CSPI03G25970 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G25970
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	class I heat shock protein-like
Location	Chr3: 23279619 .. 23280376 (+)
RNA-Seq Expression	CSPI03G25970
Synteny	CSPI03G25970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATCTCTCTATCTTCATTGGAAACATGTCTTTGATTCTCCACGAAATCTTCGATCCATTTCTTTCTATGATTAACCAATGTCCTGTTTTAAATACCCCCACTGACTGGAAAGAGACTCCGGCTGCTCACATCTTCATCGCGGATTTGCCCGGGTTGAAGAAAGATCAGGTAAGACGACATAGCCATTTGCGACCATCACTTTCTAGCATGTTGTTAAATATTATACAAAATATATATCGCTAAATTTTTAATTATATGTTTTCAAAATTAAGGTCAATAAGTTGTAAAAATTAAAAACCGAAAAAGTAAAATGATAATCTTTTCAAATGGAGCTTAAATTTTAAAGATATGTTCCATTCAAATTGATTGGTGATCCATGAACTTTCAAAATTTCGAGTTCCTGAAACTCGAGTGTGTACCAAAACCCATTTTGTTAATGGCCTTGTTTGGATCTCGGTCGAGTAGGTCAAGGTAGAGGTGATGGAGGATGGTGATGGACGGCTGCTGCAGATAAGCGGAGATAGAGGAGACGACGCTACTGCCGGTAATGACAAGAAAAACGATGAGAGTAGTGGTCATAAATGGCGTCGTGTGGAGCGTTGCCGGGGGAAATTCTGCAGGAGGTTCCGACTGCCGGGGAATGTGAAGGCGGATGAAGTGAGGGCGGCGATGGAGAACGGAGTTTTGAGAGTGACGGTGCCAAAAGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATCGAGATTGAAACACTGTAG

mRNA sequence

CACATCTCTCTATCTTCATTGGAAACATGTCTTTGATTCTCCACGAAATCTTCGATCCATTTCTTTCTATGATTAACCAATGTCCTGTTTTAAATACCCCCACTGACTGGAAAGAGACTCCGGCTGCTCACATCTTCATCGCGGATTTGCCCGGGTTGAAGAAAGATCAGGTCAAGGTAGAGGTGATGGAGGATGGTGATGGACGGCTGCTGCAGATAAGCGGAGATAGAGGAGACGACGCTACTGCCGGTAATGACAAGAAAAACGATGAGAGTAGTGGTCATAAATGGCGTCGTGTGGAGCGTTGCCGGGGGAAATTCTGCAGGAGGTTCCGACTGCCGGGGAATGTGAAGGCGGATGAAGTGAGGGCGGCGATGGAGAACGGAGTTTTGAGAGTGACGGTGCCAAAAGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATCGAGATTGAAACACTGTAG

Coding sequence (CDS)

ATGTCTTTGATTCTCCACGAAATCTTCGATCCATTTCTTTCTATGATTAACCAATGTCCTGTTTTAAATACCCCCACTGACTGGAAAGAGACTCCGGCTGCTCACATCTTCATCGCGGATTTGCCCGGGTTGAAGAAAGATCAGGTCAAGGTAGAGGTGATGGAGGATGGTGATGGACGGCTGCTGCAGATAAGCGGAGATAGAGGAGACGACGCTACTGCCGGTAATGACAAGAAAAACGATGAGAGTAGTGGTCATAAATGGCGTCGTGTGGAGCGTTGCCGGGGGAAATTCTGCAGGAGGTTCCGACTGCCGGGGAATGTGAAGGCGGATGAAGTGAGGGCGGCGATGGAGAACGGAGTTTTGAGAGTGACGGTGCCAAAAGAGGAAGTGAAGAAGCCGGAGAAGAAGGTGATCGAGATTGAAACACTGTAG

Protein sequence

MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEIETL*

Homology

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BLAST of CSPI03G25970 vs. ExPASy Swiss-Prot
Match: P30221 (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-31
Identity = 79/142 (55.63%), Postives = 94/142 (66.20%), Query Frame = 0


Query: 7   EIFDPFLSM-------INQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDG 66
           ++FDPF  +              NT  DWKETP  H+F  DLPGLKK++VKVEV ED   
Sbjct: 23  DVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVFKVDLPGLKKEEVKVEVEED--- 82

Query: 67  RLLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMEN 126
           R+LQISG+R       N +K D++   KW R+ER  GKF RRFRLP N K D+V+A+MEN
Sbjct: 83  RVLQISGER-------NVEKEDKND--KWHRMERSSGKFMRRFRLPENAKMDQVKASMEN 142

Query: 127 GVLRVTVPKEEVKKPEKKVIEI 142
           GVL VTVPKEEVKKPE K IEI
Sbjct: 143 GVLTVTVPKEEVKKPEVKSIEI 152

[Close]

BLAST of CSPI03G25970 vs. ExPASy Swiss-Prot
Match: O82011 (17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-31
Identity = 79/142 (55.63%), Postives = 96/142 (67.61%), Query Frame = 0


Query: 7   EIFDPFLSM-------INQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDG 66
           ++FDPF  +              NT  DWKETP AH+F ADLPGLK ++VKVEV ED   
Sbjct: 23  DVFDPFRELGFPGTNSGETSAFANTRIDWKETPEAHVFKADLPGLKLEEVKVEVEED--- 82

Query: 67  RLLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMEN 126
           R+LQISG+R       N +K D++   KW+RVER  GKF RRFRLP N K D+V+A+MEN
Sbjct: 83  RVLQISGER-------NMEKEDKND--KWQRVERSSGKFMRRFRLPENAKMDQVKASMEN 142

Query: 127 GVLRVTVPKEEVKKPEKKVIEI 142
           GVL VTVPKEE+KKP+ K IEI
Sbjct: 143 GVLTVTVPKEEMKKPDVKSIEI 152

[Close]

BLAST of CSPI03G25970 vs. ExPASy Swiss-Prot
Match: P27879 (18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP18.1 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.5e-31
Identity = 74/122 (60.66%), Postives = 90/122 (73.77%), Query Frame = 0


Query: 22  LNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKND 81
           ++T  DWKETP AH+F ADLPGLKK++VKVE+ +D   R+LQISG+R  +     + KND
Sbjct: 34  VSTRIDWKETPEAHVFKADLPGLKKEEVKVEIEDD---RVLQISGERNVE----KEDKND 93

Query: 82  ESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 141
           +     W RVER  GKF RRFRLP N K D+V+AAMENGVL VTVPKEE+KKPE K IEI
Sbjct: 94  Q-----WHRVERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEIKKPEVKSIEI 143

Query: 142 ET 144
            +
Sbjct: 154 SS 143

[Close]

BLAST of CSPI03G25970 vs. ExPASy Swiss-Prot
Match: P27880 (18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 5.9e-31
Identity = 72/120 (60.00%), Postives = 89/120 (74.17%), Query Frame = 0


Query: 22  LNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKND 81
           ++T  DWKETP AH+F ADLPG+KK++VKVE+ +D   R+LQISG+R    +   + KND
Sbjct: 49  VSTRVDWKETPEAHVFKADLPGMKKEEVKVEIEDD---RVLQISGER----SVEKEDKND 108

Query: 82  ESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 141
           +     W R+ER  GKF RRFRLP N K D+V+AAMENGVL VTVPKEEVKKPE K I+I
Sbjct: 109 Q-----WHRLERSSGKFMRRFRLPENAKMDQVKAAMENGVLTVTVPKEEVKKPEVKTIDI 156

[Close]

BLAST of CSPI03G25970 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.0e-30
Identity = 73/120 (60.83%), Postives = 88/120 (73.33%), Query Frame = 0


Query: 22  LNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKND 81
           +NT  DWKETP AH+F ADLPGLKK++VKVE+ E   G++LQISG+R  +     ++KND
Sbjct: 48  VNTHIDWKETPQAHVFKADLPGLKKEEVKVELEE---GKVLQISGERNKE----KEEKND 107

Query: 82  ESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 141
                KW RVER  GKF RRFRLP N K DEV+AAM NGV+ VTVPK E+KKPE K I+I
Sbjct: 108 -----KWHRVERSSGKFLRRFRLPENAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDI 155

[Close]

BLAST of CSPI03G25970 vs. ExPASy TrEMBL
Match: A0A0A0L8Q9 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595190 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG
Sbjct: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKEEVKKPEKKVIEIETL
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIETL 144

[Close]

BLAST of CSPI03G25970 vs. ExPASy TrEMBL
Match: A0A1S3BNE8 (class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103491749 PE=3 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.0e-70
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLIL+EIFDPFLSMINQCPVLNTPTDWKETPAAH+FIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILNEIFDPFLSMINQCPVLNTPTDWKETPAAHVFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATA ND KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEV AAMENG
Sbjct: 61  LLQISGDRGDDATAAND-KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVSAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKEEVKKPEKKVIEIE L
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIEGL 143

[Close]

BLAST of CSPI03G25970 vs. ExPASy TrEMBL
Match: A0A5A7VF09 (Class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold595G00670 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.0e-69
Identity = 137/144 (95.14%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLIL+EIFDPFLSMINQCPVLNTPTDWKETPAAH+FIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILNEIFDPFLSMINQCPVLNTPTDWKETPAAHVFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATA ND KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEV AAMENG
Sbjct: 61  LLQISGDRGDDATAAND-KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVSAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKE VKKPEKKVIEIE L
Sbjct: 121 VLRVTVPKEGVKKPEKKVIEIEGL 143

[Close]

BLAST of CSPI03G25970 vs. ExPASy TrEMBL
Match: A0A4U5Q7Y7 (18.1 kDa class I heat shock protein-like OS=Populus alba OX=43335 GN=D5086_0000128400 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 6.1e-47
Identity = 100/138 (72.46%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 7   EIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISG 66
           EIFDPFLSMIN+CPVLNTPTDWKETP AHIF++DLPGLKK+QV VEV++  +G++LQISG
Sbjct: 11  EIFDPFLSMINKCPVLNTPTDWKETPDAHIFVSDLPGLKKEQVTVEVVD--EGKVLQISG 70

Query: 67  DRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTV 126
           DR ++  +  D KND     KW  VERCRGKF RRFRLPGN K+DEV+A+MENGVL VTV
Sbjct: 71  DRKNEEIS-EDNKND-----KWHHVERCRGKFLRRFRLPGNAKSDEVKASMENGVLVVTV 130

Query: 127 PKEEVKKPEKKVIEIETL 145
           PK+EVKKPEKKVIEIE +
Sbjct: 131 PKQEVKKPEKKVIEIEEI 140

[Close]

BLAST of CSPI03G25970 vs. ExPASy TrEMBL
Match: A0A6M2F427 (SHSP domain-containing protein OS=Populus davidiana OX=266767 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.4e-46
Identity = 99/138 (71.74%), Postives = 117/138 (84.78%), Query Frame = 0


Query: 7   EIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISG 66
           EIFDPFLSMIN+CPVLNTPTDWKETP AHIF++DLPGLKK++V VEV++  +G++LQISG
Sbjct: 11  EIFDPFLSMINKCPVLNTPTDWKETPDAHIFVSDLPGLKKEEVTVEVVD--EGKVLQISG 70

Query: 67  DRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTV 126
           DR ++  +  D KND     KW  VERCRGKF RRFRLPGN K+DEV+A+MENGVL VTV
Sbjct: 71  DRKNEEIS-EDNKND-----KWHHVERCRGKFLRRFRLPGNAKSDEVKASMENGVLVVTV 130

Query: 127 PKEEVKKPEKKVIEIETL 145
           PK+EVKKPEKKVIEIE +
Sbjct: 131 PKQEVKKPEKKVIEIEEI 140

[Close]

BLAST of CSPI03G25970 vs. NCBI nr
Match: XP_004145723.1 (class I heat shock protein [Cucumis sativus] >KGN58218.1 hypothetical protein Csa_017596 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 4.9e-75
Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG
Sbjct: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKEEVKKPEKKVIEIETL
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIETL 144

[Close]

BLAST of CSPI03G25970 vs. NCBI nr
Match: XP_008450042.1 (PREDICTED: class I heat shock protein-like [Cucumis melo])

HSP 1 Score: 274.2 bits (700), Expect = 6.3e-70
Identity = 138/144 (95.83%), Postives = 140/144 (97.22%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLIL+EIFDPFLSMINQCPVLNTPTDWKETPAAH+FIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILNEIFDPFLSMINQCPVLNTPTDWKETPAAHVFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATA ND KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEV AAMENG
Sbjct: 61  LLQISGDRGDDATAAND-KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVSAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKEEVKKPEKKVIEIE L
Sbjct: 121 VLRVTVPKEEVKKPEKKVIEIEGL 143

[Close]

BLAST of CSPI03G25970 vs. NCBI nr
Match: KAA0066962.1 (class I heat shock protein-like [Cucumis melo var. makuwa] >TYK30241.1 class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 271.6 bits (693), Expect = 4.1e-69
Identity = 137/144 (95.14%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLIL+EIFDPFLSMINQCPVLNTPTDWKETPAAH+FIADLPGLKKDQVKVEVMEDGDGR
Sbjct: 1   MSLILNEIFDPFLSMINQCPVLNTPTDWKETPAAHVFIADLPGLKKDQVKVEVMEDGDGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDRGDDATA ND KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEV AAMENG
Sbjct: 61  LLQISGDRGDDATAAND-KNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVSAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           VLRVTVPKE VKKPEKKVIEIE L
Sbjct: 121 VLRVTVPKEGVKKPEKKVIEIEGL 143

[Close]

BLAST of CSPI03G25970 vs. NCBI nr
Match: XP_038875560.1 (class I heat shock protein-like [Benincasa hispida])

HSP 1 Score: 243.0 bits (619), Expect = 1.5e-60
Identity = 124/144 (86.11%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MSLILHEIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 60
           MSLIL+E+FDPFLSMIN+CPVLNTP DWKETPAAHIFIADLPGLKK+QV+VEVMEDG+GR
Sbjct: 1   MSLILNELFDPFLSMINRCPVLNTPIDWKETPAAHIFIADLPGLKKEQVEVEVMEDGNGR 60

Query: 61  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 120
           LLQISGDR  DATA ++  NDESSGHKWR VERCRGKFCRRFRLP NVKA EVRAAMENG
Sbjct: 61  LLQISGDR-VDATANDE--NDESSGHKWRHVERCRGKFCRRFRLPENVKAGEVRAAMENG 120

Query: 121 VLRVTVPKEEVKKPEKKVIEIETL 145
           +L VTVPKEEVKKPEKKVIEIET+
Sbjct: 121 ILTVTVPKEEVKKPEKKVIEIETV 141

[Close]

BLAST of CSPI03G25970 vs. NCBI nr
Match: KAG6790050.1 (hypothetical protein POTOM_006193 [Populus tomentosa])

HSP 1 Score: 197.6 bits (501), Expect = 7.4e-47
Identity = 97/138 (70.29%), Postives = 118/138 (85.51%), Query Frame = 0


Query: 7   EIFDPFLSMINQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISG 66
           EIFDPFLSMIN+CPVLNTPTDWKETP AHIF++DLPGLKK++V VEV++  +G++LQISG
Sbjct: 11  EIFDPFLSMINRCPVLNTPTDWKETPDAHIFVSDLPGLKKEEVTVEVVD--EGKVLQISG 70

Query: 67  DRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTV 126
           DR       N++ N+++   KW RVERCRGKF RRFRLPGN K+DEV+A+MENGVL VTV
Sbjct: 71  DR------KNEEINEDNKNDKWHRVERCRGKFLRRFRLPGNAKSDEVKASMENGVLVVTV 130

Query: 127 PKEEVKKPEKKVIEIETL 145
           PK+E+KKPEKKVIEIE +
Sbjct: 131 PKQEIKKPEKKVIEIEEI 140

[Close]

BLAST of CSPI03G25970 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 134.0 bits (336), Expect = 9.4e-32
Identity = 75/146 (51.37%), Postives = 95/146 (65.07%), Query Frame = 0


Query: 7   EIFDPFLSMINQCPVLNTP-----------TDWKETPAAHIFIADLPGLKKDQVKVEVME 66
           ++FDPF   +    + N P            DW+ETP AH+F ADLPGL+K++VKVEV  
Sbjct: 22  DVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEAHVFKADLPGLRKEEVKVEV-- 81

Query: 67  DGDGRLLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRA 126
             DG +LQISG+R ++    N++KND     KW RVER  GKF RRFRLP N K +E++A
Sbjct: 82  -EDGNILQISGERSNE----NEEKND-----KWHRVERSSGKFTRRFRLPENAKMEEIKA 141

Query: 127 AMENGVLRVTVPKEEVKKPEKKVIEI 142
           +MENGVL VTVPK   KKPE K I+I
Sbjct: 142 SMENGVLSVTVPKVPEKKPEVKSIDI 155

[Close]

BLAST of CSPI03G25970 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 125.6 bits (314), Expect = 3.3e-29
Identity = 71/141 (50.35%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 7   EIFDPFLSMIN------QCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGR 66
           +++DPF  + +         ++N   DW+ETP AH+F ADLPGLKK++VKVE+ ED    
Sbjct: 23  DVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEIEEDS--- 82

Query: 67  LLQISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENG 126
           +L+ISG+R  +     + KND      W RVER  G+F RRFRLP NVK D+V+AAMENG
Sbjct: 83  VLKISGERHVE----KEDKND-----TWHRVERSSGQFTRRFRLPENVKMDQVKAAMENG 142

Query: 127 VLRVTVPKEEVKKPEKKVIEI 142
           VL VTVPK E KK + K I+I
Sbjct: 143 VLTVTVPKAETKKADVKSIQI 151

[Close]

BLAST of CSPI03G25970 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 124.8 bits (312), Expect = 5.7e-29
Identity = 70/119 (58.82%), Postives = 82/119 (68.91%), Query Frame = 0


Query: 23  NTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKNDE 82
           N   DWKETP AH+F ADLPGLKK++VKVEV    D  +LQISG+R  +    N++KND 
Sbjct: 51  NARVDWKETPEAHVFKADLPGLKKEEVKVEV---EDKNVLQISGERSKE----NEEKND- 110

Query: 83  SSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 142
               KW RVER  GKF RRFRLP N K +EV+A MENGVL V VPK   KKP+ K I+I
Sbjct: 111 ----KWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDI 157

[Close]

BLAST of CSPI03G25970 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 124.4 bits (311), Expect = 7.5e-29
Identity = 67/119 (56.30%), Postives = 84/119 (70.59%), Query Frame = 0


Query: 23  NTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLLQISGDRGDDATAGNDKKNDE 82
           N   DW+ETP AH+F AD+PGLKK++VKVEV    DG +LQISG+R  +    N++K+D 
Sbjct: 48  NAKVDWRETPEAHVFKADVPGLKKEEVKVEV---EDGNILQISGERSSE----NEEKSD- 107

Query: 83  SSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVLRVTVPKEEVKKPEKKVIEI 142
                W RVER  GKF RRFRLP N K +EV+A+MENGVL VTVPK +  KPE K ++I
Sbjct: 108 ----TWHRVERSSGKFMRRFRLPENAKVEEVKASMENGVLSVTVPKVQESKPEVKSVDI 154

[Close]

BLAST of CSPI03G25970 vs. TAIR 10
Match: AT1G59860.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 5.0e-25
Identity = 64/140 (45.71%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 7   EIFDPFLSM----INQCPVLNTPTDWKETPAAHIFIADLPGLKKDQVKVEVMEDGDGRLL 66
           +++DPF  +     +   + N   DWKET  AH+F ADLPG+KK++VKVE+ +D    +L
Sbjct: 25  DVWDPFKELQFPSSSSSAIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDS---VL 84

Query: 67  QISGDRGDDATAGNDKKNDESSGHKWRRVERCRGKFCRRFRLPGNVKADEVRAAMENGVL 126
           +ISG+R  +     ++K D      W RVER  G F R+FRLP NVK D+V+A+MENGVL
Sbjct: 85  KISGERHVE----KEEKQD-----TWHRVERSSGGFSRKFRLPENVKMDQVKASMENGVL 144

Query: 127 RVTVPKEEVKKPEKKVIEIE 143
            VTVPK E  K + +V  I+
Sbjct: 145 TVTVPKVETNKKKAQVKSID 152

The following BLAST results are available for this feature:

BLAST of CSPI03G25970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30221	1.2e-31	55.63	17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
O82011	1.6e-31	55.63	17.7 kDa class I heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
P27879	3.5e-31	60.66	18.1 kDa class I heat shock protein (Fragment) OS=Medicago sativa OX=3879 GN=HSP...	[more]
P27880	5.9e-31	60.00	18.2 kDa class I heat shock protein OS=Medicago sativa OX=3879 GN=HSP18.2 PE=2 S...	[more]
P27396	1.0e-30	60.83	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]

BLAST of CSPI03G25970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8Q9	2.4e-75	100.00	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G595190 PE=3 S...	[more]
A0A1S3BNE8	3.0e-70	95.83	class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103491749 PE=3 SV=...	[more]
A0A5A7VF09	2.0e-69	95.14	Class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A4U5Q7Y7	6.1e-47	72.46	18.1 kDa class I heat shock protein-like OS=Populus alba OX=43335 GN=D5086_00001...	[more]
A0A6M2F427	1.4e-46	71.74	SHSP domain-containing protein OS=Populus davidiana OX=266767 PE=3 SV=1	[more]

BLAST of CSPI03G25970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145723.1	4.9e-75	100.00	class I heat shock protein [Cucumis sativus] >KGN58218.1 hypothetical protein Cs...	[more]
XP_008450042.1	6.3e-70	95.83	PREDICTED: class I heat shock protein-like [Cucumis melo]	[more]
KAA0066962.1	4.1e-69	95.14	class I heat shock protein-like [Cucumis melo var. makuwa] >TYK30241.1 class I h...	[more]
XP_038875560.1	1.5e-60	86.11	class I heat shock protein-like [Benincasa hispida]	[more]
KAG6790050.1	7.4e-47	70.29	hypothetical protein POTOM_006193 [Populus tomentosa]	[more]

BLAST of CSPI03G25970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G53540.1	9.4e-32	51.37	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	3.3e-29	50.35	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	5.7e-29	58.82	heat shock protein 18.2	[more]
AT3G46230.1	7.5e-29	56.30	heat shock protein 17.4	[more]
AT1G59860.1	5.0e-25	45.71	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 1..142 e-value: 7.0E-37 score: 128.4
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 12..141
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 27..141 e-value: 1.6E-21 score: 76.3
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 17..144 score: 25.387705
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..87
None	No IPR available	PANTHER	PTHR11527:SF314	CYTOSOLIC CLASS I SMALL HEAT SHOCK PROTEIN	coord: 3..142
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 3..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G25970.1	CSPI03G25970.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding