CSPI03G26080 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTGTCAGCTAGGGCACATGGAGCAACAACTTGAGGAAGTTCTTGATTCTGTACTATCAAATTTCAGGTATGGCATCAAGTCGTAGTGAGAGAATTAGAGACAGAGGGAGGGAGGAAAAAACAGACGATTTTAGACATATCATGGCGGTGTCCCAGCATGTTATAAATTGTAACTTTGAAGCCAGCTTACCTTTATTCCTCTTGTGAGAATATATTGTGCTTGAATAATGTAGTCAATCACTATATTGCCTCTCTGGTTCTTTTTATTATATACAAAATTTGGTAAATCTGCTAAACTTTTTTCTGTTCAGAAATTTTGTAAAAGTATCAACTTGGACGTTTTTTTTTTATTAAATGGGTACCAGGAACCAACTGTTTATCTTCCAGACTATATTTATCTTTAAGTGGCCCAAATGAGTCATTAACTTTCTTTTTTTATCTACCTAGTTAATTATTAGCTTTCATTTCAGGCCTATGACCTTCAAGGAAAAAGAAGAGCTTCAGAAATTGATTCAGAAGCTTCCACCAGAAAATATCAGGCGTGTTGCAGAAATTGTCATCCAACATAGGACCGATAAAACAGATCTGTCTGGTGAAATCCATATTGGTTTGGATAAAGAGGTGAGTGAAGCAGCGCAGTAATATGCATGGAATAGTTAACATAGACTGAATCTATTTACTTATTTATTTTGCAGAATAACACTACTCTCTGGAGATTGTATTACTATGTCGAAGCAGTTGAGAAAGCAAAGAAGCTGGCATCAAAATGACTGTTCATCAACTATCTACCTATCTGAGATGGATGACTTCATCATTTTTTTTTCGAGGGT ATGGATTGTCAGCTAGGGCACATGGAGCAACAACTTGAGGAAGTTCTTGATTCTGTACTATCAAATTTCAGGCCTATGACCTTCAAGGAAAAAGAAGAGCTTCAGAAATTGATTCAGAAGCTTCCACCAGAAAATATCAGGCGTGTTGCAGAAATTGTCATCCAACATAGGACCGATAAAACAGATCTGTCTGGTGAAATCCATATTGGTTTGGATAAAGAGAATAACACTACTCTCTGGAGATTGTATTACTATGTCGAAGCAGTTGAGAAAGCAAAGAAGCTGGCATCAAAATGACTGTTCATCAACTATCTACCTATCTGAGATGGATGACTTCATCATTTTTTTTTCGAGGGT ATGGATTGTCAGCTAGGGCACATGGAGCAACAACTTGAGGAAGTTCTTGATTCTGTACTATCAAATTTCAGGCCTATGACCTTCAAGGAAAAAGAAGAGCTTCAGAAATTGATTCAGAAGCTTCCACCAGAAAATATCAGGCGTGTTGCAGAAATTGTCATCCAACATAGGACCGATAAAACAGATCTGTCTGGTGAAATCCATATTGGTTTGGATAAAGAGAATAACACTACTCTCTGGAGATTGTATTACTATGTCGAAGCAGTTGAGAAAGCAAAGAAGCTGGCATCAAAATGA MDCQLGHMEQQLEEVLDSVLSNFRPMTFKEKEELQKLIQKLPPENIRRVAEIVIQHRTDKTDLSGEIHIGLDKENNTTLWRLYYYVEAVEKAKKLASK* Homology
BLAST of CSPI03G26080 vs. ExPASy Swiss-Prot
Match: Q9FT54 (Transcription factor GTE6 OS=Arabidopsis thaliana OX=3702 GN=GTE6 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 5.0e-05 Identity = 27/92 (29.35%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of CSPI03G26080 vs. ExPASy Swiss-Prot
Match: Q84XV2 (Transcription factor GTE1 OS=Arabidopsis thaliana OX=3702 GN=GTE1 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 8.5e-05 Identity = 25/94 (26.60%), Postives = 53/94 (56.38%), Query Frame = 0
BLAST of CSPI03G26080 vs. ExPASy TrEMBL
Match: A0A1S3BNY6 (uncharacterized protein LOC103491717 OS=Cucumis melo OX=3656 GN=LOC103491717 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of CSPI03G26080 vs. ExPASy TrEMBL
Match: A0A5D3DUN6 (NET domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold236G00980 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 6.3e-35 Identity = 79/90 (87.78%), Postives = 82/90 (91.11%), Query Frame = 0
BLAST of CSPI03G26080 vs. ExPASy TrEMBL
Match: A0A6J1JG61 (bromodomain-containing protein 4A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111486618 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32 Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of CSPI03G26080 vs. ExPASy TrEMBL
Match: A0A6J1JMP5 (bromodomain-containing protein 4A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111486618 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 1.3e-32 Identity = 76/95 (80.00%), Postives = 85/95 (89.47%), Query Frame = 0
BLAST of CSPI03G26080 vs. ExPASy TrEMBL
Match: A0A6J1DGV0 (uncharacterized protein LOC111019964 OS=Momordica charantia OX=3673 GN=LOC111019964 PE=4 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 2.2e-32 Identity = 76/93 (81.72%), Postives = 83/93 (89.25%), Query Frame = 0
BLAST of CSPI03G26080 vs. NCBI nr
Match: XP_031737663.1 (uncharacterized protein LOC101211269 isoform X2 [Cucumis sativus]) HSP 1 Score: 186.8 bits (473), Expect = 9.0e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CSPI03G26080 vs. NCBI nr
Match: XP_011651583.1 (uncharacterized protein LOC101211269 isoform X1 [Cucumis sativus] >KAE8650792.1 hypothetical protein Csa_017467 [Cucumis sativus]) HSP 1 Score: 186.8 bits (473), Expect = 9.0e-44 Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CSPI03G26080 vs. NCBI nr
Match: XP_008450000.1 (PREDICTED: uncharacterized protein LOC103491717 [Cucumis melo]) HSP 1 Score: 174.1 bits (440), Expect = 6.0e-40 Identity = 88/94 (93.62%), Postives = 90/94 (95.74%), Query Frame = 0
BLAST of CSPI03G26080 vs. NCBI nr
Match: KAA0037843.1 (uncharacterized protein E6C27_scaffold113G00300 [Cucumis melo var. makuwa] >TYK27222.1 uncharacterized protein E5676_scaffold236G00980 [Cucumis melo var. makuwa]) HSP 1 Score: 156.4 bits (394), Expect = 1.3e-34 Identity = 79/90 (87.78%), Postives = 82/90 (91.11%), Query Frame = 0
BLAST of CSPI03G26080 vs. NCBI nr
Match: XP_038893528.1 (uncharacterized protein LOC120082425 isoform X2 [Benincasa hispida]) HSP 1 Score: 154.8 bits (390), Expect = 3.8e-34 Identity = 77/93 (82.80%), Postives = 85/93 (91.40%), Query Frame = 0
BLAST of CSPI03G26080 vs. TAIR 10
Match: AT3G27420.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G40600.1); Has 43 Blast hits to 43 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 73.6 bits (179), Expect = 1.0e-13 Identity = 39/91 (42.86%), Postives = 60/91 (65.93%), Query Frame = 0
BLAST of CSPI03G26080 vs. TAIR 10
Match: AT5G40600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 73.2 bits (178), Expect = 1.3e-13 Identity = 40/96 (41.67%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of CSPI03G26080 vs. TAIR 10
Match: AT3G52280.1 (general transcription factor group E6 ) HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06 Identity = 27/92 (29.35%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of CSPI03G26080 vs. TAIR 10
Match: AT3G52280.2 (general transcription factor group E6 ) HSP 1 Score: 48.5 bits (114), Expect = 3.5e-06 Identity = 27/92 (29.35%), Postives = 52/92 (56.52%), Query Frame = 0
BLAST of CSPI03G26080 vs. TAIR 10
Match: AT2G34900.2 (Transcription factor GTE6 ) HSP 1 Score: 47.8 bits (112), Expect = 6.1e-06 Identity = 25/94 (26.60%), Postives = 53/94 (56.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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