CSPI03G20750 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTAATCAAGCAAGAATTGACTATCGGATTCGATTATGTGCAACAATTGATTGTGCTCGATTTTTGTTACAACAAGGTCTTCCATTTCGTGGGCACGATGAAACTGAAGATTCAAAAAATCAAGGTAATTTTTTTGAACTCCTACAATGGTTATGCAACCATAATAAAGATATTGAAGCTGTTTCTTTGAGAAACGCTTCTGAAAACATGAAAATGACTACACCAGACATATTGTGAATTGTATTGTTGTAGAAATAGTCAATGGAATCATACGAGATATTGGTGATAAGTTGTTTTTAATTTTGATAGATGAATCGAATGATATATCTTCAAAGGAGCAAATGTCAATTGTGTTGAGAAATGTAGACAAATGGTGTGTGATTGAACGATTTGTTGGTATTGTCCATGTTATCAATACAAGTTCATTATCACTCAAAGAAGCTATTAATGGATTCTTTTCTATACATGGATTAAGCATGACGAGTTTGTGAAAACAAGGTTATGATGGAGCAAGTAATATGCAAGGAGAATTTAATGGATTGAAAACTTTAATTTGGAGAGAAAATGAATGTGCATTTTACATTCATTGTTTCTCTCACCAACTTTAATTAACTTTGGTAGCTATTACAAAAAATCATGTAGAGATTGCTGGTCTTTTTATTTTCGTTGTAAATGTGGTGAATGTTATTAGTGCATTAGCAAAACATCGAGACATGCTAAGAGAGAAATATAGTGCCAACACTTTTGAAGCTTTGAATAATGGTGAACTGTCAAGTGGAAAAGGATTAAATCAGGAAACAATGATCAAACGACCAGGAGATACACGATAG ATGTCTAATCAAGCAAGAATTGACTATCGGATTCGATTATGTGCAACAATTGATTGTGCTCGATTTTTGTTACAACAAGGTCTTCCATTTCGTGGGCACGATGAAACTGAAGATTCAAAAAATCAAGAGATTGCTGGTCTTTTTATTTTCGTTGTAAATGTGGTGAATGTTATTAGTGCATTAGCAAAACATCGAGACATGCTAAGAGAGAAATATAGTGCCAACACTTTTGAAGCTTTGAATAATGGTGAACTGTCAAGTGGAAAAGGATTAAATCAGGAAACAATGATCAAACGACCAGGAGATACACGATAG ATGTCTAATCAAGCAAGAATTGACTATCGGATTCGATTATGTGCAACAATTGATTGTGCTCGATTTTTGTTACAACAAGGTCTTCCATTTCGTGGGCACGATGAAACTGAAGATTCAAAAAATCAAGAGATTGCTGGTCTTTTTATTTTCGTTGTAAATGTGGTGAATGTTATTAGTGCATTAGCAAAACATCGAGACATGCTAAGAGAGAAATATAGTGCCAACACTTTTGAAGCTTTGAATAATGGTGAACTGTCAAGTGGAAAAGGATTAAATCAGGAAACAATGATCAAACGACCAGGAGATACACGATAG MSNQARIDYRIRLCATIDCARFLLQQGLPFRGHDETEDSKNQEIAGLFIFVVNVVNVISALAKHRDMLREKYSANTFEALNNGELSSGKGLNQETMIKRPGDTR* Homology
BLAST of CSPI03G20750 vs. ExPASy TrEMBL
Match: A0A1S3CPC9 (uncharacterized protein LOC103503287 OS=Cucumis melo OX=3656 GN=LOC103503287 PE=4 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 2.3e-27 Identity = 93/242 (38.43%), Postives = 98/242 (40.50%), Query Frame = 0
BLAST of CSPI03G20750 vs. ExPASy TrEMBL
Match: A0A1S3BM43 (uncharacterized protein LOC103491145 OS=Cucumis melo OX=3656 GN=LOC103491145 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.3e-25 Identity = 73/136 (53.68%), Postives = 76/136 (55.88%), Query Frame = 0
BLAST of CSPI03G20750 vs. ExPASy TrEMBL
Match: A0A6P5U698 (zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110774420 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 1.3e-14 Identity = 66/204 (32.35%), Postives = 78/204 (38.24%), Query Frame = 0
BLAST of CSPI03G20750 vs. ExPASy TrEMBL
Match: A0A6P5TRY7 (uncharacterized protein LOC110770113 OS=Prunus avium OX=42229 GN=LOC110770113 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 5.5e-13 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of CSPI03G20750 vs. ExPASy TrEMBL
Match: A0A5E4G917 (PREDICTED: zinc finger MYM-type 1 (Fragment) OS=Prunus dulcis OX=3755 GN=ALMOND_2B011549 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 7.2e-13 Identity = 43/65 (66.15%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of CSPI03G20750 vs. NCBI nr
Match: XP_008465647.1 (PREDICTED: uncharacterized protein LOC103503287, partial [Cucumis melo]) HSP 1 Score: 131.3 bits (329), Expect = 4.7e-27 Identity = 93/242 (38.43%), Postives = 98/242 (40.50%), Query Frame = 0
BLAST of CSPI03G20750 vs. NCBI nr
Match: XP_008449194.1 (PREDICTED: uncharacterized protein LOC103491145 [Cucumis melo]) HSP 1 Score: 123.2 bits (308), Expect = 1.3e-24 Identity = 73/136 (53.68%), Postives = 76/136 (55.88%), Query Frame = 0
BLAST of CSPI03G20750 vs. NCBI nr
Match: XP_011658426.2 (zinc finger MYM-type protein 1 [Cucumis sativus]) HSP 1 Score: 109.4 bits (272), Expect = 1.9e-20 Identity = 89/278 (32.01%), Postives = 95/278 (34.17%), Query Frame = 0
BLAST of CSPI03G20750 vs. NCBI nr
Match: XP_029148316.1 (uncharacterized protein LOC112742890 [Arachis hypogaea]) HSP 1 Score: 107.5 bits (267), Expect = 7.3e-20 Identity = 58/114 (50.88%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of CSPI03G20750 vs. NCBI nr
Match: XP_034198219.1 (uncharacterized protein LOC117613754, partial [Prunus dulcis]) HSP 1 Score: 106.7 bits (265), Expect = 1.3e-19 Identity = 57/110 (51.82%), Postives = 75/110 (68.18%), Query Frame = 0
BLAST of CSPI03G20750 vs. TAIR 10
Match: AT1G41920.1 (General transcription factor 2-related zinc finger protein ) HSP 1 Score: 60.5 bits (145), Expect = 9.6e-10 Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of CSPI03G20750 vs. TAIR 10
Match: AT3G29763.1 (General transcription factor 2-related zinc finger protein ) HSP 1 Score: 59.3 bits (142), Expect = 2.1e-09 Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0
HSP 2 Score: 52.8 bits (125), Expect = 2.0e-07 Identity = 24/65 (36.92%), Postives = 39/65 (60.00%), Query Frame = 0
BLAST of CSPI03G20750 vs. TAIR 10
Match: AT3G31402.2 (General transcription factor 2-related zinc finger protein ) HSP 1 Score: 58.5 bits (140), Expect = 3.6e-09 Identity = 35/93 (37.63%), Postives = 54/93 (58.06%), Query Frame = 0
BLAST of CSPI03G20750 vs. TAIR 10
Match: AT3G29450.1 (General transcription factor 2-related zinc finger protein ) HSP 1 Score: 57.8 bits (138), Expect = 6.2e-09 Identity = 25/65 (38.46%), Postives = 42/65 (64.62%), Query Frame = 0
BLAST of CSPI03G20750 vs. TAIR 10
Match: AT1G19260.1 (TTF-type zinc finger protein with HAT dimerisation domain ) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-08 Identity = 25/65 (38.46%), Postives = 41/65 (63.08%), Query Frame = 0
HSP 2 Score: 54.3 bits (129), Expect = 6.9e-08 Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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