CSPI03G22050 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G22050
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Arabinogalactan peptide 22
Location	Chr3: 18474391 .. 18475680 (+)
RNA-Seq Expression	CSPI03G22050
Synteny	CSPI03G22050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAAGCCAAAAATAGTGAAGAAACTTTGCCAGCAAAGGATTGAGTTCCAGCACAATCAACTTAACAGTCTGTCTATCCAGCACAGCAAAAGCATAAAAAATAAGGAATCTTTACAAAGAGAGAATGCAAAATCACATGGGTTTGCTTGGATTCCCAAAGCTTACAGTTCAAACATAAACAGTATTAAATCCCCAATTCCTCCATTTCCATTCTTCTCATTCATAATCTTCAAATTTCTTCTTCTTCTGTCTCTCTCTAGGGTTCTTCTGAGAGAGACAGAGATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTATTGCTGTCTTTTATGTTGTTGCGTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAGCTCCAACTAGTGATGGTTAGTTCTCTGTTCTTGGTTTTCTACTTTTTCTGTTTGTTTCTCGAGAAATTTTGTGGGAAAAAGATACAAAATCCAGAAAATGGGTTTCAAATTTAATTGGAAATAGGGATTGGGGAATTTGGATGGGATCCTTGTTTGAAAAAGAAACAAAATTTACCACTTTTCTCCCTCTAGAAGCTGCTATTTCTTTTTTTTTTTTTTTCTGTTGATTTCTTGAGAAATTTGCTGGGGGGAATGGGAGAGGAATATGAGAATGGCTTTGAAATTAAAACTCTCATCTTCATATCTACAAAGTTGAATCTCCTTAAATAATAAAATGGCCTCTGCTATTTTGAAGAAAAGAGTTCATTTCAAAGGCAAATTTGAGTTGCTGGAATTAGATGGGAACAGCAGAACTAACCTGAAAAAGAAGAACTTTTGTTGGTCTTTCACAGCCAACCACTAAGATTGGAATACAAAATCAACATTTTTCATCTTTCTGTCTTACCATTTTAGAACTTCTATTTTATTTCTTTAAAGAAAGGTTGCTCCGGTAGAACCCCAAAAATAACAATTGGGATTTGATATGTTGCAGGAACCGCAATAGACCAAGGAATAGCATACGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCATTGAAAAAACAGAAGAACAATTACTATGAATTTCATTATTTTCAAGTCTGTGAGAGATGAAAGGAAAGAGGGTGTGGGGTTGTGTTATTCTATATATTTGCCATTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTGAAGCTTGGCAAAGGTTTCATTTGTAGAAAGTGATCTGTTGTATTTTGTATTATAATTTATTTATATATTTTTCATTCTTTT

mRNA sequence

AGAAGCCAAAAATAGTGAAGAAACTTTGCCAGCAAAGGATTGAGTTCCAGCACAATCAACTTAACAGTCTGTCTATCCAGCACAGCAAAAGCATAAAAAATAAGGAATCTTTACAAAGAGAGAATGCAAAATCACATGGGTTTGCTTGGATTCCCAAAGCTTACAGTTCAAACATAAACAGTATTAAATCCCCAATTCCTCCATTTCCATTCTTCTCATTCATAATCTTCAAATTTCTTCTTCTTCTGTCTCTCTCTAGGGTTCTTCTGAGAGAGACAGAGATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTATTGCTGTCTTTTATGTTGTTGCGTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAGCTCCAACTAGTGATGGAACCGCAATAGACCAAGGAATAGCATACGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCATTGAAAAAACAGAAGAACAATTACTATGAATTTCATTATTTTCAAGTCTGTGAGAGATGAAAGGAAAGAGGGTGTGGGGTTGTGTTATTCTATATATTTGCCATTTTTTCTTTTCTTTCTTTCTTTCTTTTTTTTTTTTTTGAAGCTTGGCAAAGGTTTCATTTGTAGAAAGTGATCTGTTGTATTTTGTATTATAATTTATTTATATATTTTTCATTCTTTT

Coding sequence (CDS)

ATGGCTGTTTTGAGGGCTTCTTGTTTTGGAATATATGCTGCTCTGCTTATTGCTGTCTTTTATGTTGTTGCGTTGCCTCTATCTTCAGCTCAACTTTCTTCTTCTTCTCCAGCTCCAGCTCCAGCTCCAACTAGTGATGGAACCGCAATAGACCAAGGAATAGCATACGTTCTAATGCTGGTGGCTTTAGTGCTAACTTATATCATCCATTGA

Protein sequence

MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH*

Homology

[Close]

BLAST of CSPI03G22050 vs. ExPASy Swiss-Prot
Match: Q8L9T8 (Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 7.5e-11
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 9  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYI 68
          FG+  + ++++ + + LP++ AQ    S APAPAPTSDGT IDQGIAYVLMLVALVLTY+
Sbjct: 8  FGV--STIVSIIFAILLPMAHAQ----SAAPAPAPTSDGTTIDQGIAYVLMLVALVLTYL 63

Query: 69 IH 71
          IH
Sbjct: 68 IH 63

[Close]

BLAST of CSPI03G22050 vs. ExPASy Swiss-Prot
Match: Q9FK16 (Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 5.3e-09
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 16 LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH 71
          ++AVF ++++ L     S SS +PAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Sbjct: 10 ILAVFVIISVILLPIAQSHSS-SPAPAPTSDGTSIDQGIAYVLMMVALALTYFIH 63

[Close]

BLAST of CSPI03G22050 vs. ExPASy Swiss-Prot
Match: O82337 (Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 7.0e-09
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 16 LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH 71
          L +  + V L L+ AQ    S APAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Sbjct: 12 LFSFVFAVILSLAGAQ----SLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

[Close]

BLAST of CSPI03G22050 vs. ExPASy Swiss-Prot
Match: Q9M373 (Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 2.7e-08
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 6  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVL 65
          AS   +    L A  + V  P + AQ    S APAP+PTSDGT+IDQGIAY+LM+VALVL
Sbjct: 2  ASRNSVAVIALFAFVFAVISPFAGAQ----SLAPAPSPTSDGTSIDQGIAYLLMVVALVL 61

Query: 66 TYIIH 71
          TY+IH
Sbjct: 62 TYLIH 62

[Close]

BLAST of CSPI03G22050 vs. ExPASy TrEMBL
Match: A0A0A0L7T5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G355060 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-25
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML
Sbjct: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60

Query: 61 VALVLTYIIH 71
          VALVLTYIIH
Sbjct: 61 VALVLTYIIH 70

[Close]

BLAST of CSPI03G22050 vs. ExPASy TrEMBL
Match: A0A5D3BTZ5 (Arabinogalactan peptide 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00180 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.8e-20
Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MAVLRASCFGIYAA+LIAVFYV+ALP+SSA+LSSS   PAPAPTSDGT IDQGIAYVLML
Sbjct: 1  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSS---PAPAPTSDGTTIDQGIAYVLML 60

Query: 61 VALVLTYIIH 71
          VALVLTYIIH
Sbjct: 61 VALVLTYIIH 67

[Close]

BLAST of CSPI03G22050 vs. ExPASy TrEMBL
Match: A0A5A7U3P4 (Arabinogalactan peptide 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00750 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19
Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MAVLRASCFGIYAA+LIAVFYV+AL +SSA+LSSS   PAPAPTSDGT IDQGIAYVLML
Sbjct: 1  MAVLRASCFGIYAAVLIAVFYVLALSVSSAELSSS---PAPAPTSDGTTIDQGIAYVLML 60

Query: 61 VALVLTYIIH 71
          VALVLTYIIH
Sbjct: 61 VALVLTYIIH 67

[Close]

BLAST of CSPI03G22050 vs. ExPASy TrEMBL
Match: A0A1S3CNS5 (arabinogalactan peptide 22 OS=Cucumis melo OX=3656 GN=LOC103503022 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19
Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MAVLRASCFGIYAA+LIAVFYV+AL +SSA+LSSS   PAPAPTSDGT IDQGIAYVLML
Sbjct: 1  MAVLRASCFGIYAAVLIAVFYVLALSVSSAELSSS---PAPAPTSDGTTIDQGIAYVLML 60

Query: 61 VALVLTYIIH 71
          VALVLTYIIH
Sbjct: 61 VALVLTYIIH 67

[Close]

BLAST of CSPI03G22050 vs. ExPASy TrEMBL
Match: A0A6J1HT15 (arabinogalactan peptide 22-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467520 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 8.8e-15
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MA LRA CFG+Y A++IA+FYVV LP+S A+  +SSPAPAPAPTSDGTAIDQGIAY+LML
Sbjct: 21 MAALRA-CFGLY-AVIIAIFYVVMLPVSRAE-HASSPAPAPAPTSDGTAIDQGIAYILML 80

Query: 61 VALVLTYIIH 71
          +AL LTYIIH
Sbjct: 81 LALALTYIIH 87

[Close]

BLAST of CSPI03G22050 vs. NCBI nr
Match: KGN57863.1 (hypothetical protein Csa_009896 [Cucumis sativus])

HSP 1 Score: 124.4 bits (311), Expect = 3.9e-25
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML
Sbjct: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60

Query: 61 VALVLTYIIH 71
          VALVLTYIIH
Sbjct: 61 VALVLTYIIH 70

[Close]

BLAST of CSPI03G22050 vs. NCBI nr
Match: TYK03143.1 (arabinogalactan peptide 22 [Cucumis melo var. makuwa])

HSP 1 Score: 107.8 bits (268), Expect = 3.8e-20
Identity = 62/70 (88.57%), Postives = 66/70 (94.29%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MAVLRASCFGIYAA+LIAVFYV+ALP+SSA+LSSS   PAPAPTSDGT IDQGIAYVLML
Sbjct: 1  MAVLRASCFGIYAAVLIAVFYVLALPVSSAELSSS---PAPAPTSDGTTIDQGIAYVLML 60

Query: 61 VALVLTYIIH 71
          VALVLTYIIH
Sbjct: 61 VALVLTYIIH 67

[Close]

BLAST of CSPI03G22050 vs. NCBI nr
Match: XP_008465391.1 (PREDICTED: arabinogalactan peptide 22 [Cucumis melo] >KAA0050462.1 arabinogalactan peptide 22 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 3.2e-19
Identity = 61/70 (87.14%), Postives = 65/70 (92.86%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MAVLRASCFGIYAA+LIAVFYV+AL +SSA+LSSS   PAPAPTSDGT IDQGIAYVLML
Sbjct: 1  MAVLRASCFGIYAAVLIAVFYVLALSVSSAELSSS---PAPAPTSDGTTIDQGIAYVLML 60

Query: 61 VALVLTYIIH 71
          VALVLTYIIH
Sbjct: 61 VALVLTYIIH 67

[Close]

BLAST of CSPI03G22050 vs. NCBI nr
Match: XP_038898060.1 (arabinogalactan protein 41-like [Benincasa hispida] >XP_038898069.1 arabinogalactan protein 41-like [Benincasa hispida])

HSP 1 Score: 96.3 bits (238), Expect = 1.1e-16
Identity = 57/70 (81.43%), Postives = 63/70 (90.00%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MAVL+A CFGIYAA++IAVFYVV LP+S+A+ SSS   PAPAPTSDGT IDQGIAYVLML
Sbjct: 1  MAVLKA-CFGIYAAVIIAVFYVVTLPVSAAEFSSS---PAPAPTSDGTTIDQGIAYVLML 60

Query: 61 VALVLTYIIH 71
          VALVLTYIIH
Sbjct: 61 VALVLTYIIH 66

[Close]

BLAST of CSPI03G22050 vs. NCBI nr
Match: XP_022968217.1 (arabinogalactan peptide 22-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 89.0 bits (219), Expect = 1.8e-14
Identity = 53/70 (75.71%), Postives = 62/70 (88.57%), Query Frame = 0


Query: 1  MAVLRASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLML 60
          MA LRA CFG+Y A++IA+FYVV LP+S A+  +SSPAPAPAPTSDGTAIDQGIAY+LML
Sbjct: 21 MAALRA-CFGLY-AVIIAIFYVVMLPVSRAE-HASSPAPAPAPTSDGTAIDQGIAYILML 80

Query: 61 VALVLTYIIH 71
          +AL LTYIIH
Sbjct: 81 LALALTYIIH 87

[Close]

BLAST of CSPI03G22050 vs. TAIR 10
Match: AT5G24105.1 (arabinogalactan protein 41 )

HSP 1 Score: 67.4 bits (163), Expect = 5.3e-12
Identity = 38/62 (61.29%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 9  FGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYI 68
          FG+  + ++++ + + LP++ AQ    S APAPAPTSDGT IDQGIAYVLMLVALVLTY+
Sbjct: 8  FGV--STIVSIIFAILLPMAHAQ----SAAPAPAPTSDGTTIDQGIAYVLMLVALVLTYL 63

Query: 69 IH 71
          IH
Sbjct: 68 IH 63

[Close]

BLAST of CSPI03G22050 vs. TAIR 10
Match: AT5G53250.1 (arabinogalactan protein 22 )

HSP 1 Score: 61.2 bits (147), Expect = 3.8e-10
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 16 LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH 71
          ++AVF ++++ L     S SS +PAPAPTSDGT+IDQGIAYVLM+VAL LTY IH
Sbjct: 10 ILAVFVIISVILLPIAQSHSS-SPAPAPTSDGTSIDQGIAYVLMMVALALTYFIH 63

[Close]

BLAST of CSPI03G22050 vs. TAIR 10
Match: AT2G46330.1 (arabinogalactan protein 16 )

HSP 1 Score: 60.8 bits (146), Expect = 5.0e-10
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 16 LIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVLTYIIH 71
          L +  + V L L+ AQ    S APAPAPTSDGT+IDQGIAY+LM+VALVLTY+IH
Sbjct: 12 LFSFVFAVILSLAGAQ----SLAPAPAPTSDGTSIDQGIAYLLMVVALVLTYLIH 62

[Close]

BLAST of CSPI03G22050 vs. TAIR 10
Match: AT3G61640.1 (arabinogalactan protein 20 )

HSP 1 Score: 58.9 bits (141), Expect = 1.9e-09
Identity = 37/65 (56.92%), Postives = 45/65 (69.23%), Query Frame = 0


Query: 6  ASCFGIYAALLIAVFYVVALPLSSAQLSSSSPAPAPAPTSDGTAIDQGIAYVLMLVALVL 65
          AS   +    L A  + V  P + AQ    S APAP+PTSDGT+IDQGIAY+LM+VALVL
Sbjct: 2  ASRNSVAVIALFAFVFAVISPFAGAQ----SLAPAPSPTSDGTSIDQGIAYLLMVVALVL 61

Query: 66 TYIIH 71
          TY+IH
Sbjct: 62 TYLIH 62

The following BLAST results are available for this feature:

BLAST of CSPI03G22050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T8	7.5e-11	61.29	Arabinogalactan protein 41 OS=Arabidopsis thaliana OX=3702 GN=AGP41 PE=1 SV=1	[more]
Q9FK16	5.3e-09	63.64	Arabinogalactan protein 22 OS=Arabidopsis thaliana OX=3702 GN=AGP22 PE=1 SV=1	[more]
O82337	7.0e-09	65.45	Arabinogalactan protein 16 OS=Arabidopsis thaliana OX=3702 GN=AGP16 PE=1 SV=1	[more]
Q9M373	2.7e-08	56.92	Arabinogalactan protein 20 OS=Arabidopsis thaliana OX=3702 GN=AGP20 PE=1 SV=1	[more]

BLAST of CSPI03G22050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7T5	1.9e-25	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G355060 PE=4 SV=1	[more]
A0A5D3BTZ5	1.8e-20	88.57	Arabinogalactan peptide 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7U3P4	1.6e-19	87.14	Arabinogalactan peptide 22 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3CNS5	1.6e-19	87.14	arabinogalactan peptide 22 OS=Cucumis melo OX=3656 GN=LOC103503022 PE=4 SV=1	[more]
A0A6J1HT15	8.8e-15	75.71	arabinogalactan peptide 22-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CSPI03G22050 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57863.1	3.9e-25	100.00	hypothetical protein Csa_009896 [Cucumis sativus]	[more]
TYK03143.1	3.8e-20	88.57	arabinogalactan peptide 22 [Cucumis melo var. makuwa]	[more]
XP_008465391.1	3.2e-19	87.14	PREDICTED: arabinogalactan peptide 22 [Cucumis melo] >KAA0050462.1 arabinogalact...	[more]
XP_038898060.1	1.1e-16	81.43	arabinogalactan protein 41-like [Benincasa hispida] >XP_038898069.1 arabinogalac...	[more]
XP_022968217.1	1.8e-14	75.71	arabinogalactan peptide 22-like isoform X2 [Cucurbita maxima]	[more]

BLAST of CSPI03G22050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24105.1	5.3e-12	61.29	arabinogalactan protein 41	[more]
AT5G53250.1	3.8e-10	63.64	arabinogalactan protein 22	[more]
AT2G46330.1	5.0e-10	65.45	arabinogalactan protein 16	[more]
AT3G61640.1	1.9e-09	56.92	arabinogalactan protein 20	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009424	Arabinogalactan protein 16/20/22/41	PFAM	PF06376	AGP	coord: 36..70 e-value: 1.5E-19 score: 69.6
IPR009424	Arabinogalactan protein 16/20/22/41	PANTHER	PTHR33374	ARABINOGALACTAN PROTEIN 20	coord: 1..70
None	No IPR available	PANTHER	PTHR33374:SF38	ARABINOGALACTAN PROTEIN 41	coord: 1..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G22050.1	CSPI03G22050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane