CSPI03G26120 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G26120
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Translocon-associated protein subunit beta
Location	Chr3: 23402520 .. 23404552 (+)
RNA-Seq Expression	CSPI03G26120
Synteny	CSPI03G26120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTGTGTTTGTGTGTTGAGCATAATGACAAGATTACCCCTGTTGAAATTCCTTCCTGGGGGGTTCTAAAAAATCCCCATCATATGTTCTCTTCACCGTTCCACATTTTTGCGTACCTAATTTATCTGACGCCTCCTTCTCCCAAACTCCCTTTCCGATCATCTCTCTCGCCCTAATTCCGACCACTTCATGGCCCCTCCTATGATCCATCTCCTCTTCGCTTTTCTCTTCCTCTCCTCAACCATCGCAACCTCCGATGTTCCCTTCATTGTCGCCCACAAGAAGGCCTCCCTCACCCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGTATGTTCTCTTCCTTTCCTTTAATCTGATTTCTCTTTCCTTTTCTAGATTCACCTTGACTTTCTACTCTCTGCTCCCTCACTTGTAGATCGAATCCTTCTCTGTGCATGTCTGCTTTCATTCATTCTGTTTTGTTCTCGATCTATAATTTGATTTGTTCTTACGTTTTCTCGTACATCAATTTAAGGTTCAGGCGTCGCAAATCTTCTCAATTGTAGAAGAATACACATTTTCATCGATGTGAAATTTGGTGCGTTTGTCTTTTATGAATTGTGGTAAAAGTTCGTAACGTCTTTGGTTAGATCCTCAAGGCTATTATGAACTGGACTCAGGCGTACCTCTCCTAGCTGCATCAATAAATTCTGTATTTTTTTCTTTTTTTAAATGTAAATACCCAAAAAGGATTTACCGGGTCGTTTTATTTTGATGATTGCTGCATTGGCTGTCTTAATAGTTGATCAGCCATGATATTCATTGTCATTCCAGCCTAGATCTTGTTTCACATTAAAATTCTGTTCACTACGTCTGCTATAGTGGCCATGCAACAGGAAGATATAAACTGCTTTTGAGTCAATTTTTCTCAAAAATTTACCCTTTGGTGTACATTGATGGGTGGAGGGTTATGTATGTGATTAAGTGCTAGCTGAATTTTAGAAATTTCTAAACCAAAGTTGAACATGTATCTATTTGACCTATGTGAAGCAAATACTGAGAAGGTTAGAAGAGCATTCATGACGCATGAGATGTTCTTTTGACACATTTCCTTGCTTCTTTTTAAGATAATTAAGAGGGTTTATTAGGAACATTGAAAGGGAGGAGTTGTCTGACTTATACATCTTTTTCTTTTTTATTTATTGATCAGATTTACTATCCCTATCCTGTTACTTTCTTTGGCCTTTGCTTTGTATTGTCCATGAAACAAATTGCCATTCAAATTTGTCTTTTCAACTTTATAAATTATATATATATATCTTATTTCTTCATTTCTTTCGTTGCTTAGATTTTCTGTAGTTTCTTTATCTTATGTTATCTCTAACTAAAGAAGGGAATCCTTTTCATTTTCCTCCCCAACCCTGTTACTTTTGTATATTTTTATTTCTAAATTGCCTGGGTTATAATTTTTCTCCTCTTTTTTGTATTTTCACTTGTAATGATTACAGGACCGCATATGATGTAAGTCTGAATGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCGTAAGTGATTCCTTTTGTAATGTATTATTTCTTATATGCTATGGTTCCCTCCATTGGGTTTTTGTGCTTCTAACACGAATCTGCTGTTTGACAGTGGTGGCCATGTGTCTCATTCATTTGAATTGGAAGCAAAATCAAGAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTACAGGTCAAATGCAATATCCTTTCAATTACGATTATATTCTGGGTTACATAAGGTTGCAGACGTTTTACCATTCATCTTGATATCTGTAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCAGAGAAGAAGTTTGAGTGGGTAAGTTTATCCCCATTCCTTGAATGACTTTTCCATTTCAAGCTTAATGATTTA

mRNA sequence

GTTTGTGTTTGTGTGTTGAGCATAATGACAAGATTACCCCTGTTGAAATTCCTTCCTGGGGGGTTCTAAAAAATCCCCATCATATGTTCTCTTCACCGTTCCACATTTTTGCGTACCTAATTTATCTGACGCCTCCTTCTCCCAAACTCCCTTTCCGATCATCTCTCTCGCCCTAATTCCGACCACTTCATGGCCCCTCCTATGATCCATCTCCTCTTCGCTTTTCTCTTCCTCTCCTCAACCATCGCAACCTCCGATGTTCCCTTCATTGTCGCCCACAAGAAGGCCTCCCTCACCCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGACCGCATATGATGTAAGTCTGAATGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCTGGTGGCCATGTGTCTCATTCATTTGAATTGGAAGCAAAATCAAGAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCAGAGAAGAAGTTTGAGTGGGTAAGTTTATCCCCATTCCTTGAATGACTTTTCCATTTCAAGCTTAATGATTTA

Coding sequence (CDS)

ATGGCCCCTCCTATGATCCATCTCCTCTTCGCTTTTCTCTTCCTCTCCTCAACCATCGCAACCTCCGATGTTCCCTTCATTGTCGCCCACAAGAAGGCCTCCCTCACCCGCCTCAAATCCGGCGCCGAACGCGTCTCTGTCTCAATCGACATTTACAATCAGGGATCTTCGACCGCATATGATGTAAGTCTGAATGATGCAAGCTGGCCAGGAGATATGTTTGATATTGTGAGTGGTGAGACCTCCAACTCGTGGGAAAGACTTGATGCTGGTGGCCATGTGTCTCATTCATTTGAATTGGAAGCAAAATCAAGAGGAATGTTTCATGGTTCACCTGCTGTTATCACATTCCGTGTCCCTACGAAGTCTGCTTTACAGGAGGCCTTATCAACCCCAATTCTACCTTTGGATGTCCTCGCTGACAGGCCACCAGAGAAGAAGTTTGAGTGGGTAAGTTTATCCCCATTCCTTGAATGA

Protein sequence

MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKFEWVSLSPFLE*

Homology

[Close]

BLAST of CSPI03G26120 vs. ExPASy Swiss-Prot
Match: P23438 (Translocon-associated protein subunit beta OS=Canis lupus familiaris OX=9615 GN=SSR2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 35/117 (29.91%), Postives = 59/117 (50.43%), Query Frame = 0


Query: 32  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAG 91
           K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+   
Sbjct: 27  KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86

Query: 92  GHVSHSFELEAKSRGMFHGSPAVITFRVPTKSALQEALSTPILPLDVLADRPPEKKF 149
            +VSH+  L     G F+ + A +T+       +    ++      +LA R  +++F
Sbjct: 87  SNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPVVIGFTSAPGQGGILAQREFDRRF 143

[Close]

BLAST of CSPI03G26120 vs. ExPASy Swiss-Prot
Match: P43308 (Translocon-associated protein subunit beta OS=Homo sapiens OX=9606 GN=SSR2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 32  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAG 91
           K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+   
Sbjct: 27  KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86

Query: 92  GHVSHSFELEAKSRGMFHGSPAVITF 118
            +VSH+  L     G F+ + A IT+
Sbjct: 87  SNVSHTVVLRPLKAGYFNFTSATITY 112

[Close]

BLAST of CSPI03G26120 vs. ExPASy Swiss-Prot
Match: Q9CPW5 (Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 32/86 (37.21%), Postives = 48/86 (55.81%), Query Frame = 0


Query: 32  KASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDASWPGDMFDIVSGETSNSWERLDAG 91
           K+ L R       +++  +IYN GSS A DV L+D S+P + F IVSG  +  W+R+   
Sbjct: 27  KSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDDSFPPEDFGIVSGMLNVKWDRIAPA 86

Query: 92  GHVSHSFELEAKSRGMFHGSPAVITF 118
            +VSH+  L     G F+ + A IT+
Sbjct: 87  SNVSHTVVLRPLKAGYFNFTSATITY 112

[Close]

BLAST of CSPI03G26120 vs. ExPASy Swiss-Prot
Match: Q5E9E4 (Translocon-associated protein subunit beta OS=Bos taurus OX=9913 GN=SSR2 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.7e-07
Identity = 41/141 (29.08%), Postives = 69/141 (48.94%), Query Frame = 0


Query: 8   LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSLNDA 67
           L FA L L +     +   ++A  K+ L R       +++  +IYN GSS A DV L+D 
Sbjct: 4   LAFAVLALFAVTQAEEGARLLA-SKSLLNRYAVEGRDLTLQYNIYNVGSSAALDVELSDD 63

Query: 68  SWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKSALQE 127
           S+P + F IVSG  +  W+R+    +VSH+  L     G F+ + A +T+       +  
Sbjct: 64  SFPPEDFGIVSGMLNVKWDRIAPASNVSHTVVLRPLKAGYFNFTSATVTYLAQEDGPVVI 123

Query: 128 ALSTPILPLDVLADRPPEKKF 149
             ++      +LA R  +++F
Sbjct: 124 GFTSAPGQGGILAQREFDRRF 143

[Close]

BLAST of CSPI03G26120 vs. ExPASy TrEMBL
Match: A0A0A0LBA3 (Translocon-associated protein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G597330 PE=3 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.3e-77
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY 60
           MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY
Sbjct: 1   MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY 60

Query: 61  DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP 120
           DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP
Sbjct: 61  DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP 120

Query: 121 TKSALQEALSTPILPLDVLADRPPEKKFEWV 152
           TKSALQEALSTPILPLDVLADRPPEKKFEWV
Sbjct: 121 TKSALQEALSTPILPLDVLADRPPEKKFEWV 151

[Close]

BLAST of CSPI03G26120 vs. ExPASy TrEMBL
Match: A0A1S3BNZ1 (Translocon-associated protein subunit beta OS=Cucumis melo OX=3656 GN=LOC103491721 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.8e-75
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 3   PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 62
           PP+I LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV
Sbjct: 7   PPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 66

Query: 63  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTK 122
           SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS+GMFHGSPAV+TFRVPTK
Sbjct: 67  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTK 126

Query: 123 SALQEALSTPILPLDVLADRPPEKKFEWV 152
           SALQEALSTPILPLDVLADRPPEKKFEWV
Sbjct: 127 SALQEALSTPILPLDVLADRPPEKKFEWV 155

[Close]

BLAST of CSPI03G26120 vs. ExPASy TrEMBL
Match: A0A5D3DTY4 (Translocon-associated protein subunit beta OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G001090 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.8e-75
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 3   PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 62
           PP+I LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV
Sbjct: 7   PPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 66

Query: 63  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTK 122
           SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS+GMFHGSPAV+TFRVPTK
Sbjct: 67  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTK 126

Query: 123 SALQEALSTPILPLDVLADRPPEKKFEWV 152
           SALQEALSTPILPLDVLADRPPEKKFEWV
Sbjct: 127 SALQEALSTPILPLDVLADRPPEKKFEWV 155

[Close]

BLAST of CSPI03G26120 vs. ExPASy TrEMBL
Match: A0A6J1FAK9 (Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC111442301 PE=3 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 2.8e-69
Identity = 134/147 (91.16%), Postives = 144/147 (97.96%), Query Frame = 0


Query: 5   MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSL 64
           +IHLL AFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGSSTAYDV+L
Sbjct: 9   LIHLLLAFLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGSSTAYDVTL 68

Query: 65  NDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKSA 124
           NDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK++GMFHGSPAVITFRVPTKSA
Sbjct: 69  NDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVITFRVPTKSA 128

Query: 125 LQEALSTPILPLDVLADRPPEKKFEWV 152
           LQEALSTPILPLDVLADRPPEKKFEWV
Sbjct: 129 LQEALSTPILPLDVLADRPPEKKFEWV 155

[Close]

BLAST of CSPI03G26120 vs. ExPASy TrEMBL
Match: A0A6J1J7C6 (Translocon-associated protein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111482040 PE=3 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.4e-68
Identity = 133/147 (90.48%), Postives = 143/147 (97.28%), Query Frame = 0


Query: 5   MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSL 64
           +IHLL A LF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGSSTAYDV+L
Sbjct: 9   LIHLLLALLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGSSTAYDVTL 68

Query: 65  NDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKSA 124
           NDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK++GMFHGSPAVITFRVPTKSA
Sbjct: 69  NDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVITFRVPTKSA 128

Query: 125 LQEALSTPILPLDVLADRPPEKKFEWV 152
           LQEALSTPILPLDVLADRPPEKKFEWV
Sbjct: 129 LQEALSTPILPLDVLADRPPEKKFEWV 155

[Close]

BLAST of CSPI03G26120 vs. NCBI nr
Match: XP_004145695.1 (translocon-associated protein subunit beta [Cucumis sativus] >KGN58234.1 hypothetical protein Csa_017549 [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 2.6e-77
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 1   MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY 60
           MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY
Sbjct: 1   MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY 60

Query: 61  DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP 120
           DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP
Sbjct: 61  DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP 120

Query: 121 TKSALQEALSTPILPLDVLADRPPEKKFEWV 152
           TKSALQEALSTPILPLDVLADRPPEKKFEWV
Sbjct: 121 TKSALQEALSTPILPLDVLADRPPEKKFEWV 151

[Close]

BLAST of CSPI03G26120 vs. NCBI nr
Match: XP_008450004.1 (PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >XP_008450005.1 PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >XP_016900804.1 PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >KAA0037850.1 translocon-associated protein subunit beta [Cucumis melo var. makuwa] >TYK27227.1 translocon-associated protein subunit beta [Cucumis melo var. makuwa])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 0


Query: 3   PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 62
           PP+I LLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV
Sbjct: 7   PPLIRLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 66

Query: 63  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTK 122
           SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKS+GMFHGSPAV+TFRVPTK
Sbjct: 67  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSKGMFHGSPAVVTFRVPTK 126

Query: 123 SALQEALSTPILPLDVLADRPPEKKFEWV 152
           SALQEALSTPILPLDVLADRPPEKKFEWV
Sbjct: 127 SALQEALSTPILPLDVLADRPPEKKFEWV 155

[Close]

BLAST of CSPI03G26120 vs. NCBI nr
Match: XP_023528715.1 (translocon-associated protein subunit beta [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.2 bits (692), Expect = 5.8e-69
Identity = 134/147 (91.16%), Postives = 144/147 (97.96%), Query Frame = 0


Query: 5   MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSL 64
           +IHLL AFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGSSTAYDV+L
Sbjct: 4   LIHLLLAFLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGSSTAYDVTL 63

Query: 65  NDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKSA 124
           NDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK++GMFHGSPAVITFRVPTKSA
Sbjct: 64  NDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVITFRVPTKSA 123

Query: 125 LQEALSTPILPLDVLADRPPEKKFEWV 152
           LQEALSTPILPLDVLADRPPEKKFEWV
Sbjct: 124 LQEALSTPILPLDVLADRPPEKKFEWV 150

[Close]

BLAST of CSPI03G26120 vs. NCBI nr
Match: XP_022935419.1 (translocon-associated protein subunit beta isoform X1 [Cucurbita moschata] >XP_022935420.1 translocon-associated protein subunit beta isoform X2 [Cucurbita moschata])

HSP 1 Score: 271.2 bits (692), Expect = 5.8e-69
Identity = 134/147 (91.16%), Postives = 144/147 (97.96%), Query Frame = 0


Query: 5   MIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDVSL 64
           +IHLL AFLF+SSTIA+SDVPFIVAHKKA+LTRLKSG ERVSVSI+IYNQGSSTAYDV+L
Sbjct: 9   LIHLLLAFLFVSSTIASSDVPFIVAHKKATLTRLKSGVERVSVSIEIYNQGSSTAYDVTL 68

Query: 65  NDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTKSA 124
           NDASWPGD+FDIVSGETS SWERLDAGGH+SHSFELEAK++GMFHGSPAVITFRVPTKSA
Sbjct: 69  NDASWPGDVFDIVSGETSKSWERLDAGGHLSHSFELEAKTKGMFHGSPAVITFRVPTKSA 128

Query: 125 LQEALSTPILPLDVLADRPPEKKFEWV 152
           LQEALSTPILPLDVLADRPPEKKFEWV
Sbjct: 129 LQEALSTPILPLDVLADRPPEKKFEWV 155

[Close]

BLAST of CSPI03G26120 vs. NCBI nr
Match: XP_038894726.1 (translocon-associated protein subunit beta [Benincasa hispida])

HSP 1 Score: 270.8 bits (691), Expect = 7.6e-69
Identity = 132/149 (88.59%), Postives = 142/149 (95.30%), Query Frame = 0


Query: 3   PPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAYDV 62
           PP+IHLL A LF+SSTIATSDVPFIVAHKKASLTRLKSG ERVSVSIDIYN+GSSTAYD 
Sbjct: 7   PPLIHLLLALLFVSSTIATSDVPFIVAHKKASLTRLKSGVERVSVSIDIYNRGSSTAYDA 66

Query: 63  SLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVPTK 122
           SLNDASWP DMFDIVSGETS SWERLDAGGH+SHSFELEAK++G+FHGSPA+ITFRVPTK
Sbjct: 67  SLNDASWPEDMFDIVSGETSKSWERLDAGGHISHSFELEAKTKGLFHGSPAIITFRVPTK 126

Query: 123 SALQEALSTPILPLDVLADRPPEKKFEWV 152
           SALQEALSTPILPLD+LAD+PPEKK EWV
Sbjct: 127 SALQEALSTPILPLDILADKPPEKKLEWV 155

[Close]

BLAST of CSPI03G26120 vs. TAIR 10
Match: AT5G14030.1 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.6e-51
Identity = 96/149 (64.43%), Postives = 122/149 (81.88%), Query Frame = 0


Query: 1   MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY 60
           +A  +I  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AY
Sbjct: 5   VAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAY 64

Query: 61  DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP 120
           DV+L D SW    F++V+G TS SWERLDAGG +SHS ELEAK +G+F+G+PAV+TFR+P
Sbjct: 65  DVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIP 124

Query: 121 TKSALQEALSTPILPLDVLADRPPEKKFE 150
           TK ALQEA STP+LPLD+LAD+PP K  +
Sbjct: 125 TKPALQEAYSTPLLPLDILADKPPTKPLD 153

[Close]

BLAST of CSPI03G26120 vs. TAIR 10
Match: AT5G14030.2 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.6e-51
Identity = 96/149 (64.43%), Postives = 122/149 (81.88%), Query Frame = 0


Query: 1   MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY 60
           +A  +I  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AY
Sbjct: 5   VAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAY 64

Query: 61  DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP 120
           DV+L D SW    F++V+G TS SWERLDAGG +SHS ELEAK +G+F+G+PAV+TFR+P
Sbjct: 65  DVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIP 124

Query: 121 TKSALQEALSTPILPLDVLADRPPEKKFE 150
           TK ALQEA STP+LPLD+LAD+PP K  +
Sbjct: 125 TKPALQEAYSTPLLPLDILADKPPTKPLD 153

[Close]

BLAST of CSPI03G26120 vs. TAIR 10
Match: AT5G14030.3 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.6e-51
Identity = 96/149 (64.43%), Postives = 122/149 (81.88%), Query Frame = 0


Query: 1   MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY 60
           +A  +I  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AY
Sbjct: 5   VAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAY 64

Query: 61  DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP 120
           DV+L D SW    F++V+G TS SWERLDAGG +SHS ELEAK +G+F+G+PAV+TFR+P
Sbjct: 65  DVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIP 124

Query: 121 TKSALQEALSTPILPLDVLADRPPEKKFE 150
           TK ALQEA STP+LPLD+LAD+PP K  +
Sbjct: 125 TKPALQEAYSTPLLPLDILADKPPTKPLD 153

[Close]

BLAST of CSPI03G26120 vs. TAIR 10
Match: AT5G14030.4 (translocon-associated protein beta (TRAPB) family protein )

HSP 1 Score: 197.6 bits (501), Expect = 7.6e-51
Identity = 96/149 (64.43%), Postives = 122/149 (81.88%), Query Frame = 0


Query: 1   MAPPMIHLLFAFLFLSSTIATSDVPFIVAHKKASLTRLKSGAERVSVSIDIYNQGSSTAY 60
           +A  +I  +  F+ +S++ ATS+VPF+V HKKA+L RLKSGAERVSVS DIYNQGSS+AY
Sbjct: 5   VAKLLISAMAVFMLVSASFATSEVPFMVVHKKATLNRLKSGAERVSVSYDIYNQGSSSAY 64

Query: 61  DVSLNDASWPGDMFDIVSGETSNSWERLDAGGHVSHSFELEAKSRGMFHGSPAVITFRVP 120
           DV+L D SW    F++V+G TS SWERLDAGG +SHS ELEAK +G+F+G+PAV+TFR+P
Sbjct: 65  DVTLTDNSWDKKTFEVVNGNTSKSWERLDAGGILSHSIELEAKVKGVFYGAPAVVTFRIP 124

Query: 121 TKSALQEALSTPILPLDVLADRPPEKKFE 150
           TK ALQEA STP+LPLD+LAD+PP K  +
Sbjct: 125 TKPALQEAYSTPLLPLDILADKPPTKPLD 153

The following BLAST results are available for this feature:

BLAST of CSPI03G26120 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23438	1.0e-07	29.91	Translocon-associated protein subunit beta OS=Canis lupus familiaris OX=9615 GN=...	[more]
P43308	1.0e-07	37.21	Translocon-associated protein subunit beta OS=Homo sapiens OX=9606 GN=SSR2 PE=1 ...	[more]
Q9CPW5	1.0e-07	37.21	Translocon-associated protein subunit beta OS=Mus musculus OX=10090 GN=Ssr2 PE=1...	[more]
Q5E9E4	1.7e-07	29.08	Translocon-associated protein subunit beta OS=Bos taurus OX=9913 GN=SSR2 PE=2 SV...	[more]

BLAST of CSPI03G26120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBA3	1.3e-77	100.00	Translocon-associated protein subunit beta OS=Cucumis sativus OX=3659 GN=Csa_3G5...	[more]
A0A1S3BNZ1	5.8e-75	97.32	Translocon-associated protein subunit beta OS=Cucumis melo OX=3656 GN=LOC1034917...	[more]
A0A5D3DTY4	5.8e-75	97.32	Translocon-associated protein subunit beta OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1FAK9	2.8e-69	91.16	Translocon-associated protein subunit beta OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1J7C6	1.4e-68	90.48	Translocon-associated protein subunit beta OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CSPI03G26120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145695.1	2.6e-77	100.00	translocon-associated protein subunit beta [Cucumis sativus] >KGN58234.1 hypothe...	[more]
XP_008450004.1	1.2e-74	97.32	PREDICTED: translocon-associated protein subunit beta [Cucumis melo] >XP_0084500...	[more]
XP_023528715.1	5.8e-69	91.16	translocon-associated protein subunit beta [Cucurbita pepo subsp. pepo]	[more]
XP_022935419.1	5.8e-69	91.16	translocon-associated protein subunit beta isoform X1 [Cucurbita moschata] >XP_0...	[more]
XP_038894726.1	7.6e-69	88.59	translocon-associated protein subunit beta [Benincasa hispida]	[more]

BLAST of CSPI03G26120 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14030.1	7.6e-51	64.43	translocon-associated protein beta (TRAPB) family protein	[more]
AT5G14030.2	7.6e-51	64.43	translocon-associated protein beta (TRAPB) family protein	[more]
AT5G14030.3	7.6e-51	64.43	translocon-associated protein beta (TRAPB) family protein	[more]
AT5G14030.4	7.6e-51	64.43	translocon-associated protein beta (TRAPB) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05753	TRAP_beta	coord: 12..151 e-value: 1.0E-46 score: 158.6
None	No IPR available	PANTHER	PTHR12861	TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT	coord: 16..152
None	No IPR available	PANTHER	PTHR12861:SF6	TRANSLOCON-ASSOCIATED PROTEIN BETA (TRAPB) FAMILY PROTEIN	coord: 16..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G26120.1	CSPI03G26120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane