CSPI03G23760 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTGGATGCCTATAAAAATGTTCCACAAGAAATGTCAGAGACTCAAAGGTTATTTATATTCAATTCAAAGGGGTTATCTTATATAAATGCATTAAAAGCTCAGGCCATCAAAAGCACCAAATCTTATCAAATTCTGCTTTTTGGTTCCCGTCTTCATCTTCTTCATTATGGGTGAACTACAGAGATTTATGCTTCATCAACCATGTTCAGCTACACTGCACCAAGACTTCCATGAAGAATTAGATCATTGGACGATCACCAAGGGAGTTGATCAGTACAACGTTGCATCTTCAACATCTTCATTTGAAGATTCAACGATTTCGAGTGAATCACTATCTTCATCAGACTTGGCAGACGATGCGTGTTCATCCACTTCAAATTCTTCGTCTCAATCTAATGGCCCATTGGAGGATTTCACAGATCTTTCTGCTCAACTCCCAATCAAGTAAGCTTTTGATGAAGTTCTTTTATTAGAATCACAAGTATGACTCTTTAAACTACTGCTGAATCTGTTCTAAAATTTCTAACAACTACTACTCTATGTGCAGGAGAGGACTATCAATGTTCTATCAGGGAAAGTCTCGGTCTTTTGCATCTCTGTCAAGTGTAAAGAGTATAGAAGACATTCCAAAGAAGCCAAATCCATACGGCAGGAGATTGAATACATGTAAGAGCTATGCAGGTGGCTTGGACATCCACAAGTCTTCCTATACCCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAAGAGCTCTCTGTCTTTTGTCCAAGTAAGGAGAGGCAGTAATTTGGCTGGTTGTAGACCTCCTCCCATTCCTATATATGATGAGAGCTTTTGATCTTTGATCACTTCCAAGTTCCAAAATTAAATTGGCCATTTATTTCCACTTAACTTTTGCTTGTACAATAGAAATGAAAATGAAAATCATGTAGCTGGCTTTATAGCCAATTTTTACTCTCTCAGCATTGATGAGAGTTTCTCATAGAAACTACTACATTTCATTCAATTATATTAAAATCCCATAGCTTATTTCCTTCCTCAAATACACTAAACAATTTGGCACACGTGATACGAATGATTGATCTTCTTTGATAGAAGATGTTTGAAACAAACAACTATTCACTTCAGAAATCGATTCTAAAGGAGGAATGGATATTAACGATGACACTAAACTCTCTAAAAGAGGAAGTGATCTAAAAGACTATCAGTTATGAAGTCTGTCTAGAATGAACTTCAGGAATTCTAGAGTGGAACAAAGCAAACAATATGAACAACGGAGGGTGCTGTTCCAATAATAAATAATGTTCAAAAGGCAGAAGCGCATGTCATGGCAATGAAGTGTATTACGACATCATACGGTTTCTAATTCTGTTTGATCTTCTCACTGGGGTTGGGATCAACTTTACTTCACCATCTCCTCCCACCTAAAGATGAAAATCAGCAACCTTAGATGAACCATCGGTCGGTTTCAAAGTACTGATATTGTCAAGGAAAAAAAAACCTTACAGGTTAAAATTATCCTCAC TTGGATGCCTATAAAAATGTTCCACAAGAAATGTCAGAGACTCAAAGGTTATTTATATTCAATTCAAAGGGGTTATCTTATATAAATGCATTAAAAGCTCAGGCCATCAAAAGCACCAAATCTTATCAAATTCTGCTTTTTGGTTCCCGTCTTCATCTTCTTCATTATGGGTGAACTACAGAGATTTATGCTTCATCAACCATGTTCAGCTACACTGCACCAAGACTTCCATGAAGAATTAGATCATTGGACGATCACCAAGGGAGTTGATCAGTACAACGTTGCATCTTCAACATCTTCATTTGAAGATTCAACGATTTCGAGTGAATCACTATCTTCATCAGACTTGGCAGACGATGCGTGTTCATCCACTTCAAATTCTTCGTCTCAATCTAATGGCCCATTGGAGGATTTCACAGATCTTTCTGCTCAACTCCCAATCAAGAGAGGACTATCAATGTTCTATCAGGGAAAGTCTCGGTCTTTTGCATCTCTGTCAAGTGTAAAGAGTATAGAAGACATTCCAAAGAAGCCAAATCCATACGGCAGGAGATTGAATACATGTAAGAGCTATGCAGGTGGCTTGGACATCCACAAGTCTTCCTATACCCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAAGAGCTCTCTGTCTTTTGTCCAAGTAAGGAGAGGCAGTAATTTGGCTGGTTGTAGACCTCCTCCCATTCCTATATATGATGAGAGCTTTTGATCTTTGATCACTTCCAAGTTCCAAAATTAAATTGGCCATTTATTTCCACTTAACTTTTGCTTGTACAATAGAAATGAAAATGAAAATCATGTAGCTGGCTTTATAGCCAATTTTTACTCTCTCAGCATTGATGAGAGTTTCTCATAGAAACTACTACATTTCATTCAATTATATTAAAATCCCATAGCTTATTTCCTTCCTCAAATACACTAAACAATTTGGCACACGTGATACGAATGATTGATCTTCTTTGATAGAAGATGTTTGAAACAAACAACTATTCACTTCAGAAATCGATTCTAAAGGAGGAATGGATATTAACGATGACACTAAACTCTCTAAAAGAGGAAGTGATCTAAAAGACTATCAGTTATGAAGTCTGTCTAGAATGAACTTCAGGAATTCTAGAGTGGAACAAAGCAAACAATATGAACAACGGAGGGTGCTGTTCCAATAATAAATAATGTTCAAAAGGCAGAAGCGCATGTCATGGCAATGAAGTGTATTACGACATCATACGGTTTCTAATTCTGTTTGATCTTCTCACTGGGGTTGGGATCAACTTTACTTCACCATCTCCTCCCACCTAAAGATGAAAATCAGCAACCTTAGATGAACCATCGGTCGGTTTCAAAGTACTGATATTGTCAAGGAAAAAAAAACCTTACAGGTTAAAATTATCCTCAC ATGGGTGAACTACAGAGATTTATGCTTCATCAACCATGTTCAGCTACACTGCACCAAGACTTCCATGAAGAATTAGATCATTGGACGATCACCAAGGGAGTTGATCAGTACAACGTTGCATCTTCAACATCTTCATTTGAAGATTCAACGATTTCGAGTGAATCACTATCTTCATCAGACTTGGCAGACGATGCGTGTTCATCCACTTCAAATTCTTCGTCTCAATCTAATGGCCCATTGGAGGATTTCACAGATCTTTCTGCTCAACTCCCAATCAAGAGAGGACTATCAATGTTCTATCAGGGAAAGTCTCGGTCTTTTGCATCTCTGTCAAGTGTAAAGAGTATAGAAGACATTCCAAAGAAGCCAAATCCATACGGCAGGAGATTGAATACATGTAAGAGCTATGCAGGTGGCTTGGACATCCACAAGTCTTCCTATACCCTTCCAAAGGCTCCAACTTTTAAGAAGGCATCAAAGAGCTCTCTGTCTTTTGTCCAAGTAAGGAGAGGCAGTAATTTGGCTGGTTGTAGACCTCCTCCCATTCCTATATATGATGAGAGCTTTTGA MGELQRFMLHQPCSATLHQDFHEELDHWTITKGVDQYNVASSTSSFEDSTISSESLSSSDLADDACSSTSNSSSQSNGPLEDFTDLSAQLPIKRGLSMFYQGKSRSFASLSSVKSIEDIPKKPNPYGRRLNTCKSYAGGLDIHKSSYTLPKAPTFKKASKSSLSFVQVRRGSNLAGCRPPPIPIYDESF* Homology
BLAST of CSPI03G23760 vs. ExPASy TrEMBL
Match: A0A0A0L8C9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G435530 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.1e-99 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0
BLAST of CSPI03G23760 vs. ExPASy TrEMBL
Match: A0A5D3CBD2 (Oxidative stress 3, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00260 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93 Identity = 181/190 (95.26%), Postives = 182/190 (95.79%), Query Frame = 0
BLAST of CSPI03G23760 vs. ExPASy TrEMBL
Match: A0A1S3BH50 (uncharacterized protein LOC103489976 OS=Cucumis melo OX=3656 GN=LOC103489976 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93 Identity = 181/190 (95.26%), Postives = 182/190 (95.79%), Query Frame = 0
BLAST of CSPI03G23760 vs. ExPASy TrEMBL
Match: A0A6J1DLD1 (uncharacterized protein LOC111021114 OS=Momordica charantia OX=3673 GN=LOC111021114 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.5e-61 Identity = 134/189 (70.90%), Postives = 153/189 (80.95%), Query Frame = 0
BLAST of CSPI03G23760 vs. ExPASy TrEMBL
Match: A0A6J1GAT2 (uncharacterized protein LOC111452482 OS=Cucurbita moschata OX=3662 GN=LOC111452482 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 3.1e-46 Identity = 110/161 (68.32%), Postives = 123/161 (76.40%), Query Frame = 0
BLAST of CSPI03G23760 vs. NCBI nr
Match: XP_004149181.1 (uncharacterized protein LOC101218329 [Cucumis sativus] >KGN58023.1 hypothetical protein Csa_011606 [Cucumis sativus]) HSP 1 Score: 370.9 bits (951), Expect = 6.4e-99 Identity = 188/189 (99.47%), Postives = 188/189 (99.47%), Query Frame = 0
BLAST of CSPI03G23760 vs. NCBI nr
Match: XP_008447561.1 (PREDICTED: uncharacterized protein LOC103489976 [Cucumis melo] >KAA0050854.1 Oxidative stress 3, putative isoform 2 [Cucumis melo var. makuwa] >TYK08498.1 Oxidative stress 3, putative isoform 2 [Cucumis melo var. makuwa]) HSP 1 Score: 352.1 bits (902), Expect = 3.1e-93 Identity = 181/190 (95.26%), Postives = 182/190 (95.79%), Query Frame = 0
BLAST of CSPI03G23760 vs. NCBI nr
Match: XP_038877919.1 (uncharacterized protein LOC120070129 [Benincasa hispida]) HSP 1 Score: 313.2 bits (801), Expect = 1.6e-81 Identity = 164/191 (85.86%), Postives = 173/191 (90.58%), Query Frame = 0
BLAST of CSPI03G23760 vs. NCBI nr
Match: XP_022153661.1 (uncharacterized protein LOC111021114 [Momordica charantia]) HSP 1 Score: 245.7 bits (626), Expect = 3.1e-61 Identity = 134/189 (70.90%), Postives = 153/189 (80.95%), Query Frame = 0
BLAST of CSPI03G23760 vs. NCBI nr
Match: XP_022949011.1 (uncharacterized protein LOC111452482 [Cucurbita moschata]) HSP 1 Score: 194.9 bits (494), Expect = 6.3e-46 Identity = 110/161 (68.32%), Postives = 123/161 (76.40%), Query Frame = 0
BLAST of CSPI03G23760 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 82.0 bits (201), Expect = 5.6e-16 Identity = 63/144 (43.75%), Postives = 81/144 (56.25%), Query Frame = 0
BLAST of CSPI03G23760 vs. TAIR 10
Match: AT4G26288.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: oxidative stress 3 (TAIR:AT5G56550.1); Has 289 Blast hits to 232 proteins in 41 species: Archae - 0; Bacteria - 12; Metazoa - 36; Fungi - 21; Plants - 151; Viruses - 2; Other Eukaryotes - 67 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 8.0e-15 Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = 0
BLAST of CSPI03G23760 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 1.1e-06 Identity = 36/90 (40.00%), Postives = 50/90 (55.56%), Query Frame = 0
BLAST of CSPI03G23760 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 49.3 bits (116), Expect = 4.0e-06 Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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