGEWRVSERVSEARLGKRVGVFICSRGAGAAPPMDVRTLICDWQVGKFGASFLCAKFCDSRFPVFDRLLLPRPFVPRRGDKAGPRSNLGTPPFEPLFHFFQLYI*
Homology
[Close]
BLAST of CSPI03G26320 vs. ExPASy TrEMBL
Match: A0A0A0LDT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G599730 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.8e-58
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MARAVGEWRVSERVSEARLGKRVGVFICSRGAGAAPPMDVRTLICDWQVGKFGASFLCAK 60
           MARAVGEWRVSERVSEARLGKRVGVFICSRGAGAAPPMDVRTLICDWQVGKFGASFLCAK
Sbjct: 1   MARAVGEWRVSERVSEARLGKRVGVFICSRGAGAAPPMDVRTLICDWQVGKFGASFLCAK 60

Query: 61  FCDSRFPVFDRLLLPRPFVPRRGDKAGPRSNLGTPPFEPLFHFFQLYI 109
           FCDSRFPVFDRLLLPRPFVPRRGDKAGPRSNLGTPPFEPLFHFFQLYI
Sbjct: 61  FCDSRFPVFDRLLLPRPFVPRRGDKAGPRSNLGTPPFEPLFHFFQLYI 108

[Close]
BLAST of CSPI03G26320 vs. NCBI nr
Match: KGN58256.1 (hypothetical protein Csa_017415 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MARAVGEWRVSERVSEARLGKRVGVFICSRGAGAAPPMDVRTLICDWQVGKFGASFLCAK 60
           MARAVGEWRVSERVSEARLGKRVGVFICSRGAGAAPPMDVRTLICDWQVGKFGASFLCAK
Sbjct: 1   MARAVGEWRVSERVSEARLGKRVGVFICSRGAGAAPPMDVRTLICDWQVGKFGASFLCAK 60

Query: 61  FCDSRFPVFDRLLLPRPFVPRRGDKAGPRSNLGTPPFEPLFHFFQLYI 109
           FCDSRFPVFDRLLLPRPFVPRRGDKAGPRSNLGTPPFEPLFHFFQLYI
Sbjct: 61  FCDSRFPVFDRLLLPRPFVPRRGDKAGPRSNLGTPPFEPLFHFFQLYI 108

The following BLAST results are available for this feature:
BLAST of CSPI03G26320 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G26320 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LDT25.8e-58100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G599730 PE=4 SV=1[more]
BLAST of CSPI03G26320 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN58256.11.2e-57100.00hypothetical protein Csa_017415 [Cucumis sativus][more]
BLAST of CSPI03G26320 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G26320.1CSPI03G26320.1mRNA