CSPI03G22040 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G22040
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein IWS1-like protein A isoform X1
Location	Chr3: 18471486 .. 18472773 (+)
RNA-Seq Expression	CSPI03G22040
Synteny	CSPI03G22040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTGTGCTAAAGATGGAAGAAATCTTTGTTTTAAGGATGGAAAGATGGAAGTTGTGAATTTAGTTGAAAATAATGAAATGAAAGAGGAGATTGTTCAGCTTCTGATTGAGAATAATGTTCTGGCTGTTGAGAAGAAGGCTGAAAGTGAAGCTGAGCTGTGGAAAGGTAAGTTCAAACAATTGGAGATTCAGATTTCAAAAATGGATGAAAGGTAAGGTGATGGGAAGCCAGTGCTTTGTGGGAAGTTTGAAGGGGTAATTGGATTATCAATGAGTCCTGAAACTCGTGGTTTGGATGGTGTGGCCACTGATAAAAGAAATTAGAAACTTTGAAGCAGGTATTCTTTTTCTTTAATATTGTTTTTGTTTTCTCTTAATTGCATAAAGGTTATTTGGAATAACTTTTCTAAGTCTTTAGTTCGGACAACCACTTAAAATAGTTTGTTATAAATAGTCTCTTATTTTTTAAAAATCCAAATAGTTTGGATAAAAATAATTTTTTTGAAAAACAATTTGTTGGAATTCCTTGAATCTGTGATCTAGAGTTTTGAAATAACCAAGTATTAGGTTTCCCTCTACCCTTTGACATAGTTAACGCACATTAATGAACCCCGTGTGTCTTTGCGTTGATTTTCTATTGCTTTACGTTTTTCTAGTTTCTTTATTTATCAACTCCATAACACACTTATCCGACTCTAAGACAACCGCTCAAAAAAACAGTGATATGAAGGATTTGATTGTAAAATATTGAATATCTTTGATTTGTATTCATGAAGGTTTTAACCTGCGCATGTGTTAAGTGAATTTCTTGTTGCTTTTAACCTGATTTTTCCTGGATGACTGAAGTCTACATAACTTTTTTCCTTGTGTTTGGTGGATATACTCTAATGATAGGAACATCTCCGAATGGCTCATCACCCAATCCTACTGTTTCTTTTGGGCAAGGGAAAAACGTGGTACTATAGAATATTAGAATCTCGTTTCGAGCATGGTAATCGAATTCTAAGCAACTTTTTTCCTTGTGTTTTGTGCAAGTAGAGAAGTGAGATTACACCAAAGGTACTTGTTGATGAATTTTGTCGACTCCCTGTAATTTCTCTAATAGGAGCACCTGGCTGAGTTTCTCAGCAATGGTGATCTACAAGGTAATCTCAACAAATCTGTTAAAGAGTTGGAGGAGTATGACCCAAAGACCATTGAGCTGTGCAGAAATTTAGCCACACATTACTCCAAGCAGTTGTTCGAGATCTATGGAAATGAAGAAGATCCTTTCCTTTTACCTGCATGA

mRNA sequence

AGTTGTGCTAAAGATGGAAGAAATCTTTGTTTTAAGGATGGAAAGATGGAAGTTGTGAATTTAGTTGAAAATAATGAAATGAAAGAGGAGATTGTTCAGCTTCTGATTGAGAATAATGTTCTGGCTGTTGAGAAGAAGGCTGAAAGTGAAGCTGAGCTGTGGAAAGGAACATCTCCGAATGGCTCATCACCCAATCCTACTGTTTCTTTTGGGCAAGGGAAAAACGTGGAGCACCTGGCTGAGTTTCTCAGCAATGGTGATCTACAAGGTAATCTCAACAAATCTGTTAAAGAGTTGGAGGAGTATGACCCAAAGACCATTGAGCTGTGCAGAAATTTAGCCACACATTACTCCAAGCAGTTGTTCGAGATCTATGGAAATGAAGAAGATCCTTTCCTTTTACCTGCATGA

Coding sequence (CDS)

ATGGAAGTTGTGAATTTAGTTGAAAATAATGAAATGAAAGAGGAGATTGTTCAGCTTCTGATTGAGAATAATGTTCTGGCTGTTGAGAAGAAGGCTGAAAGTGAAGCTGAGCTGTGGAAAGGAACATCTCCGAATGGCTCATCACCCAATCCTACTGTTTCTTTTGGGCAAGGGAAAAACGTGGAGCACCTGGCTGAGTTTCTCAGCAATGGTGATCTACAAGGTAATCTCAACAAATCTGTTAAAGAGTTGGAGGAGTATGACCCAAAGACCATTGAGCTGTGCAGAAATTTAGCCACACATTACTCCAAGCAGTTGTTCGAGATCTATGGAAATGAAGAAGATCCTTTCCTTTTACCTGCATGA

Protein sequence

MEVVNLVENNEMKEEIVQLLIENNVLAVEKKAESEAELWKGTSPNGSSPNPTVSFGQGKNVEHLAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPFLLPA*

Homology

[Close]

BLAST of CSPI03G22040 vs. ExPASy TrEMBL
Match: A0A0A0LB21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G355050 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.9e-23
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MEVVNLVENNEMKEEIVQLLIENNVLAVEKKAESEAELWKGTSPNGSSPNPTVSFGQGKN 60
          MEVVNLVENNEMKEEIVQLLIENNVLAVEKKAESEAELWKGTSPNGSSPNPTVSFGQGKN
Sbjct: 1  MEVVNLVENNEMKEEIVQLLIENNVLAVEKKAESEAELWKGTSPNGSSPNPTVSFGQGKN 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of CSPI03G22040 vs. ExPASy TrEMBL
Match: A0A1S3CNR9 (uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503017 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.9e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPFLLPA 122
           LAEFL+NGD QGNLNKSVKELEEYDPK IELCRNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 557 LAEFLTNGDPQGNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 614

[Close]

BLAST of CSPI03G22040 vs. ExPASy TrEMBL
Match: A0A1S3CNR9 (uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503017 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 0


Query: 1   MEVVNLVENNEMKEEIVQLLIENNVLAVEKK-AESEAELWKG 42
           MEVVNLV+NNE+KEEI QLLIENNVLAVEKK AE+EAELWKG
Sbjct: 97  MEVVNLVDNNEIKEEIFQLLIENNVLAVEKKNAENEAELWKG 138

HSP 2 Score: 111.3 bits (277), Expect = 2.9e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPFLLPA 122
           LAEFL+NGD QGNLNKSVKELEEYDPK IELCRNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 548 LAEFLTNGDPQGNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 605

[Close]

BLAST of CSPI03G22040 vs. ExPASy TrEMBL
Match: A0A5D3BWC5 (Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11G00170 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.3e-07
Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 0


Query: 1   MEVVNLVENNEMKEEIVQLLIENNVLAVEKK-AESEAELWKG 42
           MEVVNLV+NNE+KEEI +LLIENNVLAVEKK AE+EAELWKG
Sbjct: 97  MEVVNLVDNNEIKEEIFELLIENNVLAVEKKNAENEAELWKG 138

HSP 2 Score: 111.3 bits (277), Expect = 2.9e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPFLLPA 122
           LAEFL+NGD QGNLNKSVKELEEYDPK IELCRNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 552 LAEFLTNGDPQGNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 609

[Close]

BLAST of CSPI03G22040 vs. ExPASy TrEMBL
Match: A0A5A7UA97 (Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00740 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 0


Query: 1   MEVVNLVENNEMKEEIVQLLIENNVLAVEKK-AESEAELWKG 42
           MEVVNLV+NNE+KEEI QLLIENNVLAVEKK AE+EAELWKG
Sbjct: 97  MEVVNLVDNNEIKEEIFQLLIENNVLAVEKKNAENEAELWKG 138

HSP 2 Score: 111.3 bits (277), Expect = 2.9e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPFLLPA 122
           LAEFL+NGD QGNLNKSVKELEEYDPK IELCRNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 511 LAEFLTNGDPQGNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 568

[Close]

BLAST of CSPI03G22040 vs. NCBI nr
Match: KGN57862.1 (hypothetical protein Csa_011671 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22
Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MEVVNLVENNEMKEEIVQLLIENNVLAVEKKAESEAELWKGTSPNGSSPNPTVSFGQGKN 60
          MEVVNLVENNEMKEEIVQLLIENNVLAVEKKAESEAELWKGTSPNGSSPNPTVSFGQGKN
Sbjct: 1  MEVVNLVENNEMKEEIVQLLIENNVLAVEKKAESEAELWKGTSPNGSSPNPTVSFGQGKN 60

Query: 61 V 62
          V
Sbjct: 61 V 61

[Close]

BLAST of CSPI03G22040 vs. NCBI nr
Match: XP_008465383.1 (PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465384.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465385.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465386.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 5.9e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPFLLPA 122
           LAEFL+NGD QGNLNKSVKELEEYDPK IELCRNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 557 LAEFLTNGDPQGNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 614

[Close]

BLAST of CSPI03G22040 vs. NCBI nr
Match: XP_008465383.1 (PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465384.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465385.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_008465386.1 PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo])

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-07
Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 0


Query: 1   MEVVNLVENNEMKEEIVQLLIENNVLAVEKK-AESEAELWKG 42
           MEVVNLV+NNE+KEEI QLLIENNVLAVEKK AE+EAELWKG
Sbjct: 97  MEVVNLVDNNEIKEEIFQLLIENNVLAVEKKNAENEAELWKG 138

HSP 2 Score: 111.3 bits (277), Expect = 5.9e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPFLLPA 122
           LAEFL+NGD QGNLNKSVKELEEYDPK IELCRNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 552 LAEFLTNGDPQGNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 609

[Close]

BLAST of CSPI03G22040 vs. NCBI nr
Match: KAA0050461.1 (protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 66.2 bits (160), Expect = 2.2e-07
Identity = 37/42 (88.10%), Postives = 40/42 (95.24%), Query Frame = 0


Query: 1   MEVVNLVENNEMKEEIVQLLIENNVLAVEKK-AESEAELWKG 42
           MEVVNLV+NNE+KEEI QLLIENNVLAVEKK AE+EAELWKG
Sbjct: 97  MEVVNLVDNNEIKEEIFQLLIENNVLAVEKKNAENEAELWKG 138

HSP 2 Score: 111.3 bits (277), Expect = 5.9e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPFLLPA 122
           LAEFL+NGD QGNLNKSVKELEEYDPK IELCRNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 511 LAEFLTNGDPQGNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 568

[Close]

BLAST of CSPI03G22040 vs. NCBI nr
Match: TYK03142.1 (protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 5.9e-21
Identity = 52/58 (89.66%), Postives = 54/58 (93.10%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPFLLPA 122
           LAEFL+NGD QGNLNKSVKELEEYDPK IELCRNLATHYSKQLFEIYGN+EDPF L A
Sbjct: 548 LAEFLTNGDPQGNLNKSVKELEEYDPKAIELCRNLATHYSKQLFEIYGNKEDPFFLLA 605

[Close]

BLAST of CSPI03G22040 vs. TAIR 10
Match: AT5G53220.1 (unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPF 118
           +A FL++GD  G++ KSV+EL+ +D K +E C  LA  YSKQLF+IY N EDPF
Sbjct: 308 IALFLTDGDSAGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPF 361

[Close]

BLAST of CSPI03G22040 vs. TAIR 10
Match: AT5G53220.2 (unknown protein; Has 3081 Blast hits to 2526 proteins in 331 species: Archae - 2; Bacteria - 227; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPF 118
           +A FL++GD  G++ KSV+EL+ +D K +E C  LA  YSKQLF+IY N EDPF
Sbjct: 308 IALFLTDGDSAGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPF 361

[Close]

BLAST of CSPI03G22040 vs. TAIR 10
Match: AT5G53220.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 1.2e-11
Identity = 30/54 (55.56%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 64  LAEFLSNGDLQGNLNKSVKELEEYDPKTIELCRNLATHYSKQLFEIYGNEEDPF 118
           +A FL++GD  G++ KSV+EL+ +D K +E C  LA  YSKQLF+IY N EDPF
Sbjct: 308 IALFLTDGDSAGDMKKSVEELKVFDFKGVEKCEELARKYSKQLFQIYNNREDPF 361

The following BLAST results are available for this feature:

BLAST of CSPI03G22040 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G22040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LB21	8.9e-23	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G355050 PE=4 SV=1	[more]
A0A1S3CNR9	2.9e-21	89.66	uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3CNR9	1.1e-07	88.10	uncharacterized protein LOC103503017 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3BWC5	2.3e-07	85.71	Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7UA97	1.1e-07	88.10	Protein IWS1-like protein A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]

BLAST of CSPI03G22040 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN57862.1	1.8e-22	100.00	hypothetical protein Csa_011671 [Cucumis sativus]	[more]
XP_008465383.1	5.9e-21	89.66	PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_00...	[more]
XP_008465383.1	2.2e-07	88.10	PREDICTED: uncharacterized protein LOC103503017 isoform X1 [Cucumis melo] >XP_00...	[more]
KAA0050461.1	2.2e-07	88.10	protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa]	[more]
TYK03142.1	5.9e-21	89.66	protein IWS1-like protein A isoform X1 [Cucumis melo var. makuwa]	[more]

Pages

BLAST of CSPI03G22040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53220.1	1.2e-11	55.56	unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2...	[more]
AT5G53220.2	1.2e-11	55.56	unknown protein; Has 3081 Blast hits to 2526 proteins in 331 species: Archae - 2...	[more]
AT5G53220.3	1.2e-11	55.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 9..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..56
None	No IPR available	PANTHER	PTHR34380	BNAA03G12380D PROTEIN	coord: 62..120
None	No IPR available	PANTHER	PTHR34380:SF1	BNAA03G12380D PROTEIN	coord: 62..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G22040.1	CSPI03G22040.1	mRNA