CSPI03G23340 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G23340
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein NDR1-like
Location	Chr3: 20187440 .. 20188178 (-)
RNA-Seq Expression	CSPI03G23340
Synteny	CSPI03G23340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTTCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTATTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAGGACAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTCCTCGACGAAACTCGCCGCCTGGTGGGTAACGTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGAAGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGAACAGAGGTCAAAGTCAACGAACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCGCCGTGCCCGTCGGCTCGCTGGTGAGGGTTATTTGGAGCTTTTGGGTGTTTGTTTTGTGGAAATTTTTTTGAAATTAAACCTCAACTGTGTTTCTTGTTGTGGGTTTGTTTGATTTAGTCGAATTTTTGGGCGGCGTTTTTAGTCGGAAGTGTTCTCCACCGCCCACTCACGGCTGACGTTAGATGGTACATAAATTAA

mRNA sequence

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTTCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTATTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAGGACAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTCCTCGACGAAACTCGCCGCCTGGTGGGTAACGTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGAAGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGAACAGAGGTCAAAGTCAACGAACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCGCCGTGCCCGTCGGCTCGCTGTCGAATTTTTGGGCGGCGTTTTTAGTCGGAAGTGTTCTCCACCGCCCACTCACGGCTGACGTTAGATGGTACATAAATTAA

Coding sequence (CDS)

ATGGCGGAATCCGGCTGGTGCTGCAAGTGCTGCTTCAAGTTCATCATAACAGCCGGCTTTTCAGCTCTGTTTTTATGGTTAAGCCTTCGAACCCGCAAACCCAAATGCTCAATCGAATTTTTCTACATTCCAGCCTTAAATCAATCCCTAAATTATTCCTCGAATTCCTCCCTCATCTTCGATCTGCGTCTCAAAAACCAGAACAAGGACAAATCCGTCTACTATGACACTATCTATCTCAACCTCACGCTCCTCGACGAAACTCGCCGCCTGGTGGGTAACGTGACGGTACCTGGTTTCCATCAAGGCCGCGACAAGAAGGCGTTGAGGAAGGAGTCCTTCGAGGCCCGTGGAGTTGATTGGAAGGCGGTTTCCCGTAATGGGTCAACGGTTATCCGGCTGGATTTGGCGACGGCGGTCAGGTACAAGATCTTGCTGTGGAAGACCAAGAGGGAGAATTTGAGACTCGGAACAGAGGTCAAAGTCAACGAACAGGGAGTCAAGGACAACCCACATGGAATCACGCTCAACTCTGGCGCCGCCGTGCCCGTCGGCTCGCTGTCGAATTTTTGGGCGGCGTTTTTAGTCGGAAGTGTTCTCCACCGCCCACTCACGGCTGACGTTAGATGGTACATAAATTAA

Protein sequence

MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIFDLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGAAVPVGSLSNFWAAFLVGSVLHRPLTADVRWYIN*

Homology

[Close]

BLAST of CSPI03G23340 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 6.7e-39
Identity = 90/205 (43.90%), Postives = 120/205 (58.54%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIFDLRLKN 66
           CC CC  FI TAG ++LFLWLSLR  KPKCSI+ F+IPAL +  N   N++L F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVYYDTIYLNLTLLDETR------RLVGNVTVPGFHQGRDKKALRKESFEA--RG 126
            NKDK +YYD ++LN + ++ T+       LVGN TVP F+QG  KKA +    +     
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNS 186
              +AV  NGS V RLDL T VR+KI+ WKTKR  + +G +V+VN  GVK    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 G-------AAVPVGSLSNFWAAFLV 197
                   ++ P+  L N    F +
Sbjct: 194 SDSSFPLRSSFPISVLMNLLVFFAI 218

[Close]

BLAST of CSPI03G23340 vs. ExPASy TrEMBL
Match: A0A0A0L886 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418790 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.2e-116
Identity = 210/213 (98.59%), Postives = 212/213 (99.53%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIF 60
           MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLN SSNSSLIF
Sbjct: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNK+KSVYYDTIYLNLTLLDETRRLVGN+TVPGFHQGRDKKALRKESFEARGVD
Sbjct: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA
Sbjct: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180

Query: 181 AVPVGSLSNFWAAFLVGSVLHRPLTADVRWYIN 214
           AVPVGSLSNFWAAFLVGSVLHRPLTADVRWYIN
Sbjct: 181 AVPVGSLSNFWAAFLVGSVLHRPLTADVRWYIN 213

[Close]

BLAST of CSPI03G23340 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.1e-90
Identity = 170/196 (86.73%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNS-SLI 60
           M ESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIE FYIPALNQSLN SSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGV 120
           FDLRLKNQNKDKSVYYDTIYLN TLLDE RR VGN+TVPGFHQGRDKKALRKES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVN QG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPVGSLS----NFW 192
           AA+P G+L     +FW
Sbjct: 181 AAMPGGTLVRVIWSFW 196

[Close]

BLAST of CSPI03G23340 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 5.1e-90
Identity = 170/196 (86.73%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNS-SLI 60
           M ESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIE FYIPALNQSLN SSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGV 120
           FDLRLKNQNKDKSVYYDTIYLN TLLDE RR VGN+TVPGFHQGRDKKALRKES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVN QG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPVGSLS----NFW 192
           AA+P G+L     +FW
Sbjct: 181 AAMPGGTLVRVIWSFW 196

[Close]

BLAST of CSPI03G23340 vs. ExPASy TrEMBL
Match: A0A6J1CEH8 (protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 146/199 (73.37%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIF 60
           M E+G C +CCF FI+T+GF+ALFLWLSLRT KPKCSIE FYIPALNQSLN SS+S++ F
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNKDKSV+YD I LNLTL+D  RR VGN+TV GFHQGRDKKA RK   EARGVD
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLVDGGRRPVGNLTVAGFHQGRDKKAFRKGQVEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAV RNGS V RLDLATAVRYKIL WKTKR+NLR+G EVKVN QG K+ PHGITL+SGA
Sbjct: 121 WKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGITLSSGA 180

Query: 181 AV----PVGSLSNFWAAFL 196
           AV    P G+L +  A  L
Sbjct: 181 AVAGRSPAGALWSVGALIL 199

[Close]

BLAST of CSPI03G23340 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.5e-70
Identity = 140/196 (71.43%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIF 60
           M ESG CC+CCF FI+T+GF+ALFLWLSLRTRKPKCSIE FYIPALNQSLN   NS++ F
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNKDKSV+YD++ LNLTL+    R +GNVTVPGFHQGR KKA R E+ EARGVD
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG--GRPLGNVTVPGFHQGRGKKAFRNETIEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGS + RLDLATAVR+KIL W TKRENLR+G E KVN+QG  + P GITL+SGA
Sbjct: 121 WKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GITLSSGA 180

Query: 181 AVPVGS-LSNFWAAFL 196
           AVP GS ++  W++++
Sbjct: 181 AVPDGSPVTVIWSSWV 193

[Close]

BLAST of CSPI03G23340 vs. NCBI nr
Match: XP_004152027.1 (protein NDR1 [Cucumis sativus] >KAE8650698.1 hypothetical protein Csa_011410 [Cucumis sativus])

HSP 1 Score: 371.7 bits (953), Expect = 4.2e-99
Identity = 187/199 (93.97%), Postives = 190/199 (95.48%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIF 60
           MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLN SSNSSLIF
Sbjct: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNSSSNSSLIF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNK+KSVYYDTIYLNLTLLDETRRLVGN+TVPGFHQGRDKKALRKESFEARGVD
Sbjct: 61  DLRLKNQNKEKSVYYDTIYLNLTLLDETRRLVGNLTVPGFHQGRDKKALRKESFEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA
Sbjct: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180

Query: 181 AVPVGSLS----NFWAAFL 196
           AVPVGSL     +FW   L
Sbjct: 181 AVPVGSLVRVIWSFWVFVL 199

[Close]

BLAST of CSPI03G23340 vs. NCBI nr
Match: XP_008454544.1 (PREDICTED: protein NDR1-like [Cucumis melo] >KAA0046485.1 protein NDR1-like [Cucumis melo var. makuwa] >TYJ97726.1 protein NDR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 340.5 bits (872), Expect = 1.0e-89
Identity = 170/196 (86.73%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNS-SLI 60
           M ESGWCCKCCFKFIITAGF+ALFLWLSLRTRKPKCSIE FYIPALNQSLN SSNS +L 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGV 120
           FDLRLKNQNKDKSVYYDTIYLN TLLDE RR VGN+TVPGFHQGRDKKALRKES EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSG 180
           DWKAVSRNGST++RLDLATAVRYKILLWKTKRENLRLGTE+KVN QG+KDNPHGITLNSG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPVGSLS----NFW 192
           AA+P G+L     +FW
Sbjct: 181 AAMPGGTLVRVIWSFW 196

[Close]

BLAST of CSPI03G23340 vs. NCBI nr
Match: XP_038897087.1 (protein NDR1-like [Benincasa hispida])

HSP 1 Score: 314.7 bits (805), Expect = 6.2e-82
Identity = 160/202 (79.21%), Postives = 169/202 (83.66%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIF 60
           M ESGWCC CCFKFIIT GF+ALFLWLSLRT KPKCSIEFFYIPALNQSLN  SNS+L+F
Sbjct: 1   MTESGWCCHCCFKFIITTGFAALFLWLSLRTHKPKCSIEFFYIPALNQSLNSPSNSTLLF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLL---DETRRLVGNVTVPGFHQGRDKKALRKESFEAR 120
           DLRLKNQNKDKSVYYD+I LNLTL+   D TRR VGN+TVPGFHQGRDKKA RKE+ EAR
Sbjct: 61  DLRLKNQNKDKSVYYDSISLNLTLVGAPDGTRRPVGNLTVPGFHQGRDKKAFRKETVEAR 120

Query: 121 GVDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLN 180
           GVDWKAVSRNG  V+RLD ATAVRYKIL WKTKRENLRLG EVKVN QG KD P  ITLN
Sbjct: 121 GVDWKAVSRNGPVVVRLDFATAVRYKILFWKTKRENLRLGAEVKVNRQGEKDYPRSITLN 180

Query: 181 SGAAVPVGSLS----NFWAAFL 196
           SGAAVP GSL     +FW   L
Sbjct: 181 SGAAVPSGSLMRVIWSFWVFVL 202

[Close]

BLAST of CSPI03G23340 vs. NCBI nr
Match: XP_022139632.1 (protein NDR1-like [Momordica charantia])

HSP 1 Score: 286.2 bits (731), Expect = 2.3e-73
Identity = 146/199 (73.37%), Postives = 163/199 (81.91%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIF 60
           M E+G C +CCF FI+T+GF+ALFLWLSLRT KPKCSIE FYIPALNQSLN SS+S++ F
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNKDKSV+YD I LNLTL+D  RR VGN+TV GFHQGRDKKA RK   EARGVD
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLVDGGRRPVGNLTVAGFHQGRDKKAFRKGQVEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAV RNGS V RLDLATAVRYKIL WKTKR+NLR+G EVKVN QG K+ PHGITL+SGA
Sbjct: 121 WKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGITLSSGA 180

Query: 181 AV----PVGSLSNFWAAFL 196
           AV    P G+L +  A  L
Sbjct: 181 AVAGRSPAGALWSVGALIL 199

[Close]

BLAST of CSPI03G23340 vs. NCBI nr
Match: XP_022976581.1 (protein NDR1-like [Cucurbita maxima])

HSP 1 Score: 275.8 bits (704), Expect = 3.2e-70
Identity = 140/196 (71.43%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 1   MAESGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIF 60
           M ESG CC+CCF FI+T+GF+ALFLWLSLRTRKPKCSIE FYIPALNQSLN   NS++ F
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKKALRKESFEARGVD 120
           DLRLKNQNKDKSV+YD++ LNLTL+    R +GNVTVPGFHQGR KKA R E+ EARGVD
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVG--GRPLGNVTVPGFHQGRGKKAFRNETIEARGVD 120

Query: 121 WKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNSGA 180
           WKAVSRNGS + RLDLATAVR+KIL W TKRENLR+G E KVN+QG  + P GITL+SGA
Sbjct: 121 WKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GITLSSGA 180

Query: 181 AVPVGS-LSNFWAAFL 196
           AVP GS ++  W++++
Sbjct: 181 AVPDGSPVTVIWSSWV 193

[Close]

BLAST of CSPI03G23340 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 162.2 bits (409), Expect = 4.8e-40
Identity = 90/205 (43.90%), Postives = 120/205 (58.54%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIFDLRLKN 66
           CC CC  FI TAG ++LFLWLSLR  KPKCSI+ F+IPAL +  N   N++L F +R  N
Sbjct: 14  CCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVYYDTIYLNLTLLDETR------RLVGNVTVPGFHQGRDKKALRKESFEA--RG 126
            NKDK +YYD ++LN + ++ T+       LVGN TVP F+QG  KKA +    +     
Sbjct: 74  PNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQVKPLNNQ 133

Query: 127 VDWKAVSRNGSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGVKDNPHGITLNS 186
              +AV  NGS V RLDL T VR+KI+ WKTKR  + +G +V+VN  GVK    GI +  
Sbjct: 134 TVLRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDGVKAQKKGIKMKK 193

Query: 187 G-------AAVPVGSLSNFWAAFLV 197
                   ++ P+  L N    F +
Sbjct: 194 SDSSFPLRSSFPISVLMNLLVFFAI 218

[Close]

BLAST of CSPI03G23340 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 149.8 bits (377), Expect = 2.4e-36
Identity = 89/200 (44.50%), Postives = 115/200 (57.50%), Query Frame = 0


Query: 7   CCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIFDLRLKN 66
           CC C FKFI T    AL LWLSLR +KPKCSI+ FYIPAL+++L+   N++L F +R  N
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVYYDTIYLNLTLLDETRR------LVGNVTVPGFHQGRDKKALRKESFEARGVD 126
            NKDK +YYD ++L  + ++ T        LV N TVP F+QG  KKA      +  G  
Sbjct: 74  PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKA------KKWGQV 133

Query: 127 W--------KAVSRNGSTVIRLDLATAVRYKILLWKTK-RENLRLGTEVKVNEQGVKDNP 186
           W        +AV  NGS V RLDL T VR+KI+ WKTK    +++G +V+VN  GVK N 
Sbjct: 134 WPLNNQTVLRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDGVKANE 193

Query: 187 HGITLNSGAAVPVGSLSNFW 192
             I +           SNFW
Sbjct: 194 KEIKMEK---------SNFW 198

[Close]

BLAST of CSPI03G23340 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative )

HSP 1 Score: 119.4 bits (298), Expect = 3.5e-27
Identity = 79/187 (42.25%), Postives = 111/187 (59.36%), Query Frame = 0


Query: 22  ALFLWLS-LRTRKPKCSIEFFYIPALNQSLNYSSNSSLIFDLRLKNQNKDKSVYYDTIYL 81
           AL LWLS L    P+CSI +FYIPALN+SL  S N++L F +RLKN N  + +YY+ ++L
Sbjct: 28  ALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQGIYYEDLHL 87

Query: 82  NL-TLLDETRRLVGNVTVPGFHQGRDKKALR---KESFEARGVDWKAVSRNGSTVIRLDL 141
           +  T ++ +  LV N TVP F+QG +KKA +      F  + V  +AV  NGS + R+DL
Sbjct: 88  SFSTRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTV-IQAVLPNGSAIFRVDL 147

Query: 142 ATAVRYKILLWKTKRENLRLGTEVKVNEQG---VKDNPHGITLNSGAAVPVGSLSNFWAA 201
              V+YK++ WKTKR  L+    ++VNE G   VKD   GI +    + P   L+ F   
Sbjct: 148 KMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKMKISDSSP-QRLTFFQVC 207

[Close]

BLAST of CSPI03G23340 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 54.7 bits (130), Expect = 1.1e-07
Identity = 41/171 (23.98%), Postives = 74/171 (43.27%), Query Frame = 0


Query: 4   SGWCCKCCFKFIITAGFSALFLWLSLRTRKPKCSIEFFYIPALNQSLNYSSNSSLIFDLR 63
           S + C      +   G  A  LWLSLR  +P+  I+ F +  L+Q      N+ + F++ 
Sbjct: 43  SKFICAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGV-ENARIAFNVT 102

Query: 64  LKNQNKDKSVYYDTIYLNLTLLDETRRLVGNVTVPGFHQGRDKK----ALRKESFEARGV 123
           + N N+   VY+D++  ++   D+   L+  +  P F Q  +       L   S      
Sbjct: 103 ILNPNQHMGVYFDSMEGSIYYKDQRVGLIPLLN-PFFQQPTNTTIVTGTLTGASLTVNSN 162

Query: 124 DWKAVSRN---GSTVIRLDLATAVRYKILLWKTKRENLRLGTEVKVNEQGV 168
            W   S +   G+   RLD+ + +R+K+  W +K   +     + V   G+
Sbjct: 163 RWTEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDGL 211

The following BLAST results are available for this feature:

BLAST of CSPI03G23340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48915	6.7e-39	43.90	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of CSPI03G23340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L886	3.2e-116	98.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G418790 PE=4 SV=1	[more]
A0A5A7TYN2	5.1e-90	86.73	Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A1S3BZM3	5.1e-90	86.73	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]
A0A6J1CEH8	1.1e-73	73.37	protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1	[more]
A0A6J1IH99	1.5e-70	71.43	protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1	[more]

BLAST of CSPI03G23340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152027.1	4.2e-99	93.97	protein NDR1 [Cucumis sativus] >KAE8650698.1 hypothetical protein Csa_011410 [Cu...	[more]
XP_008454544.1	1.0e-89	86.73	PREDICTED: protein NDR1-like [Cucumis melo] >KAA0046485.1 protein NDR1-like [Cuc...	[more]
XP_038897087.1	6.2e-82	79.21	protein NDR1-like [Benincasa hispida]	[more]
XP_022139632.1	2.3e-73	73.37	protein NDR1-like [Momordica charantia]	[more]
XP_022976581.1	3.2e-70	71.43	protein NDR1-like [Cucurbita maxima]	[more]

BLAST of CSPI03G23340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20600.1	4.8e-40	43.90	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	2.4e-36	44.50	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	3.5e-27	42.25	non-race specific disease resistance protein, putative	[more]
AT4G05220.1	1.1e-07	23.98	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31415:SF52	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY-RELATED	coord: 4..181
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 4..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G23340.1	CSPI03G23340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane