CSPI03G22180 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G22180
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr3: 18609848 .. 18610125 (+)
RNA-Seq ExpressionCSPI03G22180
SyntenyCSPI03G22180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGGAGCAAGGGATGGTGATGATGATGATACGAACGTAGAAAATTTCGCCAAAACCGTAAGGCGGAATTACCAATGGCAATGTGAGAATGAGAGAAAGCTTCGGTTGTATCGAAGAAATGGGGGAAGCTGGTACCGCTGTTGGGCCTTCTTCGTTCAAAGCGGCGGTTTGGCACTTAAAAGAACTAACATTTTACAAATATACTAATTATTTTATTTTAATTTTTGAGGGCACTTGTCAGCGAGCGCGTCTACTCAACTCGCCTCCTCCTCTAG

mRNA sequence

ATGAAGGGAGCAAGGGATGGTGATGATGATGATACGAACGTAGAAAATTTCGCCAAAACCGTAAGGCGGAATTACCAATGGCAATGTGAGAATGAGAGAAAGCTTCGGTTGTATCGAAGAAATGGGGGAAGCTGGGCACTTGTCAGCGAGCGCGTCTACTCAACTCGCCTCCTCCTCTAG

Coding sequence (CDS)

ATGAAGGGAGCAAGGGATGGTGATGATGATGATACGAACGTAGAAAATTTCGCCAAAACCGTAAGGCGGAATTACCAATGGCAATGTGAGAATGAGAGAAAGCTTCGGTTGTATCGAAGAAATGGGGGAAGCTGGGCACTTGTCAGCGAGCGCGTCTACTCAACTCGCCTCCTCCTCTAG

Protein sequence

MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL*
Homology
[Close]
BLAST of CSPI03G22180 vs. ExPASy TrEMBL
Match: A0A0A0LB35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G359140 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.6e-25
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL 60
          MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL
Sbjct: 1  MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL 59

[Close]
BLAST of CSPI03G22180 vs. NCBI nr
Match: KGN57877.1 (hypothetical protein Csa_009852 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 3.3e-25
Identity = 59/59 (100.00%), Postives = 59/59 (100.00%), Query Frame = 0 

Query: 1  MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL 60
          MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL
Sbjct: 1  MKGARDGDDDDTNVENFAKTVRRNYQWQCENERKLRLYRRNGGSWALVSERVYSTRLLL 59

The following BLAST results are available for this feature:
BLAST of CSPI03G22180 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI03G22180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LB351.6e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G359140 PE=4 SV=1[more]
BLAST of CSPI03G22180 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN57877.13.3e-25100.00hypothetical protein Csa_009852 [Cucumis sativus][more]
BLAST of CSPI03G22180 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G22180.1CSPI03G22180.1mRNA