CSPI03G20170 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI03G20170
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein root UVB sensitive 1, chloroplastic isoform X1
Location	Chr3: 15962645 .. 15968195 (-)
RNA-Seq Expression	CSPI03G20170
Synteny	CSPI03G20170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGTTGAGCTTACTATCTGCCGAAGCGAAGGAATCAGCAGCAAATATTGAAAAGCGACTGCAATTGGGTTCAAAGCTCAGTGATGTGGCCACTTGTGAGGAGGATGTTCTTGAACTCTTAAGTCTGTTCAATAAAGAAAATTATATTCTATCAGAGCACAGGGGAAAATATTGTGTAAGTAAAATCTAAACCCATTTCATTTTAGACCTGAATAAAACTTTTCTTTGGGAAAGGCACAAAGTTGATGGAATTATTTTTCCTGCTCAATTAAATTTGCATTTGGGTTAAATTAATTTTGTTTCTTCTGATTCATTTACTAAACTGTATTTCCACTGTGTGTATTGTTTTGGATTAAGAAGCTTTCTTCTCTTAGTCCAATAGTACTTGATATGAAGCTTTACGCCCTTGTTACCCATGGATTATTAGTTTATGATTTTAGAGAATATTGCAAAAATCATCCATAAAGCAAAAAGATGGGATAGTAAAAAAAACCTCTATACACCCCCTTTTCCATTCACCATCTTTAACCATGTTTTGATGCAAGGCCTCACCAACTCCTGTCACAGAAAGGACGCACAAGAGCACACCCAAGTAATAGGGGAAATATATCTATTGAATTTCATCACAAAAATACATCAATAACCTTAGCCTAATAAGAGGGCTTTACTCTCCACAATGAACTATTGTTCATCCACATAAAATACACATAAACCTAGATAACTAACCCTAGCACAAAACACCCAATATAGACTAACATCGTTCATCCACATAAAACACACATAAACCTTGATAACTAACCCTAGCACAAAACACCCAAATATATACTAACATTTCCTAAGAACATAGGACCACAACAACTACCCTTTTGTCGGGGTGAAAACCCCTTCCTACCCCTCCTCCTATATACTTGCTTAATAGGTGGCCTTGCAATACCCTAATGGAGAAGAGTTACCTTATCCTCAAGGTGAAAATTAGGGAACTGGGCCTTAAGGACAGCGTACGATTCCCAACTTTGGACGGGAAGGATCAGACTCACAACAATAAGGGCGATAGAGTGGCCATGGTGGAGAACATGGTGAGGCATTTGGCTATCACCAAGGACACCATAACAACTGGTCACACATCCATCCATCTCCACAGCCGCAAGCCTACGCTGTTGCTGCTTCTTCATCGTCATCATCAATGGAAAACCTTCTCTGCGAGTACATGCAAAAGAATGATGCCCTTTTGTAGAGTCGGGCTGCTACCATCCGCAATCTGAGTTACAGATGGAGCAAATTGCCAGTGACATCTTCGAAAGACTAAGGGGATCCCTCCCTAACAGTACTGAAACGCCAAACCAAGTGGGGGATCGAAAAAGGATCAGTGTCAATCTGTGATGCTAAGAAACGCAAGGAACTTAACCATCCGCGAACTAGACCAAGAATAGTCAGTCTACTTCTTTGCCTAATACCACGAATGACCATTCACACAGTACTGACACTTCTCCTATTGTTTTTTCTTCAACTAATGATCTTTCTTCTTTGTAGAATGACAGTACTGAAAAACAAGAAAGTTGAGACTACCAGAGAAGATCTAAAATGCAGGCAGACGTCTAATTAGGCGTCATCATCTAATCTGTTGCCTCTCTTTTGACCCAGCATAGCCTTACTGCCACATCACTTGCGTTGCACTTCAGTTTGAAAGGTTGCGACCAATCAGGTGTGATGAGGATAAGCATTGAGGTCAATGCGTCTTTCAAAGTTTGGAACACCTAGTTGCATTTCTCATCAAACATATAGGGTTGGTTGGCGCTTAATAGGTTGCTCAATGGCTTAGCGAGCTGAGAGAAACCTCAAGTGAATCTTTTGTAAAAGCCAGCATGTCCCAAAAAGCTTCGTAAACATTTGATATCAGAAGGCGTTGGAAACTTGCTCACCACATTAATCTTCGCATGGTCTACTTCTAAGCCTGCTTGGAGAGCTTGTGCCCTAGCAAAATCCCCTCGATTATCATTAAATTACACTTTTCCTTGTTGTGTATTAAGCATGTCTTCTTCCATCTCTTCAATACCTCTTCCAAGTTGTTCAGACATTCGATATATGATTTCCAAAGATTGAGAAGTCATTCATAAAAATTTCTACTGATCTGTTTAAAAAGTCCGAAAATATTGCCATCATGCACCTTTAAAATGTCCATGGCAGATTACACAATCCAAAAGGCATGTGATGAAAAGCAAACGTGCCGCAAGGACAAGTAAATGTGGTTTTGTGCTAATCTTTGGGTGCAATAGTTATCTGATTATACCCATAATAGCCATTCAGAAAGCAATAATACTTGTTGCCTGCAAGTTGGTCCAGCATATGATCAATAAAAGACGAGGGAAAGTGGTTCTTCTTTGTTGCCACATTCAGCTTGTGGTAATCCGCCACCCAGTCACTGTTCTTGTTGGGATTAATTCATTATTCCATCGTTGCGGTCTTTAATTGATAATTTGTTGGTCGGTTGAGTAGCTTAGAAGTCATCTGTTTCTTCCATTATATTCTTTGTTGCTTTTTTTTTTCCTTGTTAATTTTATTTGAAATCTTAACATAAAATTTACAAGTTAAAGATAGAGCTATTCAACTAATCAATAGGGAATTAGTTTCATAATTTACTTGATTTCAAGATGCAATTGAATTAAATAATAATAACAATAACAAAAAATTAATAATCTTCCAATTATGTGTGGTAAGGATTCTTTGAATAACTTAATTTTTTTTATTTGCAACTGCCCAAACTAATGATAAAAAGAAGATTCTGTCTGATGAAGTCAATTTGCTAGATTAGTCAACATAGCGTTGGGTGGTTTAACAAACCAAAAACAAAATTTGATGAAAGATCCTCTTAAATAGAATTATTTGATGACGTAGACTGTGTAGTTTATAAGCATATGTTAAAAATTCCATTAAATCTTATCAATTATTTTACAAAGATAAATTGTTACATATGAAAGTGAATTGTCACAAAATATGAAGGTATGTGACCAAATGGTTGCAAATCAAAGTTCATGTTTCCATCAAAGCTCATTGACCTCAAAAAGTGATGTTTAAGCCAAACTATTATCACCAAAAGAAAGAAAAAAAAAGCTAGTTCATGGCAGAGTTACTAAACAGTCCATGCCAGAGATCCAAATCCCCAAAATAAAAGGTAGAGGGGTTATCTTCATTTCATTTGAAAGAAACACATCTAAGGCTAGAAAATCATTCTATTTGAAGTGACCAAGTATTATTTGCTAAGAGTATCACTATATAAACTCAAATCATGCTGGGAATGTTATTTTATTGTGCAGGTAATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAGGACGAGTTACTATACTACAAATTAAAGTACAAAGCTAGCCAGGACATTTCTAACAACACTGGATTTTTTAGAGATGGGTATGAAATTCATCATTTTAAAAAATTGGAACAATGAAAATATTTCAGTAGCAGTAGTAAGCTAAAAGATTATTAGTTATTGATCTGTTAGTAAAATTGTTATTATTTCAACTGTTTGTTTCTTCTTCTCACATGTATATATATTGATTGGGCATATCCCAATATAGTGAGTCATTTTTAGTTGTTTCTCTTCTAATATGGTATCAGGTGTTTAGCTTTCTACCAAACTAATCGTCCTTCAACCTTCCGACTTCGACTACAAAAATTGCCATGACTGTCGATAATCTTCAACTTGAAGCTCTAGTTCCTCTAGTTCTTCCCATGAATTCCTCAAAGACACAGAAAATGTTCATAATTCCTTTGAGACTTCTTGATCAAAGTCAAGGACACCTTAATCCTTACTATCTACAACACAATGATAACACAAGTTTGGTATTAGTTACTATGCCGTTAACTGAGGAGAACTATGTTTCTTGGAGTCGTTGGATGATGATTTGACTATATGTAGATACTCAGTTTTATGGATGGAACTCTTCCTTGTCTGAGTGATGACCTTCCTTCATGGATCAAGAATAACATTGTCATATTTTGAATCTTGAACTTAGTTTCCAAGCTTATTTTAGCTTCTTCTTTTTTTTCTTTTTTTTTCTGTTTTCTTTTTCTTTTTTTGGTTGATTTGGCAAGAAGCATTTGGTTGGATCTCAAGGAATGTTTTGAACAAAAGAATGCTCCAAGAATCTTCCAATTGAAGACATCTTTTGCAACATTAGCTTAAAATCAAGATTATGTGAGCATATGTTTTACGAGGTTAAAATCTTTATTAATGAGTTAAATTCATATCGGTCTCTTGTCCTTGTGGATGTTATCCTGGGACTCAATGAATCCTTTACTCAAGCTCGAGTTCAATTACTTTTAAATGGAGCCAATTCCTTCTATCAACTGGGCATTTTCTCTTCTTTAAGAAGAACAACAACGAGCAATAGGATCATTCTCTTTAGTCTCACCAGTTGTTTCTCTGTTGTCACTTCTAATTCTTCTAATAATAATTCCTCAAACAATCAAAGTAGAGAATGATCAGCTTGCACTTATTGCAACATTCTCAAACACAGTTAGTGGAGGCTACAAGATCCATGGCTTTCCACTTGGTAACAATAATATGAATGCATCTACTAATAATGTGAACTCAACAACTTAGAGCACTGAGAACTCCACCTAATCCCCTCTTGCTCCAAATGTGAACAGCTTCACAAATCCAATAGAAGCCTTATTGCAATGCCAAAGTCTTCTCAATCAGTTGCAATCTCATTTGTTGCATCTTCGAATCCATCCACTTCTCACATAATAGGTTCTAATCTTCCTTCTCATTAGATAATTGACTCAGGTGCTTCTATGCATATATGTTCTAAAAATCATTTTATCGATTAGTCTGTTGAATAAACAGACTTATGAAGTCAAAAGGATTTATATTGTGAGACTATTTGAAACACTTGAGCTGAAAAATGTTTTTTGTATATGTCTGATTTTTCATTCAATTAGTTGTTTGTGAGTGCTCTTACAAGGAATTTACCTATGATTGTTTAATTTTCTTCTGACTTTTGCATCATTCAGGACAAGTGTGCTTTGAAGGGGATTGACCGTGCTAAAATTCTTCGAGGATCGTACATTCTTGAATAACTAAGTGTTGCTTTTACAAGTCAGTCAATGTCTGCAGCTGTTGATCGTAAAGATTCTCTATGGCATCTAGAGATGTCCACGGGACGGGGTTGGGGATGTCACTTCCCGTCCCCACCATCGCCCCCTATTCCATTCCCCATCCCCACCAAATTTCCCACGGGGAACGGGGCAGTGATTCCCTGTGGGGATCGGGTTTCCCGCAGGAAAAAATTCT

mRNA sequence

AAAGTTGAGCTTACTATCTGCCGAAGCGAAGGAATCAGCAGCAAATATTGAAAAGCGACTGCAATTGGGTTCAAAGCTCAGTGATGTGGCCACTTGTGAGGAGGATGTTCTTGAACTCTTAAGTCTGTTCAATAAAGAAAATTATATTCTATCAGAGCACAGGGGAAAATATTGTGTAATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAGGACGAGTTACTATACTACAAATTAAAGTACAAAGCTAGCCAGGACATTTCTAACAACACTGGATTTTTTAGAGATGGGACAAGTGTGCTTTGAAGGGGATTGACCGTGCTAAAATTCTTCGAGGATCGTACATTCTTGAATAACTAAGTGTTGCTTTTACAAGTCAGTCAATGTCTGCAGCTGTTGATCGTAAAGATTCTCTATGGCATCTAGAGATGTCCACGGGACGGGGTTGGGGATGTCACTTCCCGTCCCCACCATCGCCCCCTATTCCATTCCCCATCCCCACCAAATTTCCCACGGGGAACGGGGCAGTGATTCCCTGTGGGGATCGGGTTTCCCGCAGGAAAAAATTCT

Coding sequence (CDS)

ATGCTTAAAGAAAGTGCTTCGCCTGTAGACATGCTGAAGGCAGTATTTCATGTCAATTATTTGCATTGGTTAGAGAGAAACGCTGGAATAACAGCAAGAAGTGCTTCTAATGACTGCAGACCAGGAGGAAGGCTACAAATGTCTTTGGAGTATGTGGAGAGGGAATTCAAGCATGTCAAATATGATGGGGAATTGGCTGGTTGGTCGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTGTGAATGTCATGTAACTTAG

Protein sequence

MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVKYDGELAGWSTDGLIARPLTTRICECHVT*

Homology

[Close]

BLAST of CSPI03G20170 vs. ExPASy Swiss-Prot
Match: Q7X6P3 (Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RUS1 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-27
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKES++P DML+++F VNYL+WLE+NAGI   S  +DC+PGGRL +SL+YV REF+H K
Sbjct: 511 MLKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDCKPGGRLHISLDYVRREFEHAK 570

Query: 61  YDGELAGWSTDGLIARPLTTRI 83
            D E  GW T+GLIARPL TRI
Sbjct: 571 EDSESVGWVTEGLIARPLPTRI 592

[Close]

BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A0A0L9N6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G254050 PE=3 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 9.3e-46
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 66  MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 125

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGWSTDGLIARPLTTRICECHVT
Sbjct: 126 YDGELAGWSTDGLIARPLTTRICECHVT 153

[Close]

BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A1S4DXZ7 (protein root UVB sensitive 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491686 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.6e-45
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 419 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 478

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGW TDGLIARPLTTRICECHVT
Sbjct: 479 YDGELAGWLTDGLIARPLTTRICECHVT 506

[Close]

BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A1S3BP56 (protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491686 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.6e-45
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 524 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 583

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGW TDGLIARPLTTRICECHVT
Sbjct: 584 YDGELAGWLTDGLIARPLTTRICECHVT 611

[Close]

BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A6J1D4K5 (protein root UVB sensitive 1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016908 PE=3 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.4e-38
Identity = 76/87 (87.36%), Postives = 80/87 (91.95%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDCRPGGRLQ+SLEYV+REF HVK
Sbjct: 504 MLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVK 563

Query: 61  YDGELAGWSTDGLIARPLTTRICECHV 88
           YDGELAGW TDGLIARPL  RI  CH+
Sbjct: 564 YDGELAGWLTDGLIARPLANRIRPCHL 590

[Close]

BLAST of CSPI03G20170 vs. ExPASy TrEMBL
Match: A0A6J1F1U0 (protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441619 PE=3 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.1e-35
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESA P DMLKA+FHVNYLHWLERNAGI ARSA+NDC+PGGRLQ+SLEYVEREF HVK
Sbjct: 523 MLKESALPKDMLKALFHVNYLHWLERNAGIEARSAANDCKPGGRLQISLEYVEREFIHVK 582

Query: 61  YDGELAGWSTDGLIARPLTTRIC 84
           YDGELAGW TDGLIARPL  RIC
Sbjct: 583 YDGELAGWLTDGLIARPLNNRIC 605

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_011651345.1 (protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis sativus] >KAE8650562.1 hypothetical protein Csa_009558 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 1.9e-45
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 525 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 584

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGWSTDGLIARPLTTRICECHVT
Sbjct: 585 YDGELAGWSTDGLIARPLTTRICECHVT 612

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_031738101.1 (protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 192.2 bits (487), Expect = 1.9e-45
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 506 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 565

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGWSTDGLIARPLTTRICECHVT
Sbjct: 566 YDGELAGWSTDGLIARPLTTRICECHVT 593

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_008449956.1 (PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 9.5e-45
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 524 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 583

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGW TDGLIARPLTTRICECHVT
Sbjct: 584 YDGELAGWLTDGLIARPLTTRICECHVT 611

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_016900848.1 (PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 189.9 bits (481), Expect = 9.5e-45
Identity = 87/88 (98.86%), Postives = 87/88 (98.86%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK
Sbjct: 419 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 478

Query: 61  YDGELAGWSTDGLIARPLTTRICECHVT 89
           YDGELAGW TDGLIARPLTTRICECHVT
Sbjct: 479 YDGELAGWLTDGLIARPLTTRICECHVT 506

[Close]

BLAST of CSPI03G20170 vs. NCBI nr
Match: XP_038881395.1 (protein root UVB sensitive 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 183.3 bits (464), Expect = 8.9e-43
Identity = 83/87 (95.40%), Postives = 84/87 (96.55%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDC+PGGRLQMSLEYVEREF HVK
Sbjct: 523 MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCKPGGRLQMSLEYVEREFNHVK 582

Query: 61  YDGELAGWSTDGLIARPLTTRICECHV 88
           YDGELAGW TDGLIARPLT RICECHV
Sbjct: 583 YDGELAGWLTDGLIARPLTNRICECHV 609

[Close]

BLAST of CSPI03G20170 vs. TAIR 10
Match: AT3G45890.1 (Protein of unknown function, DUF647 )

HSP 1 Score: 122.9 bits (307), Expect = 1.3e-28
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 0


Query: 1   MLKESASPVDMLKAVFHVNYLHWLERNAGITARSASNDCRPGGRLQMSLEYVEREFKHVK 60
           MLKES++P DML+++F VNYL+WLE+NAGI   S  +DC+PGGRL +SL+YV REF+H K
Sbjct: 511 MLKESSTPQDMLRSLFQVNYLYWLEKNAGIEPASTYSDCKPGGRLHISLDYVRREFEHAK 570

Query: 61  YDGELAGWSTDGLIARPLTTRI 83
            D E  GW T+GLIARPL TRI
Sbjct: 571 EDSESVGWVTEGLIARPLPTRI 592

The following BLAST results are available for this feature:

BLAST of CSPI03G20170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7X6P3	1.9e-27	64.63	Protein root UVB sensitive 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of CSPI03G20170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L9N6	9.3e-46	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G254050 PE=3 SV=1	[more]
A0A1S4DXZ7	4.6e-45	98.86	protein root UVB sensitive 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 G...	[more]
A0A1S3BP56	4.6e-45	98.86	protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1D4K5	1.4e-38	87.36	protein root UVB sensitive 1, chloroplastic isoform X1 OS=Momordica charantia OX...	[more]
A0A6J1F1U0	1.1e-35	86.75	protein root UVB sensitive 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=...	[more]

BLAST of CSPI03G20170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651345.1	1.9e-45	100.00	protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis sativus] >KAE865...	[more]
XP_031738101.1	1.9e-45	100.00	protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis sativus]	[more]
XP_008449956.1	9.5e-45	98.86	PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis melo]	[more]
XP_016900848.1	9.5e-45	98.86	PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis melo]	[more]
XP_038881395.1	8.9e-43	95.40	protein root UVB sensitive 1, chloroplastic [Benincasa hispida]	[more]

BLAST of CSPI03G20170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45890.1	1.3e-28	64.63	Protein of unknown function, DUF647	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12770:SF22	RUS1 FAMILY PROTEIN C16ORF58	coord: 1..84
IPR006968	Root UVB sensitive family	PANTHER	PTHR12770	RUS1 FAMILY PROTEIN C16ORF58	coord: 1..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI03G20170.1	CSPI03G20170.1	mRNA
CSPI03G20170.2	CSPI03G20170.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007155	cell adhesion
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005540	hyaluronic acid binding