CSPI03G24230 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCGTTTTTCTAACTGAAACACAATCACACGCGTGTGTGCCGATCGTTGCCACGTGGCTTCGTCCTCTTTATATATAGTACCAGATCCCATCCGACACTTAAATCAAACCCAGAATTAGGGTTTCTCATTCTTCATTATCGTCATGGATGCAGCAGAACACCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAAGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAAGGAGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGAAATTGTATAGATGAGTTTAGGTCAAAATTAGAATGGGGGAGGGCTGTTGTTCTTGAAAAGTTATTGTTTTCACGTTGTTTGTGAATAGAGATGAGTTCTTCATTTTATTTTTCACCAAAAGTATTTTTATTTATTGATCGTAGAGCATATATAGGTTTTAATTTAAACTCGAAACTCCAATGGTTCTTTCAACATTCC TCGTTTTTCTAACTGAAACACAATCACACGCGTGTGTGCCGATCGTTGCCACGTGGCTTCGTCCTCTTTATATATAGTACCAGATCCCATCCGACACTTAAATCAAACCCAGAATTAGGGTTTCTCATTCTTCATTATCGTCATGGATGCAGCAGAACACCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAAGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAAGGAGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGAAATTGTATAGATGAGTTTAGGTCAAAATTAGAATGGGGGAGGGCTGTTGTTCTTGAAAAGTTATTGTTTTCACGTTGTTTGTGAATAGAGATGAGTTCTTCATTTTATTTTTCACCAAAAGTATTTTTATTTATTGATCGTAGAGCATATATAGGTTTTAATTTAAACTCGAAACTCCAATGGTTCTTTCAACATTCC ATGGATGCAGCAGAACACCACAATCCCCAACCAAGTTTCTTCCATCAAATCCTCCCTCCCCGTCTCGAAGACGCCGGCCTCGAGGATTCTGCCCTTCCTCCCGATTCCATTCGCGAAGCCTTCTTCAAGGCCGCCTCCGCCGTCAAATCCAGGGCCACCGCCCGTCTTTCACACTCCGACGACGAGGATGATGATGTTCCATGCTCCCCTACTTCCGCACTACCAACCGACGAGGACGCTCCGGCGATTTGCGCGACGAAGAAAGGATTGGAATTGCCCGAATTCGGTAAAGACGAGGTGGTTATTGGGGGAATGGAGGAAAGGAGAGGGAAGGGTTGTGTGGTAGATGGATTGGAAGGGTTGGAGATTGGCGATGATGCCGAGAAGGAGAAGGAGAAAGAGGAGAAGAAGAAACCTGTCTTAGGCGAAGGTTTCGCTTGA MDAAEHHNPQPSFFHQILPPRLEDAGLEDSALPPDSIREAFFKAASAVKSRATARLSHSDDEDDDVPCSPTSALPTDEDAPAICATKKGLELPEFGKDEVVIGGMEERRGKGCVVDGLEGLEIGDDAEKEKEKEEKKKPVLGEGFA* Homology
BLAST of CSPI03G24230 vs. ExPASy TrEMBL
Match: A0A0A0LDD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G483800 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 4.6e-74 Identity = 144/146 (98.63%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of CSPI03G24230 vs. ExPASy TrEMBL
Match: A0A5A7U9B5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G001030 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.7e-58 Identity = 125/155 (80.65%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of CSPI03G24230 vs. ExPASy TrEMBL
Match: A0A1S3BI85 (uncharacterized protein LOC103489947 OS=Cucumis melo OX=3656 GN=LOC103489947 PE=4 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 2.7e-58 Identity = 125/155 (80.65%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of CSPI03G24230 vs. ExPASy TrEMBL
Match: A0A6J1GBZ4 (uncharacterized protein LOC111452587 OS=Cucurbita moschata OX=3662 GN=LOC111452587 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 2.9e-44 Identity = 105/160 (65.62%), Postives = 120/160 (75.00%), Query Frame = 0
BLAST of CSPI03G24230 vs. ExPASy TrEMBL
Match: A0A6J1K989 (uncharacterized protein LOC111492831 OS=Cucurbita maxima OX=3661 GN=LOC111492831 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 4.5e-37 Identity = 92/145 (63.45%), Postives = 104/145 (71.72%), Query Frame = 0
BLAST of CSPI03G24230 vs. NCBI nr
Match: XP_011651498.1 (uncharacterized protein LOC105434906 [Cucumis sativus]) HSP 1 Score: 287.0 bits (733), Expect = 9.5e-74 Identity = 144/146 (98.63%), Postives = 144/146 (98.63%), Query Frame = 0
BLAST of CSPI03G24230 vs. NCBI nr
Match: KAE8650731.1 (hypothetical protein Csa_023393 [Cucumis sativus]) HSP 1 Score: 280.4 bits (716), Expect = 8.8e-72 Identity = 141/143 (98.60%), Postives = 141/143 (98.60%), Query Frame = 0
BLAST of CSPI03G24230 vs. NCBI nr
Match: XP_008447517.1 (PREDICTED: uncharacterized protein LOC103489947 [Cucumis melo] >KAA0050786.1 uncharacterized protein E6C27_scaffold404G00370 [Cucumis melo var. makuwa] >TYK08560.1 uncharacterized protein E5676_scaffold323G001030 [Cucumis melo var. makuwa]) HSP 1 Score: 234.6 bits (597), Expect = 5.6e-58 Identity = 125/155 (80.65%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of CSPI03G24230 vs. NCBI nr
Match: XP_038900451.1 (uncharacterized protein LOC120087668 [Benincasa hispida]) HSP 1 Score: 209.1 bits (531), Expect = 2.5e-50 Identity = 114/154 (74.03%), Postives = 124/154 (80.52%), Query Frame = 0
BLAST of CSPI03G24230 vs. NCBI nr
Match: XP_022949149.1 (uncharacterized protein LOC111452587 [Cucurbita moschata] >KAG7036479.1 hypothetical protein SDJN02_00096, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.0 bits (476), Expect = 6.0e-44 Identity = 105/160 (65.62%), Postives = 120/160 (75.00%), Query Frame = 0
BLAST of CSPI03G24230 vs. TAIR 10
Match: AT1G15230.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 26 Blast hits to 26 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 6.2e-15 Identity = 60/143 (41.96%), Postives = 83/143 (58.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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