CSPI03G25480 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G25480
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 22847613 .. 22848258 (+)
RNA-Seq ExpressionCSPI03G25480
SyntenyCSPI03G25480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCCCCACCATATTAAGTAGCTTTATACAGTCTCAAAAGAAGTTTGTGTAGAAGAAGAGAAATTGATCGATGGAGGCAAACAAAAGAAAACTTAGAGGCTTCATGAGAGGGAAATTGATGCCTTTCTACAAGCAATATAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGGGAGTGCTATAGTAGTGTTTCTCAACATAACATTGGTTTATTGGTGCAGGATGACCCCGGTCGGGACACGACGGCCACTCGTGACTCATTAAGTCAGTTTGATCGTTCATATGGAATCATAGCTGACGAAGGTGTCGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCAAGATTCAAAAGCTTGAATGAGTTACCTCATCCAATAGAATTGTCGTCGATTCCATTGCCCCACCAATAGATTTGATGACCTTGTCGAGCACTTCTCTATTATTTATCTTGGACTTTACTAGTTGATTATTATTCTAAGTAAAGAACCGATGCTCATGTGGTTGGATATAGTGTTTCTCTCACGTATATAGAAGGTTTGAATCCCCACCTTTTATATATTTATAATGAAAAAAAACTTGAATGCATCTTCTCATATATTTCTTATCTCTCCATATACAAAAATA

mRNA sequence

ATCCCCACCATATTAAGTAGCTTTATACAGTCTCAAAAGAAGTTTGTGTAGAAGAAGAGAAATTGATCGATGGAGGCAAACAAAAGAAAACTTAGAGGCTTCATGAGAGGGAAATTGATGCCTTTCTACAAGCAATATAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGGGAGTGCTATAGTAGTGTTTCTCAACATAACATTGGTTTATTGGTGCAGGATGACCCCGGTCGGGACACGACGGCCACTCGTGACTCATTAAGTCAGTTTGATCGTTCATATGGAATCATAGCTGACGAAGGTGTCGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCAAGATTCAAAAGCTTGAATGAGTTACCTCATCCAATAGAATTGTCGTCGATTCCATTGCCCCACCAATAGATTTGATGACCTTGTCGAGCACTTCTCTATTATTTATCTTGGACTTTACTAGTTGATTATTATTCTAAGTAAAGAACCGATGCTCATGTGGTTGGATATAGTGTTTCTCTCACGTATATAGAAGGTTTGAATCCCCACCTTTTATATATTTATAATGAAAAAAAACTTGAATGCATCTTCTCATATATTTCTTATCTCTCCATATACAAAAATA

Coding sequence (CDS)

ATGGAGGCAAACAAAAGAAAACTTAGAGGCTTCATGAGAGGGAAATTGATGCCTTTCTACAAGCAATATAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCATAGGGAGTGCTATAGTAGTGTTTCTCAACATAACATTGGTTTATTGGTGCAGGATGACCCCGGTCGGGACACGACGGCCACTCGTGACTCATTAAGTCAGTTTGATCGTTCATATGGAATCATAGCTGACGAAGGTGTCGATGTAAAGGCAGCAAATTATATTTCCTCCACGTTAGCAAGATTCAAAAGCTTGAATGAGTTACCTCATCCAATAGAATTGTCGTCGATTCCATTGCCCCACCAATAG

Protein sequence

MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ*
Homology
BLAST of CSPI03G25480 vs. ExPASy TrEMBL
Match: A0A0A0LVE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.3e-61
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60
           MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60

Query: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 120
           RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ
Sbjct: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 120

BLAST of CSPI03G25480 vs. ExPASy TrEMBL
Match: A0A5D3C0J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001540 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 3.0e-55
Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSV-SQHNIGLLVQDDP 60
           MEANKRKLRGFM+GKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSV SQHNI LLVQD+P
Sbjct: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60

Query: 61  GRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPH 120
            RDTTATR SLSQ D SYGI+ADEGVDVKAANYISSTLARFKSLNELPHPIE+SSIPLPH
Sbjct: 61  SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH 120

BLAST of CSPI03G25480 vs. ExPASy TrEMBL
Match: A0A6A6LUB7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 7.7e-11
Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 0

Query: 1   MEANKRKLRGFMRGKLMPFYK---------QYNGSK-------TKQTGLVGYVFHRE-CY 60
           ME+N RK RGFM+GKLMPFY+         QY  SK       +  T  VG+  H++   
Sbjct: 35  MESN-RKRRGFMKGKLMPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYII 94

Query: 61  SSVSQHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
           +   Q+ +  ++   P     + RD L+QFD+ YG+  DE VD+KAA+YISS   RFK
Sbjct: 95  APPKQNKVSFIIPPAP----DSNRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 147

BLAST of CSPI03G25480 vs. ExPASy TrEMBL
Match: A0A067LN74 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-10
Identity = 47/115 (40.87%), Postives = 62/115 (53.91%), Query Frame = 0

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQ-------------TGLVGYVFHRECYSSVS 60
           ME+N RK RGFM+GKL+PFY+    + T Q                VG+V H++   +  
Sbjct: 1   MESN-RKRRGFMKGKLIPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQDYIITPP 60

Query: 61  QHNIGLLVQD-DPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
           +  +  +V   D  RD       LSQFD+ YG+  DEGVD+KAA YISS   RFK
Sbjct: 61  KQKVSFIVPTADSNRD-----KYLSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

BLAST of CSPI03G25480 vs. ExPASy TrEMBL
Match: A0A2P5FC89 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_089200 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 3.2e-09
Identity = 48/112 (42.86%), Postives = 61/112 (54.46%), Query Frame = 0

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFH-RECYSSVSQHNIGLLVQDD- 60
           ME+N RK RGFM+GKLMPFY+    + +  T  V Y    +   SS S  ++G LV  D 
Sbjct: 1   MESN-RKRRGFMKGKLMPFYRAAKPNSSTTTTTVQYTSKVKPSQSSPSAASVGFLVHQDY 60

Query: 61  ----PGRDTT-----ATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
               P    +      +RDS+ Q D  YG+  DE VD KAA+YISS   RFK
Sbjct: 61  VIAQPKPKISFILPPESRDSVVQLDNLYGVAVDESVDSKAASYISSVQERFK 111

BLAST of CSPI03G25480 vs. NCBI nr
Match: KAA0042928.1 (hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK05327.1 hypothetical protein E5676_scaffold108G001540 [Cucumis melo var. makuwa])

HSP 1 Score: 224.2 bits (570), Expect = 6.2e-55
Identity = 111/121 (91.74%), Postives = 115/121 (95.04%), Query Frame = 0

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSV-SQHNIGLLVQDDP 60
           MEANKRKLRGFM+GKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSV SQHNI LLVQD+P
Sbjct: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60

Query: 61  GRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPH 120
            RDTTATR SLSQ D SYGI+ADEGVDVKAANYISSTLARFKSLNELPHPIE+SSIPLPH
Sbjct: 61  SRDTTATRGSLSQSDHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLPH 120

BLAST of CSPI03G25480 vs. NCBI nr
Match: KAE8650773.1 (hypothetical protein Csa_017653 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 7.1e-43
Identity = 97/120 (80.83%), Postives = 97/120 (80.83%), Query Frame = 0

Query: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60
           MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGL                       DDPG
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGL-----------------------DDPG 60

Query: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 120
           RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ
Sbjct: 61  RDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPLPHQ 97

BLAST of CSPI03G25480 vs. NCBI nr
Match: KAG6588895.1 (hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 145.6 bits (366), Expect = 2.8e-31
Identity = 73/101 (72.28%), Postives = 84/101 (83.17%), Query Frame = 0

Query: 17  MPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPGRDTTATRDSLSQFDRS 76
           MPFYKQY G+KTK TGLVGYVFHR+   ++S HN+ LLV ++PG DT  TRDSL+QFD  
Sbjct: 1   MPFYKQYKGTKTKPTGLVGYVFHRD--YAISPHNVALLVHENPGPDTAVTRDSLTQFDNL 60

Query: 77  YGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPL 118
           YGI+ADEG+DVKAANYISSTLARFKSLNEL  PIE+ S PL
Sbjct: 61  YGIVADEGIDVKAANYISSTLARFKSLNELT-PIEILSPPL 98

BLAST of CSPI03G25480 vs. NCBI nr
Match: KAG7022660.1 (hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 103.6 bits (257), Expect = 1.2e-18
Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0

Query: 17  MPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPGRDTTATRDSLSQFDRS 76
           MPFYKQY G+KTK TGLVGYVFHR+   ++S HN+ LLV ++PG DT  TRDSL+QFD  
Sbjct: 1   MPFYKQYKGTKTKPTGLVGYVFHRD--YAISPHNVALLVHENPGPDTAVTRDSLTQFDSL 60

Query: 77  YGIIADEGVD---------VKAANYISSTLARFKSLNELPHPIELS 114
           YGI+ADEG+D         V+  + +S+ L  F  L  + + ++LS
Sbjct: 61  YGIVADEGIDKYCLLRWLVVRFNDLLSTRLCMFVLLFLVNNLVDLS 104

BLAST of CSPI03G25480 vs. NCBI nr
Match: XP_021648774.1 (uncharacterized protein LOC110641383 [Hevea brasiliensis])

HSP 1 Score: 76.6 bits (187), Expect = 1.6e-10
Identity = 48/118 (40.68%), Postives = 66/118 (55.93%), Query Frame = 0

Query: 1   MEANKRKLRGFMRGKLMPFYK---------QYNGSK-------TKQTGLVGYVFHRE-CY 60
           ME+N RK RGFM+GKLMPFY+         QY  SK       +  T  VG+  H++   
Sbjct: 1   MESN-RKRRGFMKGKLMPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYII 60

Query: 61  SSVSQHNIGLLVQDDPGRDTTATRDSLSQFDRSYGIIADEGVDVKAANYISSTLARFK 102
           +   Q+ +  ++   P     + RD L+QFD+ YG+  DE VD+KAA+YISS   RFK
Sbjct: 61  APPKQNKVSFIIPPAP----DSNRDKLTQFDKVYGVPGDESVDIKAASYISSVQERFK 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LVE71.3e-61100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1[more]
A0A5D3C0J63.0e-5591.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6A6LUB77.7e-1140.68Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1[more]
A0A067LN741.7e-1040.87Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1[more]
A0A2P5FC893.2e-0942.86Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_089200 PE=4 SV... [more]
Match NameE-valueIdentityDescription
KAA0042928.16.2e-5591.74hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK0532... [more]
KAE8650773.17.1e-4380.83hypothetical protein Csa_017653 [Cucumis sativus][more]
KAG6588895.12.8e-3172.28hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7022660.11.2e-1850.94hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_021648774.11.6e-1040.68uncharacterized protein LOC110641383 [Hevea brasiliensis][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36030:SF1SUBFAMILY NOT NAMEDcoord: 1..105
NoneNo IPR availablePANTHERPTHR36030FAMILY NOT NAMEDcoord: 1..105

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G25480.1CSPI03G25480.1mRNA