CSPI03G24810 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G24810
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Gag/pol protein
Location	Chr3: 21972677 .. 21973615 (-)
RNA-Seq Expression	CSPI03G24810
Synteny	CSPI03G24810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTCCATTATAGCATTTTTAGTCTTATATGTAGATGATATTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAATGAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATGTTGTCTAGATATAAAATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGAACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCA

mRNA sequence

ATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTCCATTATAGCATTTTTAGTCTTATATGTAGATGATATTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAATGAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATGTTGTCTAGATATAAAATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGAACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCA

Coding sequence (CDS)

ATGGATGTCAAGACAGCTTTTTTGAATGGTAATCTTGAAGAGAGTATCTATATGTCTCAACCAGAGGGGTTTATAGAACAAGATCAAGAACAAAAGGTTTGTAAGCTTAAAAAATCCATTTATGGATTAAAACAAGCTTCTAGATCCTGGAATATAAGATTTGATACTGCGATCAAATCTTATGGCTTTGAACAAAATGTTGACGAGCCTTGTGTTTACAAAAAGGTCGTCAATTCCATTATAGCATTTTTAGTCTTATATGTAGATGATATTCTACTTATTGGAAATGACGTAGGATATCTTACTGATATCAAGAAATGGCTAGCTATGCAATTTCAAATGAAAGATCTGGGAGATGCACAATACGTTCTCGGAATCCAAATTGTTCGAAACCGTAAGAACAAAACACTAGCCATGTCTCAAGCATCTTACATAGACAAAATGTTGTCTAGATATAAAATGCAGAATTCCAAAAAGGGTCTGCTGCCGTACAGATATGGAATTCATTTGTCAAAGGAACAATGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGAAATATTCCCTATGCTTCCGCTGTTGGAAGTTTAATGTATGCAATGTTATGTACTAGACCTGACATTTGCTACTCAGTAGGGATGGTCAGTAGGTATCAATCCAATCCTGGACGTGATCACTGGACAGCCGTTAAAAACATTCTAAAATATCTTCGAAGAACAAAAGACTACATGCTCATGTATGGTACAAAGGATCTGATCCTTACTGGATACACTGATTCAGATTTCCAAACTGATAAAGATGCTAGAAAGTCTACATCAGGATCAGTATTTACTCTAAATGGAGGAGCAGTAGTTTGGAGAAGCATAAAGCAAACTTGTATAGCTGATTCCACAATGGAAGCTGAATACGTAGCGGCTTGTGAAGCAGCAAAAGAAGCA

Protein sequence

MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKEA

Homology

[Close]

BLAST of CSPI03G24810 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 2.2e-86
Identity = 161/313 (51.44%), Postives = 219/313 (69.97%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            +DVKTAFL+G+LEE IYM QPEGF    ++  VCKL KS+YGLKQA R W ++FD+ +KS
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   YGFEQNVDEPCVY-KKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGD 120
              + +   +PCVY K+   +    L+LYVDD+L++G D G +  +K  L+  F MKDLG 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  AQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTP 180
            AQ +LG++IVR R ++ L +SQ  YI+++L R+ M+N+K    P    + LSK+ CP T 
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100

Query: 181  QEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRR 240
            +E  +M  +PY+SAVGSLMYAM+CTRPDI ++VG+VSR+  NPG++HW AVK IL+YLR 
Sbjct: 1101 EEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160

Query: 241  TKDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTM 300
            T    L +G  D IL GYTD+D   D D RKS++G +FT +GGA+ W+S  Q C+A ST 
Sbjct: 1161 TTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTT 1220

Query: 301  EAEYVAACEAAKE 313
            EAEY+AA E  KE
Sbjct: 1221 EAEYIAATETGKE 1233

[Close]

BLAST of CSPI03G24810 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 195.7 bits (496), Expect = 8.0e-49
Identity = 121/325 (37.23%), Postives = 187/325 (57.54%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            MDVKTAFLNG L+E IYM  P+G         VCKL K+IYGLKQA+R W   F+ A+K 
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1060

Query: 61   YGFEQNVDEPCVY---KKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDL 120
              F  +  + C+Y   K  +N  I +++LYVDD+++   D+  + + K++L  +F+M DL
Sbjct: 1061 CEFVNSSVDRCIYILDKGNINENI-YVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDL 1120

Query: 121  GDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLP----YRYGIHLSKE 180
             + ++ +GI+I    +   + +SQ++Y+ K+LS++ M+N      P      Y +  S E
Sbjct: 1121 NEIKHFIGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDE 1180

Query: 181  QCPKTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNI 240
             C           N P  S +G LMY MLCTRPD+  +V ++SRY S    + W  +K +
Sbjct: 1181 DC-----------NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRV 1240

Query: 241  LKYLRRTKDYMLMYGTKDLI----LTGYTDSDFQTDKDARKSTSGSVFTL-NGGAVVWRS 300
            L+YL+ T D  L++  K+L     + GY DSD+   +  RKST+G +F + +   + W +
Sbjct: 1241 LRYLKGTIDMKLIF-KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNT 1300

Query: 301  IKQTCIADSTMEAEYVAACEAAKEA 314
             +Q  +A S+ EAEY+A  EA +EA
Sbjct: 1301 KRQNSVAASSTEAEYMALFEAVREA 1308

[Close]

BLAST of CSPI03G24810 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 1.8e-45
Identity = 110/313 (35.14%), Postives = 166/313 (53.04%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            +DV  AFL G L + +YMSQP GF+++D+   VC+L+K+IYGLKQA R+W +   T + +
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
             GF  ++ +  ++       I ++++YVDDIL+ GND   L      L+ +F +K+  D 
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
             Y LGI+    R  + L +SQ  Y   +L+R  M  +K    P      L+     K P 
Sbjct: 1167 HYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPD 1226

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
              E      Y   VGSL Y +  TRPD+ Y+V  +S+Y   P  DHW A+K +L+YL  T
Sbjct: 1227 PTE------YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGT 1286

Query: 241  KDY-MLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTM 300
             D+ + +     L L  Y+D+D+  D D   ST+G +  L    + W S KQ  +  S+ 
Sbjct: 1287 PDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1346

Query: 301  EAEYVAACEAAKE 313
            EAEY +    + E
Sbjct: 1347 EAEYRSVANTSSE 1350

[Close]

BLAST of CSPI03G24810 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 8.6e-43
Identity = 111/313 (35.46%), Postives = 165/313 (52.72%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            +DV  AFL G L + +YMSQP GFI++D+   VCKL+K++YGLKQA R+W +     + +
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
             GF  +V +  ++       I ++++YVDDIL+ GND   L +    L+ +F +KD  + 
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
             Y LGI+    R    L +SQ  YI  +L+R  M  +K    P      LS     K   
Sbjct: 1184 HYFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTD 1243

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
              E      Y   VGSL Y +  TRPDI Y+V  +S++   P  +H  A+K IL+YL  T
Sbjct: 1244 PTE------YRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGT 1303

Query: 241  KDY-MLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTM 300
             ++ + +     L L  Y+D+D+  DKD   ST+G +  L    + W S KQ  +  S+ 
Sbjct: 1304 PNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSST 1363

Query: 301  EAEYVAACEAAKE 313
            EAEY +    + E
Sbjct: 1364 EAEYRSVANTSSE 1367

[Close]

BLAST of CSPI03G24810 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-34
Identity = 103/314 (32.80%), Postives = 149/314 (47.45%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
           MDV TAFLN  ++E IY+ QP GF+ +     V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 61  YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
            GF ++  E  +Y +  +    ++ +YVDD+L+          +K+ L   + MKDLG  
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 121 QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
              LG+ I     N  + +S   YI K  S  ++   K    P    +  SK     T  
Sbjct: 121 DKFLGLNI-HQSSNGDITLSLQDYIAKAASESEINTFKLTQTP----LCNSKPLFETTSP 180

Query: 181 EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
            ++D+   PY S VG L++     RPDI Y V ++SR+   P   H  + + +L+YL  T
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 241 KDYMLMYGT-KDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIK-QTCIADST 300
           +   L Y +   L LT Y D+      D   ST G V  L G  V W S K +  I   +
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 301 MEAEYVAACEAAKE 313
            EAEY+ A E   E
Sbjct: 301 TEAEYITASETVME 307

[Close]

BLAST of CSPI03G24810 vs. ExPASy TrEMBL
Match: E2GK51 (Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 1.4e-165
Identity = 288/313 (92.01%), Postives = 306/313 (97.76%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            MDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYGLKQASRSWNIRFDTAIKS
Sbjct: 915  MDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKS 974

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
            YGFEQNVDEPCVYKK+VNS++AFL+LYVDDILLIGNDV YLTD+KKWL  QFQMKDLG+A
Sbjct: 975  YGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEA 1034

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
            QY+LGIQIVRNRKNKTLAMSQASYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPKTPQ
Sbjct: 1035 QYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQ 1094

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
            EVEDMRNIPY+SAVGSLMYAMLCTRPDICYSVG+VSRYQSNPGRDHWTAVKNILKYLRRT
Sbjct: 1095 EVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRT 1154

Query: 241  KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
            ++YML+YG KDLILTGYTDSDFQ+DKDARKSTSGSVFTLNGGAVVWRS+KQTCIADSTME
Sbjct: 1155 RNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTME 1214

Query: 301  AEYVAACEAAKEA 314
            AEYVAACEAAKEA
Sbjct: 1215 AEYVAACEAAKEA 1227

[Close]

BLAST of CSPI03G24810 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 7.0e-157
Identity = 275/313 (87.86%), Postives = 296/313 (94.57%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            MDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKS
Sbjct: 823  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 882

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
            YGF+QNVDEPCVYKK+    +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+A
Sbjct: 883  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 942

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
            QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQ
Sbjct: 943  QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 1002

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
            EVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK +LKYLRRT
Sbjct: 1003 EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRT 1062

Query: 241  KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
            +DYML+YG KDLILTGYTDSDFQTDKD+RKSTSGSVFTLNGGAVVWRSIKQ CIADSTME
Sbjct: 1063 RDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1122

Query: 301  AEYVAACEAAKEA 314
            AEYVAACEAAKEA
Sbjct: 1123 AEYVAACEAAKEA 1135

[Close]

BLAST of CSPI03G24810 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 7.0e-157
Identity = 275/313 (87.86%), Postives = 296/313 (94.57%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            MDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKS
Sbjct: 697  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 756

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
            YGF+QNVDEPCVYKK+    +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+A
Sbjct: 757  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 816

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
            QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQ
Sbjct: 817  QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 876

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
            EVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK +LKYLRRT
Sbjct: 877  EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRT 936

Query: 241  KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
            +DYML+YG KDLILTGYTDSDFQTDKD+RKSTSGSVFTLNGGAVVWRSIKQ CIADSTME
Sbjct: 937  RDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 996

Query: 301  AEYVAACEAAKEA 314
            AEYVAACEAAKEA
Sbjct: 997  AEYVAACEAAKEA 1009

[Close]

BLAST of CSPI03G24810 vs. ExPASy TrEMBL
Match: A0A5D3BX45 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00740 PE=4 SV=1)

HSP 1 Score: 560.1 bits (1442), Expect = 6.0e-156
Identity = 276/313 (88.18%), Postives = 293/313 (93.61%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
           MDVKT FLN NLEESIYM QPE FI++ QEQK+CKL+KSIYGLKQASRS NIRFDTAIKS
Sbjct: 339 MDVKTTFLNANLEESIYMVQPERFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKS 398

Query: 61  YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
           YG EQNVDEPCVYK+++NS +AFLVLYVDDILLIGNDVG+L DIKKWLAMQFQMKDLG+A
Sbjct: 399 YGLEQNVDEPCVYKRIMNSTVAFLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNA 458

Query: 121 QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
           QYVLG+QIVRNRKNKTLAMSQ SYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQ
Sbjct: 459 QYVLGVQIVRNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQ 518

Query: 181 EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
           EVEDM NIPYASAVGSLMY MLCTRP+ICYSVG+VSR QS PGRDHWT VKNILKYLRRT
Sbjct: 519 EVEDMSNIPYASAVGSLMYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNILKYLRRT 578

Query: 241 KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
           KDYML+YG+KDLILTGYTD  FQTDKDARKSTSG VFT+NGGAVVWRSIKQ+CIADSTME
Sbjct: 579 KDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNGGAVVWRSIKQSCIADSTME 638

Query: 301 AEYVAACEAAKEA 314
           AEYVA CEAAKEA
Sbjct: 639 AEYVATCEAAKEA 651

[Close]

BLAST of CSPI03G24810 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 557.0 bits (1434), Expect = 5.0e-155
Identity = 273/313 (87.22%), Postives = 294/313 (93.93%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            MDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKS
Sbjct: 823  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 882

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
            YGF+QNVDEPCVYKK+    +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+ 
Sbjct: 883  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEG 942

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
            QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQ
Sbjct: 943  QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 1002

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
            EVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK ILKYLRRT
Sbjct: 1003 EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRT 1062

Query: 241  KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
            +DYML+YG KDLILTGYT+SDFQTDKD+RKSTS SVFTLNGGAVVWRSIKQ CIADSTME
Sbjct: 1063 RDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTME 1122

Query: 301  AEYVAACEAAKEA 314
            AEYVAACEAAKEA
Sbjct: 1123 AEYVAACEAAKEA 1135

[Close]

BLAST of CSPI03G24810 vs. NCBI nr
Match: ADJ18449.1 (gag/pol protein, partial [Bryonia dioica])

HSP 1 Score: 592.0 bits (1525), Expect = 2.9e-165
Identity = 288/313 (92.01%), Postives = 306/313 (97.76%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            MDVKTAFLNGNLEESIYM QPEGFI QDQEQKVCKL+KSIYGLKQASRSWNIRFDTAIKS
Sbjct: 915  MDVKTAFLNGNLEESIYMVQPEGFIAQDQEQKVCKLQKSIYGLKQASRSWNIRFDTAIKS 974

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
            YGFEQNVDEPCVYKK+VNS++AFL+LYVDDILLIGNDV YLTD+KKWL  QFQMKDLG+A
Sbjct: 975  YGFEQNVDEPCVYKKIVNSVVAFLILYVDDILLIGNDVEYLTDVKKWLNTQFQMKDLGEA 1034

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
            QY+LGIQIVRNRKNKTLAMSQASYIDK+LSRYKMQNSKKG LP+R+GIHLSKEQCPKTPQ
Sbjct: 1035 QYILGIQIVRNRKNKTLAMSQASYIDKVLSRYKMQNSKKGQLPFRHGIHLSKEQCPKTPQ 1094

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
            EVEDMRNIPY+SAVGSLMYAMLCTRPDICYSVG+VSRYQSNPGRDHWTAVKNILKYLRRT
Sbjct: 1095 EVEDMRNIPYSSAVGSLMYAMLCTRPDICYSVGIVSRYQSNPGRDHWTAVKNILKYLRRT 1154

Query: 241  KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
            ++YML+YG KDLILTGYTDSDFQ+DKDARKSTSGSVFTLNGGAVVWRS+KQTCIADSTME
Sbjct: 1155 RNYMLVYGAKDLILTGYTDSDFQSDKDARKSTSGSVFTLNGGAVVWRSVKQTCIADSTME 1214

Query: 301  AEYVAACEAAKEA 314
            AEYVAACEAAKEA
Sbjct: 1215 AEYVAACEAAKEA 1227

[Close]

BLAST of CSPI03G24810 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 563.1 bits (1450), Expect = 1.5e-156
Identity = 275/313 (87.86%), Postives = 296/313 (94.57%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            MDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKS
Sbjct: 823  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 882

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
            YGF+QNVDEPCVYKK+    +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+A
Sbjct: 883  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 942

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
            QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQ
Sbjct: 943  QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 1002

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
            EVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK +LKYLRRT
Sbjct: 1003 EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRT 1062

Query: 241  KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
            +DYML+YG KDLILTGYTDSDFQTDKD+RKSTSGSVFTLNGGAVVWRSIKQ CIADSTME
Sbjct: 1063 RDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 1122

Query: 301  AEYVAACEAAKEA 314
            AEYVAACEAAKEA
Sbjct: 1123 AEYVAACEAAKEA 1135

[Close]

BLAST of CSPI03G24810 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 563.1 bits (1450), Expect = 1.5e-156
Identity = 275/313 (87.86%), Postives = 296/313 (94.57%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            MDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKS
Sbjct: 697  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 756

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
            YGF+QNVDEPCVYKK+    +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+A
Sbjct: 757  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEA 816

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
            QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQ
Sbjct: 817  QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 876

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
            EVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK +LKYLRRT
Sbjct: 877  EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRT 936

Query: 241  KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
            +DYML+YG KDLILTGYTDSDFQTDKD+RKSTSGSVFTLNGGAVVWRSIKQ CIADSTME
Sbjct: 937  RDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTME 996

Query: 301  AEYVAACEAAKEA 314
            AEYVAACEAAKEA
Sbjct: 997  AEYVAACEAAKEA 1009

[Close]

BLAST of CSPI03G24810 vs. NCBI nr
Match: TYK03644.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 560.1 bits (1442), Expect = 1.2e-155
Identity = 276/313 (88.18%), Postives = 293/313 (93.61%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
           MDVKT FLN NLEESIYM QPE FI++ QEQK+CKL+KSIYGLKQASRS NIRFDTAIKS
Sbjct: 339 MDVKTTFLNANLEESIYMVQPERFIQKGQEQKICKLQKSIYGLKQASRSCNIRFDTAIKS 398

Query: 61  YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
           YG EQNVDEPCVYK+++NS +AFLVLYVDDILLIGNDVG+L DIKKWLAMQFQMKDLG+A
Sbjct: 399 YGLEQNVDEPCVYKRIMNSTVAFLVLYVDDILLIGNDVGHLADIKKWLAMQFQMKDLGNA 458

Query: 121 QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
           QYVLG+QIVRNRKNKTLAMSQ SYIDKMLSRYKM NSKKGLLPYRYGIHLSKEQCPKTPQ
Sbjct: 459 QYVLGVQIVRNRKNKTLAMSQTSYIDKMLSRYKMHNSKKGLLPYRYGIHLSKEQCPKTPQ 518

Query: 181 EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
           EVEDM NIPYASAVGSLMY MLCTRP+ICYSVG+VSR QS PGRDHWT VKNILKYLRRT
Sbjct: 519 EVEDMSNIPYASAVGSLMYVMLCTRPNICYSVGIVSRCQSKPGRDHWTTVKNILKYLRRT 578

Query: 241 KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
           KDYML+YG+KDLILTGYTD  FQTDKDARKSTSG VFT+NGGAVVWRSIKQ+CIADSTME
Sbjct: 579 KDYMLVYGSKDLILTGYTDFYFQTDKDARKSTSGLVFTMNGGAVVWRSIKQSCIADSTME 638

Query: 301 AEYVAACEAAKEA 314
           AEYVA CEAAKEA
Sbjct: 639 AEYVATCEAAKEA 651

[Close]

BLAST of CSPI03G24810 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 557.0 bits (1434), Expect = 1.0e-154
Identity = 273/313 (87.22%), Postives = 294/313 (93.93%), Query Frame = 0


Query: 1    MDVKTAFLNGNLEESIYMSQPEGFIEQDQEQKVCKLKKSIYGLKQASRSWNIRFDTAIKS 60
            MDVKTAFLNGNLEESI+MSQPEGFI Q QEQKVCKL +SIYGLKQASRSWNIRFDTAIKS
Sbjct: 823  MDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKS 882

Query: 61   YGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDA 120
            YGF+QNVDEPCVYKK+    +AFLVLYVDDILLIGNDVGYLTD+K WLA QFQMKDLG+ 
Sbjct: 883  YGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEG 942

Query: 121  QYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCPKTPQ 180
            QYVLGIQI+R+RKNKTLA+SQA+YIDK+L RY MQNSKKGLLP+R+G+HLSKEQ PKTPQ
Sbjct: 943  QYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQ 1002

Query: 181  EVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRT 240
            EVEDMR IPYASAVGSLMYAMLCTRPDICY+VG+VSRYQSNPG DHWTAVK ILKYLRRT
Sbjct: 1003 EVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIILKYLRRT 1062

Query: 241  KDYMLMYGTKDLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTME 300
            +DYML+YG KDLILTGYT+SDFQTDKD+RKSTS SVFTLNGGAVVWRSIKQ CIADSTME
Sbjct: 1063 RDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVWRSIKQGCIADSTME 1122

Query: 301  AEYVAACEAAKEA 314
            AEYVAACEAAKEA
Sbjct: 1123 AEYVAACEAAKEA 1135

[Close]

BLAST of CSPI03G24810 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 164.1 bits (414), Expect = 1.8e-40
Identity = 102/317 (32.18%), Postives = 168/317 (53.00%), Query Frame = 0


Query: 1   MDVKTAFLNGNLEESIYMSQPEGFIEQDQE----QKVCKLKKSIYGLKQASRSWNIRFDT 60
           +D+  AFLNG+L+E IYM  P G+  +  +      VC LKKSIYGLKQASR W ++F  
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  AIKSYGFEQNVDEPCVYKKVVNSIIAFLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKD 120
            +  +GF Q+  +   + K+  ++   +++YVDDI++  N+   + ++K  L   F+++D
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 LGDAQYVLGIQIVRNRKNKTLAMSQASYIDKMLSRYKMQNSKKGLLPYRYGIHLSKEQCP 180
           LG  +Y LG++I R+     + + Q  Y   +L    +   K   +P    +  S     
Sbjct: 313 LGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH--- 372

Query: 181 KTPQEVEDMRNIPYASAVGSLMYAMLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKY 240
            +  +  D +   Y   +G LMY  + TR DI ++V  +S++   P   H  AV  IL Y
Sbjct: 373 -SGGDFVDAK--AYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHY 432

Query: 241 LRRTKDYMLMYGTK-DLILTGYTDSDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIA 300
           ++ T    L Y ++ ++ L  ++D+ FQ+ KD R+ST+G    L    + W+S KQ  ++
Sbjct: 433 IKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVS 492

Query: 301 DSTMEAEYVAACEAAKE 313
            S+ EAEY A   A  E
Sbjct: 493 KSSAEAEYRALSFATDE 500

[Close]

BLAST of CSPI03G24810 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 5.2e-19
Identity = 74/233 (31.76%), Postives = 116/233 (49.79%), Query Frame = 0


Query: 83  FLVLYVDDILLIGNDVGYLTDIKKWLAMQFQMKDLGDAQYVLGIQIVRNRKNKTLAMSQA 142
           +L+LYVDDILL G+    L  +   L+  F MKDLG   Y LGIQI  +     L +SQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQT 61

Query: 143 SYIDKMLSRYKMQNSK--KGLLPYRYGIHLSKEQCPKTPQEVEDMRNIPYASAVGSLMYA 202
            Y +++L+   M + K     LP +    +S  + P    +  D R+I     VG+L Y 
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP----DPSDFRSI-----VGALQYL 121

Query: 203 MLCTRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDY-MLMYGTKDLILTGYTD 262
            L TRPDI Y+V +V +    P    +  +K +L+Y++ T  + + ++    L +  + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 263 SDFQTDKDARKSTSGSVFTLNGGAVVWRSIKQTCIADSTMEAEYVAACEAAKE 313
           SD+      R+ST+G    L    + W + +Q  ++ S+ E EY A    A E
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAE 222

[Close]

BLAST of CSPI03G24810 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 45.4 bits (106), Expect = 9.5e-05
Identity = 25/72 (34.72%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 204 TRPDICYSVGMVSRYQSNPGRDHWTAVKNILKYLRRTKDYMLMY-GTKDLILTGYTDSDF 263
           TRPD+ ++V  +S++ S        AV  +L Y++ T    L Y  T DL L  + DSD+
Sbjct: 6   TRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFADSDW 65

Query: 264 QTDKDARKSTSG 275
            +  D R+S +G
Sbjct: 66  ASCPDTRRSVTG 77

The following BLAST results are available for this feature:

BLAST of CSPI03G24810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	2.2e-86	51.44	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	8.0e-49	37.23	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.8e-45	35.14	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	8.6e-43	35.46	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	1.5e-34	32.80	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of CSPI03G24810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E2GK51	1.4e-165	92.01	Gag/pol protein (Fragment) OS=Bryonia dioica OX=3652 PE=4 SV=1	[more]
A0A5A7TZD0	7.0e-157	87.86	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7UYE8	7.0e-157	87.86	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5D3BX45	6.0e-156	88.18	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G007...	[more]
A0A5A7T2V9	5.0e-155	87.22	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]

BLAST of CSPI03G24810 vs. NCBI nr


Match Name	E-value	Identity	Description
ADJ18449.1	2.9e-165	92.01	gag/pol protein, partial [Bryonia dioica]	[more]
KAA0025945.1	1.5e-156	87.86	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0059226.1	1.5e-156	87.86	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK03644.1	1.2e-155	88.18	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035907.1	1.0e-154	87.22	gag/pol protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI03G24810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.8e-40	32.18	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.2e-19	31.76	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	9.5e-05	34.72	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..163 e-value: 2.5E-42 score: 145.2
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 1..247
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 255..313 e-value: 8.40016E-29 score: 106.013
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..310

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G24810.1	CSPI03G24810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding