CSPI03G24350 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G24350
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	pleiotropic drug resistance protein 3-like
Location	Chr3: 21437474 .. 21439291 (+)
RNA-Seq Expression	CSPI03G24350
Synteny	CSPI03G24350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTGATGTTGAAGATGACAATTACTTCATGGTAGCCCTTTTTTTTGCTCTCGTTTTACTTCTTGTTGATGGGTTTCCAGAATTGGTTATGGCTATTCAAAGAGTTGAAGTTTTCTATAAACAAAAACAGTTCTATTTCTACCCAGCTTGGGCCTATGCTATGCTATTCCAGCTTAATCAAGATCCCTCTTTCCCTCGTCGAATCTTTAGTTTGGACTTCTCTTACTCACTACGTTATTGGCTTCACCCCTCAACCTATCAGGTTAGTTTTCATGAACTCTTTAGTTTTGTAACCATTCTCAAAATGCCATAATTTGGATTAAACGCTTAGAACTTCTTTTCTTTTTTCTTTTTTAATTTTTGGTTATAGGTTCTAATTTATTATTCTGTTTGGGGTGCATTTATCAGCATTGTCCCTGTTTAGAATGATAGCTTAGCTTCAATCTTCCAAAGCAATGGTGCTTCCTTTACAGTAGGCAATTTGTAAGTTATGGAGAAATTGATGCTTCAATAAGTTATGGAGAAATTGGCCTTTCTCTCAATGAATTAAATTGTTTATGTGCAGTTTATTACTTACACCACTTGCCAATAGCAGATGGATGGGTAAGAACTCTTTCCTCTCTTGATCATATTGAACTAATATCTGCTGTCTTTTATTTATTGATCCTCTTGTTAAACCAAATCCTTGCCAATCATACGTTTCATTTCTCCCGCAGTATGATATTAAAGCATCATAGAGAGAGTTTGATTTTCAATTTTTTGAATTATGCAACATCCATGCTAGCTTGGTTGAATTGGGGTTTTTGGGTTTCACCAATAAGTTATGGAGAAATTGGCCTTTCTCTCAATGAATTAAATTGTTTATGTGCAGTTTATTACTTACACCACTTGCCAATAGCAGATGGATGGGTAAGAACTCTTTCCTCTCTTGATCATATTGAACTAATATCTGCTGTCTTTTATTTATTGATCCTCTTGTTAAACCAAATCCTGACATGATAGGGGCATTATGGTTTTATTTATTTCCTTCAGCGAGGGCCTCCCTCTTATTTCCCTTATAAATGACACATTTCATGTGCTTTTTTTTGCCTTAGCATTCATAAGCATCATCTTTCTCTTAAGAATTTGTTTACCCTGAAAACAAAACCAACAAAAAGGTTATAGCAGGAAAATGAACATAGGATCCATGAATTTGCGTTTATAAATCTAGGATGAATTCTCAATAGGTACACAAAAATACTGTAGAAATTGCATTCTTACATCGCCTTCGATGCTTGGAATATGTTTCATCTTTAGTGAAGACAAAAAGTGTCCATAAGATCTATGGATTGGAACAATATCTTTGTACATACCACTACAACTTTGATTTCTATTTTCTCCCATGCAGAAGAGAGAGACTCGTTTAGAAATGGTTGGAAACGTTTTTCGAAAAATTTCAATGTGGATTAGCATAATTTAGTACTCTTGATCTGAAATTTACTTCACAATACATGTGCATATATGTCCCAAATAAATAAGTGTTGAGTGTTGTGGAAGTTTTATAACTTGTTTTGTATAATTCTTTTAGATATCATGATTGCACTTGTGGAAATTCTGCATTTTTTGTGACATAGTTTGTTTTTTTTTTTTGTGGAGATTTAGAATGATTTTGATCACATGGTTATATTGATACAATATGTAGTTTATTGAAAATGGACTTGAAGGAGATGTCGAATCTGACGGTGAAGAAGATGAAATGGAGGACACTGATGGTGTAGAAGTGGAACATCTACACATTTCAGATTACCAAGGTTTTGCACTAATATTCGATTGA

mRNA sequence

ATGGAAATTGATGTTGAAGATGACAATTACTTCATGGTAGCCCTTTTTTTTGCTCTCGTTTTACTTCTTGTTGATGGGTTTCCAGAATTGGTTATGGCTATTCAAAGAGTTGAAGTTTTCTATAAACAAAAACAGTTCTATTTCTACCCAGCTTGGGCCTATGCTATGCTATTCCAGCTTAATCAAGATCCCTCTTTCCCTCGTCGAATCTTTAGTTTGGACTTCTCTTACTCACTACGTTATTGGCTTCACCCCTCAACCTATCAGCTTAGCTTCAATCTTCCAAAGCAATGGTGCTTCCTTTACAGTAGGCAATTTGTAAGTTATGGAGAAATTGATGCTTCAATAAGTTATGGAGAAATTGGCCTTTCTCTCAATGAATTAAATTGTTTATGTGCAGTTTATTACTTACACCACTTGCCAATAGCAGATGGATGGTTTATTGAAAATGGACTTGAAGGAGATGTCGAATCTGACGGTGAAGAAGATGAAATGGAGGACACTGATGGTGTAGAAGTGGAACATCTACACATTTCAGATTACCAAGGTTTTGCACTAATATTCGATTGA

Coding sequence (CDS)

ATGGAAATTGATGTTGAAGATGACAATTACTTCATGGTAGCCCTTTTTTTTGCTCTCGTTTTACTTCTTGTTGATGGGTTTCCAGAATTGGTTATGGCTATTCAAAGAGTTGAAGTTTTCTATAAACAAAAACAGTTCTATTTCTACCCAGCTTGGGCCTATGCTATGCTATTCCAGCTTAATCAAGATCCCTCTTTCCCTCGTCGAATCTTTAGTTTGGACTTCTCTTACTCACTACGTTATTGGCTTCACCCCTCAACCTATCAGCTTAGCTTCAATCTTCCAAAGCAATGGTGCTTCCTTTACAGTAGGCAATTTGTAAGTTATGGAGAAATTGATGCTTCAATAAGTTATGGAGAAATTGGCCTTTCTCTCAATGAATTAAATTGTTTATGTGCAGTTTATTACTTACACCACTTGCCAATAGCAGATGGATGGTTTATTGAAAATGGACTTGAAGGAGATGTCGAATCTGACGGTGAAGAAGATGAAATGGAGGACACTGATGGTGTAGAAGTGGAACATCTACACATTTCAGATTACCAAGGTTTTGCACTAATATTCGATTGA

Protein sequence

MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAMLFQLNQDPSFPRRIFSLDFSYSLRYWLHPSTYQLSFNLPKQWCFLYSRQFVSYGEIDASISYGEIGLSLNELNCLCAVYYLHHLPIADGWFIENGLEGDVESDGEEDEMEDTDGVEVEHLHISDYQGFALIFD*

Homology

[Close]

BLAST of CSPI03G24350 vs. ExPASy Swiss-Prot
Match: Q9LFH0 (ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 2.5e-13
Identity = 56/138 (40.58%), Postives = 73/138 (52.90%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAMLFQL 60
           M ID+   N +M ALFFAL++LLVDGFPEL M  QR+ VFYKQKQ  FYPAWAYA+   +
Sbjct: 568 MGIDIIHGNSYMSALFFALIILLVDGFPELSMTAQRLAVFYKQKQLCFYPAWAYAIPATV 627

Query: 61  NQDPSFPRRIFSLDFSYSLRYWLHPSTYQLSF-----NLPKQWCFLYSRQFVS------- 120
            + P        L F  SL  W   S Y + +        KQ+  L++  F S       
Sbjct: 628 LKVP--------LSFFESL-VWTCLSYYVIGYTPEASRFFKQFILLFAVHFTSISMFRCL 687

Query: 121 ---YGEIDASISYGEIGL 124
              +  + ASI+ G  G+
Sbjct: 688 AAIFQTVVASITAGSFGI 696

[Close]

BLAST of CSPI03G24350 vs. ExPASy Swiss-Prot
Match: Q9ZUT8 (ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.8e-12
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           M+ID+   N +M  LFFA V+LLVDG PEL M +QR+ VFYKQKQ  FYPAWAYA+
Sbjct: 533 MDIDIIHGNSYMSCLFFATVVLLVDGIPELSMTVQRLSVFYKQKQLCFYPAWAYAI 588

[Close]

BLAST of CSPI03G24350 vs. ExPASy Swiss-Prot
Match: Q8GU83 (ABC transporter G family member 41 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG41 PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.6e-12
Identity = 33/56 (58.93%), Postives = 46/56 (82.14%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           M +D    +Y+M +LF+AL+LLLV+GFPEL +A+ R+ VFYKQ+ +YFYPAWAYA+
Sbjct: 553 MGVDRAHADYYMGSLFYALILLLVNGFPELAIAVSRLPVFYKQRDYYFYPAWAYAI 608

[Close]

BLAST of CSPI03G24350 vs. ExPASy Swiss-Prot
Match: Q5W274 (Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 2.4e-11
Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           M+ D+   NY++ ALF+AL++LLVDGFPEL M I R+ VFYKQ +  FYPAWAY +
Sbjct: 566 MDTDLVHANYYLGALFYALIILLVDGFPELSMTITRLAVFYKQSELCFYPAWAYTI 621

[Close]

BLAST of CSPI03G24350 vs. ExPASy Swiss-Prot
Match: Q2QV81 (ABC transporter G family member 49 OS=Oryza sativa subsp. japonica OX=39947 GN=ABCG49 PE=2 SV=3)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 30/53 (56.60%), Postives = 41/53 (77.36%), Query Frame = 0


Query: 4   DVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           D+   NY+M +LF+AL+LL+V+G PELVM+I R+ VFYK +  Y YP WAYA+
Sbjct: 609 DIVSANYYMGSLFYALILLMVNGIPELVMSISRLPVFYKHRDHYLYPGWAYAI 661

[Close]

BLAST of CSPI03G24350 vs. ExPASy TrEMBL
Match: A0A0A0LTH3 (ABC2_membrane domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G190180 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.9e-20
Identity = 54/64 (84.38%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 1  MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAMLFQL 60
          M+IDVEDDNYFMVALFFAL+LLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAY     L
Sbjct: 1  MDIDVEDDNYFMVALFFALILLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYLCYSSL 60

Query: 61 NQDP 65
           + P
Sbjct: 61 IKIP 64

[Close]

BLAST of CSPI03G24350 vs. ExPASy TrEMBL
Match: A0A0A0LBH1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814320 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 3.5e-18
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           MEID+ED NYFM ALFFAL+LLLVDGFPELVM IQR+EVFYKQKQFYFYPAWAYA+
Sbjct: 567 MEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQFYFYPAWAYAI 622

[Close]

BLAST of CSPI03G24350 vs. ExPASy TrEMBL
Match: A0A5A7UFY6 (Pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006020 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-17
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           MEID+ED NYFM ALFFAL+LLLVDGFPELVM IQR+EVFYKQKQ YFYPAWAYA+
Sbjct: 561 MEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQLYFYPAWAYAI 616

[Close]

BLAST of CSPI03G24350 vs. ExPASy TrEMBL
Match: A0A1S3B6X0 (pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486825 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-17
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           MEID+ED NYFM ALFFAL+LLLVDGFPELVM IQR+EVFYKQKQ YFYPAWAYA+
Sbjct: 573 MEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQLYFYPAWAYAI 628

[Close]

BLAST of CSPI03G24350 vs. ExPASy TrEMBL
Match: A0A1S3B7C4 (pleiotropic drug resistance protein 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103486825 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.7e-17
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           MEID+ED NYFM ALFFAL+LLLVDGFPELVM IQR+EVFYKQKQ YFYPAWAYA+
Sbjct: 387 MEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQLYFYPAWAYAI 442

[Close]

BLAST of CSPI03G24350 vs. NCBI nr
Match: KAE8649455.1 (hypothetical protein Csa_018878 [Cucumis sativus])

HSP 1 Score: 174.9 bits (442), Expect = 6.8e-40
Identity = 104/184 (56.52%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQK---QFYFYPAWAYAML 60
           M+IDVEDDNYFMVALF      L+ GF   +   + ++    +         P   Y+ L
Sbjct: 1   MDIDVEDDNYFMVALFLLSFYFLLMGFQNWLWLFKELKFSINKNSSISTQLGPMLCYSSL 60

Query: 61  FQLNQDPSFPRRIFSLDFSYSLRYWLHPSTYQLSFNLPKQWCFLYSRQFVSYGEIDASIS 120
            ++            L    SL  W   + Y + F  P+      SRQFVSYGEIDASIS
Sbjct: 61  IKI-----------PLSLVESL-VWTSLTHYVIGFT-PQP----ISRQFVSYGEIDASIS 120

Query: 121 YGEIGLSLNELNCLCAVYYLHHLPIADGWFIENGLEGDVESDGEEDEMEDTDGVEVEHLH 180
           YGEIGLSLNELNCLCAVYYLHHLPIAD WFIENGLEGD +SDGEEDEMEDTDGVEVEHLH
Sbjct: 121 YGEIGLSLNELNCLCAVYYLHHLPIADRWFIENGLEGDADSDGEEDEMEDTDGVEVEHLH 167

Query: 181 ISDY 182
           ISDY
Sbjct: 181 ISDY 167

[Close]

BLAST of CSPI03G24350 vs. NCBI nr
Match: XP_031740704.1 (uncharacterized protein LOC116403552 isoform X1 [Cucumis sativus] >KAE8652876.1 hypothetical protein Csa_013031 [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 1.5e-23
Identity = 81/164 (49.39%), Postives = 94/164 (57.32%), Query Frame = 0


Query: 32  MAIQRVEVFYKQKQFYFYPAWAYAMLFQLNQDPSFPRRIFSLDFSYSLRYWLHPSTYQLS 91
           MAIQRVEVFYKQKQFYFYPAWAY     L + P        L    SL  W   + Y + 
Sbjct: 1   MAIQRVEVFYKQKQFYFYPAWAYLCYSSLIKIP--------LSLGESL-VWTSLTHYVIG 60

Query: 92  FNLPKQWCFLY----SRQFVSYGEIDASISYGEIGLSLNELNCLCAVYYLHHLPIADGW- 151
           F  P+    L     +R+++ + E+  +IS   I L L++  C               W 
Sbjct: 61  FT-PQPISLLLTPLANRRWMDFKELKITISEILISLELSQECC-------------GSWR 120

Query: 152 -FIENGLEGDVESDGEEDEMEDTDGVEVEHLHISDYQGFALIFD 190
            FIE GLEGD  SDGEEDEMEDTD VEVEHLHISDYQGFALIFD
Sbjct: 121 RFIEIGLEGDANSDGEEDEMEDTDDVEVEHLHISDYQGFALIFD 141

[Close]

BLAST of CSPI03G24350 vs. NCBI nr
Match: XP_011652141.2 (pleiotropic drug resistance protein 3 [Cucumis sativus] >KGN59512.2 hypothetical protein Csa_002232 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 7.3e-18
Identity = 49/56 (87.50%), Postives = 53/56 (94.64%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           MEID+ED NYFM ALFFAL+LLLVDGFPELVM IQR+EVFYKQKQFYFYPAWAYA+
Sbjct: 567 MEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQFYFYPAWAYAI 622

[Close]

BLAST of CSPI03G24350 vs. NCBI nr
Match: XP_008443151.1 (PREDICTED: pleiotropic drug resistance protein 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 99.4 bits (246), Expect = 3.6e-17
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           MEID+ED NYFM ALFFAL+LLLVDGFPELVM IQR+EVFYKQKQ YFYPAWAYA+
Sbjct: 387 MEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQLYFYPAWAYAI 442

[Close]

BLAST of CSPI03G24350 vs. NCBI nr
Match: XP_008443150.1 (PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 99.4 bits (246), Expect = 3.6e-17
Identity = 48/56 (85.71%), Postives = 52/56 (92.86%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           MEID+ED NYFM ALFFAL+LLLVDGFPELVM IQR+EVFYKQKQ YFYPAWAYA+
Sbjct: 573 MEIDIEDGNYFMGALFFALILLLVDGFPELVMTIQRLEVFYKQKQLYFYPAWAYAI 628

[Close]

BLAST of CSPI03G24350 vs. TAIR 10
Match: AT3G53480.1 (pleiotropic drug resistance 9 )

HSP 1 Score: 77.0 bits (188), Expect = 1.8e-14
Identity = 56/138 (40.58%), Postives = 73/138 (52.90%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAMLFQL 60
           M ID+   N +M ALFFAL++LLVDGFPEL M  QR+ VFYKQKQ  FYPAWAYA+   +
Sbjct: 568 MGIDIIHGNSYMSALFFALIILLVDGFPELSMTAQRLAVFYKQKQLCFYPAWAYAIPATV 627

Query: 61  NQDPSFPRRIFSLDFSYSLRYWLHPSTYQLSF-----NLPKQWCFLYSRQFVS------- 120
            + P        L F  SL  W   S Y + +        KQ+  L++  F S       
Sbjct: 628 LKVP--------LSFFESL-VWTCLSYYVIGYTPEASRFFKQFILLFAVHFTSISMFRCL 687

Query: 121 ---YGEIDASISYGEIGL 124
              +  + ASI+ G  G+
Sbjct: 688 AAIFQTVVASITAGSFGI 696

[Close]

BLAST of CSPI03G24350 vs. TAIR 10
Match: AT2G37280.1 (pleiotropic drug resistance 5 )

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-13
Identity = 36/56 (64.29%), Postives = 43/56 (76.79%), Query Frame = 0


Query: 1   MEIDVEDDNYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           M+ID+   N +M  LFFA V+LLVDG PEL M +QR+ VFYKQKQ  FYPAWAYA+
Sbjct: 533 MDIDIIHGNSYMSCLFFATVVLLVDGIPELSMTVQRLSVFYKQKQLCFYPAWAYAI 588

[Close]

BLAST of CSPI03G24350 vs. TAIR 10
Match: AT4G15233.1 (ABC-2 and Plant PDR ABC-type transporter family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-10
Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 9   NYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAMLFQLNQDPSFPR 68
           NY M +LFF+L  LL DG PEL + I R+ VF KQK+ YFYPAWAYA+          P 
Sbjct: 524 NYLMGSLFFSLFKLLADGLPELTLTISRIAVFCKQKELYFYPAWAYAI----------PS 583

Query: 69  RIFSLDFSYSLRYWLHPSTYQLSFNLPKQWCFLYSRQFV 108
            I  +  S+   +     TY +    P+   F+  RQF+
Sbjct: 584 AILKIPISFLESFLWTMLTYYVIGYSPEMGRFI--RQFL 610

[Close]

BLAST of CSPI03G24350 vs. TAIR 10
Match: AT4G15236.1 (ABC-2 and Plant PDR ABC-type transporter family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-10
Identity = 28/48 (58.33%), Postives = 37/48 (77.08%), Query Frame = 0


Query: 9   NYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAM 57
           NY + +LFF+L+ LL DG PEL + + R+ VF KQK+ YFYPAWAYA+
Sbjct: 538 NYLLGSLFFSLIKLLADGLPELTLTVSRIAVFCKQKELYFYPAWAYAI 585

[Close]

BLAST of CSPI03G24350 vs. TAIR 10
Match: AT4G15233.2 (ABC-2 and Plant PDR ABC-type transporter family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.0e-10
Identity = 40/99 (40.40%), Postives = 53/99 (53.54%), Query Frame = 0


Query: 9   NYFMVALFFALVLLLVDGFPELVMAIQRVEVFYKQKQFYFYPAWAYAMLFQLNQDPSFPR 68
           NY M +LFF+L  LL DG PEL + I R+ VF KQK+ YFYPAWAYA+          P 
Sbjct: 542 NYLMGSLFFSLFKLLADGLPELTLTISRIAVFCKQKELYFYPAWAYAI----------PS 601

Query: 69  RIFSLDFSYSLRYWLHPSTYQLSFNLPKQWCFLYSRQFV 108
            I  +  S+   +     TY +    P+   F+  RQF+
Sbjct: 602 AILKIPISFLESFLWTMLTYYVIGYSPEMGRFI--RQFL 628

The following BLAST results are available for this feature:

BLAST of CSPI03G24350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFH0	2.5e-13	40.58	ABC transporter G family member 37 OS=Arabidopsis thaliana OX=3702 GN=ABCG37 PE=...	[more]
Q9ZUT8	2.8e-12	64.29	ABC transporter G family member 33 OS=Arabidopsis thaliana OX=3702 GN=ABCG33 PE=...	[more]
Q8GU83	3.6e-12	58.93	ABC transporter G family member 41 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]
Q5W274	2.4e-11	58.93	Pleiotropic drug resistance protein 3 OS=Nicotiana tabacum OX=4097 GN=PDR3 PE=2 ...	[more]
Q2QV81	2.0e-10	56.60	ABC transporter G family member 49 OS=Oryza sativa subsp. japonica OX=39947 GN=A...	[more]

BLAST of CSPI03G24350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTH3	4.9e-20	84.38	ABC2_membrane domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G1901...	[more]
A0A0A0LBH1	3.5e-18	87.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G814320 PE=3 SV=1	[more]
A0A5A7UFY6	1.7e-17	85.71	Pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A1S3B6X0	1.7e-17	85.71	pleiotropic drug resistance protein 3-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3B7C4	1.7e-17	85.71	pleiotropic drug resistance protein 3-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of CSPI03G24350 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8649455.1	6.8e-40	56.52	hypothetical protein Csa_018878 [Cucumis sativus]	[more]
XP_031740704.1	1.5e-23	49.39	uncharacterized protein LOC116403552 isoform X1 [Cucumis sativus] >KAE8652876.1 ...	[more]
XP_011652141.2	7.3e-18	87.50	pleiotropic drug resistance protein 3 [Cucumis sativus] >KGN59512.2 hypothetical...	[more]
XP_008443151.1	3.6e-17	85.71	PREDICTED: pleiotropic drug resistance protein 3-like isoform X2 [Cucumis melo]	[more]
XP_008443150.1	3.6e-17	85.71	PREDICTED: pleiotropic drug resistance protein 3-like isoform X1 [Cucumis melo]	[more]

BLAST of CSPI03G24350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53480.1	1.8e-14	40.58	pleiotropic drug resistance 9	[more]
AT2G37280.1	2.0e-13	64.29	pleiotropic drug resistance 5	[more]
AT4G15233.1	2.0e-10	40.40	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT4G15236.1	2.0e-10	58.33	ABC-2 and Plant PDR ABC-type transporter family protein	[more]
AT4G15233.2	2.0e-10	40.40	ABC-2 and Plant PDR ABC-type transporter family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR48040:SF18	PLEIOTROPIC DRUG RESISTANCE PROTEIN 3-LIKE	coord: 1..56
None	No IPR available	PANTHER	PTHR48040	PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1	coord: 1..56

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G24350.1	CSPI03G24350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0140359	ABC-type transporter activity
molecular_function	GO:0005524	ATP binding