CSPI03G20660 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G20660
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Reverse transcriptase
Location	Chr3: 16651913 .. 16653710 (+)
RNA-Seq Expression	CSPI03G20660
Synteny	CSPI03G20660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTGGTTGGCTAGTGATGATGGAGAAGATTAGGGTTGGGGTTTTCTTGGAGGGGTTTGTGAAGATGGTAGAGTGAAAGGTGAAACTAAAAAGTAATTTATATTTAATAAAATCTTCACGGACCATAAGAGCTTGAAATACTTCTTCACACAGAAGGAGTTAAATATGAGACAACATAGATGGCTCAAATTGGTCAAGGACTATGATTGTGAGATTTTATACCACCCAGGTAAGGCAAATGTGGTAGCTGATGCCCTTAGTAGTAAGGTATGACATTCTGCAGCGTCATTACTAGGCATGCTCATTTGCATAAAGACCTTGAGAGAGCTGAGATTGTAGTTTCAGTAGGAGAAGTTAACTCACAATTAGCTCATTTGTCGGTACATCCAACTTTGAGGTAGAGAATTATTATTGCTTAGTTTACTAATTCTTATTAGGTGGATAAGCGTTGCCTAGCAGAAGTAGGAAAGTTGAGAAGTTCTCTATATCCACTAATGAGGGACTCATGTTTGAGAAACGATTATGTGTGCCAGTAGATGTTAAGACCGAGTTATTGACTGAGGCCCATAGTTATCCATTTTCTATGCATCCAGGCAGTACAAAGATGTACCAGGACTTGAAGCAAGTTTACTGATGGAGAAATATGAAGAGAGAGGTGACAAACTTTGTCAGTAAGTGTCTGGTGTGCCAATAGGTGAAGGCACTAAGATAGAAACCAGCAGGTTTGTTACAACCTTTAAGTGTGCTATAGTGGAAGTGGAAGAATGTGTTTATGGACTTCATTTCAGGGCTGCCTTCTGAAGGGTTATACAAGGATATGGGTTATTGTGGATAAACTCACGAAGTCAGCACACTTCATCCCAGGGAACGCCACTTATACTGCCAGTAAGTGGGCACAGTTGTACATGACTAAGGTAGTGAGACTGCGTGGAGTGCCAGTATCCATAGTTTGCGACAAAGATGCCTGTTTTACTTCAAAGTTTTGAAAAGGACTTCAGGTTGCCATGGGCACGAGATTGGACTTCAATACATCTTTTCATTCTCAGACTGATGGTCAGACAGAGCGTTTGAATCAGATTCTGGAGGGTATGTTTCGAGCTTGTGTGTTGGAGTTCTCAGGGAGTTGGGACTCCCATTTGCACTTGATGAAGTTCGCCTACAATAATAGCTACCAGAATACTATTGACATGGCACCATTTGAAGTTCTGTATGGTAAGAGTTGTAGATCCCCTTTTTGTTGGGGTGAGGTTGGTGAGCAAAGGATGTTAGGCCCTGAACTAGTTTAGACCACCAGCGAAGCCATACAGAAGATTAGAGCTCACATGTTAACAGCACAGAGCAGACAGAAGAGTTATGCTAACGAGCGACGTAGGGATCTTGAGTTTGATGTAGGGGACATGGTCTTTCTGAGGGTAACACCTATGGAGGGTGTTCTAAGATTCGAGAAGAAGGGGAAGTTGAGTTCACATTTTGTAGGACCGTTCGAGATTCTTGAGAGGATTGGCCCAATAACTTATCGTTTGGCTTTGCCTCCGTCGTTATCTGCAGTTCATGACGTGTTCCATGTCTCCATGTTGAGAAAGTATGTAGCGGATCCTACACATATAGTTGATTATGAGCTATTGCAAATTAATAAGAACTTGAGCTATGAGGAGCAACCAGTTGAGATTTTAGCGAAGGAAGTCAAACTGATCTGTAACAGTGGAATTGCATTGGTTAAAGTTTTGTGGCGAAACCACGAGGTTGAAGAAGCTACTTTGGAGAGAGAGGACGACATGAGAGCTCATTATCTCTAG

mRNA sequence

ATGTGTGGTTGGCTAGTGATGATGGAGAAGATTAGGGTTGGGGTTTTCTTGGAGGGGTTTGTGAAGATGAAGGAGTTAAATATGAGACAACATAGATGGCTCAAATTGGTCAAGGACTATGATTGTGAGATTTTATACCACCCAGGTAAGGCAAATGTGGTAGCTGATGCCCTTAGTAGTAAGGGACTCATGTTTGAGAAACGATTATGTGTGCCAGTAGATGTTAAGACCGAGTTATTGACTGAGGCCCATAGTTATCCATTTTCTATGCATCCAGGCAGTACAAAGATGTACCAGGACTTGAAGCAAGGCTGCCTTCTGAAGGGTTATACAAGGATATGGGTTATTGTGGATAAACTCACGAAGTCAGCACACTTCATCCCAGGGAACGCCACTTATACTGCCAGTAAGTGGGCACAGTTGTACATGACTAAGGTAGTGAGACTGCGTGGAGTGCCAACTGATGGTCAGACAGAGCGTTTGAATCAGATTCTGGAGGGTATGTTTCGAGCTTGTGTGTTGGAGTTCTCAGGGAGTTGGGACTCCCATTTGCACTTGATGAAGTTCGCCTACAATAATAGCTACCAGAATACTATTGACATGGCACCATTTGAAGTTCTGTATGGTAAGAGTTGTAGATCCCCTTTTTGTTGGGGTGAGACCACCAGCGAAGCCATACAGAAGATTAGAGCTCACATGTTAACAGCACAGAGCAGACAGAAGAGTTATGCTAACGAGCGACGTAGGGATCTTGAGTTTGATGTAGGGGACATGGTCTTTCTGAGGGTAACACCTATGGAGGGTGTTCTAAGATTCGAGAAGAAGGGGAAGTTGAGTTCACATTTTGTAGGACCGTTCGAGATTCTTGAGAGGATTGGCCCAATAACTTATCGTTTGGCTTTGCCTCCGTCGTTATCTGCAGTTCATGACGTGTTCCATGTCTCCATGTTGAGAAAGTATGTAGCGGATCCTACACATATAGTTGATTATGAGCTATTGCAAATTAATAAGAACTTGAGCTATGAGGAGCAACCAGTTGAGATTTTAGCGAAGGAAGTCAAACTGATCTGTAACAGTGGAATTGCATTGGTTAAAGTTTTGTGGCGAAACCACGAGGTTGAAGAAGCTACTTTGGAGAGAGAGGACGACATGAGAGCTCATTATCTCTAG

Coding sequence (CDS)

ATGTGTGGTTGGCTAGTGATGATGGAGAAGATTAGGGTTGGGGTTTTCTTGGAGGGGTTTGTGAAGATGAAGGAGTTAAATATGAGACAACATAGATGGCTCAAATTGGTCAAGGACTATGATTGTGAGATTTTATACCACCCAGGTAAGGCAAATGTGGTAGCTGATGCCCTTAGTAGTAAGGGACTCATGTTTGAGAAACGATTATGTGTGCCAGTAGATGTTAAGACCGAGTTATTGACTGAGGCCCATAGTTATCCATTTTCTATGCATCCAGGCAGTACAAAGATGTACCAGGACTTGAAGCAAGGCTGCCTTCTGAAGGGTTATACAAGGATATGGGTTATTGTGGATAAACTCACGAAGTCAGCACACTTCATCCCAGGGAACGCCACTTATACTGCCAGTAAGTGGGCACAGTTGTACATGACTAAGGTAGTGAGACTGCGTGGAGTGCCAACTGATGGTCAGACAGAGCGTTTGAATCAGATTCTGGAGGGTATGTTTCGAGCTTGTGTGTTGGAGTTCTCAGGGAGTTGGGACTCCCATTTGCACTTGATGAAGTTCGCCTACAATAATAGCTACCAGAATACTATTGACATGGCACCATTTGAAGTTCTGTATGGTAAGAGTTGTAGATCCCCTTTTTGTTGGGGTGAGACCACCAGCGAAGCCATACAGAAGATTAGAGCTCACATGTTAACAGCACAGAGCAGACAGAAGAGTTATGCTAACGAGCGACGTAGGGATCTTGAGTTTGATGTAGGGGACATGGTCTTTCTGAGGGTAACACCTATGGAGGGTGTTCTAAGATTCGAGAAGAAGGGGAAGTTGAGTTCACATTTTGTAGGACCGTTCGAGATTCTTGAGAGGATTGGCCCAATAACTTATCGTTTGGCTTTGCCTCCGTCGTTATCTGCAGTTCATGACGTGTTCCATGTCTCCATGTTGAGAAAGTATGTAGCGGATCCTACACATATAGTTGATTATGAGCTATTGCAAATTAATAAGAACTTGAGCTATGAGGAGCAACCAGTTGAGATTTTAGCGAAGGAAGTCAAACTGATCTGTAACAGTGGAATTGCATTGGTTAAAGTTTTGTGGCGAAACCACGAGGTTGAAGAAGCTACTTTGGAGAGAGAGGACGACATGAGAGCTCATTATCTCTAG

Protein sequence

MCGWLVMMEKIRVGVFLEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSKGLMFEKRLCVPVDVKTELLTEAHSYPFSMHPGSTKMYQDLKQGCLLKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVPTDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGETTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSMLRKYVADPTHIVDYELLQINKNLSYEEQPVEILAKEVKLICNSGIALVKVLWRNHEVEEATLEREDDMRAHYL*

Homology

[Close]

BLAST of CSPI03G20660 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-22
Identity = 74/261 (28.35%), Postives = 119/261 (45.59%), Query Frame = 0


Query: 109  GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP--------------- 168
            GY  ++V+VD+ +K A  +P   + TA + A+++  +V+   G P               
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 169  ---------------------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYN 228
                                 TDGQTER NQ +E + R        +W  H+ L++ +YN
Sbjct: 1060 WKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYN 1119

Query: 229  NSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQK 288
            N+  +   M PFE+++  S   SP              + T +  Q ++ H+ T   + K
Sbjct: 1120 NAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1179

Query: 289  SYANERRRDL-EFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLA 321
             Y + + +++ EF  GD+V ++ T   G L   K  KL+  F GPF +L++ GP  Y L 
Sbjct: 1180 KYFDMKIQEIEEFQPGDLVMVKRT-KTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELD 1239

[Close]

BLAST of CSPI03G20660 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-22
Identity = 74/261 (28.35%), Postives = 119/261 (45.59%), Query Frame = 0


Query: 109  GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP--------------- 168
            GY  ++V+VD+ +K A  +P   + TA + A+++  +V+   G P               
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 169  ---------------------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYN 228
                                 TDGQTER NQ +E + R        +W  H+ L++ +YN
Sbjct: 1060 WKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYN 1119

Query: 229  NSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQK 288
            N+  +   M PFE+++  S   SP              + T +  Q ++ H+ T   + K
Sbjct: 1120 NAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1179

Query: 289  SYANERRRDL-EFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLA 321
             Y + + +++ EF  GD+V ++ T   G L   K  KL+  F GPF +L++ GP  Y L 
Sbjct: 1180 KYFDMKIQEIEEFQPGDLVMVKRT-KTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELD 1239

[Close]

BLAST of CSPI03G20660 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-22
Identity = 74/261 (28.35%), Postives = 119/261 (45.59%), Query Frame = 0


Query: 109  GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP--------------- 168
            GY  ++V+VD+ +K A  +P   + TA + A+++  +V+   G P               
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 169  ---------------------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYN 228
                                 TDGQTER NQ +E + R        +W  H+ L++ +YN
Sbjct: 1060 WKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYN 1119

Query: 229  NSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQK 288
            N+  +   M PFE+++  S   SP              + T +  Q ++ H+ T   + K
Sbjct: 1120 NAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1179

Query: 289  SYANERRRDL-EFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLA 321
             Y + + +++ EF  GD+V ++ T   G L   K  KL+  F GPF +L++ GP  Y L 
Sbjct: 1180 KYFDMKIQEIEEFQPGDLVMVKRT-KTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELD 1239

[Close]

BLAST of CSPI03G20660 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-22
Identity = 74/261 (28.35%), Postives = 119/261 (45.59%), Query Frame = 0


Query: 109  GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP--------------- 168
            GY  ++V+VD+ +K A  +P   + TA + A+++  +V+   G P               
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 169  ---------------------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYN 228
                                 TDGQTER NQ +E + R        +W  H+ L++ +YN
Sbjct: 1060 WKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYN 1119

Query: 229  NSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQK 288
            N+  +   M PFE+++  S   SP              + T +  Q ++ H+ T   + K
Sbjct: 1120 NAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1179

Query: 289  SYANERRRDL-EFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLA 321
             Y + + +++ EF  GD+V ++ T   G L   K  KL+  F GPF +L++ GP  Y L 
Sbjct: 1180 KYFDMKIQEIEEFQPGDLVMVKRT-KTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELD 1239

[Close]

BLAST of CSPI03G20660 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.2e-22
Identity = 74/261 (28.35%), Postives = 119/261 (45.59%), Query Frame = 0


Query: 109  GYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP--------------- 168
            GY  ++V+VD+ +K A  +P   + TA + A+++  +V+   G P               
Sbjct: 1000 GYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQT 1059

Query: 169  ---------------------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYN 228
                                 TDGQTER NQ +E + R        +W  H+ L++ +YN
Sbjct: 1060 WKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYN 1119

Query: 229  NSYQNTIDMAPFEVLYGKS-CRSPFCW----------GETTSEAIQKIRAHMLTAQSRQK 288
            N+  +   M PFE+++  S   SP              + T +  Q ++ H+ T   + K
Sbjct: 1120 NAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQVFQTVKEHLNTNNIKMK 1179

Query: 289  SYANERRRDL-EFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLA 321
             Y + + +++ EF  GD+V ++ T   G L   K  KL+  F GPF +L++ GP  Y L 
Sbjct: 1180 KYFDMKIQEIEEFQPGDLVMVKRT-KTGFL--HKSNKLAPSFAGPFYVLQKSGPNNYELD 1239

[Close]

BLAST of CSPI03G20660 vs. ExPASy TrEMBL
Match: A0A5A7TY28 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G00240 PE=4 SV=1)

HSP 1 Score: 543.1 bits (1398), Expect = 9.4e-151
Identity = 299/526 (56.84%), Postives = 331/526 (62.93%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K               
Sbjct: 923  LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLL 982

Query: 77   --------------------------------GLMFEKRLCVPVD--VKTELLTEAHSYP 136
                                            GLMFE RLCVP D  VKTELLTEAHS P
Sbjct: 983  RDFERAEIVVSVEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSP 1042

Query: 137  FSMHPGSTKMYQDLK----------------QGCL------------------------- 196
            F+MHPGSTKMYQDL+                  CL                         
Sbjct: 1043 FTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK 1102

Query: 197  ---------------LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRG 256
                           LKGYT IWV+VD+LTKSAHF+PG +TYTASKW QLYMTK+VRL G
Sbjct: 1103 WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHG 1162

Query: 257  VP------------------------------------TDGQTERLNQILEGMFRACVLE 316
            VP                                    TDGQTERLNQILE M RACVLE
Sbjct: 1163 VPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLE 1222

Query: 317  FSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TT 376
            FSGSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CWGE             TT
Sbjct: 1223 FSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTT 1282

Query: 377  SEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHF 389
            + AIQKIRA MLTAQSRQKSYA+ RR+DLEF+VGDMV L+V PM+GVLRF KKGKLS  F
Sbjct: 1283 NAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRF 1342

[Close]

BLAST of CSPI03G20660 vs. ExPASy TrEMBL
Match: A0A5A7UDB1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00190 PE=4 SV=1)

HSP 1 Score: 540.4 bits (1391), Expect = 6.1e-150
Identity = 294/524 (56.11%), Postives = 331/524 (63.17%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K               
Sbjct: 933  LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQRII 992

Query: 77   ------------------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFS 136
                                          GL+FE+RLCVP D  VKTELL+EAHS PFS
Sbjct: 993  DAQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAHSSPFS 1052

Query: 137  MHPGSTKMYQDLKQ----------------GCL--------------------------- 196
            MHPGSTKMYQDLK+                 CL                           
Sbjct: 1053 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1112

Query: 197  -------------LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP 256
                         LKG+T IWV+VD+LTKSAHF+PG +TYTASKWAQLYM+++VRL GVP
Sbjct: 1113 NVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVP 1172

Query: 257  ------------------------------------TDGQTERLNQILEGMFRACVLEFS 316
                                                TDGQTERLNQ+LE M RAC LEF 
Sbjct: 1173 VSIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1232

Query: 317  GSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSE 376
            GSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CW E             +T+E
Sbjct: 1233 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNE 1292

Query: 377  AIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVG 389
            AIQKI++ M TAQSRQKSYA+ RR+DLEF+VGD VFL+V PM GVLRFE++GKLSSHFVG
Sbjct: 1293 AIQKIKSRMRTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSSHFVG 1352

[Close]

BLAST of CSPI03G20660 vs. ExPASy TrEMBL
Match: A0A5D3BQD5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold113G001680 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 3.9e-149
Identity = 286/492 (58.13%), Postives = 327/492 (66.46%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKAN+VADALS K               
Sbjct: 815  LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANMVADALSRKLAQLTVQRTLRQKII 874

Query: 77   ------------------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFS 136
                                          GL+FE+RLCVP D  +KTELL+EAHS PF 
Sbjct: 875  DAQSNDPYLVEKRDLAEAEQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFF 934

Query: 137  MHPGSTKMYQDLKQ----------------GCLLKGYTR--------IWVIVDKLTKSAH 196
            MHPGSTKMYQDLK+                 CL+    +        IWV+VD LTKSAH
Sbjct: 935  MHPGSTKMYQDLKRVYWWRNMKREVAELVSKCLVCQQVKAPRQKPAVIWVVVDMLTKSAH 994

Query: 197  FIPGNATYTASKWAQLYMTKVVRLRGVP-------------------------------- 256
            F+ G +TYTASKWAQLYM+++VRL GVP                                
Sbjct: 995  FVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGMRLDFSTA 1054

Query: 257  ----TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYG 316
                TDGQTERLNQ+LE M RAC LEF GSWDSHLHLM+FAYNNS+Q TIDMAPFE LYG
Sbjct: 1055 FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIDMAPFEALYG 1114

Query: 317  KSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVG 376
            K CRSP CWGE             +T+ AIQKIR+ MLTAQSRQKSY + RR+DLEFDVG
Sbjct: 1115 KCCRSPVCWGEVGEQRLMGSELVRSTNNAIQKIRSRMLTAQSRQKSYVDVRRKDLEFDVG 1174

Query: 377  DMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSM 389
            D VFL+V PM+GVLRFE++GKLS  FVGP EILERIGP+TYRLALPPSLSAVHDVFHVSM
Sbjct: 1175 DKVFLKVAPMKGVLRFERRGKLSPRFVGPLEILERIGPVTYRLALPPSLSAVHDVFHVSM 1234

[Close]

BLAST of CSPI03G20660 vs. ExPASy TrEMBL
Match: A0A5A7TP01 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1484G00070 PE=4 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 5.2e-149
Identity = 302/557 (54.22%), Postives = 333/557 (59.78%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K               
Sbjct: 975  LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLL 1034

Query: 77   ------------------------------------------------------------ 136
                                                                        
Sbjct: 1035 RDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSIS 1094

Query: 137  ---GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK-------------- 196
               GLMFE RLCVP D  VKTELLTEAHS PF+MHPGSTKMYQDL+              
Sbjct: 1095 SDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAE 1154

Query: 197  --QGCL----------------------------------------LKGYTRIWVIVDKL 256
                CL                                        LKGYT IWV+VD+L
Sbjct: 1155 FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL 1214

Query: 257  TKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP--------------------------- 316
            TK+AHF+PG +TYTASKW QLYMT++VRL GVP                           
Sbjct: 1215 TKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRL 1274

Query: 317  ---------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPF 376
                     TDGQTERLNQILE M RACVLEFSGSWDSHLHLM+FAYNNSYQ TI MAPF
Sbjct: 1275 DFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF 1334

Query: 377  EVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDL 389
            E LYGK CRSP CWGE             TT+ AIQKIRA MLTAQSRQKSYA+ RR+DL
Sbjct: 1335 EALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL 1394

[Close]

BLAST of CSPI03G20660 vs. ExPASy TrEMBL
Match: A0A5D3D6H0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00910 PE=4 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 2.0e-148
Identity = 297/532 (55.83%), Postives = 329/532 (61.84%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKANVV DALS K               
Sbjct: 782  LKYFFTKKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAHSAALITKQAPLL 841

Query: 77   ------------------------------------------------------------ 136
                                                                        
Sbjct: 842  RDFERAEIAVSVGEVTSQLAKLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSIS 901

Query: 137  ---GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ------------- 196
               GLMFE RLCVP D  VKTELLTEAHS PF+MHPGSTKMYQ+L+              
Sbjct: 902  SDNGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVAD 961

Query: 197  -----------------GCLLKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKV 256
                                +KGYT IWV+VD+LTKSAHF+PG +TYTASKW QLYMT++
Sbjct: 962  FVRWKWESVSMDFITGLPKTVKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWEQLYMTEI 1021

Query: 257  VRLRGVP------------------------------------TDGQTERLNQILEGMFR 316
            VRL GVP                                    TDGQTERLNQILE M R
Sbjct: 1022 VRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLR 1081

Query: 317  ACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE---------- 376
            ACVLEFSGSWDSHLHLM+FAYNNSY+ TI MAPFE LYGK CRSP CWGE          
Sbjct: 1082 ACVLEFSGSWDSHLHLMEFAYNNSYETTIGMAPFEALYGKCCRSPVCWGEVREQRMLGLE 1141

Query: 377  ---TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGK 390
               TT+ AIQKI+A MLTA SRQKSYA+ RR+DLEF+V DMVFL+V PM+GVLRFEKKGK
Sbjct: 1142 LVPTTNAAIQKIQARMLTAWSRQKSYADVRRKDLEFEVRDMVFLKVAPMKGVLRFEKKGK 1201

[Close]

BLAST of CSPI03G20660 vs. NCBI nr
Match: KAA0048442.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 543.1 bits (1398), Expect = 1.9e-150
Identity = 299/526 (56.84%), Postives = 331/526 (62.93%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K               
Sbjct: 923  LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLL 982

Query: 77   --------------------------------GLMFEKRLCVPVD--VKTELLTEAHSYP 136
                                            GLMFE RLCVP D  VKTELLTEAHS P
Sbjct: 983  RDFERAEIVVSVEKRRMVETEQGEDFSISSDDGLMFEGRLCVPEDSAVKTELLTEAHSSP 1042

Query: 137  FSMHPGSTKMYQDLK----------------QGCL------------------------- 196
            F+MHPGSTKMYQDL+                  CL                         
Sbjct: 1043 FTMHPGSTKMYQDLRSVYWWRGMKRDVADFVSRCLVCQQVKAPRQHPAGLLQPLSVPGWK 1102

Query: 197  ---------------LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRG 256
                           LKGYT IWV+VD+LTKSAHF+PG +TYTASKW QLYMTK+VRL G
Sbjct: 1103 WESVSMDFITGLPKTLKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWGQLYMTKIVRLHG 1162

Query: 257  VP------------------------------------TDGQTERLNQILEGMFRACVLE 316
            VP                                    TDGQTERLNQILE M RACVLE
Sbjct: 1163 VPVSIISDRDARFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLRACVLE 1222

Query: 317  FSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TT 376
            FSGSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CWGE             TT
Sbjct: 1223 FSGSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWGEVGEQRMLGPELVQTT 1282

Query: 377  SEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHF 389
            + AIQKIRA MLTAQSRQKSYA+ RR+DLEF+VGDMV L+V PM+GVLRF KKGKLS  F
Sbjct: 1283 NAAIQKIRARMLTAQSRQKSYADVRRKDLEFEVGDMVLLKVAPMKGVLRFAKKGKLSPRF 1342

[Close]

BLAST of CSPI03G20660 vs. NCBI nr
Match: KAA0053234.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 540.4 bits (1391), Expect = 1.3e-149
Identity = 294/524 (56.11%), Postives = 331/524 (63.17%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K               
Sbjct: 933  LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKLAQLTVQPTLRQRII 992

Query: 77   ------------------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFS 136
                                          GL+FE+RLCVP D  VKTELL+EAHS PFS
Sbjct: 993  DAQSNDPYLVEKRGLAETRQAVEFSLSSDGGLLFERRLCVPSDRAVKTELLSEAHSSPFS 1052

Query: 137  MHPGSTKMYQDLKQ----------------GCL--------------------------- 196
            MHPGSTKMYQDLK+                 CL                           
Sbjct: 1053 MHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWE 1112

Query: 197  -------------LKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP 256
                         LKG+T IWV+VD+LTKSAHF+PG +TYTASKWAQLYM+++VRL GVP
Sbjct: 1113 NVSMDFITGLPRTLKGFTVIWVVVDRLTKSAHFLPGKSTYTASKWAQLYMSEIVRLHGVP 1172

Query: 257  ------------------------------------TDGQTERLNQILEGMFRACVLEFS 316
                                                TDGQTERLNQ+LE M RAC LEF 
Sbjct: 1173 VSIVSDRDARSTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1232

Query: 317  GSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE-------------TTSE 376
            GSWDSHLHLM+FAYNNSYQ TI MAPFE LYGK CRSP CW E             +T+E
Sbjct: 1233 GSWDSHLHLMEFAYNNSYQATIGMAPFEALYGKCCRSPVCWDEVGEQRLMGPELVQSTNE 1292

Query: 377  AIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGKLSSHFVG 389
            AIQKI++ M TAQSRQKSYA+ RR+DLEF+VGD VFL+V PM GVLRFE++GKLSSHFVG
Sbjct: 1293 AIQKIKSRMRTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMRGVLRFERRGKLSSHFVG 1352

[Close]

BLAST of CSPI03G20660 vs. NCBI nr
Match: TYK01903.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 537.7 bits (1384), Expect = 8.2e-149
Identity = 286/492 (58.13%), Postives = 327/492 (66.46%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKAN+VADALS K               
Sbjct: 815  LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANMVADALSRKLAQLTVQRTLRQKII 874

Query: 77   ------------------------------GLMFEKRLCVPVD--VKTELLTEAHSYPFS 136
                                          GL+FE+RLCVP D  +KTELL+EAHS PF 
Sbjct: 875  DAQSNDPYLVEKRDLAEAEQAVEFSISSDGGLLFERRLCVPSDSAIKTELLSEAHSSPFF 934

Query: 137  MHPGSTKMYQDLKQ----------------GCLLKGYTR--------IWVIVDKLTKSAH 196
            MHPGSTKMYQDLK+                 CL+    +        IWV+VD LTKSAH
Sbjct: 935  MHPGSTKMYQDLKRVYWWRNMKREVAELVSKCLVCQQVKAPRQKPAVIWVVVDMLTKSAH 994

Query: 197  FIPGNATYTASKWAQLYMTKVVRLRGVP-------------------------------- 256
            F+ G +TYTASKWAQLYM+++VRL GVP                                
Sbjct: 995  FVSGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTFKFWKGLQTAMGMRLDFSTA 1054

Query: 257  ----TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYG 316
                TDGQTERLNQ+LE M RAC LEF GSWDSHLHLM+FAYNNS+Q TIDMAPFE LYG
Sbjct: 1055 FHPQTDGQTERLNQVLEDMLRACALEFPGSWDSHLHLMEFAYNNSFQATIDMAPFEALYG 1114

Query: 317  KSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVG 376
            K CRSP CWGE             +T+ AIQKIR+ MLTAQSRQKSY + RR+DLEFDVG
Sbjct: 1115 KCCRSPVCWGEVGEQRLMGSELVRSTNNAIQKIRSRMLTAQSRQKSYVDVRRKDLEFDVG 1174

Query: 377  DMVFLRVTPMEGVLRFEKKGKLSSHFVGPFEILERIGPITYRLALPPSLSAVHDVFHVSM 389
            D VFL+V PM+GVLRFE++GKLS  FVGP EILERIGP+TYRLALPPSLSAVHDVFHVSM
Sbjct: 1175 DKVFLKVAPMKGVLRFERRGKLSPRFVGPLEILERIGPVTYRLALPPSLSAVHDVFHVSM 1234

[Close]

BLAST of CSPI03G20660 vs. NCBI nr
Match: KAA0025917.1 (pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo var. makuwa] >KAA0048622.1 pol protein [Cucumis melo var. makuwa] >KAA0056306.1 pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 537.3 bits (1383), Expect = 1.1e-148
Identity = 302/557 (54.22%), Postives = 333/557 (59.78%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKANVVADALS K               
Sbjct: 975  LKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVAHSAALITKQTPLL 1034

Query: 77   ------------------------------------------------------------ 136
                                                                        
Sbjct: 1035 RDLERAEIAVSVGEVAAQLAQLTVQPTLRQKIIAAQLSDPYLAEKRRMVETEQGEEFSIS 1094

Query: 137  ---GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLK-------------- 196
               GLMFE RLCVP D  VKTELLTEAHS PF+MHPGSTKMYQDL+              
Sbjct: 1095 SDDGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQDLRSVYWWRGMKRDVAE 1154

Query: 197  --QGCL----------------------------------------LKGYTRIWVIVDKL 256
                CL                                        LKGYT IWV+VD+L
Sbjct: 1155 FVSRCLVCQQVKAPRQHPAGLLQPLSVPGWKWESVSMDFITGLPKTLKGYTVIWVVVDRL 1214

Query: 257  TKSAHFIPGNATYTASKWAQLYMTKVVRLRGVP--------------------------- 316
            TK+AHF+PG +TYTASKW QLYMT++VRL GVP                           
Sbjct: 1215 TKTAHFVPGKSTYTASKWGQLYMTEIVRLHGVPVSIVSDRDARFTSKFWQGLQLALGTRL 1274

Query: 317  ---------TDGQTERLNQILEGMFRACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPF 376
                     TDGQTERLNQILE M RACVLEFSGSWDSHLHLM+FAYNNSYQ TI MAPF
Sbjct: 1275 DFSTAFHPQTDGQTERLNQILEDMLRACVLEFSGSWDSHLHLMEFAYNNSYQATIGMAPF 1334

Query: 377  EVLYGKSCRSPFCWGE-------------TTSEAIQKIRAHMLTAQSRQKSYANERRRDL 389
            E LYGK CRSP CWGE             TT+ AIQKIRA MLTAQSRQKSYA+ RR+DL
Sbjct: 1335 EALYGKCCRSPVCWGEVGEQRMLGPELVQTTNAAIQKIRARMLTAQSRQKSYADVRRKDL 1394

[Close]

BLAST of CSPI03G20660 vs. NCBI nr
Match: TYK19164.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 535.4 bits (1378), Expect = 4.0e-148
Identity = 297/532 (55.83%), Postives = 329/532 (61.84%), Query Frame = 0


Query: 17   LEGFVKMKELNMRQHRWLKLVKDYDCEILYHPGKANVVADALSSK--------------- 76
            L+ F   KELNMRQ RWL+LVKDYDCEILYHPGKANVV DALS K               
Sbjct: 782  LKYFFTKKELNMRQRRWLELVKDYDCEILYHPGKANVVVDALSRKVAHSAALITKQAPLL 841

Query: 77   ------------------------------------------------------------ 136
                                                                        
Sbjct: 842  RDFERAEIAVSVGEVTSQLAKLSVQPTLRQRIIVAQLNDPYLVEKRRLVETGQGEDFSIS 901

Query: 137  ---GLMFEKRLCVPVD--VKTELLTEAHSYPFSMHPGSTKMYQDLKQ------------- 196
               GLMFE RLCVP D  VKTELLTEAHS PF+MHPGSTKMYQ+L+              
Sbjct: 902  SDNGLMFEGRLCVPEDSAVKTELLTEAHSSPFTMHPGSTKMYQNLRSVYWWRNMKREVAD 961

Query: 197  -----------------GCLLKGYTRIWVIVDKLTKSAHFIPGNATYTASKWAQLYMTKV 256
                                +KGYT IWV+VD+LTKSAHF+PG +TYTASKW QLYMT++
Sbjct: 962  FVRWKWESVSMDFITGLPKTVKGYTVIWVVVDRLTKSAHFVPGKSTYTASKWEQLYMTEI 1021

Query: 257  VRLRGVP------------------------------------TDGQTERLNQILEGMFR 316
            VRL GVP                                    TDGQTERLNQILE M R
Sbjct: 1022 VRLHGVPVSIISDRDTRFTSKFWKGLQLALGTRLDFSTAFHPQTDGQTERLNQILEDMLR 1081

Query: 317  ACVLEFSGSWDSHLHLMKFAYNNSYQNTIDMAPFEVLYGKSCRSPFCWGE---------- 376
            ACVLEFSGSWDSHLHLM+FAYNNSY+ TI MAPFE LYGK CRSP CWGE          
Sbjct: 1082 ACVLEFSGSWDSHLHLMEFAYNNSYETTIGMAPFEALYGKCCRSPVCWGEVREQRMLGLE 1141

Query: 377  ---TTSEAIQKIRAHMLTAQSRQKSYANERRRDLEFDVGDMVFLRVTPMEGVLRFEKKGK 390
               TT+ AIQKI+A MLTA SRQKSYA+ RR+DLEF+V DMVFL+V PM+GVLRFEKKGK
Sbjct: 1142 LVPTTNAAIQKIQARMLTAWSRQKSYADVRRKDLEFEVRDMVFLKVAPMKGVLRFEKKGK 1201

The following BLAST results are available for this feature:

BLAST of CSPI03G20660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	1.2e-22	28.35	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.2e-22	28.35	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.2e-22	28.35	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.2e-22	28.35	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.2e-22	28.35	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CSPI03G20660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TY28	9.4e-151	56.84	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61...	[more]
A0A5A7UDB1	6.1e-150	56.11	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold10...	[more]
A0A5D3BQD5	3.9e-149	58.13	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7TP01	5.2e-149	54.22	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold14...	[more]
A0A5D3D6H0	2.0e-148	55.83	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00910 PE...	[more]

BLAST of CSPI03G20660 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048442.1	1.9e-150	56.84	pol protein [Cucumis melo var. makuwa]	[more]
KAA0053234.1	1.3e-149	56.11	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
TYK01903.1	8.2e-149	58.13	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0025917.1	1.1e-148	54.22	pol protein [Cucumis melo var. makuwa] >KAA0042949.1 pol protein [Cucumis melo v...	[more]
TYK19164.1	4.0e-148	55.83	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of CSPI03G20660 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 153..246 e-value: 7.1E-14 score: 53.5
None	No IPR available	GENE3D	1.10.340.70		coord: 45..114 e-value: 1.2E-5 score: 27.4
None	No IPR available	PANTHER	PTHR46148	FAMILY NOT NAMED	coord: 166..388
None	No IPR available	PANTHER	PTHR46148:SF18	IPP TRANSFERASE	coord: 166..388
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 107..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G20660.1	CSPI03G20660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090304	nucleic acid metabolic process
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity