CSPI03G22860 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G22860
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LOB domain-containing protein
Location	Chr3: 19591944 .. 19593449 (-)
RNA-Seq Expression	CSPI03G22860
Synteny	CSPI03G22860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTTCTTCTTCTACATCCACCAACACAAGCATGTCGGGGGGAGGTGGCGGCAGTGGCAGTGGCGGTGGCGGTGGTTCCCCGTGTGGAGCATGCAAGGTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCACGATTTGCTGCCATTCATAAGGTCTTTGGAGCAAGTAATGTCTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCACGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGTCAATCATTTTGTTTTTCTTTAGTTATCATCACTTATTAGCTCGATCAGATTCATTGTCGTTTAATTTTCTGGTGATGAATGATTAAGAATATGAATAAAAGATCTGTTTTTTTAGGCTAGCTCTGTTTGAGTTTTTAATATTAAAAACCTAACAATATAACTATTTAATTCATTTGTGAATTTCCTGGTTTCGTTATTTGATTTAATTTATTTAGGCCATTTTTCAAAAGTAAAATTAAAGTTTCATAATTTCAAAGTGAAAAAAATGAGAATTAATTGTGCTGTTCTTTAAATTTAGCTAAGAATTTGAAATGTTTTTCCCCTTCGAATAAGACTAATTAAAACCTTGTAGAACAAGGGTGAAAAAACAAATAGAAACAGAAAATTTAAAAACAAATGATAGTTAATTGGAGCCTAAAAGTTAGATTAATTTTTTTATAACCCATACAAATTTTTTTAGCTTAGTGGCGATCGTCTATTGAAAAACTACACAACAATAATTTTTTGTTTTGCTGTTTGTTTTCATTGTGAAAGCCAAAGAAAAAAAGAAAAAAAAAATCATATTGGAGATGCAAAATTTCACCTGATTAATCCATTAATCTAAGTGAGAACTTTAAAAGCATCAACTTTTTAATCTATAAAACAAGTCCTCTCTTTTCTTTTCTCACGCGATTCAAGGTTAGTTTGAATTGTCTTTTAATCAAACTTCGAGACAAACAGACGTTCTGAATTACAAGTTTGAACTGAAGGAATTTATTTATTTTTGGTTTTTGAAGGTGGCATACTTGCAAACACAGCTGATGCATGCCAAGGCTCAACTTGCAGAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAACAATCTCTCCAATGGATCAATTCCAAGTAATAATTATCAAACTCAAATTACGAACAACCCAAGCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCACAAGAACCTCAATTTCTTCAACCATTTCCCAGAAAAAAATTACCTTCTTCTTCTCATGCTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAATTAA

mRNA sequence

ATGGCTTCTTCTTCTTCTACATCCACCAACACAAGCATGTCGGGGGGAGGTGGCGGCAGTGGCAGTGGCGGTGGCGGTGGTTCCCCGTGTGGAGCATGCAAGGTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCACGATTTGCTGCCATTCATAAGGTCTTTGGAGCAAGTAATGTCTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCACGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGGCATACTTGCAAACACAGCTGATGCATGCCAAGGCTCAACTTGCAGAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAACAATCTCTCCAATGGATCAATTCCAAGTAATAATTATCAAACTCAAATTACGAACAACCCAAGCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCACAAGAACCTCAATTTCTTCAACCATTTCCCAGAAAAAAATTACCTTCTTCTTCTCATGCTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAATTAA

Coding sequence (CDS)

ATGGCTTCTTCTTCTTCTACATCCACCAACACAAGCATGTCGGGGGGAGGTGGCGGCAGTGGCAGTGGCGGTGGCGGTGGTTCCCCGTGTGGAGCATGCAAGGTTCTAAGGAGAAAATGTGTGGCTGATTGTATATTTGCTCCTTATTTTTGTTCAGAACAAGGGGCTGCACGATTTGCTGCCATTCATAAGGTCTTTGGAGCAAGTAATGTCTCAAAGTTGTTGCTTCATGTTCCTGTTCATGATCGTTGTGAAGCTGTTGTTACTATTGCCTATGAAGCTCAAGCAAGGATTCACGATCCTGTTTATGGTTGTGTTGCTCATATTTTTGCTCTTCAACAACAGGTGGCATACTTGCAAACACAGCTGATGCATGCCAAGGCTCAACTTGCAGAAACCCTAATGGATTCAGGAAGTAATATGGAGATTCAATGGACAGGCGATTTCAATAACAACAATCTCTCCAATGGATCAATTCCAAGTAATAATTATCAAACTCAAATTACGAACAACCCAAGCCCACAAAGCTCTCTAGAATCAGCTGCCAACAATGATGAAGCATTGTTATTCATTAATCAAAATCAATTATTTCATGAGAGCCAATTAAGCAGATCATCACAAGAACCTCAATTTCTTCAACCATTTCCCAGAAAAAAATTACCTTCTTCTTCTCATGCTGATCTTGGGGAACTCCATGCTTTGGCCCTTAGAATGATGAGAAATTAA

Protein sequence

MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLESAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMRN*

Homology

[Close]

BLAST of CSPI03G22860 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.2e-53
Identity = 132/241 (54.77%), Postives = 160/241 (66.39%), Query Frame = 0


Query: 19  GSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHV 78
           G+G+  G GSPCGACK LRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 79  PVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDS- 138
           P+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+M  KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 139 --------GSNMEIQWTGDFNNNNLSNGSIPSNNYQTQI----TNNP-SPQSSLESAANN 198
                    +N  + W     +   S  S P N++Q        NNP SPQSSLE + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 199 --DEALLFINQNQLFHESQLSRSSQEP-QFLQPFPRKKLP-SSSHADLGELHALALRMMR 242
              +     N  +  H++       +   F + +P KK   S   +DLGEL ALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

[Close]

BLAST of CSPI03G22860 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 5.6e-42
Identity = 94/138 (68.12%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 4   SSSTSTNTSMSGGGGGSG----------SGGGGGSPCGACKVLRRKCVADCIFAPYFCSE 63
           S   +T T++ GGGGG G          SGGGGG PCGACK LRRKCV  CIFAPYF SE
Sbjct: 2   SGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSE 61

Query: 64  QGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQ 123
           QG+A FAA+HKVFGASNVSKLLLH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQ
Sbjct: 62  QGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQ 121

Query: 124 QQVAYLQTQLMHAKAQLA 132
           QQV  LQ ++ + +A LA
Sbjct: 122 QQVVNLQAEVSYLQAHLA 139

[Close]

BLAST of CSPI03G22860 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 6.9e-40
Identity = 82/108 (75.93%), Postives = 89/108 (82.41%), Query Frame = 0


Query: 25  GGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 84
           G GSPCGACK LRRKCV  C+FAPYFC EQGAA FAAIHKVFGASNVSKLL H+P+ DR 
Sbjct: 3   GFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRP 62

Query: 85  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAE 133
           EA VTI+YEAQAR+ DP+YGCVAHIFALQQQV  LQ QL   KA  A+
Sbjct: 63  EAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

[Close]

BLAST of CSPI03G22860 vs. ExPASy Swiss-Prot
Match: O81323 (LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.6e-39
Identity = 85/119 (71.43%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 13  MSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           MS  G  S S GGGG PCGACK LRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVS
Sbjct: 1   MSSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLA 132
           KLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L + +A LA
Sbjct: 61  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

[Close]

BLAST of CSPI03G22860 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 4.4e-39
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 0


Query: 20  SGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + S    GSPCGACK LRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           + DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q A++++ + S
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

[Close]

BLAST of CSPI03G22860 vs. ExPASy TrEMBL
Match: A0A0A0LAE8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 8.5e-126
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES
Sbjct: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of CSPI03G22860 vs. ExPASy TrEMBL
Match: A0A5D3C536 (LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold718G00040 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.4e-114
Identity = 225/241 (93.36%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTS+SG GG     GGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSVSGCGG----SGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLM AKAQLA+TLMDSGSNMEIQWTGDFNN+NLSNGSIP+NNYQTQI NNP+PQSSLES
Sbjct: 121 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQ LQPFPRKKL SSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKL-SSSHADLGELHALALRMMR 236

Query: 241 N 242
           N
Sbjct: 241 N 236

[Close]

BLAST of CSPI03G22860 vs. ExPASy TrEMBL
Match: A0A1S3CG76 (LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 4.4e-114
Identity = 225/241 (93.36%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTS+SG GG     GGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSVSGCGG----SGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLM AKAQLA+TLMDSGSNMEIQWTGDFNN+NLSNGSIP+NNYQTQI NNP+PQSSLES
Sbjct: 121 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQ LQPFPRKKL SSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKL-SSSHADLGELHALALRMMR 236

Query: 241 N 242
           N
Sbjct: 241 N 236

[Close]

BLAST of CSPI03G22860 vs. ExPASy TrEMBL
Match: A0A6J1HWM7 (LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC111466950 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 5.4e-80
Identity = 181/242 (74.79%), Postives = 197/242 (81.40%), Query Frame = 0


Query: 2   ASSSSTSTNTSMS-GGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 61
           +SSSS++ N+S+S GGGGG G GGGGGSPCGACK LRRKCVA+CIFAPYF SEQGAARFA
Sbjct: 4   SSSSSSTANSSVSGGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFA 63

Query: 62  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 121
           A+HKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ
Sbjct: 64  AVHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQ 123

Query: 122 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP-SPQSSLE 181
            QLM AKAQLA+TLMDSG NME+QWTG F NNNLSNG IPS NY+TQI N   SPQSS+E
Sbjct: 124 AQLMQAKAQLAQTLMDSGGNMELQWTGSF-NNNLSNG-IPS-NYETQIMNPAVSPQSSVE 183

Query: 182 SAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMM 241
           SAANND AL+F+N              QE Q L     ++  +S H DLGEL ALALRMM
Sbjct: 184 SAANNDAALMFMNH------------YQESQTL----ARRRSASCHGDLGELQALALRMM 226

[Close]

BLAST of CSPI03G22860 vs. ExPASy TrEMBL
Match: A0A6J1HIG3 (LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463903 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.2e-76
Identity = 176/241 (73.03%), Postives = 193/241 (80.08%), Query Frame = 0


Query: 2   ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAA 61
           +SSSS++ N+S+SGGGGG   GGGGGSPCGACK LRRKCVA+CIFAPYF SEQGAARFAA
Sbjct: 4   SSSSSSTANSSVSGGGGG---GGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAA 63

Query: 62  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 121
           +HKVFGASNVSKLL HVP HDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVA LQ 
Sbjct: 64  VHKVFGASNVSKLLHHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVACLQA 123

Query: 122 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP-SPQSSLES 181
           QLM AKAQLA+TLM+SG NME+QWTG F NNNLSNG IPS NY+TQI N   SPQSS+ES
Sbjct: 124 QLMQAKAQLAQTLMESGGNMELQWTGSF-NNNLSNG-IPS-NYETQIMNPAVSPQSSVES 183

Query: 182 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 241
           AANND AL+F+N              QE Q L     ++  +S H DLGEL ALALRMMR
Sbjct: 184 AANNDAALMFMNH------------YQESQTL----GRRRSASCHGDLGELQALALRMMR 222

[Close]

BLAST of CSPI03G22860 vs. NCBI nr
Match: KAE8650674.1 (hypothetical protein Csa_009642 [Cucumis sativus])

HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-125
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 54  MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 113

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 114 AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 173

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES
Sbjct: 174 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 233

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR
Sbjct: 234 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 293

Query: 241 N 242
           N
Sbjct: 294 N 294

[Close]

BLAST of CSPI03G22860 vs. NCBI nr
Match: XP_004152037.2 (LOB domain-containing protein 16 [Cucumis sativus])

HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-125
Identity = 240/241 (99.59%), Postives = 240/241 (99.59%), Query Frame = 0


Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES
Sbjct: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240

Query: 241 N 242
           N
Sbjct: 241 N 241

[Close]

BLAST of CSPI03G22860 vs. NCBI nr
Match: XP_008461877.1 (PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domain-containing protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 420.6 bits (1080), Expect = 9.0e-114
Identity = 225/241 (93.36%), Postives = 230/241 (95.44%), Query Frame = 0


Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSSTSTNTS+SG GG     GGGGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSTSTNTSVSGCGG----SGGGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNPSPQSSLES 180
           TQLM AKAQLA+TLMDSGSNMEIQWTGDFNN+NLSNGSIP+NNYQTQI NNP+PQSSLES
Sbjct: 121 TQLMQAKAQLAQTLMDSGSNMEIQWTGDFNNSNLSNGSIPNNNYQTQIMNNPTPQSSLES 180

Query: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 240
           AANNDEALLFINQNQLFHESQLSRSSQEPQ LQPFPRKKL SSSHADLGELHALALRMMR
Sbjct: 181 AANNDEALLFINQNQLFHESQLSRSSQEPQILQPFPRKKL-SSSHADLGELHALALRMMR 236

Query: 241 N 242
           N
Sbjct: 241 N 236

[Close]

BLAST of CSPI03G22860 vs. NCBI nr
Match: XP_038888851.1 (LOB domain-containing protein 16-like [Benincasa hispida])

HSP 1 Score: 355.5 bits (911), Expect = 3.6e-94
Identity = 206/247 (83.40%), Postives = 212/247 (85.83%), Query Frame = 0


Query: 1   MASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFA 60
           MASSSS+S +    GGGG  G GG GGSPCGACK LRRKCVADCIFAPYFCSEQGAARFA
Sbjct: 1   MASSSSSSVS---CGGGGSGGGGGSGGSPCGACKFLRRKCVADCIFAPYFCSEQGAARFA 60

Query: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120
           AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ
Sbjct: 61  AIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQ 120

Query: 121 TQLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPS---NNYQTQITNN---PSP 180
           TQLM AKAQLA+TLMDS  NMEIQWT +F NNNLSNG IP+   NNYQTQI NN    SP
Sbjct: 121 TQLMQAKAQLAQTLMDSRGNMEIQWTENF-NNNLSNG-IPNNFQNNYQTQIMNNNPAVSP 180

Query: 181 QSSLESAANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHAL 240
           QSSLESAANNDEALLFINQ   FHESQ SRS +E QFLQPFP KKLPSS   DLGEL AL
Sbjct: 181 QSSLESAANNDEALLFINQIHNFHESQ-SRSPEESQFLQPFPTKKLPSSHVHDLGELQAL 240

Query: 241 ALRMMRN 242
           ALRMMRN
Sbjct: 241 ALRMMRN 241

[Close]

BLAST of CSPI03G22860 vs. NCBI nr
Match: XP_023511722.1 (LOB domain-containing protein 16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.9 bits (790), Expect = 3.8e-80
Identity = 179/241 (74.27%), Postives = 196/241 (81.33%), Query Frame = 0


Query: 2   ASSSSTSTNTSMSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAA 61
           +SSSS++ N+S+SGGGGG G GGGGGSPCGACK LRRKCVA+CIFAPYF SEQGAARFAA
Sbjct: 4   SSSSSSTANSSVSGGGGGGGGGGGGGSPCGACKFLRRKCVAECIFAPYFSSEQGAARFAA 63

Query: 62  IHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQT 121
           +HKVFGASNVSKLLLHVP HDRCEAVVTIAYEAQARI DPVYGCVAHIFALQQQVAYLQ 
Sbjct: 64  VHKVFGASNVSKLLLHVPAHDRCEAVVTIAYEAQARILDPVYGCVAHIFALQQQVAYLQA 123

Query: 122 QLMHAKAQLAETLMDSGSNMEIQWTGDFNNNNLSNGSIPSNNYQTQITNNP-SPQSSLES 181
           QLM AKAQLA+TLM+SG NME+QWTG F NNNLSNG IPS NY+TQI N   SPQSS+ES
Sbjct: 124 QLMQAKAQLAQTLMESGGNMELQWTGSF-NNNLSNG-IPS-NYETQIMNPAVSPQSSVES 183

Query: 182 AANNDEALLFINQNQLFHESQLSRSSQEPQFLQPFPRKKLPSSSHADLGELHALALRMMR 241
           AANND AL+F+N              QE Q L     ++  +S H DLGEL ALALRMMR
Sbjct: 184 AANNDAALMFMNH------------YQESQTL----ARRRSASCHGDLGELQALALRMMR 225

[Close]

BLAST of CSPI03G22860 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 208.4 bits (529), Expect = 6.6e-54
Identity = 132/241 (54.77%), Postives = 160/241 (66.39%), Query Frame = 0


Query: 19  GSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHV 78
           G+G+  G GSPCGACK LRRKC +DCIFAPYF SEQGAARFAAIHKVFGASNVSKLLL+V
Sbjct: 5   GNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNV 64

Query: 79  PVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDS- 138
           P+HDRCEAVVTIAYEAQAR+HDPVYGCV+HIFALQQQVA+LQ+Q+M  KAQ+A     + 
Sbjct: 65  PIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAA 124

Query: 139 --------GSNMEIQWTGDFNNNNLSNGSIPSNNYQTQI----TNNP-SPQSSLESAANN 198
                    +N  + W     +   S  S P N++Q        NNP SPQSSLE + +N
Sbjct: 125 GDLRHSSESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSN 184

Query: 199 --DEALLFINQNQLFHESQLSRSSQEP-QFLQPFPRKKLP-SSSHADLGELHALALRMMR 242
              +     N  +  H++       +   F + +P KK   S   +DLGEL ALALRMM+
Sbjct: 185 TSSDVTTTANVRETHHQTGGGVYGHDGIGFHEGYPNKKRSVSYCSSDLGELQALALRMMK 244

[Close]

BLAST of CSPI03G22860 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 172.6 bits (436), Expect = 4.0e-43
Identity = 94/138 (68.12%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 4   SSSTSTNTSMSGGGGGSG----------SGGGGGSPCGACKVLRRKCVADCIFAPYFCSE 63
           S   +T T++ GGGGG G          SGGGGG PCGACK LRRKCV  CIFAPYF SE
Sbjct: 2   SGGGNTITAVGGGGGGCGGGGSSGGGGSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSE 61

Query: 64  QGAARFAAIHKVFGASNVSKLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQ 123
           QG+A FAA+HKVFGASNVSKLLLH+PVH R +AVVTI YEAQARI DP+YGCVAHIFALQ
Sbjct: 62  QGSAYFAAVHKVFGASNVSKLLLHIPVHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQ 121

Query: 124 QQVAYLQTQLMHAKAQLA 132
           QQV  LQ ++ + +A LA
Sbjct: 122 QQVVNLQAEVSYLQAHLA 139

[Close]

BLAST of CSPI03G22860 vs. TAIR 10
Match: AT4G00220.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.9e-40
Identity = 85/119 (71.43%), Postives = 96/119 (80.67%), Query Frame = 0


Query: 13  MSGGGGGSGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVS 72
           MS  G  S S GGGG PCGACK LRRKCVA CIFAPYF SEQGAA FAA+HKVFGASNVS
Sbjct: 1   MSSSGNPSSSSGGGGGPCGACKFLRRKCVAGCIFAPYFDSEQGAAHFAAVHKVFGASNVS 60

Query: 73  KLLLHVPVHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLA 132
           KLL HVP H R +AVV+I +EAQAR+ DP+YGCV+HI +LQQQV  LQT+L + +A LA
Sbjct: 61  KLLHHVPEHKRPDAVVSICFEAQARLRDPIYGCVSHIVSLQQQVVSLQTELSYLQAHLA 119

[Close]

BLAST of CSPI03G22860 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 162.9 bits (411), Expect = 3.2e-40
Identity = 78/120 (65.00%), Postives = 94/120 (78.33%), Query Frame = 0


Query: 20  SGSGGGGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVP 79
           + S    GSPCGACK LRRKC   C+FAPYFC EQGA+ FAAIHKVFGASN SKLL H+P
Sbjct: 2   TSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLP 61

Query: 80  VHDRCEAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLMDSGS 139
           + DRCEA +TI+YEAQAR+ DP+YGCV+HIFALQQQV  LQ +L   K Q A++++ + S
Sbjct: 62  ISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADS 121

[Close]

BLAST of CSPI03G22860 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 76/111 (68.47%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 25  GGGSPCGACKVLRRKCVADCIFAPYFCSEQGAARFAAIHKVFGASNVSKLLLHVPVHDRC 84
           G GSPCGACK LRR+CV  C+FAPYFC EQGA+ FAAIH+VFGASN SKLL H+P+ DR 
Sbjct: 3   GSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDRR 62

Query: 85  EAVVTIAYEAQARIHDPVYGCVAHIFALQQQVAYLQTQLMHAKAQLAETLM 136
           EA  TI YEAQAR  DP+YGCV+HIF+LQQQV  LQTQL   K Q  +++M
Sbjct: 63  EAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

The following BLAST results are available for this feature:

BLAST of CSPI03G22860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SLB7	9.2e-53	54.77	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]
O22131	5.6e-42	68.12	LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S...	[more]
Q5UG13	6.9e-40	75.93	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
O81323	2.6e-39	71.43	LOB domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=LBD30 PE=1 S...	[more]
Q9M2J7	4.4e-39	65.00	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]

BLAST of CSPI03G22860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LAE8	8.5e-126	99.59	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G398920 PE=3 SV...	[more]
A0A5D3C536	4.4e-114	93.36	LOB domain-containing protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3CG76	4.4e-114	93.36	LOB domain-containing protein 16 OS=Cucumis melo OX=3656 GN=LOC103500368 PE=3 SV...	[more]
A0A6J1HWM7	5.4e-80	74.79	LOB domain-containing protein 16-like OS=Cucurbita maxima OX=3661 GN=LOC11146695...	[more]
A0A6J1HIG3	1.2e-76	73.03	LOB domain-containing protein 16-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]

BLAST of CSPI03G22860 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8650674.1	1.8e-125	99.59	hypothetical protein Csa_009642 [Cucumis sativus]	[more]
XP_004152037.2	1.8e-125	99.59	LOB domain-containing protein 16 [Cucumis sativus]	[more]
XP_008461877.1	9.0e-114	93.36	PREDICTED: LOB domain-containing protein 16 [Cucumis melo] >TYK06450.1 LOB domai...	[more]
XP_038888851.1	3.6e-94	83.40	LOB domain-containing protein 16-like [Benincasa hispida]	[more]
XP_023511722.1	3.8e-80	74.27	LOB domain-containing protein 16-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI03G22860 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42430.1	6.6e-54	54.77	lateral organ boundaries-domain 16	[more]
AT2G45420.1	4.0e-43	68.12	LOB domain-containing protein 18	[more]
AT4G00220.1	1.9e-40	71.43	Lateral organ boundaries (LOB) domain family protein	[more]
AT3G58190.1	3.2e-40	65.00	lateral organ boundaries-domain 29	[more]
AT2G42440.1	1.0e-38	68.47	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 29..127 e-value: 3.8E-36 score: 123.6
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 28..130 score: 22.573618
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..180
None	No IPR available	PANTHER	PTHR31529:SF23	LOB DOMAIN-CONTAINING PROTEIN 16	coord: 22..240
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 22..240

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G22860.1	CSPI03G22860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus