CSPI03G21110 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G21110
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Unknown protein
Location	Chr3: 17163179 .. 17165794 (+)
RNA-Seq Expression	CSPI03G21110
Synteny	CSPI03G21110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGGATCCCCTCATTCTTCTTCCTTCCCAAATCCTTAGGCCCATTCCTCCGCCTCCCATAGCCGTTATCAAAACCAGAAACGGCAATGGCGACTGCACCAGCGCTGATGATACCAGCCGCCATGGCGATGATGCTTATGATGCTCATTCCAACTGCATGCGGCGGTGCTCTTACATCCTTTAAACCACTCAACAACCACACTTCCGGGGGTAAGTTTGCCAATAAATTTTAAATCTTTTTTTATTCAGCAAAATACTTCTAATAAATACTTAGACGAGGAGCTTCCTTTCCTTCAAATGCTCATTTTGGTTATTCATACGTTCTACTTTTTAGATTTGCTCTAATACTTAATCTTTACACATTATCAAAAAGTCAATTTTATTAGTACTCTACTTTTAAGATTAGTGTCTAATAAGTTTACAAAAACTAAAAATGTATTTTAACTTCACTTTGGCATTGAAAACATAATTATATCTTTATTTATATGTAAATATATATCATCCTTAATATATTTAAAAGACTAAAATTATAATTATAATTATAGTTTTTAAATCTTTAAACTTTAAAAAATCTATGTAACAAGTCTTTCTTGAACTTTAAGCGTCATTTGTTTCCGAATTCATTTTCATTCTTGCGTTTTCAAAATTTAAAAAAATATAAAAAATAATTAAAACGTGTTTGATATACTTTTTCAAAAACTATTTTATAGAAGAAAGTAGAAATTTTCAAATAATAAATTATCATTTTTGAAAATAATAAAAGAAAATTTTTAAAAATAACAAGTTTTACAAAATACTTACCATCTATAGCAAATTATAGTTATCGATATGTTATAGTGATAGTAGACTATCAAAATTTTGCTACAGCTTGTAAATATTTTAATTTATTTTGCTATTTTTAAAAATATCTTTTTTTTTTTATCATATATCCAAACTATCCGTTCCAAACTCTTTCGGTATTCACTTCATTTTTACATATCTTACCTGATCTTTTTTTTTTTCATCTTTACAGAATTTAAAATTTGCACCATCTCATATTACACAAATGGGAGAAACTTGAAAAGATAATTGATAAATCTAGTTTGATAATTGATAAAAATTCAAATTAAAAATTCATGTAAACATAAATTAGTTCTAAGATTTGCAAGATAATACAAGATTAATAAAGATGGCTGAAGAAAAATTGAGAGGATAATTTGAAAGATGGCATAATATGTGAAAAGTTAGGTCGTTTTCAGTGTTCATCATAGACAAATTAGCATGGACCAAGATCCTGAATATATATTTGCACTTTCTTGGTAAAGTCTTAGACATAATAAACACCAAAATTCTACATATTTGAGCTTTGATGAAATCTTGCACAGATAAACATCTAAATCTTACTTAATGTATAGAAAATTTTGATCTTTTCTAAAATTTGAAGATGTCAATGAAGTCATCGTCTAAAATCTATTTTTATCATTAGTAAGTTCATATGAAAATTTGAAAAATTATTTAAGATTGGACAAAGATAATTAGAAATTTTTTAAGAGACCAAAGATTTGGATGAGATTTGAAAAGATTAAATAACATTTAAAATATTTAGTAGAATCTCATTATAAATCCTACAGAGATTTCACTAAGAAAGTTCAAAATACTTTACAACAGAAAAGTTAACTTTACTTGACTAAATCTCGAACAAAAAAGAAAAAAGAGTTTAACATATTTTCGAAGTGTTAGTCTTAAAAAGTTAAACTTAAAAAACCATTTATGATAATTTTCTACAACAAAAGCTTCACAATAATATAATTTTGTTCAAAACAAAAGAAACTTTTGGATTGGGTGTCTAAGTTTTCAAAATGCACCTATGACTAAAAGCATATTTACCAAAAATCGAACTTTTTCATTGTTTTTAGATAAGTTAAAAATCATTTTTAGTTCCTAAGCTTTTATAAAAATGACAATTTAGTTGTTGTATTTTAAATTTTATAATAATTTATATGGCGATCTTATTATAGAGAAAATTTATTTTAACTTCTAACATTGTATATCTATTGTTTGACCACAAGTTTTTATTTATTTATTTATTTTTGTATTTAAGAAAGTATAAATTATAAAATTTTTGTGTTTGTGTGGAAGGTGGTTGAGAAGTTAGAAAATGATGGAATACGTAAATGATTATGATGGAAACACTAAAATAATGAAAATTGAACACAAATTGGAAAAAAAAAAAAATTGTTTGTTTGATTAGGTTTAGTAAAATACATGGTTGAAGAGGAGGATATTAAATCAAATTTCGTAATGGAGTCGCACATCAGCAGAATGTTGGCCGATTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCGCCGGCGAATGCGACCGGCCGCCCCGCTACGACAGCTGCCTCGGCGTTAAAAGGAATACTCCGCCACCACAAAATTGTAGCACCTTCAATCGTGAACATCCCTGTTAGTTCATAATTAAATACAAACCCTATCTTTAATTTTATTTTAGTTATAAGGTTAAAATGCTACTTTCTTTTTCTTTTTTCTTTTAATTAATTAATGTACTTTCATATTTGTTCTATTTTACTTTATATATTTCTAAAATTGTTCACT

mRNA sequence

CAAAAGGATCCCCTCATTCTTCTTCCTTCCCAAATCCTTAGGCCCATTCCTCCGCCTCCCATAGCCGTTATCAAAACCAGAAACGGCAATGGCGACTGCACCAGCGCTGATGATACCAGCCGCCATGGCGATGATGCTTATGATGCTCATTCCAACTGCATGCGGCGGTGCTCTTACATCCTTTAAACCACTCAACAACCACACTTCCGGGGGTTTAGTAAAATACATGGTTGAAGAGGAGGATATTAAATCAAATTTCGTAATGGAGTCGCACATCAGCAGAATGTTGGCCGATTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCGCCGGCGAATGCGACCGGCCGCCCCGCTACGACAGCTGCCTCGGCGTTAAAAGGAATACTCCGCCACCACAAAATTGTAGCACCTTCAATCGTGAACATCCCTGTTAGTTCATAATTAAATACAAACCCTATCTTTAATTTTATTTTAGTTATAAGGTTAAAATGCTACTTTCTTTTTCTTTTTTCTTTTAATTAATTAATGTACTTTCATATTTGTTCTATTTTACTTTATATATTTCTAAAATTGTTCACT

Coding sequence (CDS)

ATGGCGACTGCACCAGCGCTGATGATACCAGCCGCCATGGCGATGATGCTTATGATGCTCATTCCAACTGCATGCGGCGGTGCTCTTACATCCTTTAAACCACTCAACAACCACACTTCCGGGGGTTTAGTAAAATACATGGTTGAAGAGGAGGATATTAAATCAAATTTCGTAATGGAGTCGCACATCAGCAGAATGTTGGCCGATTCTCAAGACTTCGAAACAAGCTCAACTAACAACGCCACCCAAGTTTCCGCCGGCGAATGCGACCGGCCGCCCCGCTACGACAGCTGCCTCGGCGTTAAAAGGAATACTCCGCCACCACAAAATTGTAGCACCTTCAATCGTGAACATCCCTGTTAG

Protein sequence

MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC*

Homology

[Close]

BLAST of CSPI03G21110 vs. ExPASy TrEMBL
Match: A0A0A0L711 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 2.4e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60
           MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME
Sbjct: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60

Query: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120
           SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC
Sbjct: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]

BLAST of CSPI03G21110 vs. ExPASy TrEMBL
Match: A0A6J1KBP5 (uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 4.7e-32
Identity = 74/117 (63.25%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63
           A A+MIPAAMA+M+++L PT+   ALT+FKPLNN TS    KY++ ++DI S F+MESHI
Sbjct: 3   AAAVMIPAAMAIMILLLNPTS-SDALTTFKPLNNDTSAA-GKYLIGDQDIDSEFLMESHI 62

Query: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           SR+LA SQDF+TS TN+A + S G C+RPPRYDSCLG K N PPP+NC TFNR +PC
Sbjct: 63  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of CSPI03G21110 vs. ExPASy TrEMBL
Match: A0A6J1G927 (uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC111452044 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30
Identity = 72/117 (61.54%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63
           A A++IPAAMA+M+++L PT    ALTSFKPLNN TS    KY++ ++D+ S F+MESHI
Sbjct: 3   AAAVIIPAAMAIMILLLNPTT-SDALTSFKPLNNDTSAA-GKYLIGDQDLDSEFLMESHI 62

Query: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           SR+LA SQ+F+TS TN+A + S G C RPPRYDSCLG K N PPP+NC TFNR +PC
Sbjct: 63  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of CSPI03G21110 vs. ExPASy TrEMBL
Match: A0A0A0LCJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 71/119 (59.66%), Postives = 94/119 (78.99%), Query Frame = 0


Query: 4   APALMIPAAMAMMLMML-IPTACGGALTSFKP-LNNHTSGGLVKYMVEEEDIKSNFVMES 63
           A ALMIPAA+  M+++L IP++C  ALT+F+P L+NH+S G  K M+ EED++  F+MES
Sbjct: 3   ASALMIPAAVVTMILLLHIPSSC-DALTTFQPLLSNHSSYG-GKLMMGEEDMELEFLMES 62

Query: 64  HISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           HISR+LA S++++T+ST NA + S G CDRPPRYDSCLG KRN PPP NCS +NR +PC
Sbjct: 63  HISRILASSKNYQTASTTNANKASGGGCDRPPRYDSCLGKKRNNPPPPNCSPYNRANPC 119

[Close]

BLAST of CSPI03G21110 vs. ExPASy TrEMBL
Match: A0A5D3BS53 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002320 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 7.7e-27
Identity = 71/119 (59.66%), Postives = 91/119 (76.47%), Query Frame = 0


Query: 4   APALMIPAAMAMMLMML-IPTACGGALTSFKP-LNNHTSGGLVKYMVEEEDIKSNFVMES 63
           A A MIPAA+  M+++L IP++C  ALT+F+P L+NHTS G  + MV EED+   F+MES
Sbjct: 3   ASATMIPAAVVTMILLLNIPSSC-EALTTFEPLLSNHTSYG-EQLMVGEEDMDMEFIMES 62

Query: 64  HISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           HISR+LA SQ+F+T+ST +A + S G C RPPRYDSCLG KRN PPP NC T+NR +PC
Sbjct: 63  HISRILASSQNFQTTSTVDANKASGGGCGRPPRYDSCLGQKRNNPPPPNCGTYNRANPC 119

[Close]

BLAST of CSPI03G21110 vs. NCBI nr
Match: XP_011651393.1 (uncharacterized protein LOC105434882 [Cucumis sativus] >KGN57780.1 hypothetical protein Csa_009536 [Cucumis sativus])

HSP 1 Score: 241.1 bits (614), Expect = 4.9e-60
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0


Query: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60
           MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME
Sbjct: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60

Query: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120
           SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC
Sbjct: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120

[Close]

BLAST of CSPI03G21110 vs. NCBI nr
Match: XP_022998105.1 (uncharacterized protein LOC111492854 [Cucurbita maxima])

HSP 1 Score: 147.1 bits (370), Expect = 9.6e-32
Identity = 74/117 (63.25%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63
           A A+MIPAAMA+M+++L PT+   ALT+FKPLNN TS    KY++ ++DI S F+MESHI
Sbjct: 3   AAAVMIPAAMAIMILLLNPTS-SDALTTFKPLNNDTSAA-GKYLIGDQDIDSEFLMESHI 62

Query: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           SR+LA SQDF+TS TN+A + S G C+RPPRYDSCLG K N PPP+NC TFNR +PC
Sbjct: 63  SRILAGSQDFQTSKTNDANKASGGGCERPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of CSPI03G21110 vs. NCBI nr
Match: KAG6607029.1 (hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036725.1 hypothetical protein SDJN02_00345, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 143.3 bits (360), Expect = 1.4e-30
Identity = 73/117 (62.39%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63
           A A++IPAAMA+M+++L PT    ALTSFKPLNN TS    KY++ ++DI S F+MESHI
Sbjct: 3   AAAVIIPAAMAIMILLLNPTT-SDALTSFKPLNNDTSAA-GKYLIGDQDIDSEFLMESHI 62

Query: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           SR+LA SQ+F+TS TN+A + S G C RPPRYDSCLG K N PPP+NC TFNR +PC
Sbjct: 63  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of CSPI03G21110 vs. NCBI nr
Match: XP_022948338.1 (uncharacterized protein LOC111452044 [Cucurbita moschata])

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-30
Identity = 72/117 (61.54%), Postives = 91/117 (77.78%), Query Frame = 0


Query: 4   APALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVMESHI 63
           A A++IPAAMA+M+++L PT    ALTSFKPLNN TS    KY++ ++D+ S F+MESHI
Sbjct: 3   AAAVIIPAAMAIMILLLNPTT-SDALTSFKPLNNDTSAA-GKYLIGDQDLDSEFLMESHI 62

Query: 64  SRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 121
           SR+LA SQ+F+TS TN+A + S G C RPPRYDSCLG K N PPP+NC TFNR +PC
Sbjct: 63  SRILAGSQNFQTSKTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

[Close]

BLAST of CSPI03G21110 vs. NCBI nr
Match: XP_023523220.1 (uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.4 bits (355), Expect = 5.3e-30
Identity = 76/120 (63.33%), Postives = 93/120 (77.50%), Query Frame = 0


Query: 1   MATAPALMIPAAMAMMLMMLIPTACGGALTSFKPLNNHTSGGLVKYMVEEEDIKSNFVME 60
           MATA A MIPAAMA+M+++L P     ALTSFKPLNN TS    KY++ ++DI S F+ME
Sbjct: 1   MATA-AAMIPAAMAIMILLLNPIN-SDALTSFKPLNNDTSAA-GKYLIGDQDIDSEFLME 60

Query: 61  SHISRMLADSQDFETSSTNNATQVSAGECDRPPRYDSCLGVKRNTPPPQNCSTFNREHPC 120
           SHISR+LA SQ+F+TS+TN+A + S G C RPPRYDSCLG K N PPP+NC TFNR +PC
Sbjct: 61  SHISRILAGSQNFQTSNTNDANKASGGGCGRPPRYDSCLGQKSNNPPPENCGTFNRNNPC 117

The following BLAST results are available for this feature:

BLAST of CSPI03G21110 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI03G21110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L711	2.4e-60	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298570 PE=4 SV=1	[more]
A0A6J1KBP5	4.7e-32	63.25	uncharacterized protein LOC111492854 OS=Cucurbita maxima OX=3661 GN=LOC111492854...	[more]
A0A6J1G927	1.1e-30	61.54	uncharacterized protein LOC111452044 OS=Cucurbita moschata OX=3662 GN=LOC1114520...	[more]
A0A0A0LCJ4	1.2e-27	59.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G298580 PE=4 SV=1	[more]
A0A5D3BS53	7.7e-27	59.66	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CSPI03G21110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651393.1	4.9e-60	100.00	uncharacterized protein LOC105434882 [Cucumis sativus] >KGN57780.1 hypothetical ...	[more]
XP_022998105.1	9.6e-32	63.25	uncharacterized protein LOC111492854 [Cucurbita maxima]	[more]
KAG6607029.1	1.4e-30	62.39	hypothetical protein SDJN03_00371, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022948338.1	2.4e-30	61.54	uncharacterized protein LOC111452044 [Cucurbita moschata]	[more]
XP_023523220.1	5.3e-30	63.33	uncharacterized protein LOC111787479 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI03G21110 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 103..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G21110.1	CSPI03G21110.1	mRNA