CSPI03G23180 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G23180
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 19990453 .. 19990731 (-)
RNA-Seq ExpressionCSPI03G23180
SyntenyCSPI03G23180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGCTCGCGAAGCTGAACATCTCGGGTTCACCTAAGACAAACATATGGAAATGGTCGACGAATGCGTGCGACGGTGAAAATGCGCAAAGATCGAACGGTTGGCAAAACGAAGACACGATGGCGAACGAAGCTTGTAGACAAAGAGATATGACCGAAATGTGCTCCACGACGCACGACAACCAAATGACTTGGGCAGAATGGGTTGGACGAACGACAGTAAAGACGAAGCCTTTCGAGAGAAGATGGTTGGTGAGTACTATGATGGGCGGCGGGTAG

mRNA sequence

ATGCGGCTCGCGAAGCTGAACATCTCGGGTTCACCTAAGACAAACATATGGAAATGGTCGACGAATGCGTGCGACGGTGAAAATGCGCAAAGATCGAACGGTTGGCAAAACGAAGACACGATGGCGAACGAAGCTTGTAGACAAAGAGATATGACCGAAATGTGCTCCACGACGCACGACAACCAAATGACTTGGGCAGAATGGGTTGGACGAACGACAGTAAAGACGAAGCCTTTCGAGAGAAGATGGTTGGTGAGTACTATGATGGGCGGCGGGTAG

Coding sequence (CDS)

ATGCGGCTCGCGAAGCTGAACATCTCGGGTTCACCTAAGACAAACATATGGAAATGGTCGACGAATGCGTGCGACGGTGAAAATGCGCAAAGATCGAACGGTTGGCAAAACGAAGACACGATGGCGAACGAAGCTTGTAGACAAAGAGATATGACCGAAATGTGCTCCACGACGCACGACAACCAAATGACTTGGGCAGAATGGGTTGGACGAACGACAGTAAAGACGAAGCCTTTCGAGAGAAGATGGTTGGTGAGTACTATGATGGGCGGCGGGTAG

Protein sequence

MRLAKLNISGSPKTNIWKWSTNACDGENAQRSNGWQNEDTMANEACRQRDMTEMCSTTHDNQMTWAEWVGRTTVKTKPFERRWLVSTMMGGG*
Homology
[Close]
BLAST of CSPI03G23180 vs. ExPASy TrEMBL
Match: A0A0A0LBE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415120 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.1e-48
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MRLAKLNISGSPKTNIWKWSTNACDGENAQRSNGWQNEDTMANEACRQRDMTEMCSTTHD 60
          MRLAKLNISGSPKTNIWKWSTNACDGENAQRSNGWQNEDTMANEACRQRDMTEMCSTTHD
Sbjct: 1  MRLAKLNISGSPKTNIWKWSTNACDGENAQRSNGWQNEDTMANEACRQRDMTEMCSTTHD 60

Query: 61 NQMTWAEWVGRTTVKTKPFERRWLVSTMMGGG 93
          NQMTWAEWVGRTTVKTKPFERRWLVSTMMGGG
Sbjct: 61 NQMTWAEWVGRTTVKTKPFERRWLVSTMMGGG 92

[Close]
BLAST of CSPI03G23180 vs. NCBI nr
Match: KGN57967.1 (hypothetical protein Csa_010380 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 1.3e-47
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0 

Query: 1  MRLAKLNISGSPKTNIWKWSTNACDGENAQRSNGWQNEDTMANEACRQRDMTEMCSTTHD 60
          MRLAKLNISGSPKTNIWKWSTNACDGENAQRSNGWQNEDTMANEACRQRDMTEMCSTTHD
Sbjct: 1  MRLAKLNISGSPKTNIWKWSTNACDGENAQRSNGWQNEDTMANEACRQRDMTEMCSTTHD 60

Query: 61 NQMTWAEWVGRTTVKTKPFERRWLVSTMMGGG 93
          NQMTWAEWVGRTTVKTKPFERRWLVSTMMGGG
Sbjct: 61 NQMTWAEWVGRTTVKTKPFERRWLVSTMMGGG 92

The following BLAST results are available for this feature:
BLAST of CSPI03G23180 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G23180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBE16.1e-48100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G415120 PE=4 SV=1[more]
BLAST of CSPI03G23180 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57967.11.3e-47100.00hypothetical protein Csa_010380 [Cucumis sativus][more]
BLAST of CSPI03G23180 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G23180.1CSPI03G23180.1mRNA