CSPI03G26070 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G26070
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 23370074 .. 23370265 (+)
RNA-Seq ExpressionCSPI03G26070
SyntenyCSPI03G26070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAACTTAGGGTGGAGCAGTAGAGGTAGACGACACTCGACAGAAGTGGACGAAACACAAATGCAACGATTGATTCGACTCCTCATCTTCGACTCTCCTCAGTCCTCACTCCGTTCAACGTCCACAGCGACTCCTCGTCTCCTTAGTCCTCATTTCGCTCGGCGCTCAGTACTATTGCGTTTGAAGTTT

mRNA sequence

ATGTATAACTTAGGGTGGAGCAGTAGAGGTAGACGACACTCGACAGAAGTGGACGAAACACAAATGCAACGATTGATTCGACTCCTCATCTTCGACTCTCCTCAGTCCTCACTCCGTTCAACGTCCACAGCGACTCCTCGTCTCCTTAGTCCTCATTTCGCTCGGCGCTCAGTACTATTGCGTTTGAAGTTT

Coding sequence (CDS)

ATGTATAACTTAGGGTGGAGCAGTAGAGGTAGACGACACTCGACAGAAGTGGACGAAACACAAATGCAACGATTGATTCGACTCCTCATCTTCGACTCTCCTCAGTCCTCACTCCGTTCAACGTCCACAGCGACTCCTCGTCTCCTTAGTCCTCATTTCGCTCGGCGCTCAGTACTATTGCGTTTGAAGTTT

Protein sequence

MYNLGWSSRGRRHSTEVDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPHFARRSVLLRLKF
Homology
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BLAST of CSPI03G26070 vs. ExPASy TrEMBL
Match: A0A0A0L8R5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597270 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-09
Identity = 39/48 (81.25%), Postives = 40/48 (83.33%), Query Frame = 0 

Query: 17 VDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPHFARRSVLLRLKF 65
          VDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPH    S L  + F
Sbjct: 7  VDETQMQRLIRLLIFDSPQSSLRSTSTATPRLLSPHIFTDSSLKFVDF 54

The following BLAST results are available for this feature:
BLAST of CSPI03G26070 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G26070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L8R51.7e-0981.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G597270 PE=4 SV=1[more]
BLAST of CSPI03G26070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of CSPI03G26070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G26070.1CSPI03G26070.1mRNA