CSPI03G21590 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G21590
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Reverse transcriptase
Location	Chr3: 17906178 .. 17907265 (+)
RNA-Seq Expression	CSPI03G21590
Synteny	CSPI03G21590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAAGAAGACTCGAGTTAACAAAAAAGGGGAGTATGACAACGACAATGTTCAACAAGTCGTCCATAAAATTGTAAGACTTTTTGTAGATTACACATTTGAACTAACCATACATAAGCATTTCTATAACTTAGATTGGTTTTGGTTTTAGGATGAGATTTCAATGAATACAAATTCATCGTCTAAAAAAGGATAAGCTGGCCAAATTGTACATTAATAAGATTGTAAGTGCGTATGGAGCTCCCGTATCTGTTACGTCTAATAATGATTCCAAGTTTACCCTAAAGTTTTGGCTGAGTTTGCAACAAGTAATAGGCACTAATTTACATTTTAGTACCAGATTTCATCCTATGACAGATTGTCAATTAGAAAGAACCGTCAGACCTTGGAAGATATGCTTCAAGCTTGTGATTTTCAGTTCGAAGGTAATTGGGATGTTCATTTGTCATTAATGAAATTTACATATAATAATAGTTTCCATTCAAGTGTTGGAATGGCACCTTATGAGGCTTTGTATGGTAGACGTTGTAGAACCCCCATGTGTTGGGATGAAGTTGGGGAAAGAAAGTCAGAAAATGTGATTAGTAGAAAAAAGTTGAAAACAACACAAGATTGTCAAAAGAGTTATAAAGATAAGCGACGGAGAGACTTGAAATTTGAGGTTGGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAGGGTGTGGTTCATTATGGCAGAAAAGACAAGCTGAGTGCAAGATTAATTGGACCTTATGAGATATTAGAACGTATTGGGCTTGCAGCATACAATTTGGCAATGCCTATGGAACTTTCGAGGATTTGTGATGTGTTTCATGTGCGATGTAGCGTAAGTACGTTTCAGATCCATCTCATATTCTTGAAACACAACCAGTTCATTTGAAAGAGAACTTGTCTTACAAAGAGGAGCGAACACAAATTCTTGATAAGAAATAGTAGGTGCTAAGGAACTAAGTCATACCGTTAGTTAAAGTTCTTTGGGGGAACTATATTTATGAAGAAGCAATATGGGAGACTGAGCAGGCAATGAAGGCTCAATACCCACAGCGTTTCACATCATCACCA

mRNA sequence

ATGTGGAAGAAGACTCGAGTTAACAAAAAAGGGGAGTATGACAACGACAATGTTCAACAAGTCGTCCATAAAATTGATAAGCTGGCCAAATTGTACATTAATAAGATTGTAAGTGCGTATGGAGCTCCCTACCAGATTTCATCCTATGACAGATTGTCAATTAGAAAGAACCGTCAGACCTTGGAAGATATGCTTCAAGCTTGTGATTTTCAGTTCGAAGGTAATTGGGATGTTCATTTGTCATTAATGAAATTTACATATAATAATAGTTTCCATTCAAGTGTTGGAATGGCACCTTATGAGGCTTTGTATGGTAGACGTTGTAGAACCCCCATGTGTTGGGATGAAGTTGGGGAAAGAAAGTCAGAAAATGTGATTAGTAGAAAAAAGTTGAAAACAACACAAGATTGTCAAAAGAGTTATAAAGATAAGCGACGGAGAGACTTGAAATTTGAGGTTGGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAGGGTGTGGTTCATTATGGCAGAAAAGACAAGCTGAGTGCAAGATTAATTGGACCTTATGAGATATTAGAACGTATTGGGCTTGCAGCATACAATTTGGCAATGCCTATGGAACTTTCGAGGATTTGTGATGTGTTTCATGTGCGATGTAGCGTAAAAGCAATATGGGAGACTGAGCAGGCAATGAAGGCTCAATACCCACAGCGTTTCACATCATCACCA

Coding sequence (CDS)

ATGTGGAAGAAGACTCGAGTTAACAAAAAAGGGGAGTATGACAACGACAATGTTCAACAAGTCGTCCATAAAATTGATAAGCTGGCCAAATTGTACATTAATAAGATTGTAAGTGCGTATGGAGCTCCCTACCAGATTTCATCCTATGACAGATTGTCAATTAGAAAGAACCGTCAGACCTTGGAAGATATGCTTCAAGCTTGTGATTTTCAGTTCGAAGGTAATTGGGATGTTCATTTGTCATTAATGAAATTTACATATAATAATAGTTTCCATTCAAGTGTTGGAATGGCACCTTATGAGGCTTTGTATGGTAGACGTTGTAGAACCCCCATGTGTTGGGATGAAGTTGGGGAAAGAAAGTCAGAAAATGTGATTAGTAGAAAAAAGTTGAAAACAACACAAGATTGTCAAAAGAGTTATAAAGATAAGCGACGGAGAGACTTGAAATTTGAGGTTGGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAGGGTGTGGTTCATTATGGCAGAAAAGACAAGCTGAGTGCAAGATTAATTGGACCTTATGAGATATTAGAACGTATTGGGCTTGCAGCATACAATTTGGCAATGCCTATGGAACTTTCGAGGATTTGTGATGTGTTTCATGTGCGATGTAGCGTAAAAGCAATATGGGAGACTGAGCAGGCAATGAAGGCTCAATACCCACAGCGTTTCACATCATCACCA

Protein sequence

MWKKTRVNKKGEYDNDNVQQVVHKIDKLAKLYINKIVSAYGAPYQISSYDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPMCWDEVGERKSENVISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHVRCSVKAIWETEQAMKAQYPQRFTSSP

Homology

[Close]

BLAST of CSPI03G21590 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.0e-09
Identity = 50/187 (26.74%), Postives = 89/187 (47.59%), Query Frame = 0


Query: 37   VSAYGAPYQISSYDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVG 96
            V  +  PY+  + D  + R N QT+E +L+         W  H+SL++ +YNN+ HS+  
Sbjct: 1070 VMKFSLPYRPQT-DGQTERTN-QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1129

Query: 97   MAPYEALYG-----RRCRTPMCWDEVGERKSENV----ISRKKLKTTQDCQKSYKDKRRR 156
            M P+E ++           P   D+  E   E +      ++ L T     K Y D + +
Sbjct: 1130 MTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1189

Query: 157  DL-KFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRI 213
            ++ +F+ GD V +K +   G +H  + +KL+    GP+ +L++ G   Y L +P  +  +
Sbjct: 1190 EIEEFQPGDLVMVKRTK-TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1249

[Close]

BLAST of CSPI03G21590 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.0e-09
Identity = 50/187 (26.74%), Postives = 89/187 (47.59%), Query Frame = 0


Query: 37   VSAYGAPYQISSYDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVG 96
            V  +  PY+  + D  + R N QT+E +L+         W  H+SL++ +YNN+ HS+  
Sbjct: 1070 VMKFSLPYRPQT-DGQTERTN-QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1129

Query: 97   MAPYEALYG-----RRCRTPMCWDEVGERKSENV----ISRKKLKTTQDCQKSYKDKRRR 156
            M P+E ++           P   D+  E   E +      ++ L T     K Y D + +
Sbjct: 1130 MTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1189

Query: 157  DL-KFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRI 213
            ++ +F+ GD V +K +   G +H  + +KL+    GP+ +L++ G   Y L +P  +  +
Sbjct: 1190 EIEEFQPGDLVMVKRTK-TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1249

[Close]

BLAST of CSPI03G21590 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.0e-09
Identity = 50/187 (26.74%), Postives = 89/187 (47.59%), Query Frame = 0


Query: 37   VSAYGAPYQISSYDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVG 96
            V  +  PY+  + D  + R N QT+E +L+         W  H+SL++ +YNN+ HS+  
Sbjct: 1070 VMKFSLPYRPQT-DGQTERTN-QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1129

Query: 97   MAPYEALYG-----RRCRTPMCWDEVGERKSENV----ISRKKLKTTQDCQKSYKDKRRR 156
            M P+E ++           P   D+  E   E +      ++ L T     K Y D + +
Sbjct: 1130 MTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1189

Query: 157  DL-KFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRI 213
            ++ +F+ GD V +K +   G +H  + +KL+    GP+ +L++ G   Y L +P  +  +
Sbjct: 1190 EIEEFQPGDLVMVKRTK-TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1249

[Close]

BLAST of CSPI03G21590 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.0e-09
Identity = 50/187 (26.74%), Postives = 89/187 (47.59%), Query Frame = 0


Query: 37   VSAYGAPYQISSYDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVG 96
            V  +  PY+  + D  + R N QT+E +L+         W  H+SL++ +YNN+ HS+  
Sbjct: 1070 VMKFSLPYRPQT-DGQTERTN-QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1129

Query: 97   MAPYEALYG-----RRCRTPMCWDEVGERKSENV----ISRKKLKTTQDCQKSYKDKRRR 156
            M P+E ++           P   D+  E   E +      ++ L T     K Y D + +
Sbjct: 1130 MTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1189

Query: 157  DL-KFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRI 213
            ++ +F+ GD V +K +   G +H  + +KL+    GP+ +L++ G   Y L +P  +  +
Sbjct: 1190 EIEEFQPGDLVMVKRTK-TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1249

[Close]

BLAST of CSPI03G21590 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.0e-09
Identity = 50/187 (26.74%), Postives = 89/187 (47.59%), Query Frame = 0


Query: 37   VSAYGAPYQISSYDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVG 96
            V  +  PY+  + D  + R N QT+E +L+         W  H+SL++ +YNN+ HS+  
Sbjct: 1070 VMKFSLPYRPQT-DGQTERTN-QTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1129

Query: 97   MAPYEALYG-----RRCRTPMCWDEVGERKSENV----ISRKKLKTTQDCQKSYKDKRRR 156
            M P+E ++           P   D+  E   E +      ++ L T     K Y D + +
Sbjct: 1130 MTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMKKYFDMKIQ 1189

Query: 157  DL-KFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRI 213
            ++ +F+ GD V +K +   G +H  + +KL+    GP+ +L++ G   Y L +P  +  +
Sbjct: 1190 EIEEFQPGDLVMVKRTK-TGFLH--KSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHM 1249

[Close]

BLAST of CSPI03G21590 vs. ExPASy TrEMBL
Match: A0A5D3DHF7 (Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold334G00600 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 1.2e-68
Identity = 146/226 (64.60%), Postives = 166/226 (73.45%), Query Frame = 0


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISSYDRLSIRKNR-----QTLEDMLQACDFQFEG 79
           QV   +DKLAKLY++KIVS YGAP  I S DR S   ++     Q   DML+AC  QF+G
Sbjct: 334 QVTFTLDKLAKLYVDKIVSVYGAPVSIVS-DRDSRFTSKFWPSLQQALDMLRACALQFKG 393

Query: 80  NWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPMCWDEVGERK----------SEN 139
           NWD HLSLM+F YNNSFHSS+GMAPYEALYGRRCRT +CWDEVGERK          SEN
Sbjct: 394 NWDAHLSLMEFAYNNSFHSSIGMAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSEN 453

Query: 140 V-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGP 199
           V I R++LKT QD QKSY DK RRDL+FEVGDKVFLKLSPWKGV+ +GRK KLS R I P
Sbjct: 454 VKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRP 513

Query: 200 YEILERIGLAAYNLAMPMELSRICDVFHVRCSVKAIWETEQAMKAQ 230
           YEILERIG  AY LA+PMELSRI DVFHV    K + +    ++AQ
Sbjct: 514 YEILERIGPVAYRLALPMELSRIHDVFHVSMLRKYVPDPSHILEAQ 558

[Close]

BLAST of CSPI03G21590 vs. ExPASy TrEMBL
Match: A0A5A7UK27 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold460G00120 PE=4 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 6.1e-68
Identity = 156/291 (53.61%), Postives = 178/291 (61.17%), Query Frame = 0


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISSYDRLSIRKNR-----QTLEDMLQACDFQFEG 79
           +V   +DKLAKLY++KIVSAYGAP  I S DR S   ++     Q   DML+AC  QF+G
Sbjct: 483 KVTFTLDKLAKLYVDKIVSAYGAPISIVS-DRDSKFTSKFWPSLQQALDMLRACALQFKG 542

Query: 80  NWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPMCWDEVGERK----------SEN 139
           NWD HLSLM+F YNNSFHSS+GMA YEALYGR CRT +CW+EVGERK          SEN
Sbjct: 543 NWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSEN 602

Query: 140 V-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGP 199
           V I R++LKT QD +KSY DKRRRDL+FEV DKVFLKLSPWKGV+ +G+K KLS R IGP
Sbjct: 603 VKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGP 662

Query: 200 YEILERIGLAAYNLAMPMELSRICDVFHVRC----------------------------- 239
           YEILERIG   Y LA+PMELSRI DVFHV                               
Sbjct: 663 YEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEP 722

[Close]

BLAST of CSPI03G21590 vs. ExPASy TrEMBL
Match: A0A5A7T7M7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002880 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.7e-65
Identity = 140/237 (59.07%), Postives = 159/237 (67.09%), Query Frame = 0


Query: 17  NVQQVVHKIDKLAKLYINKIVSAYGAPYQISS---------------------------- 76
           N   V   +DKLAKLY++KI+SAYGAP  I S                            
Sbjct: 325 NPLPVTFTLDKLAKLYVDKIMSAYGAPVSIVSNRDSRFTSKFWPSLQQALGTKLHFSTAF 384

Query: 77  --YDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGR 136
             +      +  Q LEDML+AC  QF+GNWD HLSLM+F YNNSFHSS+GMAPYEALYGR
Sbjct: 385 HPHTDGQSERTIQILEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMAPYEALYGR 444

Query: 137 RCRTPMCWDEVGERK----------SENV-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGD 196
            CRT +CWDEVGERK          SENV I R++LKT QD +KSY DKRRRDL+FEVGD
Sbjct: 445 HCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRKKSYVDKRRRDLEFEVGD 504

Query: 197 KVFLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHV 213
           KVFLKLSPWKGV+ +GRK K+S R IGPYEILE IG  AY LA+PMELSRI DVFHV
Sbjct: 505 KVFLKLSPWKGVLRFGRKGKMSPRFIGPYEILEHIGPVAYRLALPMELSRIHDVFHV 561

[Close]

BLAST of CSPI03G21590 vs. ExPASy TrEMBL
Match: A0A5A7UD94 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold174G00330 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.8e-65
Identity = 142/252 (56.35%), Postives = 166/252 (65.87%), Query Frame = 0


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISS------------------------------- 79
           +V   +DKLAKLY++KIVSAYGAP  I S                               
Sbjct: 365 KVTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDSRFTSKFCPSLQQALGTKFHFSTAFHPH 424

Query: 80  YDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRC 139
            D LS  +  QTLEDML+AC  QF+GNWD HLSLM+F YNNSFHSS+GM PYEALYGRRC
Sbjct: 425 IDCLS-ERTIQTLEDMLRACVLQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRRC 484

Query: 140 RTPMCWDEVGERK----------SENV-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKV 199
           RTP+CWDEVGERK          SENV   R++LKT +D QK Y DK +RDL+FEV DKV
Sbjct: 485 RTPVCWDEVGERKLVGPELVQTTSENVKFIRERLKTVKDRQKRYADKHQRDLEFEVSDKV 544

Query: 200 FLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHVRCSVK 230
           FLKLSPWKGV+ +GRK+KLS + IG YEILE IG AAY+LA PMELS I DVFHV    K
Sbjct: 545 FLKLSPWKGVLRFGRKEKLSPKFIGSYEILECIGYAAYHLASPMELSSINDVFHVSMLRK 604

[Close]

BLAST of CSPI03G21590 vs. ExPASy TrEMBL
Match: A0A5D3DKK8 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold610G00610 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.8e-65
Identity = 142/252 (56.35%), Postives = 166/252 (65.87%), Query Frame = 0


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISS------------------------------- 79
           +V   +DKLAKLY++KIVSAYGAP  I S                               
Sbjct: 340 KVTFTLDKLAKLYVDKIVSAYGAPVSIVSDPDSRFTSKFCPSLQQALGTKFHFSTAFHPH 399

Query: 80  YDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRC 139
            D LS  +  QTLEDML+AC  QF+GNWD HLSLM+F YNNSFHSS+GM PYEALYGRRC
Sbjct: 400 IDCLS-ERTIQTLEDMLRACVLQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRRC 459

Query: 140 RTPMCWDEVGERK----------SENV-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKV 199
           RTP+CWDEVGERK          SENV   R++LKT +D QK Y DK +RDL+FEV DKV
Sbjct: 460 RTPVCWDEVGERKLVGPELVQTTSENVKFIRERLKTVKDRQKRYADKHQRDLEFEVSDKV 519

Query: 200 FLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHVRCSVK 230
           FLKLSPWKGV+ +GRK+KLS + IG YEILE IG AAY+LA PMELS I DVFHV    K
Sbjct: 520 FLKLSPWKGVLRFGRKEKLSPKFIGSYEILECIGYAAYHLASPMELSSINDVFHVSMLRK 579

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: KAA0042458.1 (putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK22918.1 putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 269.6 bits (688), Expect = 2.5e-68
Identity = 146/226 (64.60%), Postives = 166/226 (73.45%), Query Frame = 0


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISSYDRLSIRKNR-----QTLEDMLQACDFQFEG 79
           QV   +DKLAKLY++KIVS YGAP  I S DR S   ++     Q   DML+AC  QF+G
Sbjct: 334 QVTFTLDKLAKLYVDKIVSVYGAPVSIVS-DRDSRFTSKFWPSLQQALDMLRACALQFKG 393

Query: 80  NWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPMCWDEVGERK----------SEN 139
           NWD HLSLM+F YNNSFHSS+GMAPYEALYGRRCRT +CWDEVGERK          SEN
Sbjct: 394 NWDAHLSLMEFAYNNSFHSSIGMAPYEALYGRRCRTLVCWDEVGERKLVGPELVQITSEN 453

Query: 140 V-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGP 199
           V I R++LKT QD QKSY DK RRDL+FEVGDKVFLKLSPWKGV+ +GRK KLS R I P
Sbjct: 454 VKIIRERLKTAQDRQKSYADKGRRDLEFEVGDKVFLKLSPWKGVLRFGRKGKLSPRFIRP 513

Query: 200 YEILERIGLAAYNLAMPMELSRICDVFHVRCSVKAIWETEQAMKAQ 230
           YEILERIG  AY LA+PMELSRI DVFHV    K + +    ++AQ
Sbjct: 514 YEILERIGPVAYRLALPMELSRIHDVFHVSMLRKYVPDPSHILEAQ 558

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: KAA0056222.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK04055.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 1.3e-67
Identity = 156/291 (53.61%), Postives = 178/291 (61.17%), Query Frame = 0


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISSYDRLSIRKNR-----QTLEDMLQACDFQFEG 79
           +V   +DKLAKLY++KIVSAYGAP  I S DR S   ++     Q   DML+AC  QF+G
Sbjct: 483 KVTFTLDKLAKLYVDKIVSAYGAPISIVS-DRDSKFTSKFWPSLQQALDMLRACALQFKG 542

Query: 80  NWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRCRTPMCWDEVGERK----------SEN 139
           NWD HLSLM+F YNNSFHSS+GMA YEALYGR CRT +CW+EVGERK          SEN
Sbjct: 543 NWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSEN 602

Query: 140 V-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKVFLKLSPWKGVVHYGRKDKLSARLIGP 199
           V I R++LKT QD +KSY DKRRRDL+FEV DKVFLKLSPWKGV+ +G+K KLS R IGP
Sbjct: 603 VKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGP 662

Query: 200 YEILERIGLAAYNLAMPMELSRICDVFHVRC----------------------------- 239
           YEILERIG   Y LA+PMELSRI DVFHV                               
Sbjct: 663 YEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEP 722

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: KAA0039474.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 259.2 bits (661), Expect = 3.4e-65
Identity = 140/237 (59.07%), Postives = 159/237 (67.09%), Query Frame = 0


Query: 17  NVQQVVHKIDKLAKLYINKIVSAYGAPYQISS---------------------------- 76
           N   V   +DKLAKLY++KI+SAYGAP  I S                            
Sbjct: 325 NPLPVTFTLDKLAKLYVDKIMSAYGAPVSIVSNRDSRFTSKFWPSLQQALGTKLHFSTAF 384

Query: 77  --YDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGR 136
             +      +  Q LEDML+AC  QF+GNWD HLSLM+F YNNSFHSS+GMAPYEALYGR
Sbjct: 385 HPHTDGQSERTIQILEDMLRACALQFKGNWDAHLSLMEFAYNNSFHSSIGMAPYEALYGR 444

Query: 137 RCRTPMCWDEVGERK----------SENV-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGD 196
            CRT +CWDEVGERK          SENV I R++LKT QD +KSY DKRRRDL+FEVGD
Sbjct: 445 HCRTLVCWDEVGERKLVGPELVQITSENVKIIRERLKTAQDRKKSYVDKRRRDLEFEVGD 504

Query: 197 KVFLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHV 213
           KVFLKLSPWKGV+ +GRK K+S R IGPYEILE IG  AY LA+PMELSRI DVFHV
Sbjct: 505 KVFLKLSPWKGVLRFGRKGKMSPRFIGPYEILEHIGPVAYRLALPMELSRIHDVFHV 561

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: KAA0051511.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 257.7 bits (657), Expect = 9.9e-65
Identity = 142/252 (56.35%), Postives = 166/252 (65.87%), Query Frame = 0


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISS------------------------------- 79
           +V   +DKLAKLY++KIVSAYGAP  I S                               
Sbjct: 365 KVTFTLDKLAKLYVDKIVSAYGAPVSIVSDRDSRFTSKFCPSLQQALGTKFHFSTAFHPH 424

Query: 80  YDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRC 139
            D LS  +  QTLEDML+AC  QF+GNWD HLSLM+F YNNSFHSS+GM PYEALYGRRC
Sbjct: 425 IDCLS-ERTIQTLEDMLRACVLQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRRC 484

Query: 140 RTPMCWDEVGERK----------SENV-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKV 199
           RTP+CWDEVGERK          SENV   R++LKT +D QK Y DK +RDL+FEV DKV
Sbjct: 485 RTPVCWDEVGERKLVGPELVQTTSENVKFIRERLKTVKDRQKRYADKHQRDLEFEVSDKV 544

Query: 200 FLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHVRCSVK 230
           FLKLSPWKGV+ +GRK+KLS + IG YEILE IG AAY+LA PMELS I DVFHV    K
Sbjct: 545 FLKLSPWKGVLRFGRKEKLSPKFIGSYEILECIGYAAYHLASPMELSSINDVFHVSMLRK 604

[Close]

BLAST of CSPI03G21590 vs. NCBI nr
Match: TYK24155.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 257.7 bits (657), Expect = 9.9e-65
Identity = 142/252 (56.35%), Postives = 166/252 (65.87%), Query Frame = 0


Query: 20  QVVHKIDKLAKLYINKIVSAYGAPYQISS------------------------------- 79
           +V   +DKLAKLY++KIVSAYGAP  I S                               
Sbjct: 340 KVTFTLDKLAKLYVDKIVSAYGAPVSIVSDPDSRFTSKFCPSLQQALGTKFHFSTAFHPH 399

Query: 80  YDRLSIRKNRQTLEDMLQACDFQFEGNWDVHLSLMKFTYNNSFHSSVGMAPYEALYGRRC 139
            D LS  +  QTLEDML+AC  QF+GNWD HLSLM+F YNNSFHSS+GM PYEALYGRRC
Sbjct: 400 IDCLS-ERTIQTLEDMLRACVLQFKGNWDAHLSLMEFAYNNSFHSSIGMTPYEALYGRRC 459

Query: 140 RTPMCWDEVGERK----------SENV-ISRKKLKTTQDCQKSYKDKRRRDLKFEVGDKV 199
           RTP+CWDEVGERK          SENV   R++LKT +D QK Y DK +RDL+FEV DKV
Sbjct: 460 RTPVCWDEVGERKLVGPELVQTTSENVKFIRERLKTVKDRQKRYADKHQRDLEFEVSDKV 519

Query: 200 FLKLSPWKGVVHYGRKDKLSARLIGPYEILERIGLAAYNLAMPMELSRICDVFHVRCSVK 230
           FLKLSPWKGV+ +GRK+KLS + IG YEILE IG AAY+LA PMELS I DVFHV    K
Sbjct: 520 FLKLSPWKGVLRFGRKEKLSPKFIGSYEILECIGYAAYHLASPMELSSINDVFHVSMLRK 579

The following BLAST results are available for this feature:

BLAST of CSPI03G21590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	8.0e-09	26.74	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	8.0e-09	26.74	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	8.0e-09	26.74	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	8.0e-09	26.74	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	8.0e-09	26.74	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI03G21590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DHF7	1.2e-68	64.60	Putative DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=...	[more]
A0A5A7UK27	6.1e-68	53.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46...	[more]
A0A5A7T7M7	1.7e-65	59.07	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64...	[more]
A0A5A7UD94	4.8e-65	56.35	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17...	[more]
A0A5D3DKK8	4.8e-65	56.35	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of CSPI03G21590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042458.1	2.5e-68	64.60	putative DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK...	[more]
KAA0056222.1	1.3e-67	53.61	reverse transcriptase [Cucumis melo var. makuwa] >TYK04055.1 reverse transcripta...	[more]
KAA0039474.1	3.4e-65	59.07	reverse transcriptase [Cucumis melo var. makuwa]	[more]
KAA0051511.1	9.9e-65	56.35	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK24155.1	9.9e-65	56.35	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI03G21590 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 5..147 e-value: 4.5E-11 score: 44.4
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 61..213
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 61..213
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 56..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G21590.1	CSPI03G21590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity