CSPI03G22490 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G22490
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	rho-N domain-containing protein 1, chloroplastic-like
Location	Chr3: 19063987 .. 19068003 (-)
RNA-Seq Expression	CSPI03G22490
Synteny	CSPI03G22490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATGATAAATTCACAATTACAGGCCAGCAGGACAAAGAAGAACGAACCGGAAAAGCGAAATTCTTCAAAGAAATGCAAATAAAAAACCCTTCCTTTCCTCACTAAAACCTTTCCTTCCTTCCAGGTGTCTTAACCAGCAATGTCTCAAGCCATTCATCTTCTTCCTCACAACCCTACAGGTATCTGTTCTTCATATCCACAAAATCTCTGTTGGGTGCTCTTTATTTTTGTTCTTTGCTTGCTTAAAGGCTGGGAAATTAAGTACACTATTATTTTTACATTTACTGGGTGTTTCTAATTTCCATATAATTTCATGTGTTTTGTCCTAACGATCAAATGTTTGCATTAAGGTCTCTAAAGTTCTCGAATTTTGAATTTCTATAGGTTTTAGCGCCTCTTGGTTTTATCTGTGTTTTGTTGTTTACTTTTCTATTTGGTTGAATCTGTTTGTGGAGAAATTAAAGCTTTGCACTGGTTGGATTTCGTTCGACTTTTTGTGTTGAGCTTGTTCTGTTTCTCTCTATTTTCCCTTTTCTAAGTTTAGGTTTGATTTTAGAGTACTTAATACCATTTTCTGATTGTTTGAAAATTCTCTACTTGGTTGGATTACATGACCCTTTGGTTTCCTTTGCTGTATCATATTCTGGCCTTCTCGAATTGATGTAGATGTATGAGTTTTCTTTTCCTCAGTTTTTGGAGGAAGGTCAAGATGTAATGGTTACATCTGATATTGGGATATTCTCACTGCTTGCTTGAAGTTGGGGGTATTTGCATCGTCACTTTGCAGTATTTGCATTTGTTGAATCTTATCTCTTTGCTGTATGTTCTGTTCTGATATTGACTTTTCCAGTTTTCACATCCAATGTTTTAAAAGGTTATTGAGGTTTACGTCTTGAGGGTCGCCTCAGGGCAAGACTCTAACTTTTAGCTGTGAGAATTGTGGCTTCTTTGAACCACAAGAGGTTTATGCCATTTTGTTATAATGCATCAAGGCTTAAAAGTATCTATGACCCATATAACGATTAGAATAATAATATTAATTTGCCTCATTCTTCAAAATTATAAAACTTCGTGTTCTGAAAATAGGAACTATTACTACTTTTTCTACCGTGACTTTCAAAGTAATTATAATATTAGTCAATCCTTTAAATGATAATAGTAGAGAAGTTAAAGATATCTCTTTTAGATTTTTTTTGTTCAAGCGGCAGTTAATAGGGGTGGTTTTTTATTTTTTATTTTATTTATTTTTCTCTTTTATGATCATTATGTTTAGCAACACCTGGTCAAACTAACTTAGGAGTTGTTAAATGTCTTTAGTTAAATTCGAAGCTTACGCCTTATGCTGGTTTAAGCCTGTGTTGTGCCTTTATGAGGAAAAGCCACAAGGGCGCTTTTTTCCTTTGTTAATTTCCATATTATTTTGCACATATGAAGATTGTTTAAACTGTTTTGATTTAAGGGCTTTGCTATAACTTCATCTTGAATTATTTTGGAGTGTTGTTTCCATAATTCAACGACGTGCCTCCATCTATTTCGGGAAGAGATTGACGATTGTACGTTGTCACATTTATAGGATTTATTTTGATTTTTATTTATTGTTGATCACTGTTGATGCATTATTGATGTTCAATAGTAACAGATAACAAGTCTGGAATTACATGTCTTGGTTGTAAAAACATTAGGCTGTTCATATATGCTCAAATCATGAAACTTAAAGCCTATGACTTGACCGCTAAGTTGTTTTCTCGATGCCCTTTACCTACAGCAACTGGTCCTAGTTGTTGCTTCTCCATTTTTCAATGAATAACCACACTATTATTGGTTGTTTTGATATACTTTTCAATGGAAGCTTCTTTGTCATTTCTACATTTCTTCTTTTTCTCTTTTCAAGCAATGCCTTTTCTTTATTTGAATGGGACTTCAATGGACTTCAATTGCATATTTCTAATTTTGTGATTGTTTTCTTTTCAATGAATAACCACACTTACCTAAAAGAAATGCCTCAAGCCAAGCAAAATAAAACTTAGGGAATGTTTGCATAAAGGTTCCGTAATCTGAAGCCAACAAATTGAAATGTAATCTAGCAAGAGACCCATTAGAAGAACTAATTGCGTAGTTCTAATTTTGTGGTTTATACCTTATAGCATGATGGATGACAACTGTTACTGTGTTTATGATTGCTTACTATTAATGTATGGCATAACACTTTGGACTAATAGGTGGAAAATTCGAGGTTGGTGAAGTTTTTTTTTTTTTATTTGTTCTTTCTGAAGGTATACTTCTTTTTCTCTTTCGAAGGCAACATCTTTTCTTGCTGCAGATGGCTTTCCTAGATTGGAGATTTTAAATAAATGGTTAAAAAGAAAGACTTGGGAATAAACCTGCTCTGCTTTTGCAACGTTCAGGGGATTTCAATATATTTATGGAATGGGAATCATACCCCATTTTTTACTTCGATACTTCTCCCTTATAAATTCTGTTCTTGTTTGCTTTATATAACTTGGGTTACTACTCGTGCTCGAAATCTTATTAGTTCTTATAAACATGGAATCTGGATTTGATATAGGCTTTGGACTGTCAGATAGCAGATGCATACCTTGCTCTGGAGTTTCAGGACGAGCAGCCTCGTTCTCTTTTCACTCTTTATGTGCTGAACATAGAATCAATGTACCAGTCAAATTTAGACCTCTAAACTGTACTTCGTTGGGGGAGTCTTTTACGTGCAAAGCCAGCTCAGGAGGTCACAGGAGAAACCCAGATTTTCCAAAGCAAAATAGGCATGGCTTCTCAAGAAGCAGAAATAGGCAAAATGAGGAGAGAGAGAGTCTTGACAATGTTGATGAATCTGATTTATTATTGTCTAAGAATGGACCATTACTTTCCATCTCTAGCACCCCAAAATCCCAGGCCACTGCTACCCCAGGACCAAGGGAAAAGGAAATTGTTGAACTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCAGCAATGAAAGAAGAGAAGAAAGTGGAATCTCAAGGACAAACGAAAGGGAGTGAGACAGTAGATTCTCTTCTTAAGCTATTGCGAAAGCATTCGGTGGAACAAGGGAAGAGAAGCAGTGGTGGGGGTGGCAGCAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGAATGGTCCTTATGATGAAGGAAGAGGCTCAAGCTTTTTTGGACTAAGTCCCAATTTGAGGGAGAAGGCCCAAAGACCCGTATCAAATTTCCAACGTAGATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGTCAACTCGACCAATGGTATGAATTCAAAAGGTGTGAAACCTAATGGAACTGATACAGGTTCTCAACTGAAAGGAAAGGTATGGACTCGGCAAGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAGGGAGGCAGAACAGGAGCCAGAGCCGGACCAAGAGTTCGAATTGGAACCAGAGGCTGAAACATATGATCTAGAGCATGAAGGTGATGAAATGGAGCCTGAACTTGTTAATTTATTAGGTGTGTCATCAGACGTCGATGACACGTTTGAGGATGATGTTAAAGACAATGAGGAATTTGCAAAGCATGGTGAACAAGAACATGAGGACTTGAACTCATTGAAACTTGCTGAACTGAGGGCGATTGCCAAATCTCGTAGTTTGAGAGGGTTTTCGAAGATGAAGAAGAGCGAGCTCGTGCAATTGTTAAGCAACGGTCAGTAAGGATGTCATACTGGACAGGAACATCTGGATTTAGGTTGTTTAGGTGTTTTTTTGTACTTATTTTTGTTGTGCTTATCAATCTGTTTGACTAGTTTTGAGTTAGAAATTGGTATTAGCTTTTTACAAACTCTTTCCCAGATTGTATATCAGGCTAATCTTCGCAGGTTCAGAGTACAAGTCAACAACAATCTCTTCTTTTAGTTTTTTCTCTTCTATTCAGACTCTTGTTCACTTATAGGAACCATTTTTTAAAGGGC

mRNA sequence

CAATGATAAATTCACAATTACAGGCCAGCAGGACAAAGAAGAACGAACCGGAAAAGCGAAATTCTTCAAAGAAATGCAAATAAAAAACCCTTCCTTTCCTCACTAAAACCTTTCCTTCCTTCCAGGTGTCTTAACCAGCAATGTCTCAAGCCATTCATCTTCTTCCTCACAACCCTACAGGCTTTGGACTGTCAGATAGCAGATGCATACCTTGCTCTGGAGTTTCAGGACGAGCAGCCTCGTTCTCTTTTCACTCTTTATGTGCTGAACATAGAATCAATGTACCAGTCAAATTTAGACCTCTAAACTGTACTTCGTTGGGGGAGTCTTTTACGTGCAAAGCCAGCTCAGGAGGTCACAGGAGAAACCCAGATTTTCCAAAGCAAAATAGGCATGGCTTCTCAAGAAGCAGAAATAGGCAAAATGAGGAGAGAGAGAGTCTTGACAATGTTGATGAATCTGATTTATTATTGTCTAAGAATGGACCATTACTTTCCATCTCTAGCACCCCAAAATCCCAGGCCACTGCTACCCCAGGACCAAGGGAAAAGGAAATTGTTGAACTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCAGCAATGAAAGAAGAGAAGAAAGTGGAATCTCAAGGACAAACGAAAGGGAGTGAGACAGTAGATTCTCTTCTTAAGCTATTGCGAAAGCATTCGGTGGAACAAGGGAAGAGAAGCAGTGGTGGGGGTGGCAGCAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGAATGGTCCTTATGATGAAGGAAGAGGCTCAAGCTTTTTTGGACTAAGTCCCAATTTGAGGGAGAAGGCCCAAAGACCCGTATCAAATTTCCAACGTAGATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGTCAACTCGACCAATGGTATGAATTCAAAAGGTGTGAAACCTAATGGAACTGATACAGGTTCTCAACTGAAAGGAAAGGTATGGACTCGGCAAGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAGGGAGGCAGAACAGGAGCCAGAGCCGGACCAAGAGTTCGAATTGGAACCAGAGGCTGAAACATATGATCTAGAGCATGAAGGTGATGAAATGGAGCCTGAACTTGTTAATTTATTAGGTGTGTCATCAGACGTCGATGACACGTTTGAGGATGATGTTAAAGACAATGAGGAATTTGCAAAGCATGGTGAACAAGAACATGAGGACTTGAACTCATTGAAACTTGCTGAACTGAGGGCGATTGCCAAATCTCGTAGTTTGAGAGGGTTTTCGAAGATGAAGAAGAGCGAGCTCGTGCAATTGTTAAGCAACGGTCAGTAAGGATGTCATACTGGACAGGAACATCTGGATTTAGGTTGTTTAGGTGTTTTTTTGTACTTATTTTTGTTGTGCTTATCAATCTGTTTGACTAGTTTTGAGTTAGAAATTGGTATTAGCTTTTTACAAACTCTTTCCCAGATTGTATATCAGGCTAATCTTCGCAGGTTCAGAGTACAAGTCAACAACAATCTCTTCTTTTAGTTTTTTCTCTTCTATTCAGACTCTTGTTCACTTATAGGAACCATTTTTTAAAGGGC

Coding sequence (CDS)

ATGTCTCAAGCCATTCATCTTCTTCCTCACAACCCTACAGGCTTTGGACTGTCAGATAGCAGATGCATACCTTGCTCTGGAGTTTCAGGACGAGCAGCCTCGTTCTCTTTTCACTCTTTATGTGCTGAACATAGAATCAATGTACCAGTCAAATTTAGACCTCTAAACTGTACTTCGTTGGGGGAGTCTTTTACGTGCAAAGCCAGCTCAGGAGGTCACAGGAGAAACCCAGATTTTCCAAAGCAAAATAGGCATGGCTTCTCAAGAAGCAGAAATAGGCAAAATGAGGAGAGAGAGAGTCTTGACAATGTTGATGAATCTGATTTATTATTGTCTAAGAATGGACCATTACTTTCCATCTCTAGCACCCCAAAATCCCAGGCCACTGCTACCCCAGGACCAAGGGAAAAGGAAATTGTTGAACTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCAGCAATGAAAGAAGAGAAGAAAGTGGAATCTCAAGGACAAACGAAAGGGAGTGAGACAGTAGATTCTCTTCTTAAGCTATTGCGAAAGCATTCGGTGGAACAAGGGAAGAGAAGCAGTGGTGGGGGTGGCAGCAGCAACAAGGACATCAGTTTTAACCATGTCAAAGAGAATGGTCCTTATGATGAAGGAAGAGGCTCAAGCTTTTTTGGACTAAGTCCCAATTTGAGGGAGAAGGCCCAAAGACCCGTATCAAATTTCCAACGTAGATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGTCAACTCGACCAATGGTATGAATTCAAAAGGTGTGAAACCTAATGGAACTGATACAGGTTCTCAACTGAAAGGAAAGGTATGGACTCGGCAAGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAAGGGAGGCAGAACAGGAGCCAGAGCCGGACCAAGAGTTCGAATTGGAACCAGAGGCTGAAACATATGATCTAGAGCATGAAGGTGATGAAATGGAGCCTGAACTTGTTAATTTATTAGGTGTGTCATCAGACGTCGATGACACGTTTGAGGATGATGTTAAAGACAATGAGGAATTTGCAAAGCATGGTGAACAAGAACATGAGGACTTGAACTCATTGAAACTTGCTGAACTGAGGGCGATTGCCAAATCTCGTAGTTTGAGAGGGTTTTCGAAGATGAAGAAGAGCGAGCTCGTGCAATTGTTAAGCAACGGTCAGTAA

Protein sequence

MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ*

Homology

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BLAST of CSPI03G22490 vs. ExPASy Swiss-Prot
Match: Q94K75 (Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RHON1 PE=1 SV=1)

HSP 1 Score: 238.8 bits (608), Expect = 1.1e-61
Identity = 185/420 (44.05%), Postives = 249/420 (59.29%), Query Frame = 0


Query: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MS   HL      G+ LSDSRC   S VS R  +    S C +H+ N  +K  P      
Sbjct: 3   MSGTFHLTSDYVPGYTLSDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVPNR---- 62

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
             SF C+ASSGG+RRNPDF + N+HG+ R  NRQ+  RE  D ++ SD+L S+NGPL ++
Sbjct: 63  -SSFVCRASSGGYRRNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNL 122

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKVE--SQGQTKGSETVDSL 180
           SS+PK QAT++PGPREKEIVELFRKVQAQLR R AA KEEKK+E  S+GQ K SETVDSL
Sbjct: 123 SSSPKFQATSSPGPREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSL 182

Query: 181 LKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPV 240
           LKLLRKHS EQ KR      SS  ++  + V +    D        G   N      RP 
Sbjct: 183 LKLLRKHSGEQSKRQV-SKFSSQGEVQGDTVDKQ---DRTGNLVTSGNKDNNASSFTRPT 242

Query: 241 SNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREH 300
           S+F+R+SPVPR +  P Y  E+  + ++  +          T +Q K  V    E E E 
Sbjct: 243 SSFRRKSPVPRSQSPPAYSSEATFDQSSSYSV---------TWTQKKDTVELHDEPEHEP 302

Query: 301 WEELQSQREAEQEPEP-----DQEFELEPEAETYDLEHEGDEMEPELVN----LLGVSSD 360
             E + + E E EP P     + + EL+PE+ ++  E E D++  ++++    +L V SD
Sbjct: 303 AYEHEHEPENESEPGPVTTMLEPDSELKPESSSFYQEEEDDDVTFDVLSQDDGILDVLSD 362

Query: 361 VDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 409
            D++ +D  +D++E     E+  +DL+ LKL ELR IAKSR L+G SKMKK+ELV+LL +
Sbjct: 363 DDESLDDADEDSDEAE---EEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGS 398

[Close]

BLAST of CSPI03G22490 vs. ExPASy Swiss-Prot
Match: Q8L4E7 (SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 8.6e-35
Identity = 129/359 (35.93%), Postives = 197/359 (54.87%), Query Frame = 0


Query: 63  SFTCKASSGGHR-RNPDFPKQNRHGFSRSRNRQNEERESLDNVDE--SDLLLSKNGPLLS 122
           S  C A+   HR R+ D  +  + G +R +++  +E++  +N+DE  +D++ SKNGP +S
Sbjct: 39  SLVCSANPNNHRSRSSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGPPIS 98

Query: 123 ISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQGQTKGSE-TVDSLL 182
           ++S  + QAT+ PG REKEIVELF++VQAQLR R   KEEKK E Q + +G   +VDSLL
Sbjct: 99  LTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPE-QAKAQGERGSVDSLL 158

Query: 183 KLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKA----- 242
            LLRKHSV+Q ++S        K+ S +  K +      + SS F  +    E+      
Sbjct: 159 NLLRKHSVDQRRKS-----GDEKEQSVDQTKRSNESGNKQNSSIFIKNDTQEEQKKPHPA 218

Query: 243 --QRPVSNFQRRSPVPRVKYQPI--YPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWT 302
             +RP SNF+RRSPVP VK+QP+     E ++N+ N    +  KP        L+ K  T
Sbjct: 219 AFKRPASNFRRRSPVPNVKFQPVTNVDAERVINNINDAVQE-AKPT-------LENKAAT 278

Query: 303 RQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDV 362
             E +     E  S  E E     D +   + E +  D +    E +   + +  V   +
Sbjct: 279 -DEPDSVSTFEPNSVIEPENLSLDDLDHISDDEPDASDTDEPSGEYDEPSLQIPSVPI-I 338

Query: 363 DDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 409
           D++ +  +K +            DL++LK+ ELR +AKSR ++G+SKMKK++LV+LLSN
Sbjct: 339 DESHDTTLKSS--------LGGPDLSTLKVTELRELAKSRGIKGYSKMKKNDLVELLSN 373

[Close]

BLAST of CSPI03G22490 vs. ExPASy TrEMBL
Match: A0A0A0L7X8 (Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G384780 PE=4 SV=1)

HSP 1 Score: 785.4 bits (2027), Expect = 1.1e-223
Identity = 409/410 (99.76%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL
Sbjct: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
           GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI
Sbjct: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQGQTKGSETVDSLLKL 180
           SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVE+QGQTKGSETVDSLLKL
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180

Query: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240
           LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF
Sbjct: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240

Query: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300
           QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE
Sbjct: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300

Query: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360
           LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN
Sbjct: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360

Query: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 411
           EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ
Sbjct: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 410

[Close]

BLAST of CSPI03G22490 vs. ExPASy TrEMBL
Match: A0A1S3BHF2 (rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 1.1e-197
Identity = 374/415 (90.12%), Postives = 390/415 (93.98%), Query Frame = 0


Query: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MSQAIHLLP NPTGFGLSDSRC+PCSGVSGRAASFSF SLCAEH INVPVKFRPLNCTSL
Sbjct: 1   MSQAIHLLPRNPTGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSL 60

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
           G SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDESDLL S+NGPLLSI
Sbjct: 61  GVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSI 120

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQGQTKGSETVDSLLKL 180
           SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+E+QGQTKGSETVDSLLKL
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKL 180

Query: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ------ 240
           LRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLSPNLREKAQ      
Sbjct: 181 LRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSF 240

Query: 241 -RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQES 300
            RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+TGSQLK KVWTRQES
Sbjct: 241 RRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQES 300

Query: 301 EREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTF 360
           EREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPELVNLLGVSSD+DDTF
Sbjct: 301 EREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTF 360

Query: 361 EDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 409
           EDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN
Sbjct: 361 EDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 411

[Close]

BLAST of CSPI03G22490 vs. ExPASy TrEMBL
Match: A0A1S4DXI1 (rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 8.6e-195
Identity = 374/429 (87.18%), Postives = 390/429 (90.91%), Query Frame = 0


Query: 1   MSQAIHLLPHNPT--------------GFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRI 60
           MSQAIHLLP NPT              GFGLSDSRC+PCSGVSGRAASFSF SLCAEH I
Sbjct: 1   MSQAIHLLPRNPTGGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGI 60

Query: 61  NVPVKFRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDE 120
           NVPVKFRPLNCTSLG SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDE
Sbjct: 61  NVPVKFRPLNCTSLGVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120

Query: 121 SDLLLSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQG 180
           SDLL S+NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+E+QG
Sbjct: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180

Query: 181 QTKGSETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLS 240
           QTKGSETVDSLLKLLRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLS
Sbjct: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLS 240

Query: 241 PNLREKAQ-------RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDT 300
           PNLREKAQ       RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+T
Sbjct: 241 PNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTET 300

Query: 301 GSQLKGKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPEL 360
           GSQLK KVWTRQESEREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPEL
Sbjct: 301 GSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPEL 360

Query: 361 VNLLGVSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKK 409
           VNLLGVSSD+DDTFEDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKK
Sbjct: 361 VNLLGVSSDIDDTFEDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKK 420

[Close]

BLAST of CSPI03G22490 vs. ExPASy TrEMBL
Match: A0A1S4DWS1 (rho-N domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 4.2e-194
Identity = 374/435 (85.98%), Postives = 390/435 (89.66%), Query Frame = 0


Query: 1   MSQAIHLLPHNPT--------------------GFGLSDSRCIPCSGVSGRAASFSFHSL 60
           MSQAIHLLP NPT                    GFGLSDSRC+PCSGVSGRAASFSF SL
Sbjct: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSL 60

Query: 61  CAEHRINVPVKFRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERES 120
           CAEH INVPVKFRPLNCTSLG SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERES
Sbjct: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERES 120

Query: 121 LDNVDESDLLLSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEK 180
           L+NVDESDLL S+NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEK
Sbjct: 121 LENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEK 180

Query: 181 KVESQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGS 240
           K+E+QGQTKGSETVDSLLKLLRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGS
Sbjct: 181 KMEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGS 240

Query: 241 SFFGLSPNLREKAQ-------RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVK 300
           S FGLSPNLREKAQ       RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K
Sbjct: 241 SIFGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMK 300

Query: 301 PNGTDTGSQLKGKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGD 360
            NGT+TGSQLK KVWTRQESEREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE D
Sbjct: 301 LNGTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEAD 360

Query: 361 EMEPELVNLLGVSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRG 409
           EMEPELVNLLGVSSD+DDTFEDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRG
Sbjct: 361 EMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRG 420

[Close]

BLAST of CSPI03G22490 vs. ExPASy TrEMBL
Match: A0A1S3BIA8 (rho-N domain-containing protein 1, chloroplastic isoform X6 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 685.3 bits (1767), Expect = 1.6e-193
Identity = 371/424 (87.50%), Postives = 388/424 (91.51%), Query Frame = 0


Query: 1   MSQAIHLLPHNPTG---------FGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVK 60
           MSQAIHLLP NPTG         F + DSRC+PCSGVSGRAASFSF SLCAEH INVPVK
Sbjct: 1   MSQAIHLLPRNPTGGKFEVGEVFFFVEDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVK 60

Query: 61  FRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLL 120
           FRPLNCTSLG SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDESDLL 
Sbjct: 61  FRPLNCTSLGVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLS 120

Query: 121 SKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQGQTKGS 180
           S+NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+E+QGQTKGS
Sbjct: 121 SRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGS 180

Query: 181 ETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLRE 240
           ETVDSLLKLLRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLSPNLRE
Sbjct: 181 ETVDSLLKLLRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLSPNLRE 240

Query: 241 KAQ-------RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLK 300
           KAQ       RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+TGSQLK
Sbjct: 241 KAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLK 300

Query: 301 GKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLG 360
            KVWTRQESEREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPELVNLLG
Sbjct: 301 AKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLG 360

Query: 361 VSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQ 409
           VSSD+DDTFEDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKKSELVQ
Sbjct: 361 VSSDIDDTFEDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQ 420

[Close]

BLAST of CSPI03G22490 vs. NCBI nr
Match: XP_004151986.1 (rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 785.4 bits (2027), Expect = 2.4e-223
Identity = 409/410 (99.76%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL
Sbjct: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
           GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI
Sbjct: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQGQTKGSETVDSLLKL 180
           SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVE+QGQTKGSETVDSLLKL
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180

Query: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240
           LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF
Sbjct: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240

Query: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300
           QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE
Sbjct: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300

Query: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360
           LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN
Sbjct: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360

Query: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 411
           EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ
Sbjct: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 410

[Close]

BLAST of CSPI03G22490 vs. NCBI nr
Match: XP_004151987.1 (rho-N domain-containing protein 1, chloroplastic isoform X2 [Cucumis sativus] >KAE8650656.1 hypothetical protein Csa_010944 [Cucumis sativus])

HSP 1 Score: 769.6 bits (1986), Expect = 1.3e-218
Identity = 404/410 (98.54%), Postives = 405/410 (98.78%), Query Frame = 0


Query: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MSQAIHLLPHNPT     DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL
Sbjct: 1   MSQAIHLLPHNPT-----DSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
           GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI
Sbjct: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQGQTKGSETVDSLLKL 180
           SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVE+QGQTKGSETVDSLLKL
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180

Query: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240
           LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF
Sbjct: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPVSNF 240

Query: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300
           QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE
Sbjct: 241 QRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEE 300

Query: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360
           LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN
Sbjct: 301 LQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTFEDDVKDN 360

Query: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 411
           EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ
Sbjct: 361 EEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNGQ 405

[Close]

BLAST of CSPI03G22490 vs. NCBI nr
Match: XP_008447421.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis melo])

HSP 1 Score: 699.1 bits (1803), Expect = 2.2e-197
Identity = 374/415 (90.12%), Postives = 390/415 (93.98%), Query Frame = 0


Query: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MSQAIHLLP NPTGFGLSDSRC+PCSGVSGRAASFSF SLCAEH INVPVKFRPLNCTSL
Sbjct: 1   MSQAIHLLPRNPTGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSL 60

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
           G SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDESDLL S+NGPLLSI
Sbjct: 61  GVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSI 120

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQGQTKGSETVDSLLKL 180
           SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+E+QGQTKGSETVDSLLKL
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKL 180

Query: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ------ 240
           LRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLSPNLREKAQ      
Sbjct: 181 LRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAGSF 240

Query: 241 -RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQES 300
            RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+TGSQLK KVWTRQES
Sbjct: 241 RRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQES 300

Query: 301 EREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPELVNLLGVSSDVDDTF 360
           EREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPELVNLLGVSSD+DDTF
Sbjct: 301 EREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPELVNLLGVSSDIDDTF 360

Query: 361 EDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 409
           EDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN
Sbjct: 361 EDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 411

[Close]

BLAST of CSPI03G22490 vs. NCBI nr
Match: XP_016900425.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X4 [Cucumis melo])

HSP 1 Score: 689.5 bits (1778), Expect = 1.8e-194
Identity = 374/429 (87.18%), Postives = 390/429 (90.91%), Query Frame = 0


Query: 1   MSQAIHLLPHNPT--------------GFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRI 60
           MSQAIHLLP NPT              GFGLSDSRC+PCSGVSGRAASFSF SLCAEH I
Sbjct: 1   MSQAIHLLPRNPTGGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGI 60

Query: 61  NVPVKFRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDE 120
           NVPVKFRPLNCTSLG SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERESL+NVDE
Sbjct: 61  NVPVKFRPLNCTSLGVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120

Query: 121 SDLLLSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVESQG 180
           SDLL S+NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+E+QG
Sbjct: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180

Query: 181 QTKGSETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLS 240
           QTKGSETVDSLLKLLRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGSS FGLS
Sbjct: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGSSIFGLS 240

Query: 241 PNLREKAQ-------RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDT 300
           PNLREKAQ       RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K NGT+T
Sbjct: 241 PNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTET 300

Query: 301 GSQLKGKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGDEMEPEL 360
           GSQLK KVWTRQESEREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE DEMEPEL
Sbjct: 301 GSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEADEMEPEL 360

Query: 361 VNLLGVSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKK 409
           VNLLGVSSD+DDTFEDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRGFSKMKK
Sbjct: 361 VNLLGVSSDIDDTFEDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRGFSKMKK 420

[Close]

BLAST of CSPI03G22490 vs. NCBI nr
Match: XP_016900423.1 (PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 687.2 bits (1772), Expect = 8.8e-194
Identity = 374/435 (85.98%), Postives = 390/435 (89.66%), Query Frame = 0


Query: 1   MSQAIHLLPHNPT--------------------GFGLSDSRCIPCSGVSGRAASFSFHSL 60
           MSQAIHLLP NPT                    GFGLSDSRC+PCSGVSGRAASFSF SL
Sbjct: 1   MSQAIHLLPRNPTVHFGMIGGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSL 60

Query: 61  CAEHRINVPVKFRPLNCTSLGESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERES 120
           CAEH INVPVKFRPLNCTSLG SFTCKASS GHRRNPDFPKQNR G+SRSRNRQNEERES
Sbjct: 61  CAEHGINVPVKFRPLNCTSLGVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERES 120

Query: 121 LDNVDESDLLLSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEK 180
           L+NVDESDLL S+NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEK
Sbjct: 121 LENVDESDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEK 180

Query: 181 KVESQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGS 240
           K+E+QGQTKGSETVDSLLKLLRKH+VEQGKRSSG GG SNKDISFNHVKENGPYDEGRGS
Sbjct: 181 KMEAQGQTKGSETVDSLLKLLRKHAVEQGKRSSGAGG-SNKDISFNHVKENGPYDEGRGS 240

Query: 241 SFFGLSPNLREKAQ-------RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVK 300
           S FGLSPNLREKAQ       RP SNFQRRSPVPRVKYQPIYPGESIV+STNGMNSKG+K
Sbjct: 241 SIFGLSPNLREKAQEPAGSFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMK 300

Query: 301 PNGTDTGSQLKGKVWTRQESEREHWEELQSQREAEQEPEPDQEFELEPEAETYDLEHEGD 360
            NGT+TGSQLK KVWTRQESEREHWEELQSQR+ EQEPE DQEFE+EPEAETYDLEHE D
Sbjct: 301 LNGTETGSQLKAKVWTRQESEREHWEELQSQRDTEQEPEVDQEFEMEPEAETYDLEHEAD 360

Query: 361 EMEPELVNLLGVSSDVDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRG 409
           EMEPELVNLLGVSSD+DDTFEDD+KDNEEF+KHG  EHE+LNSLKLAELRAIAKSRSLRG
Sbjct: 361 EMEPELVNLLGVSSDIDDTFEDDIKDNEEFSKHG--EHENLNSLKLAELRAIAKSRSLRG 420

[Close]

BLAST of CSPI03G22490 vs. TAIR 10
Match: AT1G06190.1 (Rho termination factor )

HSP 1 Score: 238.8 bits (608), Expect = 7.7e-63
Identity = 185/420 (44.05%), Postives = 249/420 (59.29%), Query Frame = 0


Query: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MS   HL      G+ LSDSRC   S VS R  +    S C +H+ N  +K  P      
Sbjct: 3   MSGTFHLTSDYVPGYTLSDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVPNR---- 62

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
             SF C+ASSGG+RRNPDF + N+HG+ R  NRQ+  RE  D ++ SD+L S+NGPL ++
Sbjct: 63  -SSFVCRASSGGYRRNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNL 122

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKVE--SQGQTKGSETVDSL 180
           SS+PK QAT++PGPREKEIVELFRKVQAQLR R AA KEEKK+E  S+GQ K SETVDSL
Sbjct: 123 SSSPKFQATSSPGPREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSL 182

Query: 181 LKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPV 240
           LKLLRKHS EQ KR      SS  ++  + V +    D        G   N      RP 
Sbjct: 183 LKLLRKHSGEQSKRQV-SKFSSQGEVQGDTVDKQ---DRTGNLVTSGNKDNNASSFTRPT 242

Query: 241 SNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREH 300
           S+F+R+SPVPR +  P Y  E+  + ++  +          T +Q K  V    E E E 
Sbjct: 243 SSFRRKSPVPRSQSPPAYSSEATFDQSSSYSV---------TWTQKKDTVELHDEPEHEP 302

Query: 301 WEELQSQREAEQEPEP-----DQEFELEPEAETYDLEHEGDEMEPELVN----LLGVSSD 360
             E + + E E EP P     + + EL+PE+ ++  E E D++  ++++    +L V SD
Sbjct: 303 AYEHEHEPENESEPGPVTTMLEPDSELKPESSSFYQEEEDDDVTFDVLSQDDGILDVLSD 362

Query: 361 VDDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSN 409
            D++ +D  +D++E     E+  +DL+ LKL ELR IAKSR L+G SKMKK+ELV+LL +
Sbjct: 363 DDESLDDADEDSDEAE---EEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVELLGS 398

[Close]

BLAST of CSPI03G22490 vs. TAIR 10
Match: AT1G06190.2 (Rho termination factor )

HSP 1 Score: 190.3 bits (482), Expect = 3.1e-48
Identity = 131/268 (48.88%), Postives = 165/268 (61.57%), Query Frame = 0


Query: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60
           MS   HL      G+ LSDSRC   S VS R  +    S C +H+ N  +K  P      
Sbjct: 3   MSGTFHLTSDYVPGYTLSDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVPNR---- 62

Query: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120
             SF C+ASSGG+RRNPDF + N+HG+ R  NRQ+  RE  D ++ SD+L S+NGPL ++
Sbjct: 63  -SSFVCRASSGGYRRNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNL 122

Query: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKVE--SQGQTKGSETVDSL 180
           SS+PK QAT++PGPREKEIVELFRKVQAQLR R AA KEEKK+E  S+GQ K SETVDSL
Sbjct: 123 SSSPKFQATSSPGPREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSL 182

Query: 181 LKLLRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQRPV 240
           LKLLRKHS EQ KR      SS  ++  + V +    D        G   N      RP 
Sbjct: 183 LKLLRKHSGEQSKRQV-SKFSSQGEVQGDTVDKQ---DRTGNLVTSGNKDNNASSFTRPT 242

Query: 241 SNFQRRSPVPRVKYQPIYPGESIVNSTN 266
           S+F+R+SPVPR +  P Y  E+  + ++
Sbjct: 243 SSFRRKSPVPRSQSPPAYSSEATFDQSS 258

[Close]

BLAST of CSPI03G22490 vs. TAIR 10
Match: AT2G31150.1 (ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism )

HSP 1 Score: 105.5 bits (262), Expect = 1.0e-22
Identity = 123/309 (39.81%), Postives = 156/309 (50.49%), Query Frame = 0


Query: 73  HRR-NPDFPKQNRHGFSRSRNRQNEERESL-DNVDESDLLLSKNGPLLSISSTPKSQATA 132
           HRR NPDF + N+HGF R RNR+NE+++ L D   E D+L SKN                
Sbjct: 26  HRRNNPDFSRNNKHGF-RGRNRRNEDKDGLVDGGLEDDMLSSKN---------------- 85

Query: 133 TPGPREKEIVELFRKVQAQLRER-AAMKEEKKVE--SQGQ-TKGSETVDSLLKLLRKHSV 192
                EKEIVELF+KVQ QLR R AA KEEKK E  S+GQ  K SETVDSLLKLLRKHS 
Sbjct: 86  -----EKEIVELFKKVQVQLRARAAAKKEEKKTEEASKGQGGKESETVDSLLKLLRKHSG 145

Query: 193 EQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKA---QRPVSNFQRR 252
           EQ K+      S  +    +   E     +   SS F  S N    A    RP S+F+R 
Sbjct: 146 EQSKKQVSNFNSEKQLQRDDDASER----QNHSSSRFD-SRNKDHNATPFTRPASSFKRN 205

Query: 253 SPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQESEREHWEELQS 312
           SPVPR K Q  Y  E+I +  +  +          T +Q K +V +R E E E   E +S
Sbjct: 206 SPVPRHKSQASYSSEAIFDEASSYSV---------TWTQKKDQVESRDEPEYE--PEPES 265

Query: 313 QREAEQEPEPDQEFELEPEAETYDLE-----------HEGDEMEPELVNLLGVSSDVDDT 362
             E + EPEP+ E+E E E E   LE            E DE E +   ++   SD D++
Sbjct: 266 AAEYD-EPEPEAEYEPESEPELAILESVSELKLESFYQEEDEDEEDHNFVIDELSDDDES 295

The following BLAST results are available for this feature:

BLAST of CSPI03G22490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K75	1.1e-61	44.05	Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q8L4E7	8.6e-35	35.93	SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV...	[more]

BLAST of CSPI03G22490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7X8	1.1e-223	99.76	Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G384780 PE=4 ...	[more]
A0A1S3BHF2	1.1e-197	90.12	rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3...	[more]
A0A1S4DXI1	8.6e-195	87.18	rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3...	[more]
A0A1S4DWS1	4.2e-194	85.98	rho-N domain-containing protein 1, chloroplastic isoform X1 OS=Cucumis melo OX=3...	[more]
A0A1S3BIA8	1.6e-193	87.50	rho-N domain-containing protein 1, chloroplastic isoform X6 OS=Cucumis melo OX=3...	[more]

BLAST of CSPI03G22490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151986.1	2.4e-223	99.76	rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis sativus]	[more]
XP_004151987.1	1.3e-218	98.54	rho-N domain-containing protein 1, chloroplastic isoform X2 [Cucumis sativus] >K...	[more]
XP_008447421.1	2.2e-197	90.12	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis ...	[more]
XP_016900425.1	1.8e-194	87.18	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X4 [Cucumis ...	[more]
XP_016900423.1	8.8e-194	85.98	PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis ...	[more]

BLAST of CSPI03G22490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06190.1	7.7e-63	44.05	Rho termination factor	[more]
AT1G06190.2	3.1e-48	48.88	Rho termination factor	[more]
AT2G31150.1	1.0e-22	39.81	ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 191..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 114..130
None	No IPR available	PANTHER	PTHR34449:SF5	RHO-N DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC	coord: 1..408
None	No IPR available	PANTHER	PTHR34449	RHO TERMINATION FACTOR	coord: 1..408
IPR011112	Rho termination factor, N-terminal	SMART	SM00959	Rho_N_2_a	coord: 373..410 e-value: 6.1E-4 score: 29.1
IPR011112	Rho termination factor, N-terminal	PFAM	PF07498	Rho_N	coord: 373..403 e-value: 8.5E-7 score: 28.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G22490.1	CSPI03G22490.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination