CSPI03G20120 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGCAGATTCCGTCAATCAATAGAAACCCTTTCGAAGGAAAAAAAAGAAAAGAAAAGAATGACTGGTGCTGTACTTTTCGACTGGCCGGCGTACTCCTCGCCGGAGAAAAAAGAGCAAACAAGCTCCAAAATTCAAATTCTGTAGGAGAAGAGCAACAGCCGCGCATGGGGAAAGACGCAAAAGATTTATGGAGGAAAAAGAAAAACAGTGGCAATAAAGAATTTGAAGTTAATGCTGTTTGTTCTCCCAAAATTCCATCTGTCAACAGCTCCCTAAATGAATTAACTGCCGCCAAATCTGTAGGAGAAGAACAACAGCCGCGCGTGGGGAAAGAGGCAAAGGATTTATGGAGGAAAGAGAAAAACGGTGGCAATAAAGAATCTGATGTTAATGCTGTTTTTTTTTTCCAAAATTCCATTTGCCAACAGCTCCCTAAA ATGCAGCAGATTCCGTCAATCAATAGAAACCCTTTCGAAGGAAAAAAAAGAAAAGAAAAGAATGACTGGTGCTGTACTTTTCGACTGGCCGGCGTACTCCTCGCCGGAGAAAAAAGAGCAAACAAGCTCCAAAATTCAAATTCTGTAGGAGAAGAGCAACAGCCGCGCATGGGGAAAGACGCAAAAGATTTATGGAGGAAAAAGAAAAACAGTGGCAATAAAGAATTTGAAGTTAATGCTGTTTGTTCTCCCAAAATTCCATCTGTCAACAGCTCCCTAAATGAATTAACTGCCGCCAAATCTGTAGGAGAAGAACAACAGCCGCGCGTGGGGAAAGAGGCAAAGGATTTATGGAGGAAAGAGAAAAACGGTGGCAATAAAGAATCTGATGTTAATGCTGTTTTTTTTTTCCAAAATTCCATTTGCCAACAGCTCCCTAAA ATGCAGCAGATTCCGTCAATCAATAGAAACCCTTTCGAAGGAAAAAAAAGAAAAGAAAAGAATGACTGGTGCTGTACTTTTCGACTGGCCGGCGTACTCCTCGCCGGAGAAAAAAGAGCAAACAAGCTCCAAAATTCAAATTCTGTAGGAGAAGAGCAACAGCCGCGCATGGGGAAAGACGCAAAAGATTTATGGAGGAAAAAGAAAAACAGTGGCAATAAAGAATTTGAAGTTAATGCTGTTTGTTCTCCCAAAATTCCATCTGTCAACAGCTCCCTAAATGAATTAACTGCCGCCAAATCTGTAGGAGAAGAACAACAGCCGCGCGTGGGGAAAGAGGCAAAGGATTTATGGAGGAAAGAGAAAAACGGTGGCAATAAAGAATCTGATGTTAATGCTGTTTTTTTTTTCCAAAATTCCATTTGCCAACAGCTCCCTAAA MQQIPSINRNPFEGKKRKEKNDWCCTFRLAGVLLAGEKRANKLQNSNSVGEEQQPRMGKDAKDLWRKKKNSGNKEFEVNAVCSPKIPSVNSSLNELTAAKSVGEEQQPRVGKEAKDLWRKEKNGGNKESDVNAVFFFQNSICQQLPK Homology
BLAST of CSPI03G20120 vs. ExPASy TrEMBL
Match: A0A0A0LCB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G253530 PE=4 SV=1) HSP 1 Score: 297.7 bits (761), Expect = 2.6e-77 Identity = 145/147 (98.64%), Postives = 147/147 (100.00%), Query Frame = 0
BLAST of CSPI03G20120 vs. ExPASy TrEMBL
Match: A0A0A0L3L4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G437510 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.1e-42 Identity = 98/134 (73.13%), Postives = 106/134 (79.10%), Query Frame = 0
BLAST of CSPI03G20120 vs. ExPASy TrEMBL
Match: A0A5A7V6J4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G001420 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.5e-13 Identity = 50/93 (53.76%), Postives = 60/93 (64.52%), Query Frame = 0
BLAST of CSPI03G20120 vs. NCBI nr
Match: KAA0061455.1 (hypothetical protein E6C27_scaffold41G00110 [Cucumis melo var. makuwa] >TYK10824.1 hypothetical protein E5676_scaffold332G001420 [Cucumis melo var. makuwa]) HSP 1 Score: 85.9 bits (211), Expect = 3.2e-13 Identity = 50/93 (53.76%), Postives = 60/93 (64.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|