Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGGTTTCTGAACTCAACCGGGATGCTTCTAATAGGTGTGAAAGAGGAAGGAGTGATCGAAGCTCTAGAGAGATTTCAGTCTCACCCCTCGACAATGTGCTAGAGGTCAACCTGGAAGATTTATCGAGTTTTTCAAAATGGAAGATGGGTTGTAGGTACTTCCCTGACCTCATGGCATTGGAGCTAGTAGCGAACTTGTAA mRNA sequence ATGAAGGTTTCTGAACTCAACCGGGATGCTTCTAATAGGTGTGAAAGAGGAAGGAGTGATCGAAGCTCTAGAGAGATTTCAGTCTCACCCCTCGACAATGTGCTAGAGGTCAACCTGGAAGATTTATCGAGTTTTTCAAAATGGAAGATGGGTTGTAGGTACTTCCCTGACCTCATGGCATTGGAGCTAGTAGCGAACTTGTAA Coding sequence (CDS) ATGAAGGTTTCTGAACTCAACCGGGATGCTTCTAATAGGTGTGAAAGAGGAAGGAGTGATCGAAGCTCTAGAGAGATTTCAGTCTCACCCCTCGACAATGTGCTAGAGGTCAACCTGGAAGATTTATCGAGTTTTTCAAAATGGAAGATGGGTTGTAGGTACTTCCCTGACCTCATGGCATTGGAGCTAGTAGCGAACTTGTAA Protein sequence MKVSELNRDASNRCERGRSDRSSREISVSPLDNVLEVNLEDLSSFSKWKMGCRYFPDLMALELVANL*
Homology
BLAST of CSPI03G25710 vs. NCBI nr
Match: KAE8650781.1 (hypothetical protein Csa_017536 [Cucumis sativus]) HSP 1 Score: 136.0 bits (341), Expect = 1.2e-28 Identity = 67/67 (100.00%), Postives = 67/67 (100.00%), Query Frame = 0
Query: 1 MKVSELNRDASNRCERGRSDRSSREISVSPLDNVLEVNLEDLSSFSKWKMGCRYFPDLMA 60
MKVSELNRDASNRCERGRSDRSSREISVSPLDNVLEVNLEDLSSFSKWKMGCRYFPDLMA
Sbjct: 1 MKVSELNRDASNRCERGRSDRSSREISVSPLDNVLEVNLEDLSSFSKWKMGCRYFPDLMA 60
Query: 61 LELVANL 68
LELVANL
Sbjct: 61 LELVANL 67
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAE8650781.1 | 1.2e-28 | 100.00 | hypothetical protein Csa_017536 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..23 |
Relationships
The following mRNA feature(s) are a part of this gene:
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