Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAATCAAAAGCAAAGTTCTACCTGACTTGTCTAAACTGGAGCCACTCGACGGAACAAACTACCGCCGCTGGTCCCAGAAGTTATCGATCTTTTTCGAACAACTTGAAGTCGATTATGTTCTCATCGTCAAACCGCCAATCGATCCTCTAGCACCACCAATCAATCTTCCAGCACCTTCTGATCCAAAATCTTCCACGGGATCCATTGTCGTCACTACTGACCAGGTAAAGGAAGCATCTACAATTGATCCCAAGAAGTACAAGAAGGACAACAAGATTGTTCGTGGGCATCTGTTGAACCATATGTTGGATCCCGTGTTTGACTTATTTGTAATCCAAAAATCTGTCAAGACATCTGGTGCATTATGGAGTCTCGCTATGGTGAAGACGACGCAGAGAGAAAGAAGTACGTTGTGGAAAAATGGCTGCAATTTCAAATGATAGATGATAAGCCAATTGTGGAGCAGATACATGAGTATGAAAACCTTGTGGCCAATGTCCTATCTGAAGGTATGAAGATGTGTAAGATACTTCAAGCAAATGTTTTACTGGAAAAATTTTCACCCTCTTGGACCGACTACCAAAATTACTTGAAGCACAAGAAGAAAGATCTGAAACTCCAAGATCTTATAAGCCACATGCGTACAGAAGAGGCCAACTGA
mRNA sequence
ATGTCAATCAAAAGCAAAGTTCTACCTGACTTGTCTAAACTGGAGCCACTCGACGGAACAAACTACCGCCGCTGGTCCCAGAAGTTATCGATCTTTTTCGAACAACTTGAAGTCGATTATGTTCTCATCGTCAAACCGCCAATCGATCCTCTAGCACCACCAATCAATCTTCCAGCACCTTCTGATCCAAAATCTTCCACGGGATCCATTGTCGTCACTACTGACCAGGTAAAGGAAGCATCTACAATTGATCCCAAGAAGTACAAGAAGGACAACAAGATTGTTCGTGGGCATCTGTTGAACCATATGTTGGATCCCTCTCGCTATGGTGAAGACGACGCAGAGAGAAAGAAGTACGTTGTGGAAAAATGGCTGCAATTTCAAATGATAGATGATAAGCCAATTGTGGAGCAGATACATGAGTATGAAAACCTTGTGGCCAATGTCCTATCTGAAGGTATGAAGATGTGTAAGATACTTCAAGCAAATGTTTTACTGGAAAAATTTTCACCCTCTTGGACCGACTACCAAAATTACTTGAAGCACAAGAAGAAAGATCTGAAACTCCAAGATCTTATAAGCCACATGCGTACAGAAGAGGCCAACTGA
Coding sequence (CDS)
ATGTCAATCAAAAGCAAAGTTCTACCTGACTTGTCTAAACTGGAGCCACTCGACGGAACAAACTACCGCCGCTGGTCCCAGAAGTTATCGATCTTTTTCGAACAACTTGAAGTCGATTATGTTCTCATCGTCAAACCGCCAATCGATCCTCTAGCACCACCAATCAATCTTCCAGCACCTTCTGATCCAAAATCTTCCACGGGATCCATTGTCGTCACTACTGACCAGGTAAAGGAAGCATCTACAATTGATCCCAAGAAGTACAAGAAGGACAACAAGATTGTTCGTGGGCATCTGTTGAACCATATGTTGGATCCCTCTCGCTATGGTGAAGACGACGCAGAGAGAAAGAAGTACGTTGTGGAAAAATGGCTGCAATTTCAAATGATAGATGATAAGCCAATTGTGGAGCAGATACATGAGTATGAAAACCTTGTGGCCAATGTCCTATCTGAAGGTATGAAGATGTGTAAGATACTTCAAGCAAATGTTTTACTGGAAAAATTTTCACCCTCTTGGACCGACTACCAAAATTACTTGAAGCACAAGAAGAAAGATCTGAAACTCCAAGATCTTATAAGCCACATGCGTACAGAAGAGGCCAACTGA
Protein sequence
MSIKSKVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLPAPSDPKSSTGSIVVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDPSRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMCKILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN*
Homology
BLAST of CSPI03G21340 vs. ExPASy TrEMBL
Match:
A0A5D3DSQ3 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00930 PE=4 SV=1)
HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77
Identity = 159/225 (70.67%), Postives = 171/225 (76.00%), Query Frame = 0
Query: 1 MSIKS--KVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK+ K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSYKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLP--TFDPPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + + TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAIAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF PSW DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. ExPASy TrEMBL
Match:
A0A5A7TG73 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007360 PE=4 SV=1)
HSP 1 Score: 298.5 bits (763), Expect = 2.1e-77
Identity = 159/225 (70.67%), Postives = 171/225 (76.00%), Query Frame = 0
Query: 1 MSIKS--KVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK+ K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSYKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLP--TFDPPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + + TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAIAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF PSW DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. ExPASy TrEMBL
Match:
A0A5A7U9X9 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00270 PE=4 SV=1)
HSP 1 Score: 298.1 bits (762), Expect = 2.7e-77
Identity = 159/225 (70.67%), Postives = 171/225 (76.00%), Query Frame = 0
Query: 1 MSIK--SKVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK +K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSD--PPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + V TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP++EQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVMEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF PSW DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. ExPASy TrEMBL
Match:
A0A5D3BZI1 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00770 PE=4 SV=1)
HSP 1 Score: 298.1 bits (762), Expect = 2.7e-77
Identity = 159/225 (70.67%), Postives = 171/225 (76.00%), Query Frame = 0
Query: 1 MSIK--SKVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK +K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSD--PPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + V TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP++EQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVMEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF PSW DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. ExPASy TrEMBL
Match:
A0A5A7TMS2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G002600 PE=4 SV=1)
HSP 1 Score: 297.0 bits (759), Expect = 6.1e-77
Identity = 159/225 (70.67%), Postives = 170/225 (75.56%), Query Frame = 0
Query: 1 MSIK--SKVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK +K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTPD--PPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + V TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLKSRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF P W DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPCWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. NCBI nr
Match:
KAA0042223.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 298.5 bits (763), Expect = 4.3e-77
Identity = 159/225 (70.67%), Postives = 171/225 (76.00%), Query Frame = 0
Query: 1 MSIKS--KVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK+ K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSYKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLP--TFDPPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + + TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAIAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF PSW DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. NCBI nr
Match:
TYK26791.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 298.5 bits (763), Expect = 4.3e-77
Identity = 159/225 (70.67%), Postives = 171/225 (76.00%), Query Frame = 0
Query: 1 MSIKS--KVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK+ K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSYKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLP--TFDPPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + + TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAIAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF PSW DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. NCBI nr
Match:
TYK04394.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 298.1 bits (762), Expect = 5.7e-77
Identity = 159/225 (70.67%), Postives = 171/225 (76.00%), Query Frame = 0
Query: 1 MSIK--SKVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK +K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSD--PPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + V TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP++EQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVMEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF PSW DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. NCBI nr
Match:
KAA0051006.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 298.1 bits (762), Expect = 5.7e-77
Identity = 159/225 (70.67%), Postives = 171/225 (76.00%), Query Frame = 0
Query: 1 MSIK--SKVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK +K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTSD--PPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + V TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP++EQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLESRYGGDDAGRKKYVVGKWLQFQMTDDKPVMEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF PSW DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPSWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. NCBI nr
Match:
KAA0043346.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 297.0 bits (759), Expect = 1.3e-76
Identity = 159/225 (70.67%), Postives = 170/225 (75.56%), Query Frame = 0
Query: 1 MSIK--SKVLPDLSKLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLP 60
MSIK +K+LPDLSKLEPLDGTNYRRWSQKL IFFEQLEVDYVL P PP
Sbjct: 1 MSIKTSNKILPDLSKLEPLDGTNYRRWSQKLLIFFEQLEVDYVLTTDLPTPD--PPTTTS 60
Query: 61 APSDPKSSTGSI--VVTTDQVKEASTIDPKKYKKDNKIVRGHLLNHMLDP---------- 120
SDP+SSTG + V TDQVK+ IDP+KY KDNK VRGHLLNHM DP
Sbjct: 61 TSSDPESSTGPLTAVAVTDQVKKDQVIDPEKYAKDNKTVRGHLLNHMSDPMFDLFVVQKS 120
Query: 121 ---------SRYGEDDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMC 180
SRYG DDA RKKYVV KWLQFQM DDKP+VEQIHEYENLVANVLSEGMKMC
Sbjct: 121 AKDIWSTLKSRYGGDDAGRKKYVVGKWLQFQMTDDKPVVEQIHEYENLVANVLSEGMKMC 180
Query: 181 KILQANVLLEKFSPSWTDYQNYLKHKKKDLKLQDLISHMRTEEAN 203
+ILQANVLLEKF P W DY+N+LKHKKKDLKLQ+LISHMRTEEAN
Sbjct: 181 EILQANVLLEKFPPCWNDYRNHLKHKKKDLKLQELISHMRTEEAN 223
BLAST of CSPI03G21340 vs. TAIR 10
Match:
AT4G00980.1 (zinc knuckle (CCHC-type) family protein )
HSP 1 Score: 75.1 bits (183), Expect = 7.3e-14
Identity = 50/210 (23.81%), Postives = 101/210 (48.10%), Query Frame = 0
Query: 13 KLEPLDGTNYRRWSQKLSIFFEQLEVDYVLIVKPPIDPLAPPINLPAPSDPKSSTGSIVV 72
K+ DG +Y W+ ++ +F +QL++ YVL S+P S GS
Sbjct: 194 KISRFDGKSYLYWASQMELFLKQLKLTYVL------------------SEPCPSIGSSQG 253
Query: 73 TTDQVKEASTIDP--KKYKKDNKIVRGHLLNHMLDP--SRYGE----------------- 132
+E + D KK+ +D+ + HL+N + D RY +
Sbjct: 254 PETNPREITRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKWVYQ 313
Query: 133 -DDAERKKYVVEKWLQFQMIDDKPIVEQIHEYENLVANVLSEGMKMCKILQANVLLEKFS 192
D+++ K+ V K+++F+M++++PI+EQ+ + + +++S GM + + + ++ KF
Sbjct: 314 CDESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIISKFP 373
Query: 193 PSWTDYQNYLKHKKKDLKLQDLISHMRTEE 201
PSW + L +++ L + L+ ++ EE
Sbjct: 374 PSWRGFCTRLM-EEEYLPVWMLMERVKAEE 384
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3DSQ3 | 2.1e-77 | 70.67 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7TG73 | 2.1e-77 | 70.67 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7U9X9 | 2.7e-77 | 70.67 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3BZI1 | 2.7e-77 | 70.67 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7TMS2 | 6.1e-77 | 70.67 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
Match Name | E-value | Identity | Description | |
KAA0042223.1 | 4.3e-77 | 70.67 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK26791.1 | 4.3e-77 | 70.67 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYK04394.1 | 5.7e-77 | 70.67 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0051006.1 | 5.7e-77 | 70.67 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0043346.1 | 1.3e-76 | 70.67 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT4G00980.1 | 7.3e-14 | 23.81 | zinc knuckle (CCHC-type) family protein | [more] |