CSPI03G25490 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G25490
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionProtein transport protein Sec61 subunit gamma
LocationChr3: 22856228 .. 22860311 (+)
RNA-Seq ExpressionCSPI03G25490
SyntenyCSPI03G25490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCACCATTTTATTAATCACACGAGCCGGAGCCGCATCAGAAACAAACAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGGTACGGTTTCCGAATCCCTTTTCATCTCTTTGTTTTCATAGATCTTGTAACCAATTTCCTCTGTTTTGCGTGATTTGTGTAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAGGTCAGGAGTTTTGGCTTTTCACTTAAGTTTCTCTAGATTTCACTGTTTTGTGAATTGGGCTCTCGTTTGATTTATTGTTTCGCGAGGTTGGGCTACTTCTATTTTAGAAATCTTTATTCATCGTATCAAAAGTAATAATTAGGTTTGATCTATGCCCAATTTCAGTGTTTGGTATACTATTGATAATTTTTTTACATTGCTAGATGAATCTATATCTATGGCATGTAGGTTATGAAGGGAGAAATATTTCGGTTGTTAGAATAGTGTTTTAGCTATGATTCTATGAAGTATTAAGTTGGCCATTGATGACTTCATCGTGTCCCTTTCCTACATACTCCTTGACTTCCTTGTTTCTTAGAGGTTCTCCATGAAAATCATATTCTCCTTTCAAACAAAATTATCCTGAGAGTTTTCTTACCAATTCGTACTGTTTGCACCGTTCAATCAATAATGTAGGATATATTGAACTTTACTATTCAAGGACACAGTTGTACAACATGTTGAACAAATCCTGTTCAAGCAAGGTCTGTAAGATATATTTAACTAAACTATTCTTCTCAAAATTCTTACAATCACGAGGCGAAAACACATCTAGTCTTCTAGCTCAATCAATACCAAGCTTTAGAACGAAATTTGTTGTCCCATACCAAGCCTTATAGATTGCACGCTGTTAGCTATATAGAAGAACACTCATAGTGGGTAGTTTTGAATGAGGGAGCATTTGGAGTTCTGAATTGGTTATTATATTTTGCTGGAATAGTTTATAGGATTTAATAGTCTACCCCACCCAATTTAGGTAGGGGGCTTAAACGCCCGCTAATTGGTTGCTCAATTTACCCACTGATCTAGACTCTTACTTTAATCTTTGAACGTACGAAAGAGGGTGGAAAACCAAATTTTGTTGGGTGACGTATTTTGCTCACCTTTGCATAAGCATAATGATTGATGCATTCTACTTGATGTCTGCATGATTGTGCATTGTTTTCATTCCCTAATAACATTTGCATATATTAATTGATCAGTGTGATTGTTTGTGGATTGAACCCTTTTTGAGACATTATCTTGGGTAAATCTTTCAATTGGTTATGCCCTTCAATGTTCATTTATTGCGTGTTGAATCTGTTTTGCAGACAGCTGAGGCCACAAAAGGAGCAGGCCGGACAATATAGAAGAATGGAACTTGATCAACTATTTCAAATCCTTACCAATGTTATTATTAATTTAAAAAGCTTAATTTATTTTCTAGAGAAGTATAAAACTCCATGAATGGCTGTAACGAATTGCTAGGATTATGTCTTACTCCTGATTGATCCAGTGTCCTTGTTCATGGTCACTGGTTATTTTAGAGTATAGTGACTAAGTTTTTGCTTTATCATATGAAAGTTGGCTTCATCATTGGTATGAAAACTGTAGTTTTCCCCTCTCCTTCATCTCGTCAGGTGTCCGCAAATTGAACTAATTAACTTTGAAATGGCCAAGGAAGCCAAGATATTTTCAGTAAGGTGCGGTCGTGCACTCGAATGCACATAACATTTTTGTATAATAGATGTTTCATGTAGCATATCATTATTTTTTGGGTCAAATTTTGACTTTTGGACTAAACAGAGGTGGGACTCGTCCTTTGAACAATCTCCTGAATCTCTTCTGATGACAGGATTGATGCTGAACTGTCAAATTCCACACTCTCCAGCTGCTGGTGTAACTGGAGACAAACGAGAAACAGAAACATTAAGTCACCAATATGGGGTATATAATTAACACAACCACCTAATCAGATTGCAATTTGTTTCCCTCAAAATAGTTATCTTGTTGAAAGAGAAAACTGCAAACCTTCTCGAGAATGGCGGATTGATCATAAGAGTGTAGCTTGCGCATATGTTGCAGCATCTCCAGTTGCTGTATGAAGAGTACATTCAGTTTCCAACCACTATTCGTATTCAAAATATTTGCTTTCATGTAGTTTGACACGGCCAAGGAAATAAAGGTTGTCACCTTACCTTATCATGTAGTTTTTGTTGATTATTCATTTTTTCTGCAAAATCATCTGGTTCAAGCTCTGCTTCATCACAAGCCATCTCTTCCCTATCATATTTTTCAGCACAATTTCAATTAATCTATGAGCTCTTACTTCTACAGAGTTCAGTAAAAAGAACAAGAAGAGTTCAGAATAAATCAAAAGGAAGAAGACAAATGCACACATACAAATACGCTGGTAAAAATGAGCTCTCTCTATGCTATCATCAGATTATCAATTCATATGATGAGTTGAATGACAGTTTTCAACTTTTGCATTCGGTTATTTTATTTTTTATCCTTTTATTTGGCTAGAGAGGTTGTTCAAAACAGAAAAATGGCTTACATTGCGACGAACTTGTAGAAATGAACCATGAGCTCGTGATCATTCTCATAATATGAACTCACTTTCCCTAGACAGGATATACCAAATCCTGCATCTGTAGAAGAAACAAAGATCAACACAAGCATAAATGTTCTAGGTTATTGGATTATGAAAGATGGCCAATGGCACAACAATCCAGCACAAATAGGAATTTTAGGTATGTTTTAATTTTTTAAAAAATGCTAATGCTCACTAAAAATATTCAAATTAAACAGCACACTAGAAACAAGATGATTAAACAGAAGAGTTCAAAATTTATAGAATGACAGAGAAACCTTTCAATCAAAAGAGAATGCAGAGCCACTACCAGATAAGATGCTTCACAGGCTAGATCATGAAACTAGAACAAGCAGTTTCCACTATTCAAATGGGAAAAAAGAAAAAAAAAACAAAAAAACAAATCATGATTTCAAGGAAAGTGACAAAAGAATAGGCAAAACTTAAAAAACAGTAATGTACTACAAAAGCTGACCAACTCCCATTTCCGAAAAAATCTCCTCCTGAATTGCTGTTGTCACAGCAACGGCTTCCTGCAGGATCAACAAAAACTTCCAGAATAAGAACAACTCACTGAAGTACCAAAAACTTCTCATCATCTACAGTTACACCATTGACTTTCAGCACTACCGTACTATCACAAACTCAAATTCTTATGGTTTGAAAATTGAAAACCTTGAATTAAAGAATGAACCTAAGACCTAGGTACATAACAAGGACAAAAAGGAAATAGTACTTATGATCAAAGCAAGAACAGTGGCTGATGGAGGGGCAATAGAGATTATAAAAGAGAACCCTCACAAACCCAATTCCACCGTAAGAAACCACAAGTTTTCTGTCAACCCGATGTGGGTGAATTCGGAAATTGTCCTATGAGATTAGGCCAAATGTGCTCAAGCTGCCCTAGACACTACGAAAAAGAAACATACAAACAAACAAAACAAACCCATTTCCCCTGAATAAATGGGGGTTTGTGAAGAAAGCTTAACCTATCCATACAAATTATTCCAAGAGACAAGGAACGAAACCCCATTTTGTAATAGGCAGTGACAAGTAACAAGGAAACATCTAAATCAAAAACCATTGAAGTAGAAACGAAATTTGAAGAAGACTCACCTGATTGTCATCCCGAACAGCATCGGCGATCCGTTTCTTCACATCTGTAAGATTAAGAGGAGAAACAAAACGATGATTCAGGGGAAATGAGGAGTGGGAAAGCGGAAAGAAAAGAGTAATGCAAGATTAGAACCAGAGAGAGAAGTGAGTTGAGAAAAGCGATTAAAAAGATGAAACAACTGGTCTCTAGAAAGCATCGAAGAAAAAGGAAGGGTTTGAGGAATGCCG

mRNA sequence

GTTCACCATTTTATTAATCACACGAGCCGGAGCCGCATCAGAAACAAACAAAAATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAGACAGCTGAGGCCACAAAAGGAGCAGGCCGGACAATATAGAAGAATGGAACTTGATCAACTATTTCAAATCCTTACCAATGTTATTATTAATTTAAAAAGCTTAATTTATTTTCTAGAGAAGTATAAAACTCCATGAATGGCTGTAACGAATTGCTAGGATTATGTCTTACTCCTGATTGATCCAGTGTCCTTGTTCATGGTCACTGGTTATTTTAGAGTATAGTGACTAAGTTTTTGCTTTATCATATGAAAGTTGGCTTCATCATTGGTATGAAAACTGTAGTTTTCCCCTCTCCTTCATCTCGTCAGGTGTCCGCAAATTGAACTAATTAACTTTGAAATGGCCAAGGAAGCCAAGATATTTTCAGTAAGGATTGATGCTGAACTGTCAAATTCCACACTCTCCAGCTGCTGGTGTAACTGGAGACAAACGAGAAACAGAAACATTAAGTCACCAATATGGGGTATATAATTAACACAACCACCTAATCAGATTGCAATTTGTTTCCCTCAAAATAGTTATCTTGTTGAAAGAGAAAACTGCAAACCTTCTCGAGAATGGCGGATTGATCATAAGAGTGTAGCTTGCGCATATGTTGCAGCATCTCCAGTTGCTGTATGAAGAGTACATTCAGTTTCCAACCACTATTCGTATTCAAAATATTTGCTTTCATGTAGTTTGACACGGCCAAGGAAATAAAGAGTTCAGTAAAAAGAACAAGAAGAGTTCAGAATAAATCAAAAGGAAGAAGACAAATGCACACATACAAATACGCTGGATATACCAAATCCTGCATCTGTAGAAGAAACAAAGATCAACACAAGCATAAATGTTCTAGGTTATTGGATTATGAAAGATGGCCAATGGCACAACAATCCAGCACAAATAGGAATTTTAGGTATGTTTTAATTTTTTAAAAAATGCTAATGCTCACTAAAAATATTCAAATTAAACAGCACACTAGAAACAAGATGATTAAACAGAAGAGTTCAAAATTTATAGAATGACAGAGAAACCTTTCAATCAAAAGAGAATGCAGAGCCACTACCAGATAAGATGCTTCACAGGCTAGATCATGAAACTAGAACAAGCAGTTTCCACTATTCAAATGGGAAAAAAGAAAAAAAAAACAAAAAAACAAATCATGATTTCAAGGAAAGTGACAAAAGAATAGGCAAAACTTAAAAAACAGTAATGTACTACAAAAGCTGACCAACTCCCATTTCCGAAAAAATCTCCTCCTGAATTGCTGTTGTCACAGCAACGGCTTCCTGCAGGATCAACAAAAACTTCCAGAATAAGAACAACTCACTGAAGTACCAAAAACTTCTCATCATCTACAGTTACACCATTGACTTTCAGCACTACCGTACTATCACAAACTCAAATTCTTATGGTTTGAAAATTGAAAACCTTGAATTAAAGAATGAACCTAAGACCTAGGTACATAACAAGGACAAAAAGGAAATAGTACTTATGATCAAAGCAAGAACAGTGGCTGATGGAGGGGCAATAGAGATTATAAAAGAGAACCCTCACAAACCCAATTCCACCGTAAGAAACCACAAGTTTTCTGTCAACCCGATGTGGGTGAATTCGGAAATTGTCCTATGAGATTAGGCCAAATGTGCTCAAGCTGCCCTAGACACTACGAAAAAGAAACATACAAACAAACAAAACAAACCCATTTCCCCTGAATAAATGGGGGTTTGTGAAGAAAGCTTAACCTATCCATACAAATTATTCCAAGAGACAAGGAACGAAACCCCATTTTGTAATAGGCAGTGACAAGTAACAAGGAAACATCTAAATCAAAAACCATTGAAGTAGAAACGAAATTTGAAGAAGACTCACCTGATTGTCATCCCGAACAGCATCGGCGATCCGTTTCTTCACATCTGTAAGATTAAGAGGAGAAACAAAACGATGATTCAGGGGAAATGAGGAGTGGGAAAGCGGAAAGAAAAGAGTAATGCAAGATTAGAACCAGAGAGAGAAGTGAGTTGAGAAAAGCGATTAAAAAGATGAAACAACTGGTCTCTAGAAAGCATCGAAGAAAAAGGAAGGGTTTGAGGAATGCCG

Coding sequence (CDS)

ATGGACGCCATTGATTCCGTCTTCGATCCACTCCGGGAGTTCGCCAAGGACAGCGTACGTCTCGTCAAGCGCTGTCACAAACCCGATCGCAAAGAGTTCACAAAGGTCGCGGTTCGTACAGCGATTGGCTTCGTCGTCATGGGATTCGTTGGTTTCTTCGTCAAGCTCATCTTTATCCCCATCAATAACATCATCGTCGGATCTGGCTAG

Protein sequence

MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIPINNIIVGSG*
Homology
[Close]
BLAST of CSPI03G25490 vs. ExPASy Swiss-Prot
Match: P38385 (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-30
Identity = 66/69 (95.65%), Postives = 67/69 (97.10%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSV DPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. ExPASy Swiss-Prot
Match: P0DI74 (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-29
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of CSPI03G25490 vs. ExPASy Swiss-Prot
Match: P0DI75 (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.2e-29
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of CSPI03G25490 vs. ExPASy Swiss-Prot
Match: Q9SMP2 (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-28
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of CSPI03G25490 vs. ExPASy Swiss-Prot
Match: Q7Z1B8 (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=213494 GN=SEC61G PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 7.1e-22
Identity = 50/68 (73.53%), Postives = 57/68 (83.82%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MD +    +P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+GFFVKLI IP
Sbjct: 1  MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIGFFVKLIHIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

[Close]
BLAST of CSPI03G25490 vs. ExPASy TrEMBL
Match: A0A1U8ISF2 (protein transport protein Sec61 subunit gamma OS=Gossypium hirsutum OX=3635 GN=LOC107899725 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. ExPASy TrEMBL
Match: A0A5D2CZA3 (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G091500v1 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. ExPASy TrEMBL
Match: A0A0D2TL23 (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G086400 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. ExPASy TrEMBL
Match: A0A5D2VBP1 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G086100v1 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. ExPASy TrEMBL
Match: A0A6J1J2N1 (protein transport protein Sec61 subunit gamma-like OS=Cucurbita maxima OX=3661 GN=LOC111482125 PE=3 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 2.1e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. NCBI nr
Match: XP_004145664.1 (protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_008450108.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Cucumis melo] >XP_012460780.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_012460781.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_012460782.1 PREDICTED: protein transport protein Sec61 subunit gamma [Gossypium raimondii] >XP_016681000.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_016681001.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_022156520.1 protein transport protein Sec61 subunit gamma [Momordica charantia] >XP_022934076.1 protein transport protein Sec61 subunit gamma-like [Cucurbita moschata] >XP_022983556.1 protein transport protein Sec61 subunit gamma-like [Cucurbita maxima] >XP_023526351.1 protein transport protein Sec61 subunit gamma-like [Cucurbita pepo subsp. pepo] >XP_038876188.1 protein transport protein Sec61 subunit gamma-like [Benincasa hispida] >KAA3464170.1 protein transport protein Sec61 subunit gamma [Gossypium australe] >KAB2034429.1 hypothetical protein ES319_D04G085300v1 [Gossypium barbadense] >KAG6581101.1 Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017832.1 Protein transport protein Sec61 subunit gamma [Cucurbita argyrosperma subsp. argyrosperma] >MBA0572089.1 hypothetical protein [Gossypium lobatum] >MBA0630508.1 hypothetical protein [Gossypium davidsonii] >MBA0666224.1 hypothetical protein [Gossypium klotzschianum] >MBA0750649.1 hypothetical protein [Gossypium gossypioides] >MBA0842256.1 hypothetical protein [Gossypium armourianum] >MBA0872547.1 hypothetical protein [Gossypium schwendimanii] >TYG73313.1 hypothetical protein ES288_D04G091500v1 [Gossypium darwinii] >TYH76504.1 hypothetical protein ES332_D04G091100v1 [Gossypium tomentosum] >TYI86738.1 hypothetical protein E1A91_D04G086100v1 [Gossypium mustelinum])

HSP 1 Score: 137.5 bits (345), Expect = 4.4e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. NCBI nr
Match: XP_028063760.1 (protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063762.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063763.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063764.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063765.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063766.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063767.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099424.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099425.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099426.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099427.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099428.1 protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028099430.1 protein transport protein Sec61 subunit gamma [Camellia sinensis])

HSP 1 Score: 136.7 bits (343), Expect = 7.5e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDA+DSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDALDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. NCBI nr
Match: XP_007215225.2 (uncharacterized protein LOC18784392 [Prunus persica] >ONI19949.1 hypothetical protein PRUPE_3G307000 [Prunus persica] >ONI19950.1 hypothetical protein PRUPE_3G307000 [Prunus persica])

HSP 1 Score: 136.3 bits (342), Expect = 9.8e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1   MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
           MDAIDSVFDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 75  MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 134

Query: 61  INNIIVGSG 70
           INNIIVGSG
Sbjct: 135 INNIIVGSG 143

[Close]
BLAST of CSPI03G25490 vs. NCBI nr
Match: XP_012489479.1 (PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_012489480.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_012489481.1 PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimondii] >XP_016686809.1 protein transport protein Sec61 subunit gamma [Gossypium hirsutum] >XP_016695151.1 protein transport protein Sec61 subunit gamma-like [Gossypium hirsutum] >XP_016695152.1 protein transport protein Sec61 subunit gamma-like [Gossypium hirsutum] >KAB2002517.1 hypothetical protein ES319_D11G071700v1 [Gossypium barbadense] >TYG44137.1 hypothetical protein ES288_D11G074400v1 [Gossypium darwinii] >TYH42588.1 hypothetical protein ES332_D11G073800v1 [Gossypium tomentosum] >TYI54418.1 hypothetical protein E1A91_D11G073600v1 [Gossypium mustelinum] >KAB2002518.1 hypothetical protein ES319_D11G071700v1 [Gossypium barbadense])

HSP 1 Score: 136.3 bits (342), Expect = 9.8e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVALRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. NCBI nr
Match: XP_008231108.1 (PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_016649155.1 PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_021823017.1 protein transport protein Sec61 subunit gamma [Prunus avium] >XP_038698211.1 protein transport protein Sec61 subunit gamma isoform X2 [Tripterygium wilfordii] >PQP94489.1 uncharacterized protein Pyn_35397 [Prunus yedoensis var. nudiflora] >CAB4275454.1 unnamed protein product [Prunus armeniaca] >PQP96178.1 uncharacterized protein Pyn_36215 [Prunus yedoensis var. nudiflora] >CAB4305825.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 136.3 bits (342), Expect = 9.8e-29
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSVFDPLREF+KDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVFDPLREFSKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGSG 70
          INNIIVGSG
Sbjct: 61 INNIIVGSG 69

[Close]
BLAST of CSPI03G25490 vs. TAIR 10
Match: AT4G24920.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 129.8 bits (325), Expect = 8.6e-31
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of CSPI03G25490 vs. TAIR 10
Match: AT5G50460.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 129.8 bits (325), Expect = 8.6e-31
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          MDAIDSV DPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP
Sbjct: 1  MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60

Query: 61 INNIIVGS 69
          INNIIVG+
Sbjct: 61 INNIIVGA 68

[Close]
BLAST of CSPI03G25490 vs. TAIR 10
Match: AT3G48570.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 124.4 bits (311), Expect = 3.6e-29
Identity = 61/68 (89.71%), Postives = 65/68 (95.59%), Query Frame = 0 

Query: 1  MDAIDSVFDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLIFIP 60
          M+AIDS  DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKL+FIP
Sbjct: 1  MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVGFFVKLVFIP 60

Query: 61 INNIIVGS 69
          INNIIVGS
Sbjct: 61 INNIIVGS 68

The following BLAST results are available for this feature:
BLAST of CSPI03G25490 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P383851.4e-3095.65Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX... [more]
P0DI741.2e-2994.12Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 ... [more]
P0DI751.2e-2994.12Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9SMP25.1e-2889.71Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 ... [more]
Q7Z1B87.1e-2273.53Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=21349... [more]
BLAST of CSPI03G25490 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1U8ISF22.1e-29100.00protein transport protein Sec61 subunit gamma OS=Gossypium hirsutum OX=3635 GN=L... [more]
A0A5D2CZA32.1e-29100.00Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D04G091500v1 PE=... [more]
A0A0D2TL232.1e-29100.00Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G086400 PE=3 ... [more]
A0A5D2VBP12.1e-29100.00Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D04G086100v1 P... [more]
A0A6J1J2N12.1e-29100.00protein transport protein Sec61 subunit gamma-like OS=Cucurbita maxima OX=3661 G... [more]
BLAST of CSPI03G25490 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004145664.14.4e-29100.00protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_008450108.1 ... [more]
XP_028063760.17.5e-2998.55protein transport protein Sec61 subunit gamma [Camellia sinensis] >XP_028063762.... [more]
XP_007215225.29.8e-2998.55uncharacterized protein LOC18784392 [Prunus persica] >ONI19949.1 hypothetical pr... [more]
XP_012489479.19.8e-2998.55PREDICTED: protein transport protein Sec61 subunit gamma-like [Gossypium raimond... [more]
XP_008231108.19.8e-2998.55PREDICTED: protein transport protein Sec61 subunit gamma [Prunus mume] >XP_01664... [more]
BLAST of CSPI03G25490 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G24920.18.6e-3194.12secE/sec61-gamma protein transport protein [more]
AT5G50460.18.6e-3194.12secE/sec61-gamma protein transport protein [more]
AT3G48570.13.6e-2989.71secE/sec61-gamma protein transport protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023391Protein translocase SecE domain superfamilyGENE3D1.20.5.820Preprotein translocase SecE subunitcoord: 7..68
e-value: 1.3E-31
score: 110.0
IPR023391Protein translocase SecE domain superfamilySUPERFAMILY103456Preprotein translocase SecE subunitcoord: 5..65
IPR008158Protein translocase SEC61 complex, gamma subunitTIGRFAMTIGR00327TIGR00327coord: 11..66
e-value: 1.8E-16
score: 57.7
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 13..65
e-value: 1.2E-14
score: 54.0
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPROSITEPS01067SECE_SEC61Gcoord: 14..42
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitHAMAPMF_00422SecEcoord: 9..64
score: 12.919514
NoneNo IPR availablePANTHERPTHR12309SEC61 GAMMA SUBUNITcoord: 1..69
NoneNo IPR availablePANTHERPTHR12309:SF24PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA-3coord: 1..69

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G25490.1CSPI03G25490.1mRNA
CSPI03G25490.2CSPI03G25490.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031204 posttranslational protein targeting to membrane, translocation
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006605 protein targeting
biological_process GO:0015031 protein transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0071261 Ssh1 translocon complex
cellular_component GO:0016020 membrane
molecular_function GO:0008320 protein transmembrane transporter activity