CSPI03G20170 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI03G20170
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Descriptionprotein root UVB sensitive 1, chloroplastic isoform X1
LocationChr3: 15962645 .. 15968195 (-)
RNA-Seq ExpressionCSPI03G20170
SyntenyCSPI03G20170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGTTGAGCTTACTATCTGCCGAAGCGAAGGAATCAGCAGCAAATATTGAAAAGCGACTGCAATTGGGTTCAAAGCTCAGTGATGTGGCCACTTGTGAGGAGGATGTTCTTGAACTCTTAAGTCTGTTCAATAAAGAAAATTATATTCTATCAGAGCACAGGGGAAAATATTGTGTAAGTAAAATCTAAACCCATTTCATTTTAGACCTGAATAAAACTTTTCTTTGGGAAAGGCACAAAGTTGATGGAATTATTTTTCCTGCTCAATTAAATTTGCATTTGGGTTAAATTAATTTTGTTTCTTCTGATTCATTTACTAAACTGTATTTCCACTGTGTGTATTGTTTTGGATTAAGAAGCTTTCTTCTCTTAGTCCAATAGTACTTGATATGAAGCTTTACGCCCTTGTTACCCATGGATTATTAGTTTATGATTTTAGAGAATATTGCAAAAATCATCCATAAAGCAAAAAGATGGGATAGTAAAAAAAACCTCTATACACCCCCTTTTCCATTCACCATCTTTAACCATGTTTTGATGCAAGGCCTCACCAACTCCTGTCACAGAAAGGACGCACAAGAGCACACCCAAGTAATAGGGGAAATATATCTATTGAATTTCATCACAAAAATACATCAATAACCTTAGCCTAATAAGAGGGCTTTACTCTCCACAATGAACTATTGTTCATCCACATAAAATACACATAAACCTAGATAACTAACCCTAGCACAAAACACCCAATATAGACTAACATCGTTCATCCACATAAAACACACATAAACCTTGATAACTAACCCTAGCACAAAACACCCAAATATATACTAACATTTCCTAAGAACATAGGACCACAACAACTACCCTTTTGTCGGGGTGAAAACCCCTTCCTACCCCTCCTCCTATATACTTGCTTAATAGGTGGCCTTGCAATACCCTAATGGAGAAGAGTTACCTTATCCTCAAGGTGAAAATTAGGGAACTGGGCCTTAAGGACAGCGTACGATTCCCAACTTTGGACGGGAAGGATCAGACTCACAACAATAAGGGCGATAGAGTGGCCATGGTGGAGAACATGGTGAGGCATTTGGCTATCACCAAGGACACCATAACAACTGGTCACACATCCATCCATCTCCACAGCCGCAAGCCTACGCTGTTGCTGCTTCTTCATCGTCATCATCAATGGAAAACCTTCTCTGCGAGTACATGCAAAAGAATGATGCCCTTTTGTAGAGTCGGGCTGCTACCATCCGCAATCTGAGTTACAGATGGAGCAAATTGCCAGTGACATCTTCGAAAGACTAAGGGGATCCCTCCCTAACAGTACTGAAACGCCAAACCAAGTGGGGGATCGAAAAAGGATCAGTGTCAATCTGTGATGCTAAGAAACGCAAGGAACTTAACCATCCGCGAACTAGACCAAGAATAGTCAGTCTACTTCTTTGCCTAATACCACGAATGACCATTCACACAGTACTGACACTTCTCCTATTGTTTTTTCTTCAACTAATGATCTTTCTTCTTTGTAGAATGACAGTACTGAAAAACAAGAAAGTTGAGACTACCAGAGAAGATCTAAAATGCAGGCAGACGTCTAATTAGGCGTCATCATCTAATCTGTTGCCTCTCTTTTGACCCAGCATAGCCTTACTGCCACATCACTTGCGTTGCACTTCAGTTTGAAAGGTTGCGACCAATCAGGTGTGATGAGGATAAGCATTGAGGTCAATGCGTCTTTCAAAGTTTGGAACACCTAGTTGCATTTCTCATCAAACATATAGGGTTGGTTGGCGCTTAATAGGTTGCTCAATGGCTTAGCGAGCTGAGAGAAACCTCAAGTGAATCTTTTGTAAAAGCCAGCATGTCCCAAAAAGCTTCGTAAACATTTGATATCAGAAGGCGTTGGAAACTTGCTCACCACATTAATCTTCGCATGGTCTACTTCTAAGCCTGCTTGGAGAGCTTGTGCCCTAGCAAAATCCCCTCGATTATCATTAAATTACACTTTTCCTTGTTGTGTATTAAGCATGTCTTCTTCCATCTCTTCAATACCTCTTCCAAGTTGTTCAGACATTCGATATATGATTTCCAAAGATTGAGAAGTCATTCATAAAAATTTCTACTGATCTGTTTAAAAAGTCCGAAAATATTGCCATCATGCACCTTTAAAATGTCCATGGCAGATTACACAATCCAAAAGGCATGTGATGAAAAGCAAACGTGCCGCAAGGACAAGTAAATGTGGTTTTGTGCTAATCTTTGGGTGCAATAGTTATCTGATTATACCCATAATAGCCATTCAGAAAGCAATAATACTTGTTGCCTGCAAGTTGGTCCAGCATATGATCAATAAAAGACGAGGGAAAGTGGTTCTTCTTTGTTGCCACATTCAGCTTGTGGTAATCCGCCACCCAGTCACTGTTCTTGTTGGGATTAATTCATTATTCCATCGTTGCGGTCTTTAATTGATAATTTGTTGGTCGGTTGAGTAGCTTAGAAGTCATCTGTTTCTTCCATTATATTCTTTGTTGCTTTTTTTTTTCCTTGTTAATTTTATTTGAAATCTTAACATAAAATTTACAAGTTAAAGATAGAGCTATTCAACTAATCAATAGGGAATTAGTTTCATAATTTACTTGATTTCAAGATGCAATTGAATTAAATAATAATAACAATAACAAAAAATTAATAATCTTCCAATTATGTGTGGTAAGGATTCTTTGAATAACTTAATTTTTTTTATTTGCAACTGCCCAAACTAATGATAAAAAGAAGATTCTGTCTGATGAAGTCAATTTGCTAGATTAGTCAACATAGCGTTGGGTGGTTTAACAAACCAAAAACAAAATTTGATGAAAGATCCTCTTAAATAGAATTATTTGATGACGTAGACTGTGTAGTTTATAAGCATATGTTAAAAATTCCATTAAATCTTATCAATTATTTTACAAAGATAAATTGTTACATATGAAAGTGAATTGTCACAAAATATGAAGGTATGTGACCAAATGGTTGCAAATCAAAGTTCATGTTTCCATCAAAGCTCATTGACCTCAAAAAGTGATGTTTAAGCCAAACTATTATCACCAAAAGAAAGAAAAAAAAAGCTAGTTCATGGCAGAGTTACTAAACAGTCCATGCCAGAGATCCAAATCCCCAAAATAAAAGGTAGAGGGGTTATCTTCATTTCATTTGAAAGAAACACATCTAAGGCTAGAAAATCATTCTATTTGAAGTGACCAAGTATTATTTGCTAAGAGTATCACTATATAAACTCAAATCATGCTGGGAATGTTATTTTATTGTGCAGGTAATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAGGACGAGTTACTATACTACAAATTAAAGTACAAAGCTAGCCAGGACATTTCTAACAACACTGGATTTTTTAGAGATGGGTATGAAATTCATCATTTTAAAAAATTGGAACAATGAAAATATTTCAGTAGCAGTAGTAAGCTAAAAGATTATTAGTTATTGATCTGTTAGTAAAATTGTTATTATTTCAACTGTTTGTTTCTTCTTCTCACATGTATATATATTGATTGGGCATATCCCAATATAGTGAGTCATTTTTAGTTGTTTCTCTTCTAATATGGTATCAGGTGTTTAGCTTTCTACCAAACTAATCGTCCTTCAACCTTCCGACTTCGACTACAAAAATTGCCATGACTGTCGATAATCTTCAACTTGAAGCTCTAGTTCCTCTAGTTCTTCCCATGAATTCCTCAAAGACACAGAAAATGTTCATAATTCCTTTGAGACTTCTTGATCAAAGTCAAGGACACCTTAATCCTTACTATCTACAACACAATGATAACACAAGTTTGGTATTAGTTACTATGCCGTTAACTGAGGAGAACTATGTTTCTTGGAGTCGTTGGATGATGATTTGACTATATGTAGATACTCAGTTTTATGGATGGAACTCTTCCTTGTCTGAGTGATGACCTTCCTTCATGGATCAAGAATAACATTGTCATATTTTGAATCTTGAACTTAGTTTCCAAGCTTATTTTAGCTTCTTCTTTTTTTTCTTTTTTTTTCTGTTTTCTTTTTCTTTTTTTGGTTGATTTGGCAAGAAGCATTTGGTTGGATCTCAAGGAATGTTTTGAACAAAAGAATGCTCCAAGAATCTTCCAATTGAAGACATCTTTTGCAACATTAGCTTAAAATCAAGATTATGTGAGCATATGTTTTACGAGGTTAAAATCTTTATTAATGAGTTAAATTCATATCGGTCTCTTGTCCTTGTGGATGTTATCCTGGGACTCAATGAATCCTTTACTCAAGCTCGAGTTCAATTACTTTTAAATGGAGCCAATTCCTTCTATCAACTGGGCATTTTCTCTTCTTTAAGAAGAACAACAACGAGCAATAGGATCATTCTCTTTAGTCTCACCAGTTGTTTCTCTGTTGTCACTTCTAATTCTTCTAATAATAATTCCTCAAACAATCAAAGTAGAGAATGATCAGCTTGCACTTATTGCAACATTCTCAAACACAGTTAGTGGAGGCTACAAGATCCATGGCTTTCCACTTGGTAACAATAATATGAATGCATCTACTAATAATGTGAACTCAACAACTTAGAGCACTGAGAACTCCACCTAATCCCCTCTTGCTCCAAATGTGAACAGCTTCACAAATCCAATAGAAGCCTTATTGCAATGCCAAAGTCTTCTCAATCAGTTGCAATCTCATTTGTTGCATCTTCGAATCCATCCACTTCTCACATAATAGGTTCTAATCTTCCTTCTCATTAGATAATTGACTCAGGTGCTTCTATGCATATATGTTCTAAAAATCATTTTATCGATTAGTCTGTTGAATAAACAGACTTATGAAGTCAAAAGGATTTATATTGTGAGACTATTTGAAACACTTGAGCTGAAAAATGTTTTTTGTATATGTCTGATTTTTCATTCAATTAGTTGTTTGTGAGTGCTCTTACAAGGAATTTACCTATGATTGTTTAATTTTCTTCTGACTTTTGCATCATTCAGGACAAGTGTGCTTTGAAGGGGATTGACCGTGCTAAAATTCTTCGAGGATCGTACATTCTTGAATAACTAAGTGTTGCTTTTACAAGTCAGTCAATGTCTGCAGCTGTTGATCGTAAAGATTCTCTATGGCATCTAGAGATGTCCACGGGACGGGGTTGGGGATGTCACTTCCCGTCCCCACCATCGCCCCCTATTCCATTCCCCATCCCCACCAAATTTCCCACGGGGAACGGGGCAGTGATTCCCTGTGGGGATCGGGTTTCCCGCAGGAAAAAATTCT

mRNA sequence

AAAGTTGAGCTTACTATCTGCCGAAGCGAAGGAATCAGCAGCAAATATTGAAAAGCGACTGCAATTGGGTTCAAAGCTCAGTGATGTGGCCACTTGTGAGGAGGATGTTCTTGAACTCTTAAGTCTGTTCAATAAAGAAAATTATATTCTATCAGAGCACAGGGGAAAATATTGTGTAATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAGGACGAGTTACTATACTACAAATTAAAGTACAAAGCTAGCCAGGACATTTCTAACAACACTGGATTTTTTAGAGATGGGACAAGTGTGCTTTGAAGGGGATTGACCGTGCTAAAATTCTTCGAGGATCGTACATTCTTGAATAACTAAGTGTTGCTTTTACAAGTCAGTCAATGTCTGCAGCTGTTGATCGTAAAGATTCTCTATGGCATCTAGAGATGTCCACGGGACGGGGTTGGGGATGTCACTTCCCGTCCCCACCATCGCCCCCTATTCCATTCCCCATCCCCACCAAATTTCCCACGGGGAACGGGGCAGTGATTCCCTGTGGGGATCGGGTTTCCCGCAGGAAAAAATTCT

Coding sequence (CDS)

ATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAG

Protein sequence

MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT*
Homology
[Close]
BLAST of CSPI03G20170 vs. ExPASy Swiss-Prot
Match: Q7X6P3 (Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RUS1 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-27
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKES++P DML+++F VNYL+WLE+NAGI   S  +DC+PGGRL +SL+YV REF+H K
Sbjct: 511 MLKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDCKPGGRLHISLDYVRREFEHAK 570

Query: 61  YDGELAGWSTDGLIARPLTTRI 83
            D E  GW T+GLIARPL TRI
Sbjct: 571 EDSESVGWVTEGLIARPLPTRI 592

[Close]
BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A0A0L9N6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G254050 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 9.3e-46
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 66  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 125

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGWSTDGLIARPLTTRICECHVT
Sbjct: 126 YDGELAGWSTDGLIARPLTTRICECHVT 153

[Close]
BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A1S4DXZ7 (protein root UVB sensitive 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491686 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.6e-45
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 419 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 478

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGW TDGLIARPLTTRICECHVT
Sbjct: 479 YDGELAGWLTDGLIARPLTTRICECHVT 506

[Close]
BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A1S3BP56 (protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491686 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.6e-45
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 524 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 583

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGW TDGLIARPLTTRICECHVT
Sbjct: 584 YDGELAGWLTDGLIARPLTTRICECHVT 611

[Close]
BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A6J1D4K5 (protein root UVB sensitive 1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016908 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-38
Identity = 76/87 (87.36%), Postives = 80/87 (91.95%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDCRPGGRLQ+SLEYV+REF HVK
Sbjct: 504 MLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVK 563

Query: 61  YDGELAGWSTDGLIARPLTTRICECHV 88
           YDGELAGW TDGLIARPL  RI  CH+
Sbjct: 564 YDGELAGWLTDGLIARPLANRIRPCHL 590

[Close]
BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A6J1F1U0 (protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441619 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESA P DMLKA+FHVNYLHWLERNAGI ARSA+NDC+PGGRLQ+SLEYVEREF HVK
Sbjct: 523 MLKESALPKDMLKALFHVNYLHWLERNAGIEARSAANDCKPGGRLQISLEYVEREFIHVK 582

Query: 61  YDGELAGWSTDGLIARPLTTRIC 84
           YDGELAGW TDGLIARPL  RIC
Sbjct: 583 YDGELAGWLTDGLIARPLNNRIC 605

[Close]
BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_011651345.1 (protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis sativus] >KAE8650562.1 hypothetical protein Csa_009558 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 1.9e-45
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 525 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 584

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGWSTDGLIARPLTTRICECHVT
Sbjct: 585 YDGELAGWSTDGLIARPLTTRICECHVT 612

[Close]
BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_031738101.1 (protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 1.9e-45
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 506 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 565

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGWSTDGLIARPLTTRICECHVT
Sbjct: 566 YDGELAGWSTDGLIARPLTTRICECHVT 593

[Close]
BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_008449956.1 (PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 9.5e-45
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 524 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 583

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGW TDGLIARPLTTRICECHVT
Sbjct: 584 YDGELAGWLTDGLIARPLTTRICECHVT 611

[Close]
BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_016900848.1 (PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 9.5e-45
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 419 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 478

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGW TDGLIARPLTTRICECHVT
Sbjct: 479 YDGELAGWLTDGLIARPLTTRICECHVT 506

[Close]
BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_038881395.1 (protein root UVB sensitive 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 183.3 bits (464), Expect = 8.9e-43
Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDC+PGGRLQMSLEYVEREF HVK
Sbjct: 523 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCKPGGRLQMSLEYVEREFNHVK 582

Query: 61  YDGELAGWSTDGLIARPLTTRICECHV 88
           YDGELAGW TDGLIARPLT RICECHV
Sbjct: 583 YDGELAGWLTDGLIARPLTNRICECHV 609

[Close]
BLAST of CSPI03G20170 vs. TAIR 10
Match: AT3G45890.1 (Protein of unknown function, DUF647 )

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-28
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 0 

Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKES++P DML+++F VNYL+WLE+NAGI   S  +DC+PGGRL +SL+YV REF+H K
Sbjct: 511 MLKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDCKPGGRLHISLDYVRREFEHAK 570

Query: 61  YDGELAGWSTDGLIARPLTTRI 83
            D E  GW T+GLIARPL TRI
Sbjct: 571 EDSESVGWVTEGLIARPLPTRI 592

The following BLAST results are available for this feature:
BLAST of CSPI03G20170 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q7X6P31.9e-2764.63Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R... [more]
BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9N69.3e-46100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G254050 PE=3 SV=1[more]
A0A1S4DXZ74.6e-4598.86protein root UVB sensitive 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 G... [more]
A0A1S3BP564.6e-4598.86protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 G... [more]
A0A6J1D4K51.4e-3887.36protein root UVB sensitive 1, chloroplastic isoform X1 OS=Momordica charantia OX... [more]
A0A6J1F1U01.1e-3586.75protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=... [more]
BLAST of CSPI03G20170 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011651345.11.9e-45100.00protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis sativus] >KAE865... [more]
XP_031738101.11.9e-45100.00protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis sativus][more]
XP_008449956.19.5e-4598.86PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis melo][more]
XP_016900848.19.5e-4598.86PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis melo][more]
XP_038881395.18.9e-4395.40protein root UVB sensitive 1, chloroplastic [Benincasa hispida][more]
BLAST of CSPI03G20170 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G45890.11.3e-2864.63Protein of unknown function, DUF647 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12770:SF22RUS1 FAMILY PROTEIN C16ORF58coord: 1..84
IPR006968Root UVB sensitive familyPANTHERPTHR12770RUS1 FAMILY PROTEIN C16ORF58coord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI03G20170.1CSPI03G20170.1mRNA
CSPI03G20170.2CSPI03G20170.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007155 cell adhesion
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005540 hyaluronic acid binding